Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753400 | AES94086.2 | 100.000 | 270 | 0 | 0 | 1 | 270 | 33 | 302 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753400 | sp|Q54KJ8|T2EB_DICDI | 26.442 | 208 | 139 | 6 | 56 | 260 | 63 | 259 | 1.76e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753400 | G7KDE8 | 100.000 | 270 | 0 | 0 | 1 | 270 | 33 | 302 | 0.0 | 556 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090970 | Msa0753400 | 0.800911 | 1.154042e-48 | -8.615850e-47 |
| Msa0753400 | Msa0795340 | 0.825572 | 4.358280e-54 | -8.615850e-47 |
| Msa0753400 | Msa0810440 | 0.820315 | 7.319901e-53 | -8.615850e-47 |
| Msa0753400 | Msa0817710 | 0.817147 | 3.834202e-52 | -8.615850e-47 |
| Msa0753400 | Msa0832620 | 0.883420 | 4.557091e-71 | -8.615850e-47 |
| Msa0753400 | Msa1068380 | 0.821168 | 4.659288e-53 | -8.615850e-47 |
| Msa0753400 | Msa1070540 | 0.807187 | 5.712394e-50 | -8.615850e-47 |
| Msa0753400 | Msa1101240 | 0.803216 | 3.875873e-49 | -8.615850e-47 |
| Msa0753400 | Msa1183140 | 0.816703 | 4.824253e-52 | -8.615850e-47 |
| Msa0753400 | Msa1272010 | 0.803213 | 3.880207e-49 | -8.615850e-47 |
| Msa0753400 | Msa1309760 | 0.819957 | 8.839114e-53 | -8.615850e-47 |
| Msa0753400 | Msa1358090 | 0.879067 | 1.685992e-69 | -8.615850e-47 |
| Msa0183450 | Msa0753400 | 0.800865 | 1.179470e-48 | -8.615850e-47 |
| Msa0331400 | Msa0753400 | 0.806251 | 9.007236e-50 | -8.615850e-47 |
| Msa0519160 | Msa0753400 | 0.813451 | 2.543019e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753400 | MtrunA17_Chr5g0397801 | 100.000 | 270 | 0 | 0 | 1 | 270 | 1 | 270 | 0.0 | 555 |
| Msa0753400 | MtrunA17_Chr8g0386401 | 80.392 | 204 | 39 | 1 | 65 | 267 | 1 | 204 | 3.20e-121 | 344 |
| Msa0753400 | MtrunA17_Chr8g0386391 | 57.576 | 66 | 15 | 1 | 1 | 53 | 1 | 66 | 1.54e-14 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753400 | AT4G20330.1 | 64.912 | 285 | 82 | 4 | 1 | 270 | 1 | 282 | 9.90e-122 | 349 |
| Msa0753400 | AT4G21010.1 | 55.036 | 278 | 110 | 6 | 1 | 266 | 1 | 275 | 1.26e-93 | 277 |
Find 91 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGCTGTTATTGACTTAA+AGG | 0.158931 | 5_2:-7054216 | Msa0753400:CDS |
| AAACAAGATTCTTAAGTAAA+AGG | 0.159439 | 5_2:-7052493 | Msa0753400:three_prime_UTR |
| TAGCTTACTGCCTCAGGTTT+TGG | 0.239321 | 5_2:-7052593 | Msa0753400:three_prime_UTR |
| CTTCTGGAAATTTGCGTATC+AGG | 0.239866 | 5_2:+7054240 | None:intergenic |
| TCTCCATCGTATCTTACTTT+TGG | 0.252078 | 5_2:+7054442 | None:intergenic |
| AACTGTAATGGAGGACTTAC+AGG | 0.272992 | 5_2:-7054183 | Msa0753400:intron |
| AGATGACACATTGCAAATTC+AGG | 0.283488 | 5_2:-7052533 | Msa0753400:three_prime_UTR |
| ATGGGCACTTTAGGATCATT+AGG | 0.284072 | 5_2:+7052986 | None:intergenic |
| AATTCTCGTAGTTTATTTAC+TGG | 0.285031 | 5_2:-7052683 | Msa0753400:three_prime_UTR |
| ATTCAGGACCATAAAATATA+TGG | 0.304595 | 5_2:+7052262 | None:intergenic |
| TCAATAACAGCAATGCCTTC+TGG | 0.315673 | 5_2:+7054224 | None:intergenic |
| AGGTCATCATCCACCTTAAT+GGG | 0.315953 | 5_2:+7052968 | None:intergenic |
| ATTACATCACTCTGAAATTC+AGG | 0.316206 | 5_2:+7052246 | None:intergenic |
| TCATTCTTAGGTCCTACTTC+TGG | 0.318907 | 5_2:-7052339 | Msa0753400:three_prime_UTR |
| ACATTGTCCCTCTCATTCTT+AGG | 0.322233 | 5_2:-7052351 | Msa0753400:three_prime_UTR |
| TGAAAGGTGGCAGGGAGATT+TGG | 0.323843 | 5_2:-7053048 | Msa0753400:CDS |
| AACCACCAGAAGAGGGGTTC+TGG | 0.326570 | 5_2:+7052460 | None:intergenic |
| TAGGTCATCATCCACCTTAA+TGG | 0.327997 | 5_2:+7052967 | None:intergenic |
| TCCACCTTAATGGGCACTTT+AGG | 0.329618 | 5_2:+7052977 | None:intergenic |
| AATGACTAAGTTGGCTATCT+TGG | 0.349953 | 5_2:+7052387 | None:intergenic |
| TTTAAATCAAGGGCAGAAAA+TGG | 0.358497 | 5_2:-7052414 | Msa0753400:three_prime_UTR |
| ATAATAAAGATATATCCTTC+TGG | 0.363335 | 5_2:+7052621 | None:intergenic |
| TGATCCTAAAGTGCCCATTA+AGG | 0.368344 | 5_2:-7052981 | Msa0753400:CDS |
| AAATTCAGGGTATTCCTTCC+AGG | 0.368853 | 5_2:-7052519 | Msa0753400:three_prime_UTR |
| TTGACCGGAGCAAGAGCATT+TGG | 0.376765 | 5_2:+7055888 | None:intergenic |
| CTCTTTGCAGTGTTAGTAGC+AGG | 0.378308 | 5_2:+7052866 | None:intergenic |
| AACAAGATTCTTAAGTAAAA+GGG | 0.380183 | 5_2:-7052492 | Msa0753400:three_prime_UTR |
| CGCTTCATTTGAGCTCCAAC+AGG | 0.397843 | 5_2:+7055813 | None:intergenic |
| GCTGACTAATGCCCATCTTC+CGG | 0.401133 | 5_2:-7052762 | Msa0753400:CDS |
| ATAGTCGAAACATGCTCTTC+GGG | 0.403328 | 5_2:-7054282 | Msa0753400:intron |
| GAGGAGGAGTGCAGCACAAA+TGG | 0.404625 | 5_2:-7052846 | Msa0753400:CDS |
| GACTCGGCAGGCTTTAACAT+TGG | 0.404721 | 5_2:-7054536 | Msa0753400:CDS |
