AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1013070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1013070 MtrunA17_Chr7g0224801 96.970 165 4 1 1 164 7 171 8.21e-118 330
Msa1013070 MtrunA17_Chr8g0386241 67.742 93 30 0 63 155 80 172 1.99e-44 144
Msa1013070 MtrunA17_Chr7g0248721 58.140 129 46 4 33 160 93 214 2.26e-42 140
Msa1013070 MtrunA17_Chr1g0194481 63.953 86 31 0 58 143 130 215 1.04e-34 123
Msa1013070 MtrunA17_Chr5g0418781 65.432 81 28 0 62 142 100 180 1.74e-34 122
Msa1013070 MtrunA17_Chr8g0335811 44.056 143 66 2 31 164 90 227 4.35e-34 119
Msa1013070 MtrunA17_Chr7g0270191 63.953 86 31 0 58 143 117 202 4.76e-34 121
Msa1013070 MtrunA17_Chr2g0294231 65.823 79 27 0 70 148 187 265 1.61e-33 121
Msa1013070 MtrunA17_Chr5g0418191 40.000 150 73 2 22 154 239 388 4.13e-31 115
Msa1013070 MtrunA17_Chr5g0418191 56.140 57 24 1 86 142 151 206 6.53e-16 73.9
Msa1013070 MtrunA17_Chr4g0051881 65.753 73 25 0 72 144 164 236 9.70e-31 113
Msa1013070 MtrunA17_Chr1g0150801 53.061 98 43 1 49 143 62 159 1.38e-30 108
Msa1013070 MtrunA17_Chr7g0218081 53.763 93 43 0 66 158 390 482 2.31e-30 115
Msa1013070 MtrunA17_Chr7g0218081 56.140 57 24 1 86 142 228 283 5.40e-16 74.3
Msa1013070 MtrunA17_Chr3g0129361 60.811 74 29 0 69 142 127 200 5.65e-30 108
Msa1013070 MtrunA17_Chr8g0383351 46.212 132 68 2 14 142 85 216 6.89e-30 108
Msa1013070 MtrunA17_Chr4g0042831 45.082 122 55 2 47 156 227 348 1.54e-29 111
Msa1013070 MtrunA17_Chr4g0042831 50.649 77 32 2 86 156 145 221 1.29e-16 75.9
Msa1013070 MtrunA17_Chr5g0443131 64.789 71 25 0 72 142 143 213 8.21e-29 107
Msa1013070 MtrunA17_Chr3g0079691 44.167 120 53 1 39 144 434 553 8.63e-29 111
Msa1013070 MtrunA17_Chr3g0079691 53.448 58 26 1 86 143 280 336 4.89e-16 74.7
Msa1013070 MtrunA17_Chr3g0106491 57.500 80 34 0 65 144 344 423 4.38e-28 108
Msa1013070 MtrunA17_Chr3g0106491 50.000 72 31 2 76 143 184 254 1.01e-15 73.6
Msa1013070 MtrunA17_Chr4g0004911 53.409 88 41 0 57 144 307 394 1.51e-27 107
Msa1013070 MtrunA17_Chr4g0004911 44.928 69 38 0 75 143 173 241 3.48e-15 72.0
Msa1013070 MtrunA17_Chr5g0445311 56.410 78 34 0 67 144 345 422 2.95e-27 106
Msa1013070 MtrunA17_Chr5g0445311 45.333 75 40 1 69 143 183 256 5.58e-16 74.3
Msa1013070 MtrunA17_Chr3g0101131 54.762 84 38 0 67 150 396 479 3.17e-27 106
Msa1013070 MtrunA17_Chr3g0101131 51.515 66 31 1 86 151 243 307 1.63e-16 75.9
Msa1013070 MtrunA17_Chr8g0383251 52.174 92 40 2 58 148 82 170 3.97e-27 100
Msa1013070 MtrunA17_Chr3g0129321 56.338 71 31 0 72 142 104 174 6.33e-27 100
Msa1013070 MtrunA17_Chr7g0243891 51.136 88 43 0 57 144 345 432 2.24e-26 103
Msa1013070 MtrunA17_Chr7g0243891 51.724 58 27 1 86 143 216 272 4.23e-14 68.9
Msa1013070 MtrunA17_Chr5g0432161 50.562 89 43 1 57 144 391 479 2.45e-26 103
Msa1013070 MtrunA17_Chr5g0432161 50.794 63 30 1 86 148 244 305 1.61e-14 70.1
Msa1013070 MtrunA17_Chr4g0068541 58.904 73 30 0 70 142 192 264 2.92e-26 102
Msa1013070 MtrunA17_Chr7g0249311 42.188 128 65 2 29 156 343 461 3.44e-26 103
Msa1013070 MtrunA17_Chr7g0249311 54.386 57 25 1 86 142 179 234 1.54e-15 73.2
Msa1013070 MtrunA17_Chr7g0249301 52.564 78 37 0 67 144 273 350 1.09e-24 98.2
Msa1013070 MtrunA17_Chr7g0249301 50.000 58 28 1 85 142 61 117 2.09e-13 66.6
Msa1013070 MtrunA17_Chr7g0270831 46.591 88 46 1 70 156 200 287 6.70e-24 96.3
Msa1013070 MtrunA17_Chr2g0288871 50.000 80 39 1 66 144 285 364 1.43e-23 95.9
Msa1013070 MtrunA17_Chr7g0263531 44.340 106 49 2 46 149 329 426 6.61e-23 93.6
Msa1013070 MtrunA17_Chr7g0263531 53.571 56 25 1 87 142 190 244 4.10e-14 68.9
Msa1013070 MtrunA17_Chr3g0099641 47.126 87 45 1 63 148 228 314 1.66e-22 92.8
Msa1013070 MtrunA17_Chr2g0322391 45.783 83 44 1 63 144 326 408 1.86e-22 92.8
Msa1013070 MtrunA17_Chr4g0074001 52.632 76 36 0 67 142 340 415 6.31e-22 91.3
Msa1013070 MtrunA17_Chr2g0302391 45.263 95 47 2 49 142 178 268 2.09e-21 89.4
Msa1013070 MtrunA17_Chr4g0025051 48.810 84 42 1 65 147 314 397 3.43e-21 89.4
Msa1013070 MtrunA17_Chr4g0075201 46.429 84 44 1 62 144 243 326 3.73e-21 89.0
Msa1013070 MtrunA17_Chr4g0051181 48.684 76 38 1 70 144 227 302 4.21e-21 89.0
Msa1013070 MtrunA17_Chr1g0188941 43.590 78 44 0 67 144 32 109 5.79e-21 82.8
Msa1013070 MtrunA17_Chr7g0238921 61.404 57 22 0 86 142 124 180 7.54e-21 87.0
Msa1013070 MtrunA17_Chr7g0216891 42.697 89 50 1 69 156 202 290 9.70e-21 87.8
Msa1013070 MtrunA17_Chr5g0447701 52.857 70 33 0 73 142 239 308 2.12e-20 86.3
Msa1013070 MtrunA17_Chr5g0447701 50.000 60 29 1 84 143 90 148 4.33e-13 65.9
