Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331400 | XP_013464494.1 | 96.000 | 125 | 5 | 0 | 190 | 314 | 25 | 149 | 7.68e-81 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331400 | sp|G7LCV1|KI106_MEDTR | 54.839 | 124 | 47 | 2 | 195 | 309 | 27 | 150 | 3.45e-38 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0170000 | Msa0331400 | 0.811191 | 7.922358e-51 | -8.615850e-47 |
| Msa0331400 | Msa0753400 | 0.806251 | 9.007236e-50 | -8.615850e-47 |
| Msa0331400 | Msa1013070 | 0.812098 | 5.030175e-51 | -8.615850e-47 |
| Msa0331400 | Msa1054510 | 0.805969 | 1.032502e-49 | -8.615850e-47 |
| Msa0331400 | Msa1183140 | 0.807576 | 4.724363e-50 | -8.615850e-47 |
| Msa0331400 | Msa1309760 | 0.801080 | 1.065810e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331400 | MtrunA17_Chr2g0314441 | 96.000 | 125 | 5 | 0 | 190 | 314 | 25 | 149 | 7.06e-85 | 254 |
| Msa0331400 | MtrunA17_Chr2g0314431 | 66.667 | 126 | 42 | 0 | 190 | 315 | 25 | 150 | 4.81e-55 | 178 |
| Msa0331400 | MtrunA17_Chr8g0359161 | 54.839 | 124 | 47 | 2 | 195 | 309 | 27 | 150 | 2.54e-39 | 137 |
| Msa0331400 | MtrunA17_Chr8g0359111 | 50.806 | 124 | 52 | 2 | 195 | 309 | 25 | 148 | 5.09e-36 | 129 |
| Msa0331400 | MtrunA17_Chr4g0022761 | 48.462 | 130 | 62 | 2 | 191 | 315 | 21 | 150 | 4.06e-34 | 124 |
| Msa0331400 | MtrunA17_Chr4g0022751 | 46.212 | 132 | 62 | 2 | 191 | 313 | 21 | 152 | 1.10e-33 | 122 |
| Msa0331400 | MtrunA17_Chr1g0173431 | 47.287 | 129 | 60 | 2 | 195 | 315 | 25 | 153 | 2.03e-33 | 122 |
| Msa0331400 | MtrunA17_Chr7g0269461 | 49.612 | 129 | 52 | 6 | 195 | 313 | 25 | 150 | 1.00e-31 | 117 |
| Msa0331400 | MtrunA17_Chr3g0082641 | 44.776 | 134 | 64 | 2 | 192 | 315 | 22 | 155 | 9.90e-31 | 115 |
| Msa0331400 | MtrunA17_Chr3g0082671 | 44.776 | 134 | 64 | 2 | 192 | 315 | 22 | 155 | 1.03e-30 | 115 |
| Msa0331400 | MtrunA17_Chr3g0082661 | 44.776 | 134 | 64 | 2 | 192 | 315 | 22 | 155 | 4.08e-30 | 113 |
| Msa0331400 | MtrunA17_Chr3g0082681 | 44.697 | 132 | 63 | 2 | 192 | 313 | 22 | 153 | 4.12e-30 | 113 |
| Msa0331400 | MtrunA17_Chr3g0082651 | 44.030 | 134 | 65 | 2 | 192 | 315 | 22 | 155 | 1.05e-29 | 112 |
| Msa0331400 | MtrunA17_Chr6g0481911 | 37.121 | 132 | 68 | 4 | 195 | 313 | 24 | 153 | 7.74e-16 | 75.1 |
| Msa0331400 | MtrunA17_Chr6g0481941 | 34.328 | 134 | 72 | 4 | 195 | 313 | 24 | 156 | 1.77e-13 | 68.6 |
| Msa0331400 | MtrunA17_Chr6g0482041 | 32.639 | 144 | 75 | 4 | 190 | 313 | 23 | 164 | 2.74e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0331400 | AT1G73260.1 | 29.104 | 134 | 83 | 4 | 190 | 312 | 23 | 155 | 3.09e-12 | 65.5 |
Find 102 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTCCTGTCCAGCCAATTT+TGG | 0.190316 | 2_4:-47139831 | Msa0331400:CDS |
| AGAATTGAAAAGGCTGAATT+TGG | 0.196632 | 2_4:-47137954 | Msa0331400:CDS |
| CAATCCACTGAATGGAAATT+AGG | 0.248889 | 2_4:-47138038 | Msa0331400:CDS |
| ATTGATAATTTGCAGGAAAT+TGG | 0.253655 | 2_4:-47140250 | Msa0331400:CDS |
| TAAAGAAGATAAAGTTATTA+AGG | 0.255703 | 2_4:-47138108 | Msa0331400:CDS |
| GACAGAACAGGCTCCAAAAT+TGG | 0.303138 | 2_4:+47139818 | None:intergenic |
| TTGGCCTTTCTTGTCTTCTC+TGG | 0.306720 | 2_4:-47141130 | Msa0331400:CDS |
| CTTTCAGGTTCAGAGGGTTT+AGG | 0.320232 | 2_4:+47141096 | None:intergenic |
| ATAAAGTTATTAAGGATAGT+AGG | 0.320316 | 2_4:-47138100 | Msa0331400:CDS |
| CATGGTGTCACAGAAGTATT+AGG | 0.346464 | 2_4:+47139764 | None:intergenic |
| CTGAATGGAAATTAGGTGAT+AGG | 0.351599 | 2_4:-47138031 | Msa0331400:CDS |
| CTTGTCTTCTCTGGATGCTT+CGG | 0.359608 | 2_4:-47141121 | Msa0331400:CDS |
| TGCCAACATTGATAATTTGC+AGG | 0.366942 | 2_4:-47140257 | Msa0331400:CDS |
| TACTCCAGTTCTCACCCCTT+TGG | 0.368739 | 2_4:-47139678 | Msa0331400:CDS |
| GGAAGAAGGGTTATTATAGC+TGG | 0.395294 | 2_4:-47137996 | Msa0331400:CDS |
| GGCTCCAAAATTGGCTGGAC+AGG | 0.396510 | 2_4:+47139827 | None:intergenic |
| TTTCTTGACCTACATATAAA+GGG | 0.404195 | 2_4:+47138177 | None:intergenic |
| ACCTGAGCAAAAGATCTTTC+AGG | 0.404711 | 2_4:+47141081 | None:intergenic |
| GGGAACCGATGGCCTGTCCT+TGG | 0.421792 | 2_4:-47141149 | Msa0331400:CDS |
| GCCCTCAAAGGTTGTGGATC+CGG | 0.422275 | 2_4:-47139723 | Msa0331400:CDS |
| TAAAGTTATTAAGGATAGTA+GGG | 0.425601 | 2_4:-47138099 | Msa0331400:CDS |
| CTTCTGTGACACCATGTGAT+AGG | 0.426389 | 2_4:-47139757 | Msa0331400:CDS |
| TCCGGTTACTCTGTTACGTT+GGG | 0.426992 | 2_4:-47139705 | Msa0331400:CDS |
| ACAGAAGTATTAGGAGGAGC+AGG | 0.431960 | 2_4:+47139773 | None:intergenic |
| TTCTATTTATTAAAGTGAAA+CGG | 0.433388 | 2_4:+47138210 | None:intergenic |
| GCCCAACGTAACAGAGTAAC+CGG | 0.442796 | 2_4:+47139704 | None:intergenic |
| TGAGGGGCCCTCAAAGGTTG+TGG | 0.443191 | 2_4:-47139729 | Msa0331400:CDS |
| ACTTTATCTTCTTTAGCAAA+AGG | 0.445456 | 2_4:+47138116 | None:intergenic |
| GCACAATCACCTGGCTCTAC+AGG | 0.449304 | 2_4:+47139626 | None:intergenic |
| GTCTACTCATGCTCACTTGG+AGG | 0.449907 | 2_4:-47139873 | Msa0331400:CDS |