| TTATATTGTTTGTTGCCTAT+TGG | 0.409041 | 5_2:-7052302 | Msa0753400:three_prime_UTR |
| ATTAGTCAGCTTGGTCCTCT+TGG | 0.410191 | 5_2:+7052775 | None:intergenic |
| TTGTATTAGCTTACTGCCTC+AGG | 0.411602 | 5_2:-7052599 | Msa0753400:three_prime_UTR |
| TTAAGAATCTTGTTTAATCC+TGG | 0.415946 | 5_2:+7052501 | None:intergenic |
| TATAGTCGAAACATGCTCTT+CGG | 0.434439 | 5_2:-7054283 | Msa0753400:intron |
| CACGCTGAGTTACTTAAATC+AGG | 0.434820 | 5_2:+7052715 | None:intergenic |
| TGGGCACTTTAGGATCATTA+GGG | 0.444208 | 5_2:+7052987 | None:intergenic |
| GATATATCCTTCTGGACAAT+GGG | 0.445314 | 5_2:+7052629 | None:intergenic |
| AGGTCGTATCATTTAAATCA+AGG | 0.462906 | 5_2:-7052425 | Msa0753400:three_prime_UTR |
| TAAGTAACTCAGCGTGTGTT+GGG | 0.463094 | 5_2:-7052708 | Msa0753400:three_prime_UTR |
| GTCTCTTTATTCTCACCAAT+AGG | 0.465310 | 5_2:+7052287 | None:intergenic |
| CATTATTCATTTCCAGAAGT+AGG | 0.468259 | 5_2:+7052327 | None:intergenic |
| TATAGGCTTTGAAAGGTGGC+AGG | 0.480454 | 5_2:-7053057 | Msa0753400:intron |
| GCTGTCCAACTTTGATTCAC+AGG | 0.485843 | 5_2:-7053023 | Msa0753400:CDS |
| GTCTTCCTGTGAATCAAAGT+TGG | 0.504653 | 5_2:+7053018 | None:intergenic |
| GAAATTCAGATGGCGTTACA+AGG | 0.505735 | 5_2:-7055999 | Msa0753400:intron |
| GGATTCATACCCAACTGTAA+TGG | 0.506042 | 5_2:-7054195 | Msa0753400:CDS |
| TTGCAATGTGTCATCTACTC+TGG | 0.506210 | 5_2:+7052540 | None:intergenic |
| GGCCAGAACCCCTCTTCTGG+TGG | 0.510290 | 5_2:-7052462 | Msa0753400:three_prime_UTR |
| TTCAGTTTATAGGCTTTGAA+AGG | 0.517712 | 5_2:-7053064 | Msa0753400:intron |
| GATGACACATTGCAAATTCA+GGG | 0.521727 | 5_2:-7052532 | Msa0753400:three_prime_UTR |
| AGATATATCCTTCTGGACAA+TGG | 0.524958 | 5_2:+7052628 | None:intergenic |
| TGTGCCAAATGCTCTTGCTC+CGG | 0.535916 | 5_2:-7055892 | Msa0753400:CDS |
| GAGATTTCCCATTGTCCAGA+AGG | 0.536634 | 5_2:-7052636 | Msa0753400:three_prime_UTR |
| GAATCTTGTTTAATCCTGGA+AGG | 0.542161 | 5_2:+7052505 | None:intergenic |
| TTAAGTAACTCAGCGTGTGT+TGG | 0.543699 | 5_2:-7052709 | Msa0753400:three_prime_UTR |
| TGTAAGTCCTCCATTACAGT+TGG | 0.544872 | 5_2:+7054185 | None:intergenic |
| GGTCGTATCATTTAAATCAA+GGG | 0.554513 | 5_2:-7052424 | Msa0753400:three_prime_UTR |
| ATGTTGAAGTCTCTCTGTAT+CGG | 0.571558 | 5_2:+7055857 | None:intergenic |
| ATCTGTGACGAACTCGATCA+CGG | 0.573010 | 5_2:-7056379 | Msa0753400:intron |
| ACTCTGCTAAATGACTAAGT+TGG | 0.574081 | 5_2:+7052378 | None:intergenic |
| GTGATATGATTGATATAGAG+AGG | 0.575017 | 5_2:-7052913 | Msa0753400:CDS |
| AGTATTCGTAAAGCTCCTGT+TGG | 0.575171 | 5_2:-7055828 | Msa0753400:CDS |
| AAGTAGGACCTAAGAATGAG+AGG | 0.577350 | 5_2:+7052343 | None:intergenic |
| AAGATGGGCATTAGTCAGCT+TGG | 0.579562 | 5_2:+7052766 | None:intergenic |
| CTTAAGTAAAAGGGCAAAGG+TGG | 0.580077 | 5_2:-7052483 | Msa0753400:three_prime_UTR |
| CTGATACGCAAATTTCCAGA+AGG | 0.581325 | 5_2:-7054239 | Msa0753400:CDS |
| ATCGAGCATAGCAGCAAACA+AGG | 0.582292 | 5_2:-7055928 | Msa0753400:CDS |
| AGTTTATAGGCTTTGAAAGG+TGG | 0.583829 | 5_2:-7053061 | Msa0753400:intron |
| ATTCTTAAGTAAAAGGGCAA+AGG | 0.590714 | 5_2:-7052486 | Msa0753400:three_prime_UTR |
| TCCTAAAGTGCCCATTAAGG+TGG | 0.592622 | 5_2:-7052978 | Msa0753400:CDS |
| TGGAGAAAGATTCTCTTACA+AGG | 0.595910 | 5_2:-7054425 | Msa0753400:intron |
| AGTAGGACCTAAGAATGAGA+GGG | 0.596404 | 5_2:+7052344 | None:intergenic |
| AATCCAAAAGTAAGATACGA+TGG | 0.596900 | 5_2:-7054445 | Msa0753400:CDS |
| TGTTAGCTTTCATGTCCACA+TGG | 0.600643 | 5_2:+7054494 | None:intergenic |
| GTAAGTCCTCCATTACAGTT+GGG | 0.602392 | 5_2:+7054186 | None:intergenic |
| AGGAGTGCAGCACAAATGGA+AGG | 0.606142 | 5_2:-7052842 | Msa0753400:CDS |
| GTATCGGTCGAAAATTTGAC+CGG | 0.607296 | 5_2:+7055873 | None:intergenic |
| CACTTTAGGATCATTAGGGT+AGG | 0.617730 | 5_2:+7052991 | None:intergenic |
| TTCATACCCAACTGTAATGG+AGG | 0.622275 | 5_2:-7054192 | Msa0753400:CDS |
| TGATATGATTGATATAGAGA+GGG | 0.634684 | 5_2:-7052912 | Msa0753400:CDS |
| ATAGGCTTTGAAAGGTGGCA+GGG | 0.637475 | 5_2:-7053056 | Msa0753400:intron |
| ACAAATTTGTCCAAAACCTG+AGG | 0.642175 | 5_2:+7052583 | None:intergenic |
| CTACTAACACTGCAAAGAGG+AGG | 0.649367 | 5_2:-7052862 | Msa0753400:CDS |
| AATAAATGAAACATGCCATG+TGG | 0.663478 | 5_2:-7054509 | Msa0753400:CDS |
| AAATCAAGGGCAGAAAATGG+CGG | 0.672302 | 5_2:-7052411 | Msa0753400:three_prime_UTR |
| AGAAGAATGAAATCACCAAG+AGG | 0.680362 | 5_2:-7052790 | Msa0753400:CDS |
| CTGCTACTAACACTGCAAAG+AGG | 0.683295 | 5_2:-7052865 | Msa0753400:CDS |
| TCTATATCAATCATATCACG+AGG | 0.737039 | 5_2:+7052917 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATATTATTAATTTATT+GGG | + | chr5_2:7053620-7053639 | None:intergenic | 0.0% |