Msa1013070 MtrunA17_Chr4g0060271 48.052 77 39 1 69 144 238 314 4.39e-20 86.3
Msa1013070 MtrunA17_Chr4g0025061 48.750 80 40 1 66 144 340 419 4.93e-20 85.9
Msa1013070 MtrunA17_Chr2g0333851 50.633 79 36 2 68 143 149 227 2.99e-19 82.4
Msa1013070 MtrunA17_Chr1g0189391 38.017 121 66 2 31 142 34 154 4.65e-19 82.0
Msa1013070 MtrunA17_Chr6g0485431 46.154 78 41 1 72 148 140 217 1.13e-18 81.3
Msa1013070 MtrunA17_Chr1g0147881 34.109 129 84 1 18 145 194 322 2.20e-18 80.5
Msa1013070 MtrunA17_Chr3g0136961 57.895 57 23 1 87 142 139 195 4.94e-18 79.0
Msa1013070 MtrunA17_Chr8g0387981 46.237 93 42 2 57 141 98 190 1.74e-17 78.2
Msa1013070 MtrunA17_Chr4g0001361 52.459 61 28 1 84 143 160 220 2.22e-17 77.4
Msa1013070 MtrunA17_Chr1g0150271 43.750 80 41 2 69 144 81 160 2.80e-17 76.3
Msa1013070 MtrunA17_Chr1g0150281 52.459 61 28 1 87 146 141 201 2.49e-16 74.3
Msa1013070 MtrunA17_Chr8g0347251 55.000 60 24 1 85 141 135 194 3.39e-16 74.3
Msa1013070 MtrunA17_Chr7g0244981 39.837 123 66 5 23 141 62 180 3.70e-16 73.6
Msa1013070 MtrunA17_Chr7g0270051 50.000 58 28 1 87 143 54 111 4.70e-16 73.2
Msa1013070 MtrunA17_Chr2g0315361 38.679 106 58 3 55 156 120 222 5.40e-16 73.6
Msa1013070 MtrunA17_Chr7g0275531 41.818 110 54 3 42 141 67 176 6.26e-16 73.6
Msa1013070 MtrunA17_Chr3g0126391 55.000 60 24 1 85 141 132 191 2.58e-15 72.0
Msa1013070 MtrunA17_Chr4g0024391 40.741 81 47 1 65 144 208 288 2.59e-15 72.4
Msa1013070 MtrunA17_Chr7g0244971 35.878 131 77 4 23 149 62 189 2.90e-15 71.2
Msa1013070 MtrunA17_Chr2g0315381 42.268 97 51 3 64 156 123 218 2.93e-15 71.6
Msa1013070 MtrunA17_Chr5g0401821 37.778 90 55 1 62 150 175 264 4.37e-15 70.5
Msa1013070 MtrunA17_Chr4g0053281 46.154 65 34 1 81 144 261 325 5.01e-15 71.2
Msa1013070 MtrunA17_Chr5g0447711 43.056 72 41 0 71 142 215 286 6.18e-15 70.5
Msa1013070 MtrunA17_Chr2g0293481 33.628 113 68 2 38 143 213 325 9.04e-15 70.9
Msa1013070 MtrunA17_Chr8g0379461 46.154 65 32 2 87 148 77 141 1.40e-14 68.9
Msa1013070 MtrunA17_Chr4g0071521 46.774 62 32 1 82 142 241 302 1.42e-14 69.7
Msa1013070 MtrunA17_Chr8g0334541 39.000 100 57 2 45 141 63 161 3.64e-14 68.2
Msa1013070 MtrunA17_Chr5g0428351 42.353 85 44 3 62 141 157 241 4.83e-14 68.2
Msa1013070 MtrunA17_Chr8g0348311 48.276 58 29 1 87 143 156 213 6.09e-14 68.2
Msa1013070 MtrunA17_Chr8g0387501 50.000 60 29 1 85 143 128 187 7.49e-14 67.4
Msa1013070 MtrunA17_Chr1g0184691 45.161 62 33 1 82 142 289 350 3.62e-13 65.9
Msa1013070 MtrunA17_Chr7g0228941 35.577 104 54 2 52 142 6 109 5.06e-13 62.4
Msa1013070 MtrunA17_Chr3g0128671 42.169 83 41 3 63 141 106 185 5.88e-13 65.1
Msa1013070 MtrunA17_Chr1g0202461 33.333 99 63 3 45 142 222 318 5.93e-13 65.5
Msa1013070 MtrunA17_Chr2g0315371 40.741 81 44 2 64 141 120 199 7.93e-13 64.7
Msa1013070 MtrunA17_Chr8g0350621 40.741 81 37 2 86 155 111 191 1.17e-12 63.9
Msa1013070 MtrunA17_Chr7g0248691 44.262 61 33 1 84 143 152 212 1.45e-12 63.9
Msa1013070 MtrunA17_Chr3g0139021 45.161 62 33 1 82 142 310 371 1.74e-12 63.9
Msa1013070 MtrunA17_Chr2g0284321 34.694 98 58 2 48 144 2 94 2.62e-12 62.4
Msa1013070 MtrunA17_Chr5g0432071 50.877 57 27 1 86 142 104 159 3.66e-12 62.0
Msa1013070 MtrunA17_Chr2g0319961 39.189 74 42 2 77 147 71 144 9.63e-12 61.2
Msa1013070 MtrunA17_Chr2g0289181 38.462 78 45 2 87 163 15 90 2.47e-11 60.1
Msa1013070 MtrunA17_Chr5g0419241 45.833 48 26 0 65 112 56 103 4.21e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1013070 AT5G13080.1 86.957 92 12 0 73 164 54 145 1.05e-57 177
Msa1013070 AT3G01970.1 78.261 92 20 0 73 164 52 143 5.28e-51 160
Msa1013070 AT5G41570.1 58.929 112 46 0 53 164 65 176 4.16e-43 141
Msa1013070 AT1G64000.1 62.376 101 38 0 62 162 90 190 1.12e-41 138
Msa1013070 AT2G46130.1 56.731 104 45 0 61 164 5 108 1.69e-41 135
Msa1013070 AT2G46130.2 52.885 104 45 1 61 164 5 104 7.04e-36 120
Msa1013070 AT1G69310.4 62.963 81 30 0 62 142 123 203 4.82e-34 121
Msa1013070 AT1G69310.2 62.963 81 30 0 62 142 123 203 4.82e-34 121
Msa1013070 AT1G69310.1 62.963 81 30 0 62 142 123 203 4.82e-34 121
Msa1013070 AT4G18170.1 64.286 84 30 0 61 144 147 230 5.78e-33 119
Msa1013070 AT2G44745.1 59.091 88 35 1 62 148 121 208 8.97e-33 116
Msa1013070 AT4G39410.1 45.385 130 64 2 40 164 172 299 3.33e-32 117
Msa1013070 AT2G47260.1 62.353 85 32 0 58 142 146 230 4.00e-32 117
Msa1013070 AT1G29860.1 59.551 89 33 1 70 155 120 208 1.27e-31 115
Msa1013070 AT5G49520.1 62.821 78 29 0 70 147 205 282 2.93e-31 116