| GAAAATACCGACCTTGGAAA+AGG | 0.452876 | 2_4:-47138158 | Msa0331400:CDS |
| ATCCGGTTACTCTGTTACGT+TGG | 0.458638 | 2_4:-47139706 | Msa0331400:CDS |
| TTCCTGCAAATTATCAATGT+TGG | 0.459006 | 2_4:+47140255 | None:intergenic |
| AAACCAGCTATAACCGATAG+TGG | 0.461139 | 2_4:-47138236 | Msa0331400:CDS |
| AACTGCTAGGCAAAGCCAAA+GGG | 0.462782 | 2_4:+47139663 | None:intergenic |
| GCAAAAGGAGTGAAAATAAC+GGG | 0.462951 | 2_4:+47138131 | None:intergenic |
| GGGATACTAAGAGTGGAAGA+AGG | 0.463968 | 2_4:-47138010 | Msa0331400:CDS |
| GATAGCCACCGTAGAGTCGC+CGG | 0.465418 | 2_4:+47141186 | None:intergenic |
| GCTTCTCTCCGGCGACTCTA+CGG | 0.467003 | 2_4:-47141194 | Msa0331400:CDS |
| ATCACCTAATTTCCATTCAG+TGG | 0.471916 | 2_4:+47138034 | None:intergenic |
| TTCACTTTAATAAATAGAAA+CGG | 0.479798 | 2_4:-47138206 | Msa0331400:CDS |
| GGTTCATGCCCTTTATATGT+AGG | 0.480125 | 2_4:-47138185 | Msa0331400:CDS |
| ATTGAAAAGGCTGAATTTGG+AGG | 0.490418 | 2_4:-47137951 | Msa0331400:intron |
| CCGAGGTTTCCTGTAGAGCC+AGG | 0.491126 | 2_4:-47139635 | Msa0331400:intron |
| AACCGGATCCACAACCTTTG+AGG | 0.493825 | 2_4:+47139721 | None:intergenic |
| GGCTATCTTCTCTTCTCCGG+TGG | 0.495943 | 2_4:-47141170 | Msa0331400:CDS |
| AAAGCCAAAGGGGTGAGAAC+TGG | 0.497464 | 2_4:+47139674 | None:intergenic |
| TCTACTCATGCTCACTTGGA+GGG | 0.498132 | 2_4:-47139872 | Msa0331400:CDS |
| TTATCAATGTTGGCAGTACT+AGG | 0.498510 | 2_4:+47140265 | None:intergenic |
| TCTTCTCCGGTGGGAACCGA+TGG | 0.498514 | 2_4:-47141160 | Msa0331400:CDS |
| TTCTGAGGAATAGACAGAAC+AGG | 0.501428 | 2_4:+47139806 | None:intergenic |
| ATTGTGTCCAGAGGTATGAT+AGG | 0.504727 | 2_4:+47140297 | None:intergenic |
| TTTGTGTACAATCCACTGAA+TGG | 0.509587 | 2_4:-47138046 | Msa0331400:CDS |
| CAACCAGTTCTTGACACAAA+AGG | 0.512949 | 2_4:-47138293 | Msa0331400:CDS |
| AAGAAATCCTATCATACCTC+TGG | 0.515368 | 2_4:-47140304 | Msa0331400:CDS |
| GAACAGGCTCCAAAATTGGC+TGG | 0.517069 | 2_4:+47139822 | None:intergenic |
| GGTCAAGAAAATACCGACCT+TGG | 0.517300 | 2_4:-47138164 | Msa0331400:CDS |
| AAAATACCGACCTTGGAAAA+GGG | 0.518502 | 2_4:-47138157 | Msa0331400:CDS |
| GGATACTAAGAGTGGAAGAA+GGG | 0.522144 | 2_4:-47138009 | Msa0331400:CDS |
| AGACAAGAAAGGCCAAGGAC+AGG | 0.523550 | 2_4:+47141137 | None:intergenic |
| TGAATGGAAATTAGGTGATA+GGG | 0.525552 | 2_4:-47138030 | Msa0331400:CDS |
| CCTCCACTATCGGTTATAGC+TGG | 0.525679 | 2_4:+47138233 | None:intergenic |
| ACCGGATCCACAACCTTTGA+GGG | 0.528862 | 2_4:+47139722 | None:intergenic |
| GACTGAGATTGTGCCGGCAC+CGG | 0.530848 | 2_4:-47139897 | Msa0331400:intron |
| AGTGAAACGGCCTCCACTAT+CGG | 0.531211 | 2_4:+47138223 | None:intergenic |
| AGCAAAAGGAGTGAAAATAA+CGG | 0.531321 | 2_4:+47138130 | None:intergenic |
| TCCTTCCTGCTGCTTCTCTC+CGG | 0.531829 | 2_4:-47141205 | Msa0331400:CDS |
| GGTGTCTACTCATGCTCACT+TGG | 0.536453 | 2_4:-47139876 | Msa0331400:CDS |
| TACTCTTTGCCACGCTCAAG+AGG | 0.536946 | 2_4:+47138266 | None:intergenic |
| GGTGGCTATCTTCTCTTCTC+CGG | 0.537866 | 2_4:-47141173 | Msa0331400:CDS |
| CTACTCATGCTCACTTGGAG+GGG | 0.542734 | 2_4:-47139871 | Msa0331400:CDS |
| GTTATTATAGCTGGAAGTGA+TGG | 0.550235 | 2_4:-47137987 | Msa0331400:CDS |
| GAACTGCTAGGCAAAGCCAA+AGG | 0.552418 | 2_4:+47139662 | None:intergenic |
| GACAGGCCATCGGTTCCCAC+CGG | 0.554073 | 2_4:+47141154 | None:intergenic |
| TGCCTAGCAGTTCTGTTCCG+AGG | 0.555670 | 2_4:-47139652 | Msa0331400:CDS |
| AAAAGATCTTTCAGGTTCAG+AGG | 0.558938 | 2_4:+47141089 | None:intergenic |
| CCCTCAAAATTCCTATCACA+TGG | 0.563747 | 2_4:+47139746 | None:intergenic |
| AAAGATCTTTCAGGTTCAGA+GGG | 0.563833 | 2_4:+47141090 | None:intergenic |
| GCATCCAGAGAAGACAAGAA+AGG | 0.564013 | 2_4:+47141126 | None:intergenic |
| GGTGATAGGGATACTAAGAG+TGG | 0.564366 | 2_4:-47138017 | Msa0331400:CDS |
| GCTATCTTCTCTTCTCCGGT+GGG | 0.564858 | 2_4:-47141169 | Msa0331400:CDS |
| GCAGGGATAGCATGCTTCTG+AGG | 0.567163 | 2_4:+47139791 | None:intergenic |
| AGAGAAGACAAGAAAGGCCA+AGG | 0.571226 | 2_4:+47141132 | None:intergenic |
| CTTTGCCACGCTCAAGAGGA+TGG | 0.581985 | 2_4:+47138270 | None:intergenic |
| GCATGAGTAGACACCGGTGC+CGG | 0.585070 | 2_4:+47139884 | None:intergenic |
| AGTCGCCGGAGAGAAGCAGC+AGG | 0.585455 | 2_4:+47141200 | None:intergenic |
| GCCGGAGAGAAGCAGCAGGA+AGG | 0.591037 | 2_4:+47141204 | None:intergenic |
| GGTGCTGCTCTATCTACCGT+TGG | 0.606259 | 2_4:-47140220 | Msa0331400:CDS |
| AATATTGACTGAGATTGTGC+CGG | 0.606802 | 2_4:-47139903 | Msa0331400:intron |
| TTGCAGGAAATTGGTCACAA+AGG | 0.613978 | 2_4:-47140241 | Msa0331400:CDS |
| AAAGGCCAAGGACAGGCCAT+CGG | 0.621032 | 2_4:+47141144 | None:intergenic |
| ATCAGATTCATTGTGTCCAG+AGG | 0.632496 | 2_4:+47140288 | None:intergenic |
| AGATTTATGAACAGCACCAA+CGG | 0.635743 | 2_4:+47140204 | None:intergenic |
| CAGAAGTATTAGGAGGAGCA+GGG | 0.636951 | 2_4:+47139774 | None:intergenic |
| AACCTCGGAACAGAACTGCT+AGG | 0.655508 | 2_4:+47139650 | None:intergenic |
| CCTGGCTCTACAGGAAACCT+CGG | 0.655553 | 2_4:+47139635 | None:intergenic |