| !! | ATTAAATATTATTAATTTAT+TGG | + | chr5_2:7053621-7053640 | None:intergenic | 0.0% |
| !! | ATAAATTAATAATATTTAAT+TGG | - | chr5_2:7053621-7053640 | Msa0753400:intron | 0.0% |
| !!! | TTAATACTTTTTATTATAAC+CGG | + | chr5_2:7053704-7053723 | None:intergenic | 10.0% |
| !!! | GTTATAATAAAAAGTATTAA+TGG | - | chr5_2:7053704-7053723 | Msa0753400:intron | 10.0% |
| !! | TTCTAATAATATTTATAAGA+TGG | + | chr5_2:7053768-7053787 | None:intergenic | 10.0% |
| !! | TAAAATATAATAGACAAATA+TGG | - | chr5_2:7054726-7054745 | Msa0753400:intron | 10.0% |
| !! | TTTATATTTGTTTAGTTATA+GGG | + | chr5_2:7055083-7055102 | None:intergenic | 10.0% |
| !! | ATTTATATTTGTTTAGTTAT+AGG | + | chr5_2:7055084-7055103 | None:intergenic | 10.0% |
| !!! | TGAAATTTTATTTTTGTGAT+CGG | + | chr5_2:7052413-7052432 | None:intergenic | 15.0% |
| !! | TAAAAATAATATCAACTTGT+GGG | + | chr5_2:7052882-7052901 | None:intergenic | 15.0% |
| !! | ATAAAAATAATATCAACTTG+TGG | + | chr5_2:7052883-7052902 | None:intergenic | 15.0% |
| !!! | TTTTATGATTATGAATACTT+TGG | - | chr5_2:7052897-7052916 | Msa0753400:CDS | 15.0% |
| !!! | TAATACTTTTTATTATAACC+GGG | + | chr5_2:7053703-7053722 | None:intergenic | 15.0% |
| !! | AACTTATATTTATATTGTTG+TGG | + | chr5_2:7054787-7054806 | None:intergenic | 15.0% |
| !!! | TTATTGGTTAATATTTATGT+TGG | + | chr5_2:7055297-7055316 | None:intergenic | 15.0% |
| !! | TCAAAATTTAGGTATATAAT+TGG | - | chr5_2:7055496-7055515 | Msa0753400:intron | 15.0% |
| !! | ATCGAGAAAGTAATAATAAT+CGG | + | chr5_2:7052328-7052347 | None:intergenic | 20.0% |
| !!! | TTTTATATGCAAAATCAATG+GGG | + | chr5_2:7052539-7052558 | None:intergenic | 20.0% |
| !!! | CTTTTATATGCAAAATCAAT+GGG | + | chr5_2:7052540-7052559 | None:intergenic | 20.0% |
| !!! | ACTTTTATATGCAAAATCAA+TGG | + | chr5_2:7052541-7052560 | None:intergenic | 20.0% |
| !!! | TCAAAATGATCAATTTTTCT+AGG | + | chr5_2:7052569-7052588 | None:intergenic | 20.0% |
| !! | TCAAATCAAATCAATTTCTA+GGG | + | chr5_2:7052596-7052615 | None:intergenic | 20.0% |
| !! | TTCAAATCAAATCAATTTCT+AGG | + | chr5_2:7052597-7052616 | None:intergenic | 20.0% |
| !! | TATCAAAAACCTAGATATTA+AGG | - | chr5_2:7053098-7053117 | Msa0753400:intron | 20.0% |
| !! | ATTTAATTGGACTAATTTGA+TGG | - | chr5_2:7053634-7053653 | Msa0753400:intron | 20.0% |
| !! | TAATATTTATAAGATGGCAT+GGG | + | chr5_2:7053762-7053781 | None:intergenic | 20.0% |
| !! | ATAATATTTATAAGATGGCA+TGG | + | chr5_2:7053763-7053782 | None:intergenic | 20.0% |
| !! | TTGTATGTGATGTATAAATA+TGG | - | chr5_2:7053889-7053908 | Msa0753400:intron | 20.0% |
| !!! | TTGTATTTTCTTAATAGACT+CGG | - | chr5_2:7054061-7054080 | Msa0753400:intron | 20.0% |
| !! | AAATAGTAGTATAAAAGAAG+AGG | + | chr5_2:7054279-7054298 | None:intergenic | 20.0% |
| !!! | CTTCTTTTATACTACTATTT+TGG | - | chr5_2:7054279-7054298 | Msa0753400:CDS | 20.0% |
| !! | AGTCTATACTTATATATTGA+TGG | - | chr5_2:7055021-7055040 | Msa0753400:intron | 20.0% |
| !!! | ATTTCATTCTTCTTTTTCTT+AGG | + | chr5_2:7055816-7055835 | None:intergenic | 20.0% |
| !! | ATAATAAAGATATATCCTTC+TGG | + | chr5_2:7055995-7056014 | None:intergenic | 20.0% |
| !! | AAACAAGATTCTTAAGTAAA+AGG | - | chr5_2:7056120-7056139 | Msa0753400:intron | 20.0% |
| !! | AACAAGATTCTTAAGTAAAA+GGG | - | chr5_2:7056121-7056140 | Msa0753400:intron | 20.0% |
| !!! | TTTATTTTTGTGATCGGAAA+GGG | + | chr5_2:7052407-7052426 | None:intergenic | 25.0% |
| !!! | TTTTATTTTTGTGATCGGAA+AGG | + | chr5_2:7052408-7052427 | None:intergenic | 25.0% |
| ! | CTAATGTATTGAAACTTTCT+TGG | + | chr5_2:7052498-7052517 | None:intergenic | 25.0% |
| !!! | GATTTGATTTGAAATTCAGA+TGG | - | chr5_2:7052604-7052623 | Msa0753400:three_prime_UTR | 25.0% |
| ! | AAAACAATCACAGTTAAAAG+TGG | - | chr5_2:7052973-7052992 | Msa0753400:CDS | 25.0% |
| ! | CTGAAATTGTAATTACGTTA+TGG | - | chr5_2:7053060-7053079 | Msa0753400:intron | 25.0% |
| !!! | ATACAACTTAGGCTTTTTTT+TGG | + | chr5_2:7053237-7053256 | None:intergenic | 25.0% |
| ! | AAAAAGCCTAAGTTGTATAT+AGG | - | chr5_2:7053239-7053258 | Msa0753400:intron | 25.0% |
| ! | ATGGATAAGCAACTTAATTA+TGG | - | chr5_2:7053268-7053287 | Msa0753400:intron | 25.0% |
| !!! | CTTATTTTCATAAACTCTTC+TGG | + | chr5_2:7053411-7053430 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCTATCTAAAG+AGG | - | chr5_2:7053516-7053535 | Msa0753400:intron | 25.0% |
| !! | TTTTATTATAACCGGGTTAA+TGG | + | chr5_2:7053696-7053715 | None:intergenic | 25.0% |
| ! | TTGTATAAAGTATAACCCAA+GGG | + | chr5_2:7053819-7053838 | None:intergenic | 25.0% |