Msa1013070 AT5G46350.1 65.753 73 25 0 72 144 169 241 3.93e-30 112
Msa1013070 AT5G07100.1 50.000 108 46 1 37 144 193 292 1.61e-28 107
Msa1013070 AT5G07100.1 46.032 63 34 0 86 148 117 179 3.55e-13 66.2
Msa1013070 AT5G07100.2 50.000 108 46 1 37 144 100 199 1.68e-28 105
Msa1013070 AT5G07100.2 46.032 63 34 0 86 148 24 86 4.86e-13 64.7
Msa1013070 AT5G07100.4 50.000 108 46 1 37 144 100 199 1.68e-28 105
Msa1013070 AT5G07100.4 46.032 63 34 0 86 148 24 86 4.86e-13 64.7
Msa1013070 AT5G07100.5 50.000 108 46 1 37 144 100 199 1.68e-28 105
Msa1013070 AT5G07100.5 46.032 63 34 0 86 148 24 86 4.86e-13 64.7
Msa1013070 AT5G07100.3 50.000 108 46 1 37 144 100 199 1.68e-28 105
Msa1013070 AT5G07100.3 46.032 63 34 0 86 148 24 86 4.86e-13 64.7
Msa1013070 AT1G69310.3 58.025 81 30 1 62 142 123 199 1.88e-28 106
Msa1013070 AT5G64810.1 50.588 85 42 0 58 142 82 166 2.30e-28 104
Msa1013070 AT4G26640.5 55.682 88 37 1 67 152 186 273 5.27e-28 107
Msa1013070 AT4G26640.5 55.000 60 26 1 84 143 33 91 1.96e-16 75.5
Msa1013070 AT4G26640.6 55.682 88 37 1 67 152 186 273 5.27e-28 107
Msa1013070 AT4G26640.6 55.000 60 26 1 84 143 33 91 1.96e-16 75.5
Msa1013070 AT4G26640.4 55.682 88 37 1 67 152 186 273 5.27e-28 107
Msa1013070 AT4G26640.4 55.000 60 26 1 84 143 33 91 1.96e-16 75.5
Msa1013070 AT4G26640.3 55.682 88 37 1 67 152 186 273 5.27e-28 107
Msa1013070 AT4G26640.3 55.000 60 26 1 84 143 33 91 1.96e-16 75.5
Msa1013070 AT4G26640.7 55.682 88 37 1 67 152 322 409 6.79e-28 108
Msa1013070 AT4G26640.7 55.000 60 26 1 84 143 169 227 1.18e-16 76.6
Msa1013070 AT2G30250.1 55.682 88 39 0 57 144 299 386 6.97e-28 107
Msa1013070 AT2G30250.1 33.803 142 75 6 13 143 89 222 1.14e-12 65.1
Msa1013070 AT4G26640.1 55.682 88 37 1 67 152 290 377 7.96e-28 108
Msa1013070 AT4G26640.1 55.000 60 26 1 84 143 137 195 1.54e-16 76.3
Msa1013070 AT4G26640.2 55.682 88 37 1 67 152 362 449 9.19e-28 108
Msa1013070 AT4G26640.2 55.000 60 26 1 84 143 209 267 1.21e-16 76.6
Msa1013070 AT3G62340.1 60.000 80 32 0 64 143 96 175 9.92e-28 104
Msa1013070 AT1G13960.1 45.528 123 61 2 23 142 346 465 3.13e-27 106
Msa1013070 AT1G13960.1 59.649 57 22 1 86 142 229 284 2.02e-16 75.9
Msa1013070 AT1G13960.2 62.500 72 27 0 71 142 241 312 3.46e-27 104
Msa1013070 AT1G13960.2 59.649 57 22 1 86 142 76 131 5.87e-16 74.3
Msa1013070 AT2G03340.1 46.429 112 59 1 33 144 363 473 3.58e-27 106
Msa1013070 AT2G03340.1 53.846 65 29 1 86 150 250 313 2.57e-16 75.5
Msa1013070 AT5G56270.1 57.692 78 33 0 67 144 468 545 3.32e-26 103
Msa1013070 AT5G56270.1 50.877 57 27 1 86 142 273 328 2.23e-14 70.1
Msa1013070 AT2G38470.1 57.692 78 33 0 67 144 343 420 4.59e-26 103
Msa1013070 AT2G38470.1 50.000 58 28 1 86 143 184 240 6.70e-13 65.9
Msa1013070 AT4G26440.1 47.273 110 55 2 36 144 323 430 4.77e-26 103
Msa1013070 AT4G26440.1 52.632 57 26 1 86 142 178 233 2.52e-15 72.8
Msa1013070 AT3G01080.2 56.410 78 34 0 67 144 325 402 6.74e-26 102
Msa1013070 AT3G01080.2 54.386 57 25 1 86 142 205 260 1.29e-14 70.9
Msa1013070 AT3G01080.1 56.410 78 34 0 67 144 287 364 6.87e-26 102
Msa1013070 AT3G01080.1 54.386 57 25 1 86 142 167 222 1.55e-14 70.5
Msa1013070 AT5G26170.1 57.143 70 30 0 73 142 100 169 1.49e-25 96.7
Msa1013070 AT4G04450.2 40.164 122 65 3 34 151 147 264 2.53e-24 97.8
Msa1013070 AT2G21900.1 43.333 90 48 1 57 143 77 166 9.88e-23 90.1
Msa1013070 AT2G04880.2 49.367 79 40 0 66 144 263 341 1.92e-22 92.8
Msa1013070 AT2G04880.2 58.333 60 24 1 84 143 109 167 3.64e-17 78.2
Msa1013070 AT2G04880.1 49.367 79 40 0 66 144 287 365 2.12e-22 92.8
Msa1013070 AT2G04880.1 58.333 60 24 1 84 143 109 167 4.01e-17 77.8
Msa1013070 AT1G68150.1 48.684 76 38 1 70 144 219 294 1.73e-21 89.7
Msa1013070 AT1G55600.1 50.649 77 38 0 67 143 288 364 7.32e-21 88.6
Msa1013070 AT4G04450.1 40.496 121 64 3 34 150 241 357 7.92e-21 88.6
Msa1013070 AT4G01720.1 50.000 76 37 1 70 144 223 298 1.42e-20 87.8
Msa1013070 AT4G30935.1 42.157 102 59 0 41 142 286 387 1.51e-20 87.8
Msa1013070 AT4G30935.1 53.125 64 26 3 87 148 169 230 9.55e-11 59.7
Msa1013070 AT5G15130.2 47.561 82 40 2 70 148 169 250 1.65e-20 87.8
Msa1013070 AT1G18860.1 46.753 77 40 1 69 144 222 298 1.71e-20 87.8
Msa1013070 AT5G15130.1 47.561 82 40 2 70 148 211 292 1.79e-20 87.4
Msa1013070 AT1G62300.1 46.988 83 43 1 63 144 289 371 2.23e-20 87.4
Msa1013070 AT4G22070.4 46.429 84 44 1 62 144 273 356 2.42e-20 87.0
Msa1013070 AT4G22070.3 46.429 84 44 1 62 144 273 356 2.42e-20 87.0