| AAAGGCCATCCTCTTGAGCG+TGG | 0.659272 | 2_4:-47138275 | Msa0331400:CDS |
| TCTCTCCGGCGACTCTACGG+TGG | 0.674833 | 2_4:-47141191 | Msa0331400:CDS |
| GGTGTCACAGAAGTATTAGG+AGG | 0.677970 | 2_4:+47139767 | None:intergenic |
| ACTGCTAGGCAAAGCCAAAG+GGG | 0.691404 | 2_4:+47139664 | None:intergenic |
| AAGTGAGCATGAGTAGACAC+CGG | 0.698614 | 2_4:+47139878 | None:intergenic |
| CCAGCTATAACCGATAGTGG+AGG | 0.720383 | 2_4:-47138233 | Msa0331400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGAAAAAATAATACTT+TGG | + | chr2_4:47140120-47140139 | None:intergenic | 10.0% |
| !! | AATTATTAAGAGATAAAGAA+GGG | + | chr2_4:47138976-47138995 | None:intergenic | 15.0% |
| !! | TTCTATTTATTAAAGTGAAA+CGG | + | chr2_4:47140840-47140859 | None:intergenic | 15.0% |
| !! | TTCACTTTAATAAATAGAAA+CGG | - | chr2_4:47140841-47140860 | Msa0331400:intron | 15.0% |
| !! | TAAAGAAGATAAAGTTATTA+AGG | - | chr2_4:47140939-47140958 | Msa0331400:intron | 15.0% |
| !!! | TAGTTATTTTAGAATTGAAA+AGG | - | chr2_4:47141083-47141102 | Msa0331400:CDS | 15.0% |
| !! | GAATTATTAAGAGATAAAGA+AGG | + | chr2_4:47138977-47138996 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | + | chr2_4:47140154-47140173 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | - | chr2_4:47140153-47140172 | Msa0331400:intron | 20.0% |
| !! | ACTATTTATAGGATATGATA+TGG | + | chr2_4:47140593-47140612 | None:intergenic | 20.0% |
| !!! | TTGATTAATGCTTTAAATGT+TGG | + | chr2_4:47140629-47140648 | None:intergenic | 20.0% |
| !! | ATAAAGTTATTAAGGATAGT+AGG | - | chr2_4:47140947-47140966 | Msa0331400:intron | 20.0% |
| !! | TAAAGTTATTAAGGATAGTA+GGG | - | chr2_4:47140948-47140967 | Msa0331400:intron | 20.0% |
| !!! | TTGGAGGTATTTATAATATT+AGG | - | chr2_4:47141112-47141131 | Msa0331400:CDS | 20.0% |
| !! | ATTGATAATTTGCAGGAAAT+TGG | - | chr2_4:47138797-47138816 | Msa0331400:intron | 25.0% |
| ! | ATTGTCAGTTTATTTCATTG+AGG | - | chr2_4:47139932-47139951 | Msa0331400:intron | 25.0% |
| ! | GCATAGATCTATAACAAATA+AGG | + | chr2_4:47139969-47139988 | None:intergenic | 25.0% |
| ! | AAGAAATACTATAAAAGACC+TGG | + | chr2_4:47140055-47140074 | None:intergenic | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | - | chr2_4:47140144-47140163 | Msa0331400:intron | 25.0% |
| ! | AGTGATCTTAGACTTTAATT+TGG | - | chr2_4:47140524-47140543 | Msa0331400:intron | 25.0% |
| ! | TATGATATGGATATTATGTG+TGG | + | chr2_4:47140580-47140599 | None:intergenic | 25.0% |
| ! | CCATATGACTTACTATTTAT+AGG | + | chr2_4:47140604-47140623 | None:intergenic | 25.0% |
| ! | CCTATAAATAGTAAGTCATA+TGG | - | chr2_4:47140601-47140620 | Msa0331400:intron | 25.0% |
| ! | TTTGATTAATGTTGTTGACA+TGG | + | chr2_4:47140668-47140687 | None:intergenic | 25.0% |
| ! | TTTCTTGACCTACATATAAA+GGG | + | chr2_4:47140873-47140892 | None:intergenic | 25.0% |
| !! | TTTTCTTGACCTACATATAA+AGG | + | chr2_4:47140874-47140893 | None:intergenic | 25.0% |
| ! | ACTTTATCTTCTTTAGCAAA+AGG | + | chr2_4:47140934-47140953 | None:intergenic | 25.0% |
| !! | GCTTTAAGGAACAAATTAAG+TGG | - | chr2_4:47138164-47138183 | Msa0331400:CDS | 30.0% |
| GGCTTCTTTGAATTCAAATT+TGG | - | chr2_4:47138233-47138252 | Msa0331400:CDS | 30.0% | |
| TGTGTTTGAACATAATTGTG+AGG | + | chr2_4:47138353-47138372 | None:intergenic | 30.0% | |
| ACTCTATTAGAAATTGCTTC+TGG | - | chr2_4:47138428-47138447 | Msa0331400:intron | 30.0% | |
| ! | ATTAGAAATTGCTTCTGGTT+TGG | - | chr2_4:47138433-47138452 | Msa0331400:intron | 30.0% |
| !! | TTAGAAATTGCTTCTGGTTT+GGG | - | chr2_4:47138434-47138453 | Msa0331400:intron | 30.0% |
| GTGGATTCATCAATTGTTAA+TGG | + | chr2_4:47138464-47138483 | None:intergenic | 30.0% | |
| ! | TTTTCATACTGAACAGCAAT+AGG | + | chr2_4:47138590-47138609 | None:intergenic | 30.0% |
| TTCCTGCAAATTATCAATGT+TGG | + | chr2_4:47138795-47138814 | None:intergenic | 30.0% | |
| ACTATGAATCACAAATCTTC+AGG | - | chr2_4:47138890-47138909 | Msa0331400:intron | 30.0% | |
| CTATGAATCACAAATCTTCA+GGG | - | chr2_4:47138891-47138910 | Msa0331400:intron | 30.0% | |
| ! | TAATTCCTTTGACTTACTTG+TGG | - | chr2_4:47138991-47139010 | Msa0331400:intron | 30.0% |
| ACTTGTCAAACTATCATAGT+AGG | + | chr2_4:47139530-47139549 | None:intergenic | 30.0% | |
| TGAACCAACTATTCAGTATA+TGG | + | chr2_4:47139844-47139863 | None:intergenic | 30.0% | |
| AAAGAGCTTACATCAAAAGA+AGG | + | chr2_4:47140008-47140027 | None:intergenic | 30.0% | |
| ! | TGTAAGCTCTTTTGATGTTA+AGG | - | chr2_4:47140016-47140035 | Msa0331400:intron | 30.0% |
| ! | GTAAGCTCTTTTGATGTTAA+GGG | - | chr2_4:47140017-47140036 | Msa0331400:intron | 30.0% |
| ! | TCTTTTGATGTTAAGGGTTT+TGG | - | chr2_4:47140023-47140042 | Msa0331400:intron | 30.0% |
| CAAAGTATGGTTGAATAATG+TGG | - | chr2_4:47140499-47140518 | Msa0331400:intron | 30.0% | |
| !! | AGATTGTGCTAATGTTTTTG+TGG | + | chr2_4:47140728-47140747 | None:intergenic | 30.0% |
| AGCAAAAGGAGTGAAAATAA+CGG | + | chr2_4:47140920-47140939 | None:intergenic | 30.0% | |