| ! | ATTAGGAACAAAATAGCTTA+TGG | + | chr5_2:7053929-7053948 | None:intergenic | 25.0% |
| !!! | ATAAGCTATTTTGTTCCTAA+TGG | - | chr5_2:7053928-7053947 | Msa0753400:intron | 25.0% |
| ! | AAGCACTAAGTAAGTATATA+TGG | + | chr5_2:7054037-7054056 | None:intergenic | 25.0% |
| !!! | AAGATGTTTTTGACAATATG+AGG | - | chr5_2:7054142-7054161 | Msa0753400:intron | 25.0% |
| ! | GGTAAATTAGATTTAGTAGT+TGG | - | chr5_2:7054451-7054470 | Msa0753400:CDS | 25.0% |
| !!! | CATTCATTTTTCTGAAACAT+TGG | - | chr5_2:7054491-7054510 | Msa0753400:CDS | 25.0% |
| ! | ACTATTTAAGCTTCTTTCAT+AGG | + | chr5_2:7054665-7054684 | None:intergenic | 25.0% |
| ! | TAAATAGTCAACACAATTGA+TGG | - | chr5_2:7054677-7054696 | Msa0753400:intron | 25.0% |
| ! | GATACCATATTGAAGTTATA+GGG | + | chr5_2:7054857-7054876 | None:intergenic | 25.0% |
| ! | ATATTTGGGAATAATAAGCT+GGG | + | chr5_2:7054923-7054942 | None:intergenic | 25.0% |
| ! | TATATTTGGGAATAATAAGC+TGG | + | chr5_2:7054924-7054943 | None:intergenic | 25.0% |
| !! | GTAATTCTTTTATATGCATG+GGG | + | chr5_2:7055061-7055080 | None:intergenic | 25.0% |
| !! | GGTAATTCTTTTATATGCAT+GGG | + | chr5_2:7055062-7055081 | None:intergenic | 25.0% |
| !!! | CTGTTTTAGCATGTTTTTAT+TGG | - | chr5_2:7055388-7055407 | Msa0753400:intron | 25.0% |
| ! | TCATAAAGCTTTCAGTTTAT+AGG | - | chr5_2:7055539-7055558 | Msa0753400:intron | 25.0% |
| ! | TGATATGATTGATATAGAGA+GGG | - | chr5_2:7055701-7055720 | Msa0753400:intron | 25.0% |
| !! | TTCTTCTTTTTCTTAGGTTT+AGG | + | chr5_2:7055810-7055829 | None:intergenic | 25.0% |
| ! | AATTCTCGTAGTTTATTTAC+TGG | - | chr5_2:7055930-7055949 | Msa0753400:CDS | 25.0% |
| !! | TTAAGAATCTTGTTTAATCC+TGG | + | chr5_2:7056115-7056134 | None:intergenic | 25.0% |
| !! | TTATATTGTTTGTTGCCTAT+TGG | - | chr5_2:7056311-7056330 | Msa0753400:intron | 25.0% |
| !! | AGAGACTTCCATATATTTTA+TGG | - | chr5_2:7056343-7056362 | Msa0753400:intron | 25.0% |
| ! | ATTCAGGACCATAAAATATA+TGG | + | chr5_2:7056354-7056373 | None:intergenic | 25.0% |
| ATGCAGAAAAAGAAAGTCTT+TGG | + | chr5_2:7052194-7052213 | None:intergenic | 30.0% | |
| !! | AGATTTTTCGATATGGAAGA+AGG | + | chr5_2:7052218-7052237 | None:intergenic | 30.0% |
| GAACAATTCAATCAAAGAGA+GGG | + | chr5_2:7052440-7052459 | None:intergenic | 30.0% | |
| AGAACAATTCAATCAAAGAG+AGG | + | chr5_2:7052441-7052460 | None:intergenic | 30.0% | |
| ! | CGTTATTGATCTTCTTTTTG+AGG | - | chr5_2:7052823-7052842 | Msa0753400:CDS | 30.0% |
| TTGTAATTACGTTATGGTCA+TGG | - | chr5_2:7053066-7053085 | Msa0753400:intron | 30.0% | |
| GTATTCTGACCTTAATATCT+AGG | + | chr5_2:7053110-7053129 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+TGG | - | chr5_2:7053186-7053205 | Msa0753400:intron | 30.0% | |
| ! | TTAAGTTGCTTATCCATACA+GGG | + | chr5_2:7053265-7053284 | None:intergenic | 30.0% |
| ! | ATTAAGTTGCTTATCCATAC+AGG | + | chr5_2:7053266-7053285 | None:intergenic | 30.0% |
| AATAAGCTGAAAACACCTTA+TGG | - | chr5_2:7053425-7053444 | Msa0753400:intron | 30.0% | |
| AAGTACTAGTGAAACTGTTT+GGG | + | chr5_2:7053480-7053499 | None:intergenic | 30.0% | |
| TAAGTACTAGTGAAACTGTT+TGG | + | chr5_2:7053481-7053500 | None:intergenic | 30.0% | |
| AGAAGAAACAATCTCAGTAT+AGG | + | chr5_2:7053596-7053615 | None:intergenic | 30.0% | |
| GAAGAAACTACTTGTACTTT+AGG | - | chr5_2:7053785-7053804 | Msa0753400:intron | 30.0% | |
| CTTGTATAAAGTATAACCCA+AGG | + | chr5_2:7053820-7053839 | None:intergenic | 30.0% | |
| AATAAATGAAACATGCCATG+TGG | - | chr5_2:7054104-7054123 | Msa0753400:intron | 30.0% | |
| AATCCAAAAGTAAGATACGA+TGG | - | chr5_2:7054168-7054187 | Msa0753400:intron | 30.0% | |
| TGAACAAAATTGAAAGACGA+AGG | + | chr5_2:7054241-7054260 | None:intergenic | 30.0% | |
| !! | CATTGCTGTTATTGACTTAA+AGG | - | chr5_2:7054397-7054416 | Msa0753400:intron | 30.0% |
| ATAGTTGCTCAATAAGATCA+AGG | + | chr5_2:7054556-7054575 | None:intergenic | 30.0% | |
| AAATTCATCGTACACATGAA+AGG | + | chr5_2:7054600-7054619 | None:intergenic | 30.0% | |
| ! | TCATGTGTACGATGAATTTT+TGG | - | chr5_2:7054601-7054620 | Msa0753400:intron | 30.0% |
| ! | CATGTGTACGATGAATTTTT+GGG | - | chr5_2:7054602-7054621 | Msa0753400:intron | 30.0% |
| !! | TTAGTGACTGGTTAGTATTT+TGG | + | chr5_2:7054641-7054660 | None:intergenic | 30.0% |
| TATATGCATAAGATGTTGCA+AGG | - | chr5_2:7054701-7054720 | Msa0753400:intron | 30.0% | |
| ATATGCATAAGATGTTGCAA+GGG | - | chr5_2:7054702-7054721 | Msa0753400:intron | 30.0% | |
| ! | GTTAGTCTATCAGATACAAA+GGG | + | chr5_2:7054835-7054854 | None:intergenic | 30.0% |
| CTAACCCTATAACTTCAATA+TGG | - | chr5_2:7054850-7054869 | Msa0753400:intron | 30.0% | |