Msa1013070 AT4G22070.2 46.429 84 44 1 62 144 273 356 2.42e-20 87.0
Msa1013070 AT4G22070.1 46.429 84 44 1 62 144 273 356 2.42e-20 87.0
Msa1013070 AT2G37260.2 46.914 81 42 1 62 142 244 323 4.97e-20 85.5
Msa1013070 AT2G37260.2 55.357 56 24 1 87 142 84 138 1.60e-13 67.4
Msa1013070 AT2G37260.3 46.914 81 42 1 62 142 246 325 5.27e-20 85.5
Msa1013070 AT2G37260.3 55.357 56 24 1 87 142 86 140 1.58e-13 67.4
Msa1013070 AT2G37260.1 46.914 81 42 1 62 142 326 405 6.28e-20 85.9
Msa1013070 AT2G37260.1 55.357 56 24 1 87 142 166 220 1.48e-13 67.8
Msa1013070 AT3G56400.1 36.471 170 77 6 14 155 32 198 8.02e-20 84.0
Msa1013070 AT5G43290.1 55.932 59 26 0 84 142 112 170 9.59e-19 80.9
Msa1013070 AT1G80840.1 40.000 100 54 2 57 150 112 211 1.75e-18 80.5
Msa1013070 AT2G40750.1 46.591 88 39 2 62 141 123 210 3.79e-17 77.4
Msa1013070 AT1G69810.2 39.815 108 48 4 39 144 113 205 5.53e-17 77.0
Msa1013070 AT5G24110.1 43.011 93 44 4 57 141 80 171 5.68e-17 76.6
Msa1013070 AT1G69810.1 39.815 108 48 4 39 144 171 263 7.90e-17 76.6
Msa1013070 AT4G31800.2 52.632 57 26 1 87 142 112 168 2.52e-16 73.9
Msa1013070 AT2G25000.2 52.542 59 27 1 85 142 102 160 2.79e-16 73.6
Msa1013070 AT2G25000.4 52.542 59 27 1 85 142 102 160 2.79e-16 73.6
Msa1013070 AT4G31800.1 52.632 57 26 1 87 142 177 233 3.05e-16 74.7
Msa1013070 AT2G25000.3 54.386 57 25 1 87 142 126 182 3.57e-16 73.6
Msa1013070 AT2G25000.1 54.386 57 25 1 87 142 147 203 4.92e-16 73.6
Msa1013070 AT2G40740.1 55.932 59 23 1 86 141 173 231 6.92e-16 73.6
Msa1013070 AT2G40740.3 55.932 59 23 1 86 141 182 240 8.57e-16 73.2
Msa1013070 AT2G30590.1 46.032 63 33 1 82 143 309 371 1.86e-15 72.8
Msa1013070 AT2G46400.1 40.741 108 54 3 62 161 80 185 3.02e-15 71.6
Msa1013070 AT1G30650.1 40.659 91 46 4 60 143 186 275 3.42e-15 72.4
Msa1013070 AT5G52830.1 46.154 65 34 1 80 143 159 223 3.50e-15 72.0
Msa1013070 AT4G24240.1 42.857 77 41 2 82 155 277 353 3.84e-15 72.0
Msa1013070 AT3G01080.3 54.386 57 25 1 86 142 205 260 4.66e-15 71.6
Msa1013070 AT2G34830.1 39.560 91 47 4 60 143 184 273 5.48e-15 71.6
Msa1013070 AT4G31550.2 48.387 62 31 1 82 142 241 302 5.65e-15 71.2
Msa1013070 AT4G31550.1 48.387 62 31 1 82 142 242 303 5.69e-15 71.2
Msa1013070 AT2G34830.2 39.560 91 47 4 60 143 193 282 5.83e-15 71.6
Msa1013070 AT4G23810.1 57.627 59 22 1 86 141 158 216 6.31e-15 71.2
Msa1013070 AT2G24570.1 48.387 62 31 1 82 142 239 300 1.39e-14 70.1
Msa1013070 AT2G23320.1 44.444 63 34 1 83 144 237 299 1.68e-14 69.7
Msa1013070 AT5G28650.1 45.161 62 33 1 82 142 258 319 5.40e-14 68.6
Msa1013070 AT1G29280.1 44.444 63 34 1 87 148 75 137 7.08e-14 67.4
Msa1013070 AT3G58710.1 40.000 75 44 1 77 150 62 136 8.63e-14 67.4
Msa1013070 AT3G58710.2 40.000 75 44 1 77 150 61 135 9.18e-14 67.4
Msa1013070 AT5G45260.1 38.554 83 46 2 66 143 1186 1268 1.01e-13 68.2
Msa1013070 AT3G04670.1 45.161 62 33 1 82 142 258 319 1.71e-13 67.0
Msa1013070 AT5G45050.4 51.724 58 27 1 87 143 1042 1099 2.27e-13 67.4
Msa1013070 AT5G45050.1 51.724 58 27 1 87 143 1181 1238 2.32e-13 67.4
Msa1013070 AT5G45050.2 51.724 58 27 1 87 143 1153 1210 2.43e-13 67.4
Msa1013070 AT4G01250.1 48.276 58 29 1 87 143 129 186 2.44e-13 66.6
Msa1013070 AT4G11070.2 54.237 59 24 1 86 141 109 167 2.96e-13 66.2
Msa1013070 AT4G11070.1 54.237 59 24 1 86 141 141 199 3.46e-13 66.2
Msa1013070 AT1G66560.1 49.153 59 27 1 86 141 103 161 4.34e-13 65.5
Msa1013070 AT5G01900.1 36.937 111 56 4 61 158 84 193 6.94e-13 64.7
Msa1013070 AT4G23550.1 42.857 63 35 1 83 144 137 199 1.30e-12 64.7
Msa1013070 AT4G12020.10 50.000 58 28 1 85 142 467 523 2.56e-12 64.3
Msa1013070 AT4G12020.10 41.333 75 43 1 32 106 588 661 6.93e-12 63.2
Msa1013070 AT4G12020.4 50.000 58 28 1 85 142 467 523 2.58e-12 64.3
Msa1013070 AT4G12020.4 41.333 75 43 1 32 106 588 661 7.07e-12 63.2
Msa1013070 AT4G12020.3 50.000 58 28 1 85 142 467 523 2.61e-12 64.3
Msa1013070 AT4G12020.3 41.333 75 43 1 32 106 588 661 6.42e-12 63.2
Msa1013070 AT4G12020.2 50.000 58 28 1 85 142 467 523 2.68e-12 64.3
Msa1013070 AT4G12020.2 41.333 75 43 1 32 106 588 661 6.74e-12 63.2
Msa1013070 AT4G12020.7 50.000 58 28 1 85 142 467 523 2.78e-12 64.3
Msa1013070 AT4G12020.7 41.333 75 43 1 32 106 588 661 7.76e-12 62.8
Msa1013070 AT4G12020.6 50.000 58 28 1 85 142 467 523 2.83e-12 64.3
Msa1013070 AT4G12020.6 41.333 75 43 1 32 106 588 661 7.98e-12 62.8
Msa1013070 AT4G12020.8 50.000 58 28 1 85 142 467 523 2.83e-12 64.3
Msa1013070 AT4G12020.8 41.333 75 43 1 32 106 588 661 7.98e-12 62.8