| ! | TAAGGATAGTAGGGATTTTA+AGG | - | chr2_4:47140957-47140976 | Msa0331400:intron | 30.0% |
| TGAATGGAAATTAGGTGATA+GGG | - | chr2_4:47141017-47141036 | Msa0331400:intron | 30.0% | |
| AGAATTGAAAAGGCTGAATT+TGG | - | chr2_4:47141093-47141112 | Msa0331400:CDS | 30.0% | |
| !! | TAATATTAGGTTTTGTCCCA+CGG | - | chr2_4:47141125-47141144 | Msa0331400:CDS | 30.0% |
| ! | TCCTTTTGTAGATTTGATTG+TGG | - | chr2_4:47141156-47141175 | Msa0331400:CDS | 30.0% |
| ACCACAATCAAATCTACAAA+AGG | + | chr2_4:47141160-47141179 | None:intergenic | 30.0% | |
| !!! | AGATTTGATTGTGGTTTTGT+TGG | - | chr2_4:47141165-47141184 | Msa0331400:CDS | 30.0% |
| ! | TGAGAATGGGAAGATTTTAT+TGG | - | chr2_4:47141197-47141216 | Msa0331400:CDS | 30.0% |
| !!! | AAGATTTTATTGGCTTTGGA+TGG | - | chr2_4:47141207-47141226 | Msa0331400:CDS | 30.0% |
| !! | AAAGATCTTTCAGGTTCAGA+GGG | + | chr2_4:47137960-47137979 | None:intergenic | 35.0% |
| !! | AAAAGATCTTTCAGGTTCAG+AGG | + | chr2_4:47137961-47137980 | None:intergenic | 35.0% |
| TTTGTTCCTTAAAGCTTGAG+CGG | + | chr2_4:47138159-47138178 | None:intergenic | 35.0% | |
| GGAACAAATTAAGTGGTTTG+TGG | - | chr2_4:47138171-47138190 | Msa0331400:CDS | 35.0% | |
| TGAAGACATGAGGAAAATCT+GGG | - | chr2_4:47138262-47138281 | Msa0331400:CDS | 35.0% | |
| CAATAGAGTCTCAAAATACC+TGG | + | chr2_4:47138311-47138330 | None:intergenic | 35.0% | |
| !!! | GTATTTTGAGACTCTATTGC+TGG | - | chr2_4:47138312-47138331 | Msa0331400:intron | 35.0% |
| ! | ACTGGTTGATGTAGATCTAT+CGG | - | chr2_4:47138517-47138536 | Msa0331400:intron | 35.0% |
| ! | AGTTTTCGTAACAATTCTGG+TGG | + | chr2_4:47138690-47138709 | None:intergenic | 35.0% |
| ! | CTGAGTTTTCGTAACAATTC+TGG | + | chr2_4:47138693-47138712 | None:intergenic | 35.0% |
| AAGAAATCCTATCATACCTC+TGG | - | chr2_4:47138743-47138762 | Msa0331400:intron | 35.0% | |
| TTATCAATGTTGGCAGTACT+AGG | + | chr2_4:47138785-47138804 | None:intergenic | 35.0% | |
| ! | TGCCAACATTGATAATTTGC+AGG | - | chr2_4:47138790-47138809 | Msa0331400:intron | 35.0% |
| AGATTTATGAACAGCACCAA+CGG | + | chr2_4:47138846-47138865 | None:intergenic | 35.0% | |
| TGCTGTTCATAAATCTGATC+AGG | - | chr2_4:47138850-47138869 | Msa0331400:intron | 35.0% | |
| GCTGTTCATAAATCTGATCA+GGG | - | chr2_4:47138851-47138870 | Msa0331400:intron | 35.0% | |
| AGAATAGAGACAACATGGAT+GGG | - | chr2_4:47138915-47138934 | Msa0331400:intron | 35.0% | |
| AGATAAAGAAGGGTCTAGAT+TGG | + | chr2_4:47138966-47138985 | None:intergenic | 35.0% | |
| CACAATCTCAGTCAATATTG+AGG | + | chr2_4:47139143-47139162 | None:intergenic | 35.0% | |
| ! | AATATTGACTGAGATTGTGC+CGG | - | chr2_4:47139144-47139163 | Msa0331400:intron | 35.0% |
| ! | ACCATGTGATAGGAATTTTG+AGG | - | chr2_4:47139300-47139319 | Msa0331400:intron | 35.0% |
| ! | CCATGTGATAGGAATTTTGA+GGG | - | chr2_4:47139301-47139320 | Msa0331400:intron | 35.0% |
| ! | CATGTGATAGGAATTTTGAG+GGG | - | chr2_4:47139302-47139321 | Msa0331400:intron | 35.0% |
| CTATCATAGTAGGTAGTTAC+AGG | + | chr2_4:47139520-47139539 | None:intergenic | 35.0% | |
| !!! | GAACCAAGTTTTGGTTTGAA+GGG | + | chr2_4:47139561-47139580 | None:intergenic | 35.0% |
| !!! | TGAACCAAGTTTTGGTTTGA+AGG | + | chr2_4:47139562-47139581 | None:intergenic | 35.0% |
| GAGAATTTGCACACTCTTAA+GGG | + | chr2_4:47139617-47139636 | None:intergenic | 35.0% | |
| AGAGAATTTGCACACTCTTA+AGG | + | chr2_4:47139618-47139637 | None:intergenic | 35.0% | |
| TGCAAATTCTCTCCAAATTC+TGG | - | chr2_4:47139626-47139645 | Msa0331400:intron | 35.0% | |
| GCAAATTCTCTCCAAATTCT+GGG | - | chr2_4:47139627-47139646 | Msa0331400:intron | 35.0% | |
| CAAATTCTCTCCAAATTCTG+GGG | - | chr2_4:47139628-47139647 | Msa0331400:intron | 35.0% | |
| AAATTCTCTCCAAATTCTGG+GGG | - | chr2_4:47139629-47139648 | Msa0331400:intron | 35.0% | |
| AGATAAAAAGCAGAAGAAGC+AGG | - | chr2_4:47139738-47139757 | Msa0331400:CDS | 35.0% | |
| CAACTATTCAGTATATGGCA+AGG | + | chr2_4:47139839-47139858 | None:intergenic | 35.0% | |
| CTTGCCATATACTGAATAGT+TGG | - | chr2_4:47139837-47139856 | Msa0331400:CDS | 35.0% | |
| AAGCTACTAACTAAACATCC+AGG | + | chr2_4:47139879-47139898 | None:intergenic | 35.0% | |
| TACTATAAAAGACCTGGAGA+GGG | + | chr2_4:47140049-47140068 | None:intergenic | 35.0% | |
| ATACTATAAAAGACCTGGAG+AGG | + | chr2_4:47140050-47140069 | None:intergenic | 35.0% | |
| ATTGCACACAGATTAAGGAA+TGG | + | chr2_4:47140210-47140229 | None:intergenic | 35.0% | |
| TTCCTTAATCTGTGTGCAAT+TGG | - | chr2_4:47140210-47140229 | Msa0331400:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr2_4:47140236-47140255 | Msa0331400:CDS | 35.0% |
| CGGTGGAGATATTAAATGTT+AGG | + | chr2_4:47140553-47140572 | None:intergenic | 35.0% | |
| ATATGGATATTATGTGTGGC+AGG | + | chr2_4:47140576-47140595 | None:intergenic | 35.0% | |
| AAAGCCATATCATAAGGCTA+AGG | + | chr2_4:47140699-47140718 | None:intergenic | 35.0% | |
| CCATGAAAAGCCATATCATA+AGG | + | chr2_4:47140705-47140724 | None:intergenic | 35.0% | |
| ! | CCTTATGATATGGCTTTTCA+TGG | - | chr2_4:47140702-47140721 | Msa0331400:intron | 35.0% |
| AAAATACCGACCTTGGAAAA+GGG | - | chr2_4:47140890-47140909 | Msa0331400:intron | 35.0% | |
| GCAAAAGGAGTGAAAATAAC+GGG | + | chr2_4:47140919-47140938 | None:intergenic | 35.0% | |
| TTTGTGTACAATCCACTGAA+TGG | - | chr2_4:47141001-47141020 | Msa0331400:intron | 35.0% | |
| CAATCCACTGAATGGAAATT+AGG | - | chr2_4:47141009-47141028 | Msa0331400:intron | 35.0% | |
| ATCACCTAATTTCCATTCAG+TGG | + | chr2_4:47141016-47141035 | None:intergenic | 35.0% | |
| CTGAATGGAAATTAGGTGAT+AGG | - | chr2_4:47141016-47141035 | Msa0331400:intron | 35.0% | |
| GTTATTATAGCTGGAAGTGA+TGG | - | chr2_4:47141060-47141079 | Msa0331400:intron | 35.0% | |
| ATTGAAAAGGCTGAATTTGG+AGG | - | chr2_4:47141096-47141115 | Msa0331400:CDS | 35.0% | |
| !!! | TTTGATTGTGGTTTTGTTGG+TGG | - | chr2_4:47141168-47141187 | Msa0331400:CDS | 35.0% |
| !!! | TGGGAAGATTTTATTGGCTT+TGG | - | chr2_4:47141203-47141222 | Msa0331400:CDS | 35.0% |
| ! | ACCTGAAAGATCTTTTGCTC+AGG | - | chr2_4:47137965-47137984 | Msa0331400:CDS | 40.0% |
| ACCTGAGCAAAAGATCTTTC+AGG | + | chr2_4:47137969-47137988 | None:intergenic | 40.0% | |
| !! | TGGACCTCAGTTTTATCTGA+AGG | + | chr2_4:47137993-47138012 | None:intergenic | 40.0% |
| ACTCAAACTGACTACGAATC+TGG | - | chr2_4:47138068-47138087 | Msa0331400:CDS | 40.0% | |
| ! | GACTGTCGATTGAATCTTCA+TGG | - | chr2_4:47138098-47138117 | Msa0331400:CDS | 40.0% |
| !! | TTGGTTCTACTGAAGACATG+AGG | - | chr2_4:47138252-47138271 | Msa0331400:CDS | 40.0% |
| CTGAAGACATGAGGAAAATC+TGG | - | chr2_4:47138261-47138280 | Msa0331400:CDS | 40.0% | |
| TTCAAACACACGCACAAATC+TGG | - | chr2_4:47138363-47138382 | Msa0331400:intron | 40.0% | |
| TCAAACACACGCACAAATCT+GGG | - | chr2_4:47138364-47138383 | Msa0331400:intron | 40.0% | |
| ACAGTGCTAGTTGAAAGTGA+TGG | - | chr2_4:47138554-47138573 | Msa0331400:intron | 40.0% | |
| TTGCAATGAGCACATAACAG+TGG | + | chr2_4:47138617-47138636 | None:intergenic | 40.0% | |
| TGTGCTCATTGCAAGATCTT+AGG | - | chr2_4:47138623-47138642 | Msa0331400:intron | 40.0% | |
| GTGCTCATTGCAAGATCTTA+GGG | - | chr2_4:47138624-47138643 | Msa0331400:intron | 40.0% | |
| ! | ATTGTGTCCAGAGGTATGAT+AGG | + | chr2_4:47138753-47138772 | None:intergenic | 40.0% |
| ATCAGATTCATTGTGTCCAG+AGG | + | chr2_4:47138762-47138781 | None:intergenic | 40.0% | |
| TTGCAGGAAATTGGTCACAA+AGG | - | chr2_4:47138806-47138825 | Msa0331400:intron | 40.0% | |
| CAGAATAGAGACAACATGGA+TGG | - | chr2_4:47138914-47138933 | Msa0331400:intron | 40.0% | |
| ACTGCTACAGCTATCATACA+GGG | - | chr2_4:47138938-47138957 | Msa0331400:intron | 40.0% | |
| ! | TTCCTTTGACTTACTTGTGG+AGG | - | chr2_4:47138994-47139013 | Msa0331400:intron | 40.0% |
| ATCCTCCACAAGTAAGTCAA+AGG | + | chr2_4:47138999-47139018 | None:intergenic | 40.0% | |
| CTTACTTGTGGAGGATAATG+AGG | - | chr2_4:47139003-47139022 | Msa0331400:intron | 40.0% | |
| ! | TTCTGAGGAATAGACAGAAC+AGG | + | chr2_4:47139244-47139263 | None:intergenic | 40.0% |
| !! | CATGGTGTCACAGAAGTATT+AGG | + | chr2_4:47139286-47139305 | None:intergenic | 40.0% |
| CCCTCAAAATTCCTATCACA+TGG | + | chr2_4:47139304-47139323 | None:intergenic | 40.0% | |
| GGTTCATATCTTTGTGAACC+TGG | - | chr2_4:47139858-47139877 | Msa0331400:CDS | 40.0% | |
| AGTAGCTTCTGACATTTCTC+TGG | - | chr2_4:47139891-47139910 | Msa0331400:CDS | 40.0% | |
| AGCCAATTGCACACAGATTA+AGG | + | chr2_4:47140215-47140234 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+AGG | - | chr2_4:47140240-47140259 | Msa0331400:CDS | 40.0% |
| CTTGTTTGAGTGTGAAACGA+AGG | + | chr2_4:47140428-47140447 | None:intergenic | 40.0% | |
| CAACCATACTTTGCTTGTAC+CGG | + | chr2_4:47140455-47140474 | None:intergenic | 40.0% | |
| GGTTGAATAAACAAGTCTGC+CGG | - | chr2_4:47140470-47140489 | Msa0331400:intron | 40.0% | |
| CAACCATACTTTGCTTGTAC+CGG | + | chr2_4:47140455-47140474 | None:intergenic | 40.0% | |
| !! | CAAGCCTTAGCCTTATGATA+TGG | - | chr2_4:47140692-47140711 | Msa0331400:intron | 40.0% |
| CAACCAGTTCTTGACACAAA+AGG | - | chr2_4:47140754-47140773 | Msa0331400:intron | 40.0% | |
| AAACCAGCTATAACCGATAG+TGG | - | chr2_4:47140811-47140830 | Msa0331400:intron | 40.0% | |
| GGTTCATGCCCTTTATATGT+AGG | - | chr2_4:47140862-47140881 | Msa0331400:intron | 40.0% | |
| GAAAATACCGACCTTGGAAA+AGG | - | chr2_4:47140889-47140908 | Msa0331400:intron | 40.0% | |
| GGATACTAAGAGTGGAAGAA+GGG | - | chr2_4:47141038-47141057 | Msa0331400:intron | 40.0% | |
| GGAAGAAGGGTTATTATAGC+TGG | - | chr2_4:47141051-47141070 | Msa0331400:intron | 40.0% | |
| CAAAAGGAACATGTATCCGT+GGG | + | chr2_4:47141144-47141163 | None:intergenic | 40.0% | |
| ACAAAAGGAACATGTATCCG+TGG | + | chr2_4:47141145-47141164 | None:intergenic | 40.0% | |
| ! | TTGGTGGTTTACGTGAGAAT+GGG | - | chr2_4:47141184-47141203 | Msa0331400:CDS | 40.0% |
| AGAGAAGACAAGAAAGGCCA+AGG | + | chr2_4:47137918-47137937 | None:intergenic | 45.0% | |
| ! | TTGGCCTTTCTTGTCTTCTC+TGG | - | chr2_4:47137917-47137936 | Msa0331400:intron | 45.0% |
| GCATCCAGAGAAGACAAGAA+AGG | + | chr2_4:47137924-47137943 | None:intergenic | 45.0% | |
| CTTGTCTTCTCTGGATGCTT+CGG | - | chr2_4:47137926-47137945 | Msa0331400:intron | 45.0% | |
| !! | CTTTCAGGTTCAGAGGGTTT+AGG | + | chr2_4:47137954-47137973 | None:intergenic | 45.0% |
| GGTGCCTTCAGATAAAACTG+AGG | - | chr2_4:47137986-47138005 | Msa0331400:CDS | 45.0% | |
| TTGGAGGCAGAGTTTGAAGA+TGG | + | chr2_4:47138013-47138032 | None:intergenic | 45.0% | |
| TCAAACTCTGCCTCCAATAG+TGG | - | chr2_4:47138016-47138035 | Msa0331400:CDS | 45.0% | |
| GGTCGAATTACCCTGAACAA+AGG | - | chr2_4:47138119-47138138 | Msa0331400:CDS | 45.0% | |
| CTTAAAGCTTGAGCGGTGAA+GGG | + | chr2_4:47138152-47138171 | None:intergenic | 45.0% | |
| ACACCCCATTCCTTCAGATT+CGG | + | chr2_4:47138197-47138216 | None:intergenic | 45.0% | |
| !! | AATGGGGTGTTACTCCTCTT+GGG | - | chr2_4:47138207-47138226 | Msa0331400:CDS | 45.0% |
| CGTGTCGTCAATCTAAATCC+AGG | - | chr2_4:47138290-47138309 | Msa0331400:CDS | 45.0% | |
| CCTGAGGCAAGTGCATTAAA+CGG | + | chr2_4:47138391-47138410 | None:intergenic | 45.0% | |
| TTAGACCTCCAATACTCCTG+AGG | + | chr2_4:47138407-47138426 | None:intergenic | 45.0% | |
| GATCAGGGAATGAGTTCTCT+AGG | - | chr2_4:47138866-47138885 | Msa0331400:intron | 45.0% | |
| AGGGCAGAATAGAGACAACA+TGG | - | chr2_4:47138910-47138929 | Msa0331400:intron | 45.0% | |
| GACTGCTACAGCTATCATAC+AGG | - | chr2_4:47138937-47138956 | Msa0331400:intron | 45.0% | |
| GAGGATAATGAGGATTCTGC+TGG | - | chr2_4:47139013-47139032 | Msa0331400:intron | 45.0% | |
| TAATGAGGATTCTGCTGGAG+AGG | - | chr2_4:47139018-47139037 | Msa0331400:intron | 45.0% | |
| !! | AGAGGCAGGTTTAGTGGATT+TGG | - | chr2_4:47139036-47139055 | Msa0331400:intron | 45.0% |
| !! | AGTATTGATGCCTTGCGCAA+GGG | + | chr2_4:47139098-47139117 | None:intergenic | 45.0% |
| CAATACTGACCCTTTGACTG+AGG | - | chr2_4:47139111-47139130 | Msa0331400:intron | 45.0% | |
| AGGCAGTATCCTCAGTCAAA+GGG | + | chr2_4:47139123-47139142 | None:intergenic | 45.0% | |
| AAGTGAGCATGAGTAGACAC+CGG | + | chr2_4:47139172-47139191 | None:intergenic | 45.0% | |
| TCTACTCATGCTCACTTGGA+GGG | - | chr2_4:47139175-47139194 | Msa0331400:intron | 45.0% | |
| GACAGAACAGGCTCCAAAAT+TGG | + | chr2_4:47139232-47139251 | None:intergenic | 45.0% | |
| !! | CAGAAGTATTAGGAGGAGCA+GGG | + | chr2_4:47139276-47139295 | None:intergenic | 45.0% |
| !! | ACAGAAGTATTAGGAGGAGC+AGG | + | chr2_4:47139277-47139296 | None:intergenic | 45.0% |
| !! | GGTGTCACAGAAGTATTAGG+AGG | + | chr2_4:47139283-47139302 | None:intergenic | 45.0% |
| CTTCTGTGACACCATGTGAT+AGG | - | chr2_4:47139290-47139309 | Msa0331400:intron | 45.0% | |
| ATCCGGTTACTCTGTTACGT+TGG | - | chr2_4:47139341-47139360 | Msa0331400:intron | 45.0% | |
| TCCGGTTACTCTGTTACGTT+GGG | - | chr2_4:47139342-47139361 | Msa0331400:intron | 45.0% | |
| AACTGCTAGGCAAAGCCAAA+GGG | + | chr2_4:47139387-47139406 | None:intergenic | 45.0% | |
| GCAATATGAGCACAATCACC+TGG | + | chr2_4:47139433-47139452 | None:intergenic | 45.0% | |
| AGCTATTGACGCTAGTGTCA+AGG | - | chr2_4:47139453-47139472 | Msa0331400:intron | 45.0% | |
| GCTCCCTTCAAACCAAAACT+TGG | - | chr2_4:47139555-47139574 | Msa0331400:intron | 45.0% | |
| !! | TGGAGGCATGAACCAAGTTT+TGG | + | chr2_4:47139570-47139589 | None:intergenic | 45.0% |
| AGCTTCATTCCCCCAGAATT+TGG | + | chr2_4:47139641-47139660 | None:intergenic | 45.0% | |
| !! | CTGCTCAAAGGTTGATGTGA+TGG | + | chr2_4:47139686-47139705 | None:intergenic | 45.0% |
| ! | ACTTGGATAGTGCTGCTCAA+AGG | + | chr2_4:47139698-47139717 | None:intergenic | 45.0% |
| TTATCTGCCTTAGTGCTCTC+TGG | + | chr2_4:47139724-47139743 | None:intergenic | 45.0% | |
| AGTATATGGCAAGGCAGCTT+TGG | + | chr2_4:47139830-47139849 | None:intergenic | 45.0% | |
| TCACACTCAAACAAGTCTGC+CGG | - | chr2_4:47140433-47140452 | Msa0331400:intron | 45.0% | |
| TGGATATTATGTGTGGCAGG+CGG | + | chr2_4:47140573-47140592 | None:intergenic | 45.0% | |
| ! | TGGCCTTTTGTGTCAAGAAC+TGG | + | chr2_4:47140760-47140779 | None:intergenic | 45.0% |
| GGTCAAGAAAATACCGACCT+TGG | - | chr2_4:47140883-47140902 | Msa0331400:intron | 45.0% | |
| !! | TAACGGGTAACCCTTTTCCA+AGG | + | chr2_4:47140903-47140922 | None:intergenic | 45.0% |
| GGTGATAGGGATACTAAGAG+TGG | - | chr2_4:47141030-47141049 | Msa0331400:intron | 45.0% | |
| GGGATACTAAGAGTGGAAGA+AGG | - | chr2_4:47141037-47141056 | Msa0331400:intron | 45.0% | |
| !! | GTTGGTGGTTTACGTGAGAA+TGG | - | chr2_4:47141183-47141202 | Msa0331400:CDS | 45.0% |
| GGTGGCTATCTTCTCTTCTC+CGG | - | chr2_4:47137874-47137893 | Msa0331400:intron | 50.0% | |
| GCTATCTTCTCTTCTCCGGT+GGG | - | chr2_4:47137878-47137897 | Msa0331400:intron | 50.0% | |
| AGACAAGAAAGGCCAAGGAC+AGG | + | chr2_4:47137913-47137932 | None:intergenic | 50.0% | |
| TCTGCCTCCAATAGTGGCTA+TGG | - | chr2_4:47138022-47138041 | Msa0331400:CDS | 50.0% | |
| CTGCCTCCAATAGTGGCTAT+GGG | - | chr2_4:47138023-47138042 | Msa0331400:CDS | 50.0% | |
| TCACCCATAGCCACTATTGG+AGG | + | chr2_4:47138029-47138048 | None:intergenic | 50.0% | |
| GTGTCACCCATAGCCACTAT+TGG | + | chr2_4:47138032-47138051 | None:intergenic | 50.0% | |
| !! | GGGAGTGTCACCTTTGTTCA+GGG | + | chr2_4:47138132-47138151 | None:intergenic | 50.0% |
| !! | AGGGAGTGTCACCTTTGTTC+AGG | + | chr2_4:47138133-47138152 | None:intergenic | 50.0% |
| CCTTAAAGCTTGAGCGGTGA+AGG | + | chr2_4:47138153-47138172 | None:intergenic | 50.0% | |
| CCTTCACCGCTCAAGCTTTA+AGG | - | chr2_4:47138150-47138169 | Msa0331400:CDS | 50.0% | |
| ! | TGGTTTGTGGCCGAATCTGA+AGG | - | chr2_4:47138184-47138203 | Msa0331400:CDS | 50.0% |
| TGTGGCCGAATCTGAAGGAA+TGG | - | chr2_4:47138189-47138208 | Msa0331400:CDS | 50.0% | |
| GTGGCCGAATCTGAAGGAAT+GGG | - | chr2_4:47138190-47138209 | Msa0331400:CDS | 50.0% | |
| TGGCCGAATCTGAAGGAATG+GGG | - | chr2_4:47138191-47138210 | Msa0331400:CDS | 50.0% | |
| !! | GAATGGGGTGTTACTCCTCT+TGG | - | chr2_4:47138206-47138225 | Msa0331400:CDS | 50.0% |
| TCAAAGAAGCCTCTCCCAAG+AGG | + | chr2_4:47138224-47138243 | None:intergenic | 50.0% | |
| CCGTTTAATGCACTTGCCTC+AGG | - | chr2_4:47138388-47138407 | Msa0331400:intron | 50.0% | |
| ! | TGCACTTGCCTCAGGAGTAT+TGG | - | chr2_4:47138396-47138415 | Msa0331400:intron | 50.0% |
| !! | ACTTGCCTCAGGAGTATTGG+AGG | - | chr2_4:47138399-47138418 | Msa0331400:intron | 50.0% |
| TCCACTCTCTCACGACGATT+TGG | - | chr2_4:47138479-47138498 | Msa0331400:intron | 50.0% | |
| TGGCGTATTTGCACGCATAC+TGG | - | chr2_4:47138499-47138518 | Msa0331400:intron | 50.0% | |
| GGCACTCTATTCAGACTTGC+AGG | - | chr2_4:47138645-47138664 | Msa0331400:intron | 50.0% | |
| !! | CAGTATTGATGCCTTGCGCA+AGG | + | chr2_4:47139099-47139118 | None:intergenic | 50.0% |
| GAGGCAGTATCCTCAGTCAA+AGG | + | chr2_4:47139124-47139143 | None:intergenic | 50.0% | |
| GGTGTCTACTCATGCTCACT+TGG | - | chr2_4:47139171-47139190 | Msa0331400:intron | 50.0% | |
| GTCTACTCATGCTCACTTGG+AGG | - | chr2_4:47139174-47139193 | Msa0331400:intron | 50.0% | |
| CTACTCATGCTCACTTGGAG+GGG | - | chr2_4:47139176-47139195 | Msa0331400:intron | 50.0% | |
| ! | GTCTCCTGTCCAGCCAATTT+TGG | - | chr2_4:47139216-47139235 | Msa0331400:intron | 50.0% |
| GAACAGGCTCCAAAATTGGC+TGG | + | chr2_4:47139228-47139247 | None:intergenic | 50.0% | |
| !! | GAATTTTGAGGGGCCCTCAA+AGG | - | chr2_4:47139312-47139331 | Msa0331400:intron | 50.0% |
| ACCGGATCCACAACCTTTGA+GGG | + | chr2_4:47139328-47139347 | None:intergenic | 50.0% | |
| AACCGGATCCACAACCTTTG+AGG | + | chr2_4:47139329-47139348 | None:intergenic | 50.0% | |
| GCCCAACGTAACAGAGTAAC+CGG | + | chr2_4:47139346-47139365 | None:intergenic | 50.0% | |
| TACTCCAGTTCTCACCCCTT+TGG | - | chr2_4:47139369-47139388 | Msa0331400:intron | 50.0% | |
| AAAGCCAAAGGGGTGAGAAC+TGG | + | chr2_4:47139376-47139395 | None:intergenic | 50.0% | |
| ACTGCTAGGCAAAGCCAAAG+GGG | + | chr2_4:47139386-47139405 | None:intergenic | 50.0% | |
| GAACTGCTAGGCAAAGCCAA+AGG | + | chr2_4:47139388-47139407 | None:intergenic | 50.0% | |
| AACCTCGGAACAGAACTGCT+AGG | + | chr2_4:47139400-47139419 | None:intergenic | 50.0% | |
| CGACATAGATGGATGAGAGG+TGG | + | chr2_4:47139494-47139513 | None:intergenic | 50.0% | |
| CTGCGACATAGATGGATGAG+AGG | + | chr2_4:47139497-47139516 | None:intergenic | 50.0% | |
| GTTACAGGCTGCGACATAGA+TGG | + | chr2_4:47139505-47139524 | None:intergenic | 50.0% | |
| ! | AGAATGGAGAGAGGCTTTGG+AGG | + | chr2_4:47139587-47139606 | None:intergenic | 50.0% |
| AGCAGAATGGAGAGAGGCTT+TGG | + | chr2_4:47139590-47139609 | None:intergenic | 50.0% | |
| TCTTAAGGGCTGCAGCAGAA+TGG | + | chr2_4:47139603-47139622 | None:intergenic | 50.0% | |
| ! | ATTCTGGGGGAATGAAGCTG+CGG | - | chr2_4:47139642-47139661 | Msa0331400:CDS | 50.0% |
| TTAGTGCTCTCTGGCAGACT+TGG | + | chr2_4:47139715-47139734 | None:intergenic | 50.0% | |
| !! | AAGTCTGCCAGAGAGCACTA+AGG | - | chr2_4:47139714-47139733 | Msa0331400:CDS | 50.0% |
| !! | CCTTCTAGCTTCAACTCAGC+CGG | - | chr2_4:47139775-47139794 | Msa0331400:CDS | 50.0% |
| AATGAGGACCCGTGCTCAAA+AGG | - | chr2_4:47139798-47139817 | Msa0331400:CDS | 50.0% | |
| ATGAGGACCCGTGCTCAAAA+GGG | - | chr2_4:47139799-47139818 | Msa0331400:CDS | 50.0% | |
| !!! | TGGAGGTACCCTTTTGAGCA+CGG | + | chr2_4:47139810-47139829 | None:intergenic | 50.0% |
| ! | ATATGGCAAGGCAGCTTTGG+AGG | + | chr2_4:47139827-47139846 | None:intergenic | 50.0% |
| CTGCCGGTACAAGCAAAGTA+TGG | - | chr2_4:47140449-47140468 | Msa0331400:intron | 50.0% | |
| CTGCCGGTACAAGCAAAGTA+TGG | - | chr2_4:47140449-47140468 | Msa0331400:intron | 50.0% | |
| ATATTATGTGTGGCAGGCGG+TGG | + | chr2_4:47140570-47140589 | None:intergenic | 50.0% | |
| TACTCTTTGCCACGCTCAAG+AGG | + | chr2_4:47140784-47140803 | None:intergenic | 50.0% | |
| ! | CCTCCACTATCGGTTATAGC+TGG | + | chr2_4:47140817-47140836 | None:intergenic | 50.0% |
| ! | CCAGCTATAACCGATAGTGG+AGG | - | chr2_4:47140814-47140833 | Msa0331400:intron | 50.0% |
| AGTGAAACGGCCTCCACTAT+CGG | + | chr2_4:47140827-47140846 | None:intergenic | 50.0% | |
| ! | GGGTAACCCTTTTCCAAGGT+CGG | + | chr2_4:47140899-47140918 | None:intergenic | 50.0% |
| ! | TCCTTCCTGCTGCTTCTCTC+CGG | - | chr2_4:47137842-47137861 | Msa0331400:CDS | 55.0% |
| GGCTATCTTCTCTTCTCCGG+TGG | - | chr2_4:47137877-47137896 | Msa0331400:intron | 55.0% | |
| AAAGGCCAAGGACAGGCCAT+CGG | + | chr2_4:47137906-47137925 | None:intergenic | 55.0% | |
| !! | GGTGTTACTCCTCTTGGGAG+AGG | - | chr2_4:47138212-47138231 | Msa0331400:CDS | 55.0% |
| GCCAAATCGTCGTGAGAGAG+TGG | + | chr2_4:47138483-47138502 | None:intergenic | 55.0% | |
| !! | GGTGCTGCTCTATCTACCGT+TGG | - | chr2_4:47138827-47138846 | Msa0331400:intron | 55.0% |
| TGCTGGAGAGGCAGGTTTAG+TGG | - | chr2_4:47139030-47139049 | Msa0331400:intron | 55.0% | |
| CAAGATGCATCCCTTGCGCA+AGG | - | chr2_4:47139085-47139104 | Msa0331400:intron | 55.0% | |
| GGCTCCAAAATTGGCTGGAC+AGG | + | chr2_4:47139223-47139242 | None:intergenic | 55.0% | |
| GCAGGGATAGCATGCTTCTG+AGG | + | chr2_4:47139259-47139278 | None:intergenic | 55.0% | |
| GCCCTCAAAGGTTGTGGATC+CGG | - | chr2_4:47139324-47139343 | Msa0331400:intron | 55.0% | |
| TGCCTAGCAGTTCTGTTCCG+AGG | - | chr2_4:47139395-47139414 | Msa0331400:intron | 55.0% | |
| !! | CCTGGCTCTACAGGAAACCT+CGG | + | chr2_4:47139415-47139434 | None:intergenic | 55.0% |
| !! | GCACAATCACCTGGCTCTAC+AGG | + | chr2_4:47139424-47139443 | None:intergenic | 55.0% |
| ! | CCGGCTGAGTTGAAGCTAGA+AGG | + | chr2_4:47139778-47139797 | None:intergenic | 55.0% |
| GCTTCAACTCAGCCGGAATG+AGG | - | chr2_4:47139782-47139801 | Msa0331400:CDS | 55.0% | |
| TTGAGCACGGGTCCTCATTC+CGG | + | chr2_4:47139797-47139816 | None:intergenic | 55.0% | |
| !!! | GGAGGTACCCTTTTGAGCAC+GGG | + | chr2_4:47139809-47139828 | None:intergenic | 55.0% |
| !! | TAAGGGTTTTGGCCCTCTCC+AGG | - | chr2_4:47140034-47140053 | Msa0331400:intron | 55.0% |
| AAAGGCCATCCTCTTGAGCG+TGG | - | chr2_4:47140772-47140791 | Msa0331400:intron | 55.0% | |
| CTTTGCCACGCTCAAGAGGA+TGG | + | chr2_4:47140780-47140799 | None:intergenic | 55.0% | |
| GCTTCTCTCCGGCGACTCTA+CGG | - | chr2_4:47137853-47137872 | Msa0331400:intron | 60.0% | |
| GATAGCCACCGTAGAGTCGC+CGG | + | chr2_4:47137864-47137883 | None:intergenic | 60.0% | |
| TCTTCTCCGGTGGGAACCGA+TGG | - | chr2_4:47137887-47137906 | Msa0331400:intron | 60.0% | |
| GAGGATTCTGCTGGAGAGGC+AGG | - | chr2_4:47139022-47139041 | Msa0331400:intron | 60.0% | |
| ! | GACTGAGATTGTGCCGGCAC+CGG | - | chr2_4:47139150-47139169 | Msa0331400:intron | 60.0% |
| GCATGAGTAGACACCGGTGC+CGG | + | chr2_4:47139166-47139185 | None:intergenic | 60.0% | |
| TGAGGGGCCCTCAAAGGTTG+TGG | - | chr2_4:47139318-47139337 | Msa0331400:intron | 60.0% | |
| CCGAGGTTTCCTGTAGAGCC+AGG | - | chr2_4:47139412-47139431 | Msa0331400:intron | 60.0% | |
| GGCTGCAGCAGAATGGAGAG+AGG | + | chr2_4:47139596-47139615 | None:intergenic | 60.0% | |
| GGGGAATGAAGCTGCGGAAG+AGG | - | chr2_4:47139648-47139667 | Msa0331400:CDS | 60.0% | |
| GCCGGAGAGAAGCAGCAGGA+AGG | + | chr2_4:47137846-47137865 | None:intergenic | 65.0% | |
| AGTCGCCGGAGAGAAGCAGC+AGG | + | chr2_4:47137850-47137869 | None:intergenic | 65.0% | |
| TCTCTCCGGCGACTCTACGG+TGG | - | chr2_4:47137856-47137875 | Msa0331400:intron | 65.0% | |
| !! | GACAGGCCATCGGTTCCCAC+CGG | + | chr2_4:47137896-47137915 | None:intergenic | 65.0% |
| GGGAACCGATGGCCTGTCCT+TGG | - | chr2_4:47137898-47137917 | Msa0331400:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 47137837 | 47141232 | 47137837 | ID=Msa0331400;Name=Msa0331400 |
| chr2_4 | mRNA | 47137837 | 47141232 | 47137837 | ID=Msa0331400-mRNA-1;Parent=Msa0331400;Name=Msa0331400-mRNA-1;_AED=0.54;_eAED=0.57;_QI=0|0|0|0.6|1|1|5|0|325 |
| chr2_4 | exon | 47141083 | 47141232 | 47141083 | ID=Msa0331400-mRNA-1:exon:14249;Parent=Msa0331400-mRNA-1 |
| chr2_4 | exon | 47140216 | 47140356 | 47140216 | ID=Msa0331400-mRNA-1:exon:14248;Parent=Msa0331400-mRNA-1 |
| chr2_4 | exon | 47139636 | 47139912 | 47139636 | ID=Msa0331400-mRNA-1:exon:14247;Parent=Msa0331400-mRNA-1 |
| chr2_4 | exon | 47137952 | 47138329 | 47137952 | ID=Msa0331400-mRNA-1:exon:14246;Parent=Msa0331400-mRNA-1 |
| chr2_4 | exon | 47137837 | 47137868 | 47137837 | ID=Msa0331400-mRNA-1:exon:14245;Parent=Msa0331400-mRNA-1 |
| chr2_4 | CDS | 47141083 | 47141232 | 47141083 | ID=Msa0331400-mRNA-1:cds;Parent=Msa0331400-mRNA-1 |
| chr2_4 | CDS | 47140216 | 47140356 | 47140216 | ID=Msa0331400-mRNA-1:cds;Parent=Msa0331400-mRNA-1 |
| chr2_4 | CDS | 47139636 | 47139912 | 47139636 | ID=Msa0331400-mRNA-1:cds;Parent=Msa0331400-mRNA-1 |
| chr2_4 | CDS | 47137952 | 47138329 | 47137952 | ID=Msa0331400-mRNA-1:cds;Parent=Msa0331400-mRNA-1 |
| chr2_4 | CDS | 47137837 | 47137868 | 47137837 | ID=Msa0331400-mRNA-1:cds;Parent=Msa0331400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