| CGATACCATATTGAAGTTAT+AGG | + | chr5_2:7054858-7054877 | None:intergenic | 30.0% | |
| TGTATATGGGATAATAACAC+TGG | + | chr5_2:7054893-7054912 | None:intergenic | 30.0% | |
| ATTGTCTATAGGATAAGTCA+GGG | + | chr5_2:7054953-7054972 | None:intergenic | 30.0% | |
| TTAGAGCTTAGATTGTCTAT+AGG | + | chr5_2:7054964-7054983 | None:intergenic | 30.0% | |
| ! | GACATTTCAATCATGTTTTG+TGG | - | chr5_2:7054998-7055017 | Msa0753400:intron | 30.0% |
| ! | GGGTAATTCTTTTATATGCA+TGG | + | chr5_2:7055063-7055082 | None:intergenic | 30.0% |
| !! | ACCAATAAAAGAGTGTGTTT+TGG | - | chr5_2:7055309-7055328 | Msa0753400:intron | 30.0% |
| ! | TCCAAAACACACTCTTTTAT+TGG | + | chr5_2:7055313-7055332 | None:intergenic | 30.0% |
| !!! | TGGTGAGTGATATTTTTTAG+AGG | - | chr5_2:7055463-7055482 | Msa0753400:intron | 30.0% |
| !!! | TGAGTGATATTTTTTAGAGG+TGG | - | chr5_2:7055466-7055485 | Msa0753400:intron | 30.0% |
| GTGGTCAATAGTCAAAATTT+AGG | - | chr5_2:7055485-7055504 | Msa0753400:intron | 30.0% | |
| !! | TTCAGTTTATAGGCTTTGAA+AGG | - | chr5_2:7055549-7055568 | Msa0753400:intron | 30.0% |
| TCTATATCAATCATATCACG+AGG | + | chr5_2:7055699-7055718 | None:intergenic | 30.0% | |
| GTGATATGATTGATATAGAG+AGG | - | chr5_2:7055700-7055719 | Msa0753400:intron | 30.0% | |
| ATTCTTAAGTAAAAGGGCAA+AGG | - | chr5_2:7056127-7056146 | Msa0753400:intron | 30.0% | |
| AGGTCGTATCATTTAAATCA+AGG | - | chr5_2:7056188-7056207 | Msa0753400:intron | 30.0% | |
| GGTCGTATCATTTAAATCAA+GGG | - | chr5_2:7056189-7056208 | Msa0753400:intron | 30.0% | |
| TTTAAATCAAGGGCAGAAAA+TGG | - | chr5_2:7056199-7056218 | Msa0753400:intron | 30.0% | |
| CATTATTCATTTCCAGAAGT+AGG | + | chr5_2:7056289-7056308 | None:intergenic | 30.0% | |
| !! | ATTACATCACTCTGAAATTC+AGG | + | chr5_2:7056370-7056389 | None:intergenic | 30.0% |
| !! | TCGTCACAGATTTTTCGATA+TGG | + | chr5_2:7052225-7052244 | None:intergenic | 35.0% |
| ATGTTGAAGTCTCTCTGTAT+CGG | + | chr5_2:7052759-7052778 | None:intergenic | 35.0% | |
| ! | CTTAGTGTTGCTGAAAATTG+TGG | - | chr5_2:7053016-7053035 | Msa0753400:CDS | 35.0% |
| TGCATAAAATATGCATGGTC+CGG | - | chr5_2:7053191-7053210 | Msa0753400:intron | 35.0% | |
| !!! | CTTAGGCTTTTTTTTGGTAG+TGG | + | chr5_2:7053231-7053250 | None:intergenic | 35.0% |
| ACACCTTATGGACATATCAT+TGG | - | chr5_2:7053437-7053456 | Msa0753400:intron | 35.0% | |
| ! | ACTAATTTGATGGACGACTT+TGG | - | chr5_2:7053644-7053663 | Msa0753400:intron | 35.0% |
| TGGTCATATTATTTCCTCAC+AGG | - | chr5_2:7053664-7053683 | Msa0753400:intron | 35.0% | |
| GGTCATATTATTTCCTCACA+GGG | - | chr5_2:7053665-7053684 | Msa0753400:intron | 35.0% | |
| TATTATAACCGGGTTAATGG+TGG | + | chr5_2:7053693-7053712 | None:intergenic | 35.0% | |
| CATGGGACTATAAATTTGCA+CGG | + | chr5_2:7053745-7053764 | None:intergenic | 35.0% | |
| !! | TCAAAATCACGTTGCTGTTT+AGG | - | chr5_2:7053847-7053866 | Msa0753400:intron | 35.0% |
| TTCCTAATGGTTATTCTGAG+TGG | - | chr5_2:7053941-7053960 | Msa0753400:intron | 35.0% | |
| ! | ATTTTCTTAATAGACTCGGC+AGG | - | chr5_2:7054065-7054084 | Msa0753400:intron | 35.0% |
| ! | TCTCCATCGTATCTTACTTT+TGG | + | chr5_2:7054174-7054193 | None:intergenic | 35.0% |
| TGGAGAAAGATTCTCTTACA+AGG | - | chr5_2:7054188-7054207 | Msa0753400:CDS | 35.0% | |
| TATAGTCGAAACATGCTCTT+CGG | - | chr5_2:7054330-7054349 | Msa0753400:intron | 35.0% | |
| CAATAAGATCAAGGTGGTAT+GGG | + | chr5_2:7054547-7054566 | None:intergenic | 35.0% | |
| TCAATAAGATCAAGGTGGTA+TGG | + | chr5_2:7054548-7054567 | None:intergenic | 35.0% | |
| ACACATGAAAGGAATCAAGT+TGG | + | chr5_2:7054589-7054608 | None:intergenic | 35.0% | |
| TATTGTTGTGGATGATGAGT+TGG | + | chr5_2:7054775-7054794 | None:intergenic | 35.0% | |
| !! | GGTTAGTCTATCAGATACAA+AGG | + | chr5_2:7054836-7054855 | None:intergenic | 35.0% |
| ! | ACTTCAATATGGTATCGAAG+TGG | - | chr5_2:7054861-7054880 | Msa0753400:intron | 35.0% |
| GATTGTCTATAGGATAAGTC+AGG | + | chr5_2:7054954-7054973 | None:intergenic | 35.0% | |
| ! | ATTCTTTTATATGCATGGGG+AGG | + | chr5_2:7055058-7055077 | None:intergenic | 35.0% |
| ATTATTCCTACCCAAAGTCT+CGG | - | chr5_2:7055124-7055143 | Msa0753400:intron | 35.0% | |
| AGAGTGTAACTACAAAGAGA+GGG | + | chr5_2:7055188-7055207 | None:intergenic | 35.0% | |
| TGGTCCCACTAAATTCATAT+GGG | + | chr5_2:7055277-7055296 | None:intergenic | 35.0% | |
| TTGGTCCCACTAAATTCATA+TGG | + | chr5_2:7055278-7055297 | None:intergenic | 35.0% | |
| !! | AGTTTATAGGCTTTGAAAGG+TGG | - | chr5_2:7055552-7055571 | Msa0753400:intron | 35.0% |
| !!! | ACCTAAAACAGCTTTTTCGT+GGG | - | chr5_2:7055664-7055683 | Msa0753400:intron | 35.0% |