Msa1013070 AT4G12020.1 50.000 58 28 1 85 142 467 523 2.89e-12 64.3
Msa1013070 AT4G12020.1 41.333 75 43 1 32 106 588 661 7.83e-12 62.8
Msa1013070 AT4G12020.9 50.000 58 28 1 85 142 467 523 2.89e-12 64.3
Msa1013070 AT4G12020.9 41.333 75 43 1 32 106 588 661 7.83e-12 62.8
Msa1013070 AT4G12020.5 50.000 58 28 1 85 142 400 456 3.06e-12 63.9
Msa1013070 AT4G12020.5 41.333 75 43 1 32 106 521 594 7.69e-12 62.8
Msa1013070 AT4G12020.11 50.000 58 28 1 85 142 467 523 4.34e-12 63.5
Msa1013070 AT4G12020.11 41.333 75 43 1 32 106 588 661 9.52e-12 62.8
Msa1013070 AT1G66600.1 48.333 60 28 1 85 141 102 161 1.08e-11 61.2
Msa1013070 AT1G66550.2 47.458 59 28 1 86 141 103 161 1.26e-11 61.2
Msa1013070 AT1G66550.1 47.458 59 28 1 86 141 108 166 1.44e-11 61.2

Find 36 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAACACTAATTTCATTAT+TGG 0.193844 7_1:+19037370 None:intergenic
CTTCTTCTTTCACATCTTCA+TGG 0.208635 7_1:+19037342 None:intergenic
TCAAACCACTCGTTGGAATT+TGG 0.224530 7_1:+19037432 None:intergenic
GGTTATAGATGGAGGAAATA+TGG 0.258081 7_1:-19037203 Msa1013070:CDS
CAAAGCTCAAATGCATTTCT+TGG 0.267190 7_1:-19037404 Msa1013070:CDS
TTATCAGTTGTCTTCTCAAT+AGG 0.283286 7_1:+19036130 None:intergenic
CACCACTACTCCCTCATCTT+TGG 0.284911 7_1:+19036180 None:intergenic
CTAGTTTGAAAAGCATATTT+AGG 0.304775 7_1:+19037251 None:intergenic
AAATTCAGCTATATCTAGTT+TGG 0.345982 7_1:-19035862 Msa1013070:three_prime_UTR
AAAGCTTCATATTAATCAAT+TGG 0.355166 7_1:-19036061 Msa1013070:three_prime_UTR
CAGCTATATCTAGTTTGGTT+TGG 0.394856 7_1:-19035857 Msa1013070:three_prime_UTR
TATCAGTTGTCTTCTCAATA+GGG 0.414753 7_1:+19036131 None:intergenic
GTTATAGATGGAGGAAATAT+GGG 0.449861 7_1:-19037202 Msa1013070:CDS
TACTTGATGATGGTTATAGA+TGG 0.458004 7_1:-19037214 Msa1013070:CDS
ATTCCAACGAGTGGTTTGAA+TGG 0.460500 7_1:-19037428 Msa1013070:CDS
GGAATTTGGTAGCTTGAAGA+AGG 0.478210 7_1:+19037446 None:intergenic
TACTATAGGTGCACACATCA+AGG 0.491105 7_1:-19036235 Msa1013070:CDS
CAAGTTGATATACTTGATGA+TGG 0.495665 7_1:-19037224 Msa1013070:CDS
ACACTAATTTCATTATTGGT+AGG 0.496138 7_1:+19037374 None:intergenic
AAGATGTGAAAGAAGAAGAA+GGG 0.502613 7_1:-19037337 Msa1013070:CDS
GAAGATGTGAAAGAAGAAGA+AGG 0.504088 7_1:-19037338 Msa1013070:CDS
ATGTTAATTAGATCAATTTG+AGG 0.516253 7_1:-19035998 Msa1013070:three_prime_UTR
AGCTACCAAATTCCAACGAG+TGG 0.563952 7_1:-19037437 Msa1013070:CDS
TGACCATTCAAACCACTCGT+TGG 0.583259 7_1:+19037425 None:intergenic
TTGATGATGGTTATAGATGG+AGG 0.595386 7_1:-19037211 Msa1013070:CDS
AACCAAAGATGAGGGAGTAG+TGG 0.599632 7_1:-19036182 Msa1013070:CDS
ATTTGGTAGCTTGAAGAAGG+AGG 0.610801 7_1:+19037449 None:intergenic
GCAACGGTTAACCAAAGATG+AGG 0.611921 7_1:-19036191 Msa1013070:CDS
ACTATAGGTGCACACATCAA+GGG 0.643060 7_1:-19036234 Msa1013070:CDS
TCAAATTGATCTAATTAACA+TGG 0.644083 7_1:+19036000 None:intergenic
GTAGTGGTGACAACATATGA+AGG 0.645291 7_1:-19036166 Msa1013070:CDS
ATGTAAAGAAACAAGTGCAA+CGG 0.646137 7_1:-19036207 Msa1013070:CDS
TAGCTTGAAGAAGGAGGACA+AGG 0.674996 7_1:+19037455 None:intergenic
AGGAGGACAAGGAAACAACA+TGG 0.676843 7_1:+19037466 None:intergenic
CAACGGTTAACCAAAGATGA+GGG 0.686631 7_1:-19036190 Msa1013070:CDS
AATGTTAGTATTGATCAACA+AGG 0.714922 7_1:-19037308 Msa1013070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAATAAATTGAATTAAA+GGG + chr7_1:19036372-19036391 None:intergenic 10.0%
!! TAACTAAAAAATTAATTAAG+AGG - chr7_1:19036445-19036464 Msa1013070:intron 10.0%
!!! TAAATATTTTTTTGAATAGA+TGG + chr7_1:19036735-19036754 None:intergenic 10.0%
!!! TTTAGACAATATTTTTAATT+TGG - chr7_1:19037402-19037421 Msa1013070:CDS 10.0%
!! TGAAAATAAATTGAATTAAA+GGG + chr7_1:19036372-19036391 None:intergenic 10.0%
!! TAACTAAAAAATTAATTAAG+AGG - chr7_1:19036445-19036464 Msa1013070:intron 10.0%
!!! TAAATATTTTTTTGAATAGA+TGG + chr7_1:19036735-19036754 None:intergenic 10.0%
!!! TTTAGACAATATTTTTAATT+TGG - chr7_1:19037402-19037421 Msa1013070:CDS 10.0%
!! ATTAACACTAATTTCATTAT+TGG + chr7_1:19035953-19035972 None:intergenic 15.0%
!! GTGAAAATAAATTGAATTAA+AGG + chr7_1:19036373-19036392 None:intergenic 15.0%
!! TAAAATCTACTAATGATTAA+TGG - chr7_1:19036658-19036677 Msa1013070:intron 15.0%
!!! TTTGTTTCAAAGTTTTAAAT+AGG - chr7_1:19036817-19036836 Msa1013070:intron 15.0%
!!! TTGTTTCAAAGTTTTAAATA+GGG - chr7_1:19036818-19036837 Msa1013070:intron 15.0%
!!! TTTTTTCGTTTTTAAACTAA+TGG + chr7_1:19036868-19036887 None:intergenic 15.0%
!! AGATATATAAAATGTCAAAT+AGG - chr7_1:19036974-19036993 Msa1013070:intron 15.0%