| !!! | CAGGCTTCATTCCATTTTTT+TGG | + | chr5_2:7055731-7055750 | None:intergenic | 35.0% |
| ! | CTTTTTCTTAGGTTTAGGCT+TGG | + | chr5_2:7055805-7055824 | None:intergenic | 35.0% |
| AGAAGAATGAAATCACCAAG+AGG | - | chr5_2:7055823-7055842 | Msa0753400:CDS | 35.0% | |
| !! | TTCAAGTTCTGAAAAAGCTC+CGG | + | chr5_2:7055873-7055892 | None:intergenic | 35.0% |
| GATATATCCTTCTGGACAAT+GGG | + | chr5_2:7055987-7056006 | None:intergenic | 35.0% | |
| AGATATATCCTTCTGGACAA+TGG | + | chr5_2:7055988-7056007 | None:intergenic | 35.0% | |
| ACAAATTTGTCCAAAACCTG+AGG | + | chr5_2:7056033-7056052 | None:intergenic | 35.0% | |
| AGATGACACATTGCAAATTC+AGG | - | chr5_2:7056080-7056099 | Msa0753400:intron | 35.0% | |
| GATGACACATTGCAAATTCA+GGG | - | chr5_2:7056081-7056100 | Msa0753400:intron | 35.0% | |
| ! | GAATCTTGTTTAATCCTGGA+AGG | + | chr5_2:7056111-7056130 | None:intergenic | 35.0% |
| TTAGAAAAACCACCAGAAGA+GGG | + | chr5_2:7056163-7056182 | None:intergenic | 35.0% | |
| TTTAGAAAAACCACCAGAAG+AGG | + | chr5_2:7056164-7056183 | None:intergenic | 35.0% | |
| ! | TGGTGGTTTTTCTAAACTCA+AGG | - | chr5_2:7056168-7056187 | Msa0753400:intron | 35.0% |
| ! | AATGACTAAGTTGGCTATCT+TGG | + | chr5_2:7056229-7056248 | None:intergenic | 35.0% |
| ACTCTGCTAAATGACTAAGT+TGG | + | chr5_2:7056238-7056257 | None:intergenic | 35.0% | |
| GTCTCTTTATTCTCACCAAT+AGG | + | chr5_2:7056329-7056348 | None:intergenic | 35.0% | |
| GAAATTCAGATGGCGTTACA+AGG | - | chr5_2:7052614-7052633 | Msa0753400:three_prime_UTR | 40.0% | |
| ! | GTATCGGTCGAAAATTTGAC+CGG | + | chr5_2:7052743-7052762 | None:intergenic | 40.0% |
| AGTATTCGTAAAGCTCCTGT+TGG | - | chr5_2:7052785-7052804 | Msa0753400:CDS | 40.0% | |
| GCATAAAATATGCATGGTCC+GGG | - | chr5_2:7053192-7053211 | Msa0753400:intron | 40.0% | |
| CATAAAATATGCATGGTCCG+GGG | - | chr5_2:7053193-7053212 | Msa0753400:intron | 40.0% | |
| ACAGGGCCTATATACAACTT+AGG | + | chr5_2:7053248-7053267 | None:intergenic | 40.0% | |
| AGTTGTATATAGGCCCTGTA+TGG | - | chr5_2:7053249-7053268 | Msa0753400:intron | 40.0% | |
| CAGCCAATGATATGTCCATA+AGG | + | chr5_2:7053443-7053462 | None:intergenic | 40.0% | |
| GTATAGGTACCTCTTGTCAT+AGG | + | chr5_2:7053580-7053599 | None:intergenic | 40.0% | |
| GGACTATAAATTTGCACGGA+AGG | + | chr5_2:7053741-7053760 | None:intergenic | 40.0% | |
| !! | ACTTTAGGTTCTAAAGCCCT+TGG | - | chr5_2:7053800-7053819 | Msa0753400:intron | 40.0% |
| !! | CTTTAGGTTCTAAAGCCCTT+GGG | - | chr5_2:7053801-7053820 | Msa0753400:intron | 40.0% |
| CACCACTCAGAATAACCATT+AGG | + | chr5_2:7053946-7053965 | None:intergenic | 40.0% | |
| ! | ATAAAGCTTTTCAGCCAACC+CGG | - | chr5_2:7053977-7053996 | Msa0753400:intron | 40.0% |
| !! | TGTTAGCTTTCATGTCCACA+TGG | + | chr5_2:7054122-7054141 | None:intergenic | 40.0% |
| ATAGTCGAAACATGCTCTTC+GGG | - | chr5_2:7054331-7054350 | Msa0753400:intron | 40.0% | |
| ! | CTTCTGGAAATTTGCGTATC+AGG | + | chr5_2:7054376-7054395 | None:intergenic | 40.0% |
| CTGATACGCAAATTTCCAGA+AGG | - | chr5_2:7054374-7054393 | Msa0753400:intron | 40.0% | |
| TCAATAACAGCAATGCCTTC+TGG | + | chr5_2:7054392-7054411 | None:intergenic | 40.0% | |
| GGATTCATACCCAACTGTAA+TGG | - | chr5_2:7054418-7054437 | Msa0753400:intron | 40.0% | |
| TTCATACCCAACTGTAATGG+AGG | - | chr5_2:7054421-7054440 | Msa0753400:intron | 40.0% | |
| GTAAGTCCTCCATTACAGTT+GGG | + | chr5_2:7054430-7054449 | None:intergenic | 40.0% | |
| TGTAAGTCCTCCATTACAGT+TGG | + | chr5_2:7054431-7054450 | None:intergenic | 40.0% | |
| ! | AACTGTAATGGAGGACTTAC+AGG | - | chr5_2:7054430-7054449 | Msa0753400:CDS | 40.0% |
| GTTGCTCAATAAGATCAAGG+TGG | + | chr5_2:7054553-7054572 | None:intergenic | 40.0% | |
| TCTTTCATAGGCTTAGTGAC+TGG | + | chr5_2:7054653-7054672 | None:intergenic | 40.0% | |
| AGTCTATCAGATACAAAGGG+AGG | + | chr5_2:7054832-7054851 | None:intergenic | 40.0% | |
| GCTGGGACAAGATTGTATAT+GGG | + | chr5_2:7054906-7054925 | None:intergenic | 40.0% | |
| AGCTGGGACAAGATTGTATA+TGG | + | chr5_2:7054907-7054926 | None:intergenic | 40.0% | |
| GTCAGGGACAGACTATATTT+GGG | + | chr5_2:7054937-7054956 | None:intergenic | 40.0% | |
| AGTCAGGGACAGACTATATT+TGG | + | chr5_2:7054938-7054957 | None:intergenic | 40.0% | |
| ! | GAGAGTGTAACTACAAAGAG+AGG | + | chr5_2:7055189-7055208 | None:intergenic | 40.0% |
| TGGGTCCCATATGAATTTAG+TGG | - | chr5_2:7055269-7055288 | Msa0753400:intron | 40.0% | |
| GGGTCCCATATGAATTTAGT+GGG | - | chr5_2:7055270-7055289 | Msa0753400:intron | 40.0% | |
| GTCTTCCTGTGAATCAAAGT+TGG | + | chr5_2:7055598-7055617 | None:intergenic | 40.0% | |
| !! | CACTTTAGGATCATTAGGGT+AGG | + | chr5_2:7055625-7055644 | None:intergenic | 40.0% |
| !! | TGGGCACTTTAGGATCATTA+GGG | + | chr5_2:7055629-7055648 | None:intergenic | 40.0% |
| !! | ATGGGCACTTTAGGATCATT+AGG | + | chr5_2:7055630-7055649 | None:intergenic | 40.0% |
| ! | TGATCCTAAAGTGCCCATTA+AGG | - | chr5_2:7055632-7055651 | Msa0753400:intron | 40.0% |
| AGGTCATCATCCACCTTAAT+GGG | + | chr5_2:7055648-7055667 | None:intergenic | 40.0% | |
| TAGGTCATCATCCACCTTAA+TGG | + | chr5_2:7055649-7055668 | None:intergenic | 40.0% | |
| !!! | GACCTAAAACAGCTTTTTCG+TGG | - | chr5_2:7055663-7055682 | Msa0753400:intron | 40.0% |
| !! | TCCCACGAAAAAGCTGTTTT+AGG | + | chr5_2:7055668-7055687 | None:intergenic | 40.0% |
| GAGAGGGATCTCCAAAAAAA+TGG | - | chr5_2:7055717-7055736 | Msa0753400:intron | 40.0% | |
| CACGCTGAGTTACTTAAATC+AGG | + | chr5_2:7055901-7055920 | None:intergenic | 40.0% | |
| TTAAGTAACTCAGCGTGTGT+TGG | - | chr5_2:7055904-7055923 | Msa0753400:CDS | 40.0% | |
| TAAGTAACTCAGCGTGTGTT+GGG | - | chr5_2:7055905-7055924 | Msa0753400:CDS | 40.0% | |
| ! | TTGTATTAGCTTACTGCCTC+AGG | - | chr5_2:7056014-7056033 | Msa0753400:intron | 40.0% |
| TTGCAATGTGTCATCTACTC+TGG | + | chr5_2:7056076-7056095 | None:intergenic | 40.0% | |
| ! | AAATTCAGGGTATTCCTTCC+AGG | - | chr5_2:7056094-7056113 | Msa0753400:intron | 40.0% |
| CTTAAGTAAAAGGGCAAAGG+TGG | - | chr5_2:7056130-7056149 | Msa0753400:intron | 40.0% | |
| TAGAAAAACCACCAGAAGAG+GGG | + | chr5_2:7056162-7056181 | None:intergenic | 40.0% | |
| AAATCAAGGGCAGAAAATGG+CGG | - | chr5_2:7056202-7056221 | Msa0753400:intron | 40.0% | |
| ACATTGTCCCTCTCATTCTT+AGG | - | chr5_2:7056262-7056281 | Msa0753400:intron | 40.0% | |
| AGTAGGACCTAAGAATGAGA+GGG | + | chr5_2:7056272-7056291 | None:intergenic | 40.0% | |
| AAGTAGGACCTAAGAATGAG+AGG | + | chr5_2:7056273-7056292 | None:intergenic | 40.0% | |
| TCATTCTTAGGTCCTACTTC+TGG | - | chr5_2:7056274-7056293 | Msa0753400:intron | 40.0% | |
| ATCTGTGACGAACTCGATCA+CGG | - | chr5_2:7052234-7052253 | Msa0753400:three_prime_UTR | 45.0% | |
| TGATCGGAAAGGGTGAAAAG+GGG | + | chr5_2:7052397-7052416 | None:intergenic | 45.0% | |
| GTGATCGGAAAGGGTGAAAA+GGG | + | chr5_2:7052398-7052417 | None:intergenic | 45.0% | |
| TGTGATCGGAAAGGGTGAAA+AGG | + | chr5_2:7052399-7052418 | None:intergenic | 45.0% | |
| ATCGAGCATAGCAGCAAACA+AGG | - | chr5_2:7052685-7052704 | Msa0753400:three_prime_UTR | 45.0% | |
| ACGACGAGGACATACAACTT+AGG | + | chr5_2:7053145-7053164 | None:intergenic | 45.0% | |
| TCAGCTTGACTCAGTTGGTT+GGG | - | chr5_2:7053164-7053183 | Msa0753400:intron | 45.0% | |
| !!! | CTTTTTTTTGGTAGTGGCCG+GGG | + | chr5_2:7053225-7053244 | None:intergenic | 45.0% |
| !!! | GCTTTTTTTTGGTAGTGGCC+GGG | + | chr5_2:7053226-7053245 | None:intergenic | 45.0% |
| !!! | GGCTTTTTTTTGGTAGTGGC+CGG | + | chr5_2:7053227-7053246 | None:intergenic | 45.0% |
| GCAATTCCTCCTATGACAAG+AGG | - | chr5_2:7053568-7053587 | Msa0753400:intron | 45.0% | |
| TAGGTACCTCTTGTCATAGG+AGG | + | chr5_2:7053577-7053596 | None:intergenic | 45.0% | |
| ATACCCATCAACCACAAGAG+AGG | + | chr5_2:7054004-7054023 | None:intergenic | 45.0% | |
| ! | AGAGAGGGTGCATATACACT+TGG | + | chr5_2:7055173-7055192 | None:intergenic | 45.0% |
| ACGAGTCCTACCAATTCTTG+TGG | - | chr5_2:7055249-7055268 | Msa0753400:intron | 45.0% | |
| CGAGTCCTACCAATTCTTGT+GGG | - | chr5_2:7055250-7055269 | Msa0753400:intron | 45.0% | |
| CATATGGGACCCACAAGAAT+TGG | + | chr5_2:7055262-7055281 | None:intergenic | 45.0% | |
| TATACTCAGATGACTCGCTG+TGG | - | chr5_2:7055443-7055462 | Msa0753400:intron | 45.0% | |
| !! | TATAGGCTTTGAAAGGTGGC+AGG | - | chr5_2:7055556-7055575 | Msa0753400:intron | 45.0% |
| !! | ATAGGCTTTGAAAGGTGGCA+GGG | - | chr5_2:7055557-7055576 | Msa0753400:intron | 45.0% |
| GCTGTCCAACTTTGATTCAC+AGG | - | chr5_2:7055590-7055609 | Msa0753400:intron | 45.0% | |
| ! | TCCTAAAGTGCCCATTAAGG+TGG | - | chr5_2:7055635-7055654 | Msa0753400:intron | 45.0% |
| ! | TCCACCTTAATGGGCACTTT+AGG | + | chr5_2:7055639-7055658 | None:intergenic | 45.0% |
| CTCTTTGCAGTGTTAGTAGC+AGG | + | chr5_2:7055750-7055769 | None:intergenic | 45.0% | |
| CTGCTACTAACACTGCAAAG+AGG | - | chr5_2:7055748-7055767 | Msa0753400:intron | 45.0% | |
| CTACTAACACTGCAAAGAGG+AGG | - | chr5_2:7055751-7055770 | Msa0753400:intron | 45.0% | |
| ATTAGTCAGCTTGGTCCTCT+TGG | + | chr5_2:7055841-7055860 | None:intergenic | 45.0% | |
| AAGATGGGCATTAGTCAGCT+TGG | + | chr5_2:7055850-7055869 | None:intergenic | 45.0% | |
| CTGAAAAAGCTCCGGAAGAT+GGG | + | chr5_2:7055865-7055884 | None:intergenic | 45.0% | |
| TCTGAAAAAGCTCCGGAAGA+TGG | + | chr5_2:7055866-7055885 | None:intergenic | 45.0% | |
| GAGATTTCCCATTGTCCAGA+AGG | - | chr5_2:7055977-7055996 | Msa0753400:CDS | 45.0% | |
| ! | TAGCTTACTGCCTCAGGTTT+TGG | - | chr5_2:7056020-7056039 | Msa0753400:intron | 45.0% |
| TGTGCCAAATGCTCTTGCTC+CGG | - | chr5_2:7052721-7052740 | Msa0753400:exon | 50.0% | |
| !! | TTGACCGGAGCAAGAGCATT+TGG | + | chr5_2:7052728-7052747 | None:intergenic | 50.0% |
| CGCTTCATTTGAGCTCCAAC+AGG | + | chr5_2:7052803-7052822 | None:intergenic | 50.0% | |
| GTCAGCTTGACTCAGTTGGT+TGG | - | chr5_2:7053163-7053182 | Msa0753400:intron | 50.0% | |
| !! | GTTAATGGTGGATCCCTGTG+AGG | + | chr5_2:7053681-7053700 | None:intergenic | 50.0% |
| ACAGGGATCCACCATTAACC+CGG | - | chr5_2:7053682-7053701 | Msa0753400:intron | 50.0% | |
| ATCAACCACAAGAGAGGTCC+GGG | + | chr5_2:7053998-7054017 | None:intergenic | 50.0% | |
| CATCAACCACAAGAGAGGTC+CGG | + | chr5_2:7053999-7054018 | None:intergenic | 50.0% | |
| GGACCTCTCTTGTGGTTGAT+GGG | - | chr5_2:7053998-7054017 | Msa0753400:intron | 50.0% | |
| ! | GACTCGGCAGGCTTTAACAT+TGG | - | chr5_2:7054077-7054096 | Msa0753400:intron | 50.0% |
| AGGGAGGAACGTGAATACTC+AGG | + | chr5_2:7054816-7054835 | None:intergenic | 50.0% | |
| CTCAGAGAAGCCGAGACTTT+GGG | + | chr5_2:7055137-7055156 | None:intergenic | 50.0% | |
| TCTCAGAGAAGCCGAGACTT+TGG | + | chr5_2:7055138-7055157 | None:intergenic | 50.0% | |
| !! | CTTCTCTGAGACAAGGCACA+AGG | - | chr5_2:7055147-7055166 | Msa0753400:intron | 50.0% |
| TGGGACCCACAAGAATTGGT+AGG | + | chr5_2:7055258-7055277 | None:intergenic | 50.0% | |
| TGAAAGGTGGCAGGGAGATT+TGG | - | chr5_2:7055565-7055584 | Msa0753400:intron | 50.0% | |
| ! | AGGAGTGCAGCACAAATGGA+AGG | - | chr5_2:7055771-7055790 | Msa0753400:intron | 50.0% |
| GCTGACTAATGCCCATCTTC+CGG | - | chr5_2:7055851-7055870 | Msa0753400:CDS | 50.0% | |
| ACTGAGTCAAGCTGACGACG+AGG | + | chr5_2:7053159-7053178 | None:intergenic | 55.0% | |
| CGTCGTCAGCTTGACTCAGT+TGG | - | chr5_2:7053159-7053178 | Msa0753400:intron | 55.0% | |
| CGGACCTCTCTTGTGGTTGA+TGG | - | chr5_2:7053997-7054016 | Msa0753400:intron | 55.0% | |
| GAGAAGCCGAGACTTTGGGT+AGG | + | chr5_2:7055133-7055152 | None:intergenic | 55.0% | |
| !! | GTCTCGGCTTCTCTGAGACA+AGG | - | chr5_2:7055140-7055159 | Msa0753400:intron | 55.0% |
| ! | GAGGAGGAGTGCAGCACAAA+TGG | - | chr5_2:7055767-7055786 | Msa0753400:intron | 55.0% |
| AACCACCAGAAGAGGGGTTC+TGG | + | chr5_2:7056156-7056175 | None:intergenic | 55.0% | |
| ATGGTCCGGGGTTCAAACCC+CGG | - | chr5_2:7053205-7053224 | Msa0753400:intron | 60.0% | |
| ACCACAAGAGAGGTCCGGGT+TGG | + | chr5_2:7053994-7054013 | None:intergenic | 60.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | + | chr5_2:7053213-7053232 | None:intergenic | 65.0% | |
| GCCAACCCGGACCTCTCTTG+TGG | - | chr5_2:7053990-7054009 | Msa0753400:intron | 65.0% | |
| GGTGGCCAGAACCCCTCTTC+TGG | - | chr5_2:7056148-7056167 | Msa0753400:intron | 65.0% | |
| GGCCAGAACCCCTCTTCTGG+TGG | - | chr5_2:7056151-7056170 | Msa0753400:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 7052181 | 7056454 | 7052181 | ID=Msa0753400;Name=Msa0753400 |
| chr5_2 | mRNA | 7052181 | 7056454 | 7052181 | ID=Msa0753400-mRNA-1;Parent=Msa0753400;Name=Msa0753400-mRNA-1;_AED=0.26;_eAED=0.26;_QI=75|1|1|1|0.75|0.8|5|552|270 |
| chr5_2 | exon | 7052181 | 7053074 | 7052181 | ID=Msa0753400-mRNA-1:exon:3128;Parent=Msa0753400-mRNA-1 |
| chr5_2 | exon | 7054184 | 7054300 | 7054184 | ID=Msa0753400-mRNA-1:exon:3127;Parent=Msa0753400-mRNA-1 |
| chr5_2 | exon | 7054426 | 7054557 | 7054426 | ID=Msa0753400-mRNA-1:exon:3126;Parent=Msa0753400-mRNA-1 |
| chr5_2 | exon | 7055791 | 7056012 | 7055791 | ID=Msa0753400-mRNA-1:exon:3125;Parent=Msa0753400-mRNA-1 |
| chr5_2 | exon | 7056380 | 7056454 | 7056380 | ID=Msa0753400-mRNA-1:exon:3124;Parent=Msa0753400-mRNA-1 |
| chr5_2 | five_prime_UTR | 7056380 | 7056454 | 7056380 | ID=Msa0753400-mRNA-1:five_prime_utr;Parent=Msa0753400-mRNA-1 |
| chr5_2 | CDS | 7055791 | 7056012 | 7055791 | ID=Msa0753400-mRNA-1:cds;Parent=Msa0753400-mRNA-1 |
| chr5_2 | CDS | 7054426 | 7054557 | 7054426 | ID=Msa0753400-mRNA-1:cds;Parent=Msa0753400-mRNA-1 |
| chr5_2 | CDS | 7054184 | 7054300 | 7054184 | ID=Msa0753400-mRNA-1:cds;Parent=Msa0753400-mRNA-1 |
| chr5_2 | CDS | 7052733 | 7053074 | 7052733 | ID=Msa0753400-mRNA-1:cds;Parent=Msa0753400-mRNA-1 |
| chr5_2 | three_prime_UTR | 7052181 | 7052732 | 7052181 | ID=Msa0753400-mRNA-1:three_prime_utr;Parent=Msa0753400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