!! GATATATAAAATGTCAAATA+GGG - chr7_1:19036975-19036994 Msa1013070:intron 15.0%
!!! CATGTTTTTAACAAATATAT+TGG - chr7_1:19037030-19037049 Msa1013070:intron 15.0%
!!! CAATTTTATTTTTGTATCAA+AGG + chr7_1:19037365-19037384 None:intergenic 15.0%
!!! TTTTAATTTGGTTCTTTTAT+TGG - chr7_1:19037414-19037433 Msa1013070:CDS 15.0%
!! ATTAACACTAATTTCATTAT+TGG + chr7_1:19035953-19035972 None:intergenic 15.0%
!! GTGAAAATAAATTGAATTAA+AGG + chr7_1:19036373-19036392 None:intergenic 15.0%
!! TAAAATCTACTAATGATTAA+TGG - chr7_1:19036658-19036677 Msa1013070:intron 15.0%
!!! TTTGTTTCAAAGTTTTAAAT+AGG - chr7_1:19036817-19036836 Msa1013070:intron 15.0%
!!! TTGTTTCAAAGTTTTAAATA+GGG - chr7_1:19036818-19036837 Msa1013070:intron 15.0%
!!! TTTTTTCGTTTTTAAACTAA+TGG + chr7_1:19036868-19036887 None:intergenic 15.0%
!! AGATATATAAAATGTCAAAT+AGG - chr7_1:19036974-19036993 Msa1013070:intron 15.0%
!! GATATATAAAATGTCAAATA+GGG - chr7_1:19036975-19036994 Msa1013070:intron 15.0%
!!! CATGTTTTTAACAAATATAT+TGG - chr7_1:19037030-19037049 Msa1013070:intron 15.0%
!!! CAATTTTATTTTTGTATCAA+AGG + chr7_1:19037365-19037384 None:intergenic 15.0%
!!! TTTTAATTTGGTTCTTTTAT+TGG - chr7_1:19037414-19037433 Msa1013070:CDS 15.0%
!! TTTATATTCTACAAGTATCT+TGG - chr7_1:19036479-19036498 Msa1013070:intron 20.0%
!! CAAAATATTAACAAAACCAA+TGG + chr7_1:19037058-19037077 None:intergenic 20.0%
!!! TAATATGAAGCTTTTTAGAA+GGG + chr7_1:19037253-19037272 None:intergenic 20.0%
!!! TTAATATGAAGCTTTTTAGA+AGG + chr7_1:19037254-19037273 None:intergenic 20.0%
!! AAAGCTTCATATTAATCAAT+TGG - chr7_1:19037259-19037278 Msa1013070:CDS 20.0%
!! TCAAATTGATCTAATTAACA+TGG + chr7_1:19037323-19037342 None:intergenic 20.0%
!! ATGTTAATTAGATCAATTTG+AGG - chr7_1:19037322-19037341 Msa1013070:CDS 20.0%
!!! TTTTATTTTTGTATCAAAGG+AGG + chr7_1:19037362-19037381 None:intergenic 20.0%
!! TTTATATTCTACAAGTATCT+TGG - chr7_1:19036479-19036498 Msa1013070:intron 20.0%
!! CAAAATATTAACAAAACCAA+TGG + chr7_1:19037058-19037077 None:intergenic 20.0%
!!! TAATATGAAGCTTTTTAGAA+GGG + chr7_1:19037253-19037272 None:intergenic 20.0%
!!! TTAATATGAAGCTTTTTAGA+AGG + chr7_1:19037254-19037273 None:intergenic 20.0%
!! AAAGCTTCATATTAATCAAT+TGG - chr7_1:19037259-19037278 Msa1013070:CDS 20.0%
!! TCAAATTGATCTAATTAACA+TGG + chr7_1:19037323-19037342 None:intergenic 20.0%
!! ATGTTAATTAGATCAATTTG+AGG - chr7_1:19037322-19037341 Msa1013070:CDS 20.0%
!!! TTTTATTTTTGTATCAAAGG+AGG + chr7_1:19037362-19037381 None:intergenic 20.0%
! ACACTAATTTCATTATTGGT+AGG + chr7_1:19035949-19035968 None:intergenic 25.0%
!!! AATGTTAGTATTGATCAACA+AGG - chr7_1:19036012-19036031 Msa1013070:three_prime_UTR 25.0%
! TAAAAAGAAAGGTGAGAAAA+AGG - chr7_1:19036038-19036057 Msa1013070:three_prime_UTR 25.0%
!! CTAGTTTGAAAAGCATATTT+AGG + chr7_1:19036072-19036091 None:intergenic 25.0%
!! CTAAATATGCTTTTCAAACT+AGG - chr7_1:19036070-19036089 Msa1013070:exon 25.0%
! TTAAAAACAACAAATTTCCC+AGG - chr7_1:19036151-19036170 Msa1013070:CDS 25.0%
! TTATTATTGTTACATGTGTG+CGG - chr7_1:19036256-19036275 Msa1013070:intron 25.0%
!! TTGTGATTTATGTTCAAGTT+TGG + chr7_1:19036690-19036709 None:intergenic 25.0%
! AACTTGAACATAAATCACAA+TGG - chr7_1:19036690-19036709 Msa1013070:intron 25.0%
! ATCATCTATATCAACTACAA+TGG - chr7_1:19036755-19036774 Msa1013070:intron 25.0%
! TCATCTATATCAACTACAAT+GGG - chr7_1:19036756-19036775 Msa1013070:intron 25.0%
! ATATCTATATCAACTACGAT+TGG + chr7_1:19036960-19036979 None:intergenic 25.0%
!! TGTCAAATAGGGTTTAAAAT+AGG - chr7_1:19036986-19037005 Msa1013070:intron 25.0%
!! GTCAAATAGGGTTTAAAATA+GGG - chr7_1:19036987-19037006 Msa1013070:intron 25.0%
!!! AACAAATATATTGGTTCCAT+TGG - chr7_1:19037039-19037058 Msa1013070:intron 25.0%
!!! TGGTTTTGTTAATATTTTGC+AGG - chr7_1:19037059-19037078 Msa1013070:intron 25.0%
! AAATTCAGCTATATCTAGTT+TGG - chr7_1:19037458-19037477 Msa1013070:CDS 25.0%
! ACACTAATTTCATTATTGGT+AGG + chr7_1:19035949-19035968 None:intergenic 25.0%
!!! AATGTTAGTATTGATCAACA+AGG - chr7_1:19036012-19036031 Msa1013070:three_prime_UTR 25.0%
! TAAAAAGAAAGGTGAGAAAA+AGG - chr7_1:19036038-19036057 Msa1013070:three_prime_UTR 25.0%
!! CTAGTTTGAAAAGCATATTT+AGG + chr7_1:19036072-19036091 None:intergenic 25.0%
!! CTAAATATGCTTTTCAAACT+AGG - chr7_1:19036070-19036089 Msa1013070:exon 25.0%
! TTAAAAACAACAAATTTCCC+AGG - chr7_1:19036151-19036170 Msa1013070:CDS 25.0%
! TTATTATTGTTACATGTGTG+CGG - chr7_1:19036256-19036275 Msa1013070:intron 25.0%
!! TTGTGATTTATGTTCAAGTT+TGG + chr7_1:19036690-19036709 None:intergenic 25.0%
! AACTTGAACATAAATCACAA+TGG - chr7_1:19036690-19036709 Msa1013070:intron 25.0%
! ATCATCTATATCAACTACAA+TGG - chr7_1:19036755-19036774 Msa1013070:intron 25.0%
! TCATCTATATCAACTACAAT+GGG - chr7_1:19036756-19036775 Msa1013070:intron 25.0%
! ATATCTATATCAACTACGAT+TGG + chr7_1:19036960-19036979 None:intergenic 25.0%
!! TGTCAAATAGGGTTTAAAAT+AGG - chr7_1:19036986-19037005 Msa1013070:intron 25.0%
!! GTCAAATAGGGTTTAAAATA+GGG - chr7_1:19036987-19037006 Msa1013070:intron 25.0%
!!! AACAAATATATTGGTTCCAT+TGG - chr7_1:19037039-19037058 Msa1013070:intron 25.0%
!!! TGGTTTTGTTAATATTTTGC+AGG - chr7_1:19037059-19037078 Msa1013070:intron 25.0%
! AAATTCAGCTATATCTAGTT+TGG - chr7_1:19037458-19037477 Msa1013070:CDS 25.0%
AAGATGTGAAAGAAGAAGAA+GGG - chr7_1:19035983-19036002 Msa1013070:three_prime_UTR 30.0%
! CAACAAGGTGTTAAAAAGAA+AGG - chr7_1:19036027-19036046 Msa1013070:three_prime_UTR 30.0%
!! CAAGTTGATATACTTGATGA+TGG - chr7_1:19036096-19036115 Msa1013070:CDS 30.0%
!! TACTTGATGATGGTTATAGA+TGG - chr7_1:19036106-19036125 Msa1013070:CDS 30.0%
GTTATAGATGGAGGAAATAT+GGG - chr7_1:19036118-19036137 Msa1013070:CDS 30.0%
!!! TCCTCTTAGTCTTGAATTTT+AGG - chr7_1:19036230-19036249 Msa1013070:CDS 30.0%
ACCTAAAATTCAAGACTAAG+AGG + chr7_1:19036234-19036253 None:intergenic 30.0%
AACTGAAATATAGTACGGTA+GGG + chr7_1:19036347-19036366 None:intergenic 30.0%
TAACTGAAATATAGTACGGT+AGG + chr7_1:19036348-19036367 None:intergenic 30.0%
GGGATAACTGAAATATAGTA+CGG + chr7_1:19036352-19036371 None:intergenic 30.0%
! TGTGTCTGTCTTTTAGTATT+TGG - chr7_1:19036571-19036590 Msa1013070:intron 30.0%
GCTCATTCTTATATAAGATC+AGG - chr7_1:19036593-19036612 Msa1013070:intron 30.0%
GTCGAATGAAGATTTCATAA+TGG - chr7_1:19036924-19036943 Msa1013070:intron 30.0%
ATGTAAAGAAACAAGTGCAA+CGG - chr7_1:19037113-19037132 Msa1013070:intron 30.0%
TATCAGTTGTCTTCTCAATA+GGG + chr7_1:19037192-19037211 None:intergenic 30.0%
TTATCAGTTGTCTTCTCAAT+AGG + chr7_1:19037193-19037212 None:intergenic 30.0%
AAGATGTGAAAGAAGAAGAA+GGG - chr7_1:19035983-19036002 Msa1013070:three_prime_UTR 30.0%
! CAACAAGGTGTTAAAAAGAA+AGG - chr7_1:19036027-19036046 Msa1013070:three_prime_UTR 30.0%
!! CAAGTTGATATACTTGATGA+TGG - chr7_1:19036096-19036115 Msa1013070:CDS 30.0%
!! TACTTGATGATGGTTATAGA+TGG - chr7_1:19036106-19036125 Msa1013070:CDS 30.0%
GTTATAGATGGAGGAAATAT+GGG - chr7_1:19036118-19036137 Msa1013070:CDS 30.0%
!!! TCCTCTTAGTCTTGAATTTT+AGG - chr7_1:19036230-19036249 Msa1013070:CDS 30.0%
ACCTAAAATTCAAGACTAAG+AGG + chr7_1:19036234-19036253 None:intergenic 30.0%
AACTGAAATATAGTACGGTA+GGG + chr7_1:19036347-19036366 None:intergenic 30.0%
TAACTGAAATATAGTACGGT+AGG + chr7_1:19036348-19036367 None:intergenic 30.0%
GGGATAACTGAAATATAGTA+CGG + chr7_1:19036352-19036371 None:intergenic 30.0%
! TGTGTCTGTCTTTTAGTATT+TGG - chr7_1:19036571-19036590 Msa1013070:intron 30.0%
GCTCATTCTTATATAAGATC+AGG - chr7_1:19036593-19036612 Msa1013070:intron 30.0%
GTCGAATGAAGATTTCATAA+TGG - chr7_1:19036924-19036943 Msa1013070:intron 30.0%
ATGTAAAGAAACAAGTGCAA+CGG - chr7_1:19037113-19037132 Msa1013070:intron 30.0%
TATCAGTTGTCTTCTCAATA+GGG + chr7_1:19037192-19037211 None:intergenic 30.0%
TTATCAGTTGTCTTCTCAAT+AGG + chr7_1:19037193-19037212 None:intergenic 30.0%
CAAAGCTCAAATGCATTTCT+TGG - chr7_1:19035916-19035935 Msa1013070:three_prime_UTR 35.0%
CTTCTTCTTTCACATCTTCA+TGG + chr7_1:19035981-19036000 None:intergenic 35.0%
GAAGATGTGAAAGAAGAAGA+AGG - chr7_1:19035982-19036001 Msa1013070:three_prime_UTR 35.0%
!! TTGATGATGGTTATAGATGG+AGG - chr7_1:19036109-19036128 Msa1013070:CDS 35.0%
GGTTATAGATGGAGGAAATA+TGG - chr7_1:19036117-19036136 Msa1013070:CDS 35.0%
AAACAACAAATTTCCCAGGT+TGG - chr7_1:19036155-19036174 Msa1013070:CDS 35.0%
CAAAGAACAAAAACCAACCT+GGG + chr7_1:19036171-19036190 None:intergenic 35.0%
ACAAAGAACAAAAACCAACC+TGG + chr7_1:19036172-19036191 None:intergenic 35.0%
ACTGAAATATAGTACGGTAG+GGG + chr7_1:19036346-19036365 None:intergenic 35.0%
! TATTTTGCAGGAGCTACTAT+AGG - chr7_1:19037071-19037090 Msa1013070:intron 35.0%
! CAGCTATATCTAGTTTGGTT+TGG - chr7_1:19037463-19037482 Msa1013070:CDS 35.0%
CAAAGCTCAAATGCATTTCT+TGG - chr7_1:19035916-19035935 Msa1013070:three_prime_UTR 35.0%
CTTCTTCTTTCACATCTTCA+TGG + chr7_1:19035981-19036000 None:intergenic 35.0%
GAAGATGTGAAAGAAGAAGA+AGG - chr7_1:19035982-19036001 Msa1013070:three_prime_UTR 35.0%
!! TTGATGATGGTTATAGATGG+AGG - chr7_1:19036109-19036128 Msa1013070:CDS 35.0%
GGTTATAGATGGAGGAAATA+TGG - chr7_1:19036117-19036136 Msa1013070:CDS 35.0%
AAACAACAAATTTCCCAGGT+TGG - chr7_1:19036155-19036174 Msa1013070:CDS 35.0%
CAAAGAACAAAAACCAACCT+GGG + chr7_1:19036171-19036190 None:intergenic 35.0%
ACAAAGAACAAAAACCAACC+TGG + chr7_1:19036172-19036191 None:intergenic 35.0%
ACTGAAATATAGTACGGTAG+GGG + chr7_1:19036346-19036365 None:intergenic 35.0%
! TATTTTGCAGGAGCTACTAT+AGG - chr7_1:19037071-19037090 Msa1013070:intron 35.0%
! CAGCTATATCTAGTTTGGTT+TGG - chr7_1:19037463-19037482 Msa1013070:CDS 35.0%
! ATTTGGTAGCTTGAAGAAGG+AGG + chr7_1:19035874-19035893 None:intergenic 40.0%
! GGAATTTGGTAGCTTGAAGA+AGG + chr7_1:19035877-19035896 None:intergenic 40.0%
TCAAACCACTCGTTGGAATT+TGG + chr7_1:19035891-19035910 None:intergenic 40.0%
ATTCCAACGAGTGGTTTGAA+TGG - chr7_1:19035892-19035911 Msa1013070:three_prime_UTR 40.0%
TACTATAGGTGCACACATCA+AGG - chr7_1:19037085-19037104 Msa1013070:intron 40.0%
ACTATAGGTGCACACATCAA+GGG - chr7_1:19037086-19037105 Msa1013070:intron 40.0%
CAACGGTTAACCAAAGATGA+GGG - chr7_1:19037130-19037149 Msa1013070:intron 40.0%
GTAGTGGTGACAACATATGA+AGG - chr7_1:19037154-19037173 Msa1013070:intron 40.0%
! ATTTGGTAGCTTGAAGAAGG+AGG + chr7_1:19035874-19035893 None:intergenic 40.0%
! GGAATTTGGTAGCTTGAAGA+AGG + chr7_1:19035877-19035896 None:intergenic 40.0%
TCAAACCACTCGTTGGAATT+TGG + chr7_1:19035891-19035910 None:intergenic 40.0%
ATTCCAACGAGTGGTTTGAA+TGG - chr7_1:19035892-19035911 Msa1013070:three_prime_UTR 40.0%
TACTATAGGTGCACACATCA+AGG - chr7_1:19037085-19037104 Msa1013070:intron 40.0%
ACTATAGGTGCACACATCAA+GGG - chr7_1:19037086-19037105 Msa1013070:intron 40.0%
CAACGGTTAACCAAAGATGA+GGG - chr7_1:19037130-19037149 Msa1013070:intron 40.0%
GTAGTGGTGACAACATATGA+AGG - chr7_1:19037154-19037173 Msa1013070:intron 40.0%
TAGCTTGAAGAAGGAGGACA+AGG + chr7_1:19035868-19035887 None:intergenic 45.0%
AGCTACCAAATTCCAACGAG+TGG - chr7_1:19035883-19035902 Msa1013070:three_prime_UTR 45.0%
TGACCATTCAAACCACTCGT+TGG + chr7_1:19035898-19035917 None:intergenic 45.0%
GCAACGGTTAACCAAAGATG+AGG - chr7_1:19037129-19037148 Msa1013070:intron 45.0%
AACCAAAGATGAGGGAGTAG+TGG - chr7_1:19037138-19037157 Msa1013070:intron 45.0%
TAGCTTGAAGAAGGAGGACA+AGG + chr7_1:19035868-19035887 None:intergenic 45.0%
AGCTACCAAATTCCAACGAG+TGG - chr7_1:19035883-19035902 Msa1013070:three_prime_UTR 45.0%
TGACCATTCAAACCACTCGT+TGG + chr7_1:19035898-19035917 None:intergenic 45.0%
GCAACGGTTAACCAAAGATG+AGG - chr7_1:19037129-19037148 Msa1013070:intron 45.0%
AACCAAAGATGAGGGAGTAG+TGG - chr7_1:19037138-19037157 Msa1013070:intron 45.0%
!!! GTTTAAAATATAATTTAAAT+TGG - chr7_1:19036840-19036859 Msa1013070:intron 5.0%
!!! GTTTAAAATATAATTTAAAT+TGG - chr7_1:19036840-19036859 Msa1013070:intron 5.0%
TGCGGCTGCTAAGTTTGACT+AGG - chr7_1:19036274-19036293 Msa1013070:intron 50.0%
CACCACTACTCCCTCATCTT+TGG + chr7_1:19037143-19037162 None:intergenic 50.0%
TGCGGCTGCTAAGTTTGACT+AGG - chr7_1:19036274-19036293 Msa1013070:intron 50.0%
CACCACTACTCCCTCATCTT+TGG + chr7_1:19037143-19037162 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 19035856 19037486 19035856 ID=Msa1013070;Name=Msa1013070
chr7_1 mRNA 19035856 19037486 19035856 ID=Msa1013070-mRNA-1;Parent=Msa1013070;Name=Msa1013070-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0.5|1|1|1|2|228|164
chr7_1 exon 19035856 19036261 19035856 ID=Msa1013070-mRNA-1:exon:4690;Parent=Msa1013070-mRNA-1
chr7_1 exon 19037170 19037486 19037170 ID=Msa1013070-mRNA-1:exon:4689;Parent=Msa1013070-mRNA-1
chr7_1 CDS 19037170 19037486 19037170 ID=Msa1013070-mRNA-1:cds;Parent=Msa1013070-mRNA-1
chr7_1 CDS 19036084 19036261 19036084 ID=Msa1013070-mRNA-1:cds;Parent=Msa1013070-mRNA-1
chr7_1 three_prime_UTR 19035856 19036083 19035856 ID=Msa1013070-mRNA-1:three_prime_utr;Parent=Msa1013070-mRNA-1
Gene Sequence

>Msa1013070

ATGTTGTTTCCTTGTCCTCCTTCTTCAAGCTACCAAATTCCAACGAGTGGTTTGAATGGTCAAAGCTCAAATGCATTTCTTGGTTTGAAACCTACCAATAATGAAATTAGTGTTAATCATGACCATGAAGATGTGAAAGAAGAAGAAGGGAGTGTTAATGTTAGTATTGATCAACAAGGTGTTAAAAAGAAAGGTGAGAAAAAGGCTAAGAAGCCTAAATATGCTTTTCAAACTAGGAGTCAAGTTGATATACTTGATGATGGTTATAGATGGAGGAAATATGGGCAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTACTATAGGTGCACACATCAAGGGTGCAATGTAAAGAAACAAGTGCAACGGTTAACCAAAGATGAGGGAGTAGTGGTGACAACATATGAAGGAGTGCATACTCACCCTATTGAGAAGACAACTGATAACTTTGAGCATATTTTGAGTCAGATGCAAATATACACTCCCTTCTAA
Protein sequence

>Msa1013070

MLFPCPPSSSYQIPTSGLNGQSSNAFLGLKPTNNEISVNHDHEDVKEEEGSVNVSIDQQGVKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF*