Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338270 | MCI24052.1 | 90.141 | 71 | 7 | 0 | 50 | 120 | 8 | 78 | 1.78e-37 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338270 | sp|P47192|VA722_ARATH | 57.843 | 102 | 40 | 2 | 44 | 144 | 58 | 157 | 9.93e-29 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0338270 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0338270 | Msa0653210 | 0.802946 | 4.405986e-49 | -8.615850e-47 |
| Msa0338270 | Msa0931700 | 0.827088 | 1.897944e-54 | -8.615850e-47 |
| Msa0338270 | Msa1377680 | 0.822257 | 2.609631e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338270 | MtrunA17_Chr2g0291651 | 90.141 | 71 | 7 | 0 | 50 | 120 | 68 | 138 | 5.04e-41 | 139 |
| Msa0338270 | MtrunA17_Chr5g0396491 | 89.855 | 69 | 7 | 0 | 148 | 216 | 413 | 481 | 1.40e-40 | 144 |
| Msa0338270 | MtrunA17_Chr4g0043521 | 76.623 | 77 | 18 | 0 | 44 | 120 | 60 | 136 | 1.26e-35 | 125 |
| Msa0338270 | MtrunA17_Chr4g0038851 | 71.014 | 69 | 20 | 0 | 148 | 216 | 404 | 472 | 6.17e-31 | 118 |
| Msa0338270 | MtrunA17_Chr4g0010211 | 55.208 | 96 | 40 | 2 | 48 | 142 | 1 | 94 | 1.32e-29 | 106 |
| Msa0338270 | MtrunA17_Chr4g0010271 | 55.208 | 96 | 40 | 2 | 50 | 144 | 64 | 157 | 7.07e-28 | 105 |
| Msa0338270 | MtrunA17_Chr1g0169851 | 66.197 | 71 | 24 | 0 | 50 | 120 | 15 | 85 | 9.69e-28 | 102 |
| Msa0338270 | MtrunA17_Chr1g0169861 | 55.556 | 99 | 38 | 3 | 50 | 144 | 114 | 210 | 2.00e-26 | 102 |
| Msa0338270 | MtrunA17_Chr7g0237521 | 63.380 | 71 | 26 | 0 | 50 | 120 | 64 | 134 | 2.61e-26 | 100 |
| Msa0338270 | MtrunA17_Chr7g0237561 | 53.684 | 95 | 41 | 2 | 51 | 144 | 65 | 157 | 7.17e-25 | 97.4 |
| Msa0338270 | MtrunA17_Chr2g0296021 | 60.563 | 71 | 28 | 0 | 50 | 120 | 64 | 134 | 1.29e-23 | 94.0 |
| Msa0338270 | MtrunA17_Chr1g0210521 | 38.938 | 113 | 47 | 4 | 50 | 142 | 64 | 174 | 1.23e-16 | 75.9 |
| Msa0338270 | MtrunA17_Chr7g0224271 | 41.096 | 73 | 41 | 1 | 141 | 213 | 603 | 673 | 1.99e-13 | 68.6 |
| Msa0338270 | MtrunA17_Chr3g0085681 | 45.588 | 68 | 36 | 1 | 148 | 215 | 372 | 438 | 2.61e-13 | 68.2 |
| Msa0338270 | MtrunA17_Chr3g0085361 | 44.118 | 68 | 36 | 2 | 148 | 215 | 287 | 352 | 3.84e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338270 | AT2G33110.2 | 67.105 | 76 | 25 | 0 | 44 | 119 | 58 | 133 | 7.28e-30 | 109 |
| Msa0338270 | AT2G33120.1 | 57.843 | 102 | 40 | 2 | 44 | 144 | 58 | 157 | 1.01e-29 | 110 |
| Msa0338270 | AT2G33120.2 | 59.375 | 96 | 36 | 2 | 50 | 144 | 72 | 165 | 1.03e-29 | 110 |
| Msa0338270 | AT2G32670.1 | 70.130 | 77 | 23 | 0 | 44 | 120 | 123 | 199 | 1.85e-29 | 111 |
| Msa0338270 | AT2G33110.1 | 67.105 | 76 | 25 | 0 | 44 | 119 | 58 | 133 | 2.29e-29 | 109 |
| Msa0338270 | AT1G04750.1 | 58.333 | 96 | 37 | 2 | 50 | 144 | 64 | 157 | 5.76e-29 | 108 |
| Msa0338270 | AT1G04760.2 | 67.532 | 77 | 25 | 0 | 44 | 120 | 58 | 134 | 1.26e-28 | 107 |
| Msa0338270 | AT1G04760.1 | 67.532 | 77 | 25 | 0 | 44 | 120 | 58 | 134 | 1.26e-28 | 107 |
| Msa0338270 | AT1G50420.1 | 66.667 | 69 | 23 | 0 | 148 | 216 | 414 | 482 | 4.43e-27 | 107 |
| Msa0338270 | AT4G15780.1 | 61.972 | 71 | 27 | 0 | 50 | 120 | 65 | 135 | 6.29e-24 | 94.4 |
| Msa0338270 | AT1G04750.2 | 58.025 | 81 | 31 | 2 | 65 | 144 | 1 | 79 | 2.11e-22 | 89.0 |
| Msa0338270 | AT1G04750.4 | 58.025 | 81 | 31 | 2 | 65 | 144 | 1 | 79 | 2.11e-22 | 89.0 |
| Msa0338270 | AT1G04750.3 | 58.025 | 81 | 31 | 2 | 65 | 144 | 1 | 79 | 2.11e-22 | 89.0 |
| Msa0338270 | AT3G54300.3 | 37.391 | 115 | 46 | 4 | 50 | 142 | 64 | 174 | 3.36e-14 | 69.7 |
| Msa0338270 | AT3G54300.2 | 37.391 | 115 | 46 | 4 | 50 | 142 | 64 | 174 | 3.36e-14 | 69.7 |
| Msa0338270 | AT3G54300.1 | 37.391 | 115 | 46 | 4 | 50 | 142 | 64 | 174 | 3.36e-14 | 69.7 |
Find 60 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCCTTGTTAAGGCTAT+TGG | 0.247487 | 2_4:-58506965 | None:intergenic |
| AATAGCCTTAACAAGGAGTT+TGG | 0.289067 | 2_4:+58506967 | Msa0338270:CDS |
| CCAAGAGGAAGAAGGGAAAT+TGG | 0.317265 | 2_4:+58505804 | Msa0338270:CDS |
| TGCATATGTTCCTTCAACTT+TGG | 0.333932 | 2_4:-58507075 | None:intergenic |
| CCAATTTCCCTTCTTCCTCT+TGG | 0.334831 | 2_4:-58505804 | None:intergenic |
| AACTCCTTGTTAAGGCTATT+GGG | 0.344900 | 2_4:-58506964 | None:intergenic |
| AGACTTGATTCCTGTGGATT+TGG | 0.369989 | 2_4:+58509962 | Msa0338270:CDS |
| AGAAGGTTTCTACAGGGTTA+TGG | 0.375050 | 2_4:+58510022 | Msa0338270:CDS |
| AAGGGAGGGAGAGGAGAAGA+AGG | 0.375659 | 2_4:+58505736 | Msa0338270:CDS |
| CCTTGAGGCTATTCCATTTG+TGG | 0.382802 | 2_4:-58508641 | None:intergenic |
| TATAGAATGAGAGAAGAAAA+TGG | 0.386659 | 2_4:+58510055 | Msa0338270:CDS |
| TTAATGCAGGTTACCACAAA+TGG | 0.394064 | 2_4:+58508628 | Msa0338270:intron |
| GCCTCAAGGGTTGATGGATA+TGG | 0.399274 | 2_4:+58508655 | Msa0338270:CDS |
| AAGAAAAGAAGAGGAAACAG+TGG | 0.433575 | 2_4:+58505777 | Msa0338270:CDS |
| CAGTATACGATAATAGCTTA+AGG | 0.434273 | 2_4:-58509993 | None:intergenic |
| TAGTAACCTGCTGGCAGGAC+AGG | 0.439719 | 2_4:+58510083 | Msa0338270:CDS |
| GAACGAGAGAAGGGAGGGAG+AGG | 0.446128 | 2_4:+58505727 | Msa0338270:CDS |
| GGAATAGCCTCAAGGGTTGA+TGG | 0.463256 | 2_4:+58508649 | Msa0338270:CDS |
| AACTAGAAGACAGGTTCCTA+TGG | 0.467041 | 2_4:+58506873 | Msa0338270:CDS |
| GCAGGCAAGAAGGTTTCTAC+AGG | 0.468697 | 2_4:+58510015 | Msa0338270:CDS |
| GGGAGAAACAGAACGAGAGA+AGG | 0.471024 | 2_4:+58505717 | Msa0338270:CDS |
| CAACAACAGTGTGGAGAGCT+AGG | 0.475812 | 2_4:+58510116 | Msa0338270:CDS |
| TCTGCACAGGCCAAAGTTGA+AGG | 0.478923 | 2_4:+58507065 | Msa0338270:intron |
| AGTACCCAAACTCCTTGTTA+AGG | 0.484076 | 2_4:-58506972 | None:intergenic |
| GGAGAAACAGAACGAGAGAA+GGG | 0.497591 | 2_4:+58505718 | Msa0338270:CDS |
| ATAGCCTTAACAAGGAGTTT+GGG | 0.499292 | 2_4:+58506968 | Msa0338270:CDS |
| AGTATACGATAATAGCTTAA+GGG | 0.507427 | 2_4:-58509992 | None:intergenic |
| CAAAGACCTGTCCTGCCAGC+AGG | 0.516037 | 2_4:-58510089 | None:intergenic |
| AAACAGAACGAGAGAAGGGA+GGG | 0.518245 | 2_4:+58505722 | Msa0338270:CDS |
| GTCAAAATATGGTGGTGAAA+AGG | 0.526879 | 2_4:+58506927 | Msa0338270:CDS |
| ACAGAAATAGGGAAAGTGAC+GGG | 0.527890 | 2_4:+58505695 | Msa0338270:intron |
| ATCCTTGACACGCTCTCGAA+AGG | 0.532121 | 2_4:-58506896 | None:intergenic |
| ATCGTATACTGCAGGCAAGA+AGG | 0.553817 | 2_4:+58510005 | Msa0338270:CDS |
| GTGGGTAACCAAGAGGAAGA+AGG | 0.555031 | 2_4:+58505796 | Msa0338270:CDS |
| CTACAGGGTTATGGTTGTGA+CGG | 0.558409 | 2_4:+58510031 | Msa0338270:CDS |
| GAAACAGAACGAGAGAAGGG+AGG | 0.558418 | 2_4:+58505721 | Msa0338270:CDS |
| GAAGAAGGAAAAGAAGCCGA+TGG | 0.563967 | 2_4:+58505751 | Msa0338270:CDS |
| AAGCTATTATCGTATACTGC+AGG | 0.573353 | 2_4:+58509997 | Msa0338270:CDS |
| AGAAAAGAAGAGGAAACAGT+GGG | 0.574477 | 2_4:+58505778 | Msa0338270:CDS |
| CACAAATGGAATAGCCTCAA+GGG | 0.574895 | 2_4:+58508642 | Msa0338270:CDS |
| CGATGGAGAAAGAAAAGAAG+AGG | 0.576550 | 2_4:+58505768 | Msa0338270:CDS |
| AAATTGGAGAAGAATATTCA+AGG | 0.576564 | 2_4:+58505820 | Msa0338270:CDS |
| ACACGCTCTCGAAAGGCCAT+AGG | 0.585706 | 2_4:-58506889 | None:intergenic |
| TGGTGTTGATCTCAAGAAAG+TGG | 0.588028 | 2_4:+58508675 | Msa0338270:CDS |
| AGATGAATCAACTAGAAGAC+AGG | 0.588785 | 2_4:+58506864 | Msa0338270:CDS |
| CCACAAATGGAATAGCCTCA+AGG | 0.595503 | 2_4:+58508641 | Msa0338270:CDS |
| CAGAAATAGGGAAAGTGACG+GGG | 0.596326 | 2_4:+58505696 | Msa0338270:intron |
| TGGGTAACCAAGAGGAAGAA+GGG | 0.601125 | 2_4:+58505797 | Msa0338270:CDS |
| GGGGACATTACCAAATCCAC+AGG | 0.602260 | 2_4:-58509972 | None:intergenic |
| GTATACGATAATAGCTTAAG+GGG | 0.604591 | 2_4:-58509991 | None:intergenic |
| TACAGAAATAGGGAAAGTGA+CGG | 0.610620 | 2_4:+58505694 | Msa0338270:intron |
| CAAGATAAGCAAGCTTGCAA+AGG | 0.611690 | 2_4:+58507119 | Msa0338270:CDS |
| GGCCTTTCGAGAGCGTGTCA+AGG | 0.624404 | 2_4:+58506894 | Msa0338270:CDS |
| TCCTCCCAATAGCCTTAACA+AGG | 0.645443 | 2_4:+58506960 | Msa0338270:CDS |
| CAGGCAAGAAGGTTTCTACA+GGG | 0.650713 | 2_4:+58510016 | Msa0338270:CDS |
| TTTATGAGACTTGATTCCTG+TGG | 0.650871 | 2_4:+58509956 | Msa0338270:CDS |
| TCCTTGTTAAGGCTATTGGG+AGG | 0.672970 | 2_4:-58506961 | None:intergenic |
| GGAAACAGTGGGTAACCAAG+AGG | 0.685707 | 2_4:+58505789 | Msa0338270:CDS |
| ACCATATCCATCAACCCTTG+AGG | 0.687454 | 2_4:-58508656 | None:intergenic |
| AGAAATAGGGAAAGTGACGG+GGG | 0.709509 | 2_4:+58505697 | Msa0338270:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTCTATAAATATTTC+TGG | + | chr2_4:58508484-58508503 | Msa0338270:intron | 10.0% |
| !!! | TATAAAATTGATTACCTTTT+TGG | + | chr2_4:58507331-58507350 | Msa0338270:intron | 15.0% |
| !!! | TAATTTTGACCAAAATAATT+TGG | + | chr2_4:58507891-58507910 | Msa0338270:intron | 15.0% |
| !! | AGATAAAATTCAAATGAAAT+GGG | - | chr2_4:58508386-58508405 | None:intergenic | 15.0% |
| !! | TAGATAAAATTCAAATGAAA+TGG | - | chr2_4:58508387-58508406 | None:intergenic | 15.0% |
| !! | ATTTGAATTGATATATAGTA+GGG | - | chr2_4:58508448-58508467 | None:intergenic | 15.0% |
| !! | TATTTGAATTGATATATAGT+AGG | - | chr2_4:58508449-58508468 | None:intergenic | 15.0% |
| !!! | ACTCTATTTATTTTAAGTAT+AGG | - | chr2_4:58508602-58508621 | None:intergenic | 15.0% |
| !! | CTATAAAACAAATCAAAAAA+GGG | - | chr2_4:58508865-58508884 | None:intergenic | 15.0% |
| !!! | CTTTTTTGATTTGTTTTATA+GGG | + | chr2_4:58508864-58508883 | Msa0338270:intron | 15.0% |
| !! | AAATCAAAAACTAAAATTTG+GGG | - | chr2_4:58508915-58508934 | None:intergenic | 15.0% |
| !! | CAAATCAAAAACTAAAATTT+GGG | - | chr2_4:58508916-58508935 | None:intergenic | 15.0% |
| !! | ACAAATCAAAAACTAAAATT+TGG | - | chr2_4:58508917-58508936 | None:intergenic | 15.0% |
| !!! | AGTTTTTGATTTGTTTTATT+CGG | + | chr2_4:58508923-58508942 | Msa0338270:intron | 15.0% |
| !!! | AGTTTGATTTTAAAATTAGA+AGG | - | chr2_4:58509133-58509152 | None:intergenic | 15.0% |
| !!! | GATTTTGATACATTTTTTTA+TGG | + | chr2_4:58509796-58509815 | Msa0338270:intron | 15.0% |
| !! | AATTGATTGATGAATAATAT+CGG | - | chr2_4:58509903-58509922 | None:intergenic | 15.0% |
| !!! | TTGTGATTTTATACAGAAAT+AGG | + | chr2_4:58505683-58505702 | Msa0338270:intron | 20.0% |
| !!! | TGTGATTTTATACAGAAATA+GGG | + | chr2_4:58505684-58505703 | Msa0338270:intron | 20.0% |
| !!! | TATTTTTGTTTTTGCTTTTG+TGG | + | chr2_4:58505972-58505991 | Msa0338270:intron | 20.0% |
| !! | TTTGTGAAATTGACTAAAAT+TGG | + | chr2_4:58506141-58506160 | Msa0338270:intron | 20.0% |
| !! | GTAAAAATAGAATTTCATAC+TGG | - | chr2_4:58506262-58506281 | None:intergenic | 20.0% |
| !! | AATGTTCCTTTAATAATATG+TGG | + | chr2_4:58506547-58506566 | Msa0338270:intron | 20.0% |
| !! | CAATTACCACATATTATTAA+AGG | - | chr2_4:58506556-58506575 | None:intergenic | 20.0% |
| !! | TACCAAATAAACTTGTAAAA+GGG | - | chr2_4:58506583-58506602 | None:intergenic | 20.0% |
| !! | TAAGATGATAATTTCCTTTA+TGG | - | chr2_4:58506689-58506708 | None:intergenic | 20.0% |
| !! | TTTGATGGGATAAAAAATTA+TGG | + | chr2_4:58507393-58507412 | Msa0338270:intron | 20.0% |
| !! | TTGATGGGATAAAAAATTAT+GGG | + | chr2_4:58507394-58507413 | Msa0338270:intron | 20.0% |
| !! | GAAAATAAAAAAGAATGAAG+GGG | - | chr2_4:58507703-58507722 | None:intergenic | 20.0% |
| !! | GGAAAATAAAAAAGAATGAA+GGG | - | chr2_4:58507704-58507723 | None:intergenic | 20.0% |
| !! | AGGAAAATAAAAAAGAATGA+AGG | - | chr2_4:58507705-58507724 | None:intergenic | 20.0% |
| !! | AATATATAAATTAGGCTCAA+AGG | - | chr2_4:58507725-58507744 | None:intergenic | 20.0% |
| !! | ATATACATTCATTTAACCAT+TGG | + | chr2_4:58507750-58507769 | Msa0338270:intron | 20.0% |
| !! | AAAATTACTATCTACGATTT+AGG | - | chr2_4:58507878-58507897 | None:intergenic | 20.0% |
| !! | ATAAGACAGTAAACAATTAT+TGG | + | chr2_4:58508118-58508137 | Msa0338270:intron | 20.0% |
| !!! | TATTGATTCTTAGTTAATTG+AGG | + | chr2_4:58508142-58508161 | Msa0338270:intron | 20.0% |
| !!! | ATTATTTGAATCATTTGCTA+TGG | + | chr2_4:58508166-58508185 | Msa0338270:intron | 20.0% |
| !!! | TTTTATCTTTGTTGTTAGTT+TGG | + | chr2_4:58508289-58508308 | Msa0338270:intron | 20.0% |
| !! | CCTATAAAACAAATCAAAAA+AGG | - | chr2_4:58508866-58508885 | None:intergenic | 20.0% |
| !!! | CCTTTTTTGATTTGTTTTAT+AGG | + | chr2_4:58508863-58508882 | Msa0338270:intron | 20.0% |
| !!! | TTATTTTCTTACAATTTTGC+AGG | + | chr2_4:58509247-58509266 | Msa0338270:intron | 20.0% |
| !! | GCAATAGTAAATGTATAATA+AGG | + | chr2_4:58509731-58509750 | Msa0338270:intron | 20.0% |
| !!! | TTGATACATTTTTTTATGGT+TGG | + | chr2_4:58509800-58509819 | Msa0338270:intron | 20.0% |
| !!! | AGTTTTTCATGTCTTTATTA+GGG | - | chr2_4:58509926-58509945 | None:intergenic | 20.0% |
| !!! | AAGTTTTTCATGTCTTTATT+AGG | - | chr2_4:58509927-58509946 | None:intergenic | 20.0% |
| ! | AAATTGGAGAAGAATATTCA+AGG | + | chr2_4:58505820-58505839 | Msa0338270:CDS | 25.0% |
| !!! | TTTGTTGTTGATTCTGTTTT+TGG | + | chr2_4:58506016-58506035 | Msa0338270:intron | 25.0% |
| !! | CTTGATGACTTAAAAATTGA+TGG | + | chr2_4:58506182-58506201 | Msa0338270:intron | 25.0% |
| !!! | TGAAATTCTATTTTTACTGC+AGG | + | chr2_4:58506265-58506284 | Msa0338270:intron | 25.0% |
| ! | TCGTTCATATAATATCCTAA+AGG | - | chr2_4:58506291-58506310 | None:intergenic | 25.0% |
| !!! | TACTGGTTCATATTTTGTAA+TGG | - | chr2_4:58506336-58506355 | None:intergenic | 25.0% |
| ! | TTACAAAATATGAACCAGTA+AGG | + | chr2_4:58506336-58506355 | Msa0338270:intron | 25.0% |
| !!! | TTTTTTCCTAATCATTCTGA+TGG | + | chr2_4:58506458-58506477 | Msa0338270:intron | 25.0% |
| !!! | TGATGGAGAATTGTTTTTAA+AGG | + | chr2_4:58506475-58506494 | Msa0338270:intron | 25.0% |
| ! | AATCTTAATATCAAGCTCTT+GGG | - | chr2_4:58506514-58506533 | None:intergenic | 25.0% |
| ! | AAATCTTAATATCAAGCTCT+TGG | - | chr2_4:58506515-58506534 | None:intergenic | 25.0% |
| !! | TTCCCTTTTACAAGTTTATT+TGG | + | chr2_4:58506578-58506597 | Msa0338270:intron | 25.0% |
| ! | GTACCAAATAAACTTGTAAA+AGG | - | chr2_4:58506584-58506603 | None:intergenic | 25.0% |
| ! | TAATAGGAGATTATCATCTT+AGG | + | chr2_4:58506660-58506679 | Msa0338270:intron | 25.0% |
| !! | AGAAGAAATGTCTAACTTTT+TGG | + | chr2_4:58506817-58506836 | Msa0338270:intron | 25.0% |
| !! | GAAGAAATGTCTAACTTTTT+GGG | + | chr2_4:58506818-58506837 | Msa0338270:intron | 25.0% |
| !! | GATGATTTTGTGTCAAAATA+TGG | + | chr2_4:58506916-58506935 | Msa0338270:CDS | 25.0% |
| !!! | TAAACTTTTGGAGTTTAATC+TGG | + | chr2_4:58507007-58507026 | Msa0338270:intron | 25.0% |
| !! | CTGGTAGACTATTTATATTT+TGG | + | chr2_4:58507026-58507045 | Msa0338270:intron | 25.0% |
| !!! | TACCTTTTTGGTTATATCAT+TGG | + | chr2_4:58507343-58507362 | Msa0338270:intron | 25.0% |
| ! | TGCTTGAATTGTTTATTTGA+TGG | + | chr2_4:58507378-58507397 | Msa0338270:intron | 25.0% |
| ! | GCTTGAATTGTTTATTTGAT+GGG | + | chr2_4:58507379-58507398 | Msa0338270:intron | 25.0% |
| ! | TTGAAAGCTAGTTAGAAAAA+AGG | - | chr2_4:58507992-58508011 | None:intergenic | 25.0% |
| !! | CTTATCCTTTTTGATACATT+TGG | + | chr2_4:58508350-58508369 | Msa0338270:intron | 25.0% |
| ! | AACAACCAAATGTATCAAAA+AGG | - | chr2_4:58508358-58508377 | None:intergenic | 25.0% |
| !! | TATTATGACATTTTTGCAAG+AGG | - | chr2_4:58508784-58508803 | None:intergenic | 25.0% |
| !! | ACAATTTTGCAGGTTTTTTA+TGG | + | chr2_4:58509257-58509276 | Msa0338270:intron | 25.0% |
| !! | TTTTATGGAGAAATTCAGAT+TGG | + | chr2_4:58509272-58509291 | Msa0338270:intron | 25.0% |
| ! | AATAGCAACTTACAAATATG+AGG | - | chr2_4:58509534-58509553 | None:intergenic | 25.0% |
| ! | TATCCTTTCATTCAATCATA+TGG | + | chr2_4:58509656-58509675 | Msa0338270:intron | 25.0% |
| ! | GTGTACAAACTTGATAAAAA+AGG | + | chr2_4:58509875-58509894 | Msa0338270:intron | 25.0% |
| ! | GACATGAAAAACTTCATAAA+TGG | + | chr2_4:58509933-58509952 | Msa0338270:intron | 25.0% |
| ! | AGTATACGATAATAGCTTAA+GGG | - | chr2_4:58509995-58510014 | None:intergenic | 25.0% |
| ! | TATAGAATGAGAGAAGAAAA+TGG | + | chr2_4:58510055-58510074 | Msa0338270:CDS | 25.0% |
| ! | GTGATTTCTTGCTATATTGT+GGG | + | chr2_4:58505842-58505861 | Msa0338270:intron | 30.0% |
| ATATTGTGGGAATGCATAAT+TGG | + | chr2_4:58505855-58505874 | Msa0338270:intron | 30.0% | |
| TGGCTTATGATGAATATTCA+AGG | + | chr2_4:58505875-58505894 | Msa0338270:intron | 30.0% | |
| !!! | TTGTTTTTGCTTTTGTGGTT+TGG | + | chr2_4:58505977-58505996 | Msa0338270:intron | 30.0% |
| !!! | TTTTGAGATGAAATCACACT+TGG | + | chr2_4:58506098-58506117 | Msa0338270:intron | 30.0% |
| CTTGGTATAAATTGCACATA+AGG | + | chr2_4:58506116-58506135 | Msa0338270:intron | 30.0% | |
| CAGTGATATATGAATCTGTT+CGG | + | chr2_4:58506219-58506238 | Msa0338270:intron | 30.0% | |
| AGGATATTATATGAACGAGT+TGG | + | chr2_4:58506293-58506312 | Msa0338270:intron | 30.0% | |
| CTATTCCATCTTTCTAAGTA+TGG | - | chr2_4:58506369-58506388 | None:intergenic | 30.0% | |
| AATTCTCCATCAGAATGATT+AGG | - | chr2_4:58506467-58506486 | None:intergenic | 30.0% | |
| ATAATCTCCTATTAGTACTC+TGG | - | chr2_4:58506654-58506673 | None:intergenic | 30.0% | |
| ATCATCTTAGGTAACCATAA+AGG | + | chr2_4:58506672-58506691 | Msa0338270:intron | 30.0% | |
| ! | GATTTTGTGTCAAAATATGG+TGG | + | chr2_4:58506919-58506938 | Msa0338270:CDS | 30.0% |
| TAAACTCCAAAAGTTTAGAG+CGG | - | chr2_4:58507004-58507023 | None:intergenic | 30.0% | |
| ! | CATGATGGAGAATATTGAAA+AGG | + | chr2_4:58507174-58507193 | Msa0338270:intron | 30.0% |
| TCAAGTCAATGTTATCATAG+AGG | + | chr2_4:58507218-58507237 | Msa0338270:intron | 30.0% | |
| TCATTGATGAGAATTGATAG+AGG | + | chr2_4:58507244-58507263 | Msa0338270:intron | 30.0% | |
| CACCAATGATATAACCAAAA+AGG | - | chr2_4:58507348-58507367 | None:intergenic | 30.0% | |
| AGAGAAAATGTAGAGAAAGA+AGG | - | chr2_4:58507500-58507519 | None:intergenic | 30.0% | |
| TTCGAACATTACGAAAAGAA+GGG | - | chr2_4:58507672-58507691 | None:intergenic | 30.0% | |
| ATTCGAACATTACGAAAAGA+AGG | - | chr2_4:58507673-58507692 | None:intergenic | 30.0% | |
| CCAAAATTCAGAAATTCCAA+TGG | - | chr2_4:58507769-58507788 | None:intergenic | 30.0% | |
| ! | CCATTGGAATTTCTGAATTT+TGG | + | chr2_4:58507766-58507785 | Msa0338270:intron | 30.0% |
| ! | TCAGGCAAACCAAATTATTT+TGG | - | chr2_4:58507903-58507922 | None:intergenic | 30.0% |
| TTCTATTAATTGCCTCACTA+TGG | + | chr2_4:58507966-58507985 | Msa0338270:intron | 30.0% | |
| TTAACTACAGTAGAGATTCT+TGG | + | chr2_4:58508027-58508046 | Msa0338270:intron | 30.0% | |
| AAATCATTAGAGAAATGCCA+AGG | - | chr2_4:58508195-58508214 | None:intergenic | 30.0% | |
| !! | CTTTGTTGTTAGTTTGGATT+TGG | + | chr2_4:58508295-58508314 | Msa0338270:intron | 30.0% |
| ! | ATAGAGTTTTTCCTTAATGC+AGG | + | chr2_4:58508615-58508634 | Msa0338270:intron | 30.0% |
| !! | TGAATGAGACTGATTTTCTT+AGG | + | chr2_4:58508818-58508837 | Msa0338270:intron | 30.0% |
| !! | GAATGAGACTGATTTTCTTA+GGG | + | chr2_4:58508819-58508838 | Msa0338270:intron | 30.0% |
| GTTAGCATTGTTATCACAAT+TGG | - | chr2_4:58509041-58509060 | None:intergenic | 30.0% | |
| ! | ATGCTAACATCATTTTCCAT+TGG | + | chr2_4:58509053-58509072 | Msa0338270:intron | 30.0% |
| TAGTAAAATGTCCTCTTTCT+AGG | + | chr2_4:58509076-58509095 | Msa0338270:intron | 30.0% | |
| AATTCAGATTGGTACTCATT+TGG | + | chr2_4:58509283-58509302 | Msa0338270:intron | 30.0% | |
| ATTCAGATTGGTACTCATTT+GGG | + | chr2_4:58509284-58509303 | Msa0338270:intron | 30.0% | |
| ACATTCAACACATACAAATC+AGG | - | chr2_4:58509392-58509411 | None:intergenic | 30.0% | |
| ! | GTATGTGTTGAATGTTGTTT+AGG | + | chr2_4:58509397-58509416 | Msa0338270:intron | 30.0% |
| ACACCATATGATTGAATGAA+AGG | - | chr2_4:58509662-58509681 | None:intergenic | 30.0% | |
| TTGCAATTAAATTGCTGCAT+GGG | + | chr2_4:58509754-58509773 | Msa0338270:intron | 30.0% | |
| GTATACGATAATAGCTTAAG+GGG | - | chr2_4:58509994-58510013 | None:intergenic | 30.0% | |
| CAGTATACGATAATAGCTTA+AGG | - | chr2_4:58509996-58510015 | None:intergenic | 30.0% | |
| TACAGAAATAGGGAAAGTGA+CGG | + | chr2_4:58505694-58505713 | Msa0338270:intron | 35.0% | |
| ! | CTCTTCTTTTCTTTCTCCAT+CGG | - | chr2_4:58505770-58505789 | None:intergenic | 35.0% |
| AAGAAAAGAAGAGGAAACAG+TGG | + | chr2_4:58505777-58505796 | Msa0338270:CDS | 35.0% | |
| AGAAAAGAAGAGGAAACAGT+GGG | + | chr2_4:58505778-58505797 | Msa0338270:CDS | 35.0% | |
| ! | GGTGATTTCTTGCTATATTG+TGG | + | chr2_4:58505841-58505860 | Msa0338270:intron | 35.0% |
| TGATATATGAATCTGTTCGG+TGG | + | chr2_4:58506222-58506241 | Msa0338270:intron | 35.0% | |
| !! | TATTTTTACTGCAGGCCTTT+AGG | + | chr2_4:58506273-58506292 | Msa0338270:intron | 35.0% |
| !! | TTATATGAACGAGTTGGTCT+TGG | + | chr2_4:58506299-58506318 | Msa0338270:intron | 35.0% |
| TCCTACCATACTTAGAAAGA+TGG | + | chr2_4:58506361-58506380 | Msa0338270:intron | 35.0% | |
| TCCATCTTTCTAAGTATGGT+AGG | - | chr2_4:58506365-58506384 | None:intergenic | 35.0% | |
| ! | TCCAGCATTTATGTTTTCAG+AGG | + | chr2_4:58506717-58506736 | Msa0338270:intron | 35.0% |
| ! | ACCTCTGAAAACATAAATGC+TGG | - | chr2_4:58506721-58506740 | None:intergenic | 35.0% |
| AGATGAATCAACTAGAAGAC+AGG | + | chr2_4:58506864-58506883 | Msa0338270:CDS | 35.0% | |
| ! | GTCAAAATATGGTGGTGAAA+AGG | + | chr2_4:58506927-58506946 | Msa0338270:CDS | 35.0% |
| AACTCCTTGTTAAGGCTATT+GGG | - | chr2_4:58506967-58506986 | None:intergenic | 35.0% | |
| AAACTCCTTGTTAAGGCTAT+TGG | - | chr2_4:58506968-58506987 | None:intergenic | 35.0% | |
| ! | AATAGCCTTAACAAGGAGTT+TGG | + | chr2_4:58506967-58506986 | Msa0338270:CDS | 35.0% |
| ! | ATAGCCTTAACAAGGAGTTT+GGG | + | chr2_4:58506968-58506987 | Msa0338270:CDS | 35.0% |
| !! | AACTTTCCGCTCTAAACTTT+TGG | + | chr2_4:58506995-58507014 | Msa0338270:intron | 35.0% |
| TGCATATGTTCCTTCAACTT+TGG | - | chr2_4:58507078-58507097 | None:intergenic | 35.0% | |
| !! | TGAAGTTAAAGGTGTCATGA+TGG | + | chr2_4:58507159-58507178 | Msa0338270:intron | 35.0% |
| TGCTAATTCTCTAACACAGA+TGG | + | chr2_4:58507286-58507305 | Msa0338270:intron | 35.0% | |
| !!! | CTCTAACACAGATGGTTTTT+TGG | + | chr2_4:58507294-58507313 | Msa0338270:intron | 35.0% |
| ATGTAGAGAAAGAAGGAAGA+GGG | - | chr2_4:58507493-58507512 | None:intergenic | 35.0% | |
| AATGTAGAGAAAGAAGGAAG+AGG | - | chr2_4:58507494-58507513 | None:intergenic | 35.0% | |
| TCGAACATTACGAAAAGAAG+GGG | - | chr2_4:58507671-58507690 | None:intergenic | 35.0% | |
| !! | TTCTGAATTTTGGCCTGATA+CGG | + | chr2_4:58507776-58507795 | Msa0338270:intron | 35.0% |
| ! | CACAGTCAAGATAACTTTTC+AGG | - | chr2_4:58507921-58507940 | None:intergenic | 35.0% |
| TTAGAAAAAAGGCCATAGTG+AGG | - | chr2_4:58507981-58508000 | None:intergenic | 35.0% | |
| !! | ATCATTTGCTATGGTTTCCT+TGG | + | chr2_4:58508175-58508194 | Msa0338270:intron | 35.0% |
| TTTGGATTTGGCCATAGATT+CGG | + | chr2_4:58508307-58508326 | Msa0338270:intron | 35.0% | |
| ATTAAACTCCTCCGAATCTA+TGG | - | chr2_4:58508321-58508340 | None:intergenic | 35.0% | |
| ATTTGTGGTAACCTGCATTA+AGG | - | chr2_4:58508629-58508648 | None:intergenic | 35.0% | |
| TTAATGCAGGTTACCACAAA+TGG | + | chr2_4:58508628-58508647 | Msa0338270:intron | 35.0% | |
| GTGGTAGAAAAAGTAGAACA+TGG | + | chr2_4:58508694-58508713 | Msa0338270:CDS | 35.0% | |
| ! | AGTAGAACATGGTTTGTAAC+TGG | + | chr2_4:58508705-58508724 | Msa0338270:intron | 35.0% |
| ACAAATACTCAAGAAGCCAT+TGG | - | chr2_4:58508759-58508778 | None:intergenic | 35.0% | |
| ! | ACTAAAATTTGGGGTTCAAC+TGG | - | chr2_4:58508906-58508925 | None:intergenic | 35.0% |
| ! | AGAGGACATTTTACTACCAA+TGG | - | chr2_4:58509072-58509091 | None:intergenic | 35.0% |
| TAACAAACTCTCCTAGAAAG+AGG | - | chr2_4:58509090-58509109 | None:intergenic | 35.0% | |
| ACAGACTTATCACAATTGAG+AGG | - | chr2_4:58509184-58509203 | None:intergenic | 35.0% | |
| !!! | ATTTGGGAAGTTGTTTTTGC+AGG | + | chr2_4:58509300-58509319 | Msa0338270:intron | 35.0% |
| CATACAAATCAGGACATATG+AGG | - | chr2_4:58509382-58509401 | None:intergenic | 35.0% | |
| ! | TGTTGAATGTTGTTTAGGAG+AGG | + | chr2_4:58509402-58509421 | Msa0338270:intron | 35.0% |
| TGCTTCCAATTCACATGAAT+AGG | + | chr2_4:58509431-58509450 | Msa0338270:intron | 35.0% | |
| GCTTCCAATTCACATGAATA+GGG | + | chr2_4:58509432-58509451 | Msa0338270:intron | 35.0% | |
| CTTCCAATTCACATGAATAG+GGG | + | chr2_4:58509433-58509452 | Msa0338270:intron | 35.0% | |
| TAGTTACATGCCTCTGAATT+TGG | + | chr2_4:58509580-58509599 | Msa0338270:intron | 35.0% | |
| GTTGCAATTAAATTGCTGCA+TGG | + | chr2_4:58509753-58509772 | Msa0338270:intron | 35.0% | |
| TTTATGAGACTTGATTCCTG+TGG | + | chr2_4:58509956-58509975 | Msa0338270:CDS | 35.0% | |
| AAGCTATTATCGTATACTGC+AGG | + | chr2_4:58509997-58510016 | Msa0338270:CDS | 35.0% | |
| !!! | CTTTGTTTTCAACAACAGTG+TGG | + | chr2_4:58510107-58510126 | Msa0338270:CDS | 35.0% |
| ACAGAAATAGGGAAAGTGAC+GGG | + | chr2_4:58505695-58505714 | Msa0338270:intron | 40.0% | |
| CGATGGAGAAAGAAAAGAAG+AGG | + | chr2_4:58505768-58505787 | Msa0338270:CDS | 40.0% | |
| !!! | CTTTTGTGGTTTGGTGATTC+TGG | + | chr2_4:58505986-58506005 | Msa0338270:intron | 40.0% |
| AACTAGAAGACAGGTTCCTA+TGG | + | chr2_4:58506873-58506892 | Msa0338270:CDS | 40.0% | |
| AGTACCCAAACTCCTTGTTA+AGG | - | chr2_4:58506975-58506994 | None:intergenic | 40.0% | |
| CAAGATAAGCAAGCTTGCAA+AGG | + | chr2_4:58507119-58507138 | Msa0338270:CDS | 40.0% | |
| !! | GCTCAGGTTTCTGAAGTTAA+AGG | + | chr2_4:58507148-58507167 | Msa0338270:intron | 40.0% |
| TGTAGAGAAAGAAGGAAGAG+GGG | - | chr2_4:58507492-58507511 | None:intergenic | 40.0% | |
| CTCTTAATCACTACCTGTAG+TGG | - | chr2_4:58507565-58507584 | None:intergenic | 40.0% | |
| GACTGGATTTGTCTCAAGTA+TGG | + | chr2_4:58507807-58507826 | Msa0338270:intron | 40.0% | |
| TGTGATACCATGCTGAAGTA+GGG | - | chr2_4:58508516-58508535 | None:intergenic | 40.0% | |
| ATGTGATACCATGCTGAAGT+AGG | - | chr2_4:58508517-58508536 | None:intergenic | 40.0% | |
| CACAAATGGAATAGCCTCAA+GGG | + | chr2_4:58508642-58508661 | Msa0338270:CDS | 40.0% | |
| !! | TGGTGTTGATCTCAAGAAAG+TGG | + | chr2_4:58508675-58508694 | Msa0338270:CDS | 40.0% |
| ATAGACAAAGCAGTATACCC+AGG | - | chr2_4:58508731-58508750 | None:intergenic | 40.0% | |
| GCTTTGTCTATTGCAACCAA+TGG | + | chr2_4:58508740-58508759 | Msa0338270:intron | 40.0% | |
| CATCCCCTATTCATGTGAAT+TGG | - | chr2_4:58509439-58509458 | None:intergenic | 40.0% | |
| CAATTCACATGAATAGGGGA+TGG | + | chr2_4:58509437-58509456 | Msa0338270:intron | 40.0% | |
| GATGTGTGAACCAAATTCAG+AGG | - | chr2_4:58509593-58509612 | None:intergenic | 40.0% | |
| ! | ATTGCTGCATGGGTTATGAT+AGG | + | chr2_4:58509764-58509783 | Msa0338270:intron | 40.0% |
| AGACTTGATTCCTGTGGATT+TGG | + | chr2_4:58509962-58509981 | Msa0338270:CDS | 40.0% | |
| AGAAGGTTTCTACAGGGTTA+TGG | + | chr2_4:58510022-58510041 | Msa0338270:CDS | 40.0% | |
| !!! | ATGGTTTTGTAGTAACCTGC+TGG | + | chr2_4:58510074-58510093 | Msa0338270:CDS | 40.0% |
| CAGAAATAGGGAAAGTGACG+GGG | + | chr2_4:58505696-58505715 | Msa0338270:intron | 45.0% | |
| AGAAATAGGGAAAGTGACGG+GGG | + | chr2_4:58505697-58505716 | Msa0338270:intron | 45.0% | |
| GGAGAAACAGAACGAGAGAA+GGG | + | chr2_4:58505718-58505737 | Msa0338270:CDS | 45.0% | |
| AAACAGAACGAGAGAAGGGA+GGG | + | chr2_4:58505722-58505741 | Msa0338270:CDS | 45.0% | |
| GAAGAAGGAAAAGAAGCCGA+TGG | + | chr2_4:58505751-58505770 | Msa0338270:CDS | 45.0% | |
| TGGGTAACCAAGAGGAAGAA+GGG | + | chr2_4:58505797-58505816 | Msa0338270:CDS | 45.0% | |
| CCAATTTCCCTTCTTCCTCT+TGG | - | chr2_4:58505807-58505826 | None:intergenic | 45.0% | |
| CCAAGAGGAAGAAGGGAAAT+TGG | + | chr2_4:58505804-58505823 | Msa0338270:CDS | 45.0% | |
| !! | ATGAACGAGTTGGTCTTGGT+TGG | + | chr2_4:58506303-58506322 | Msa0338270:intron | 45.0% |
| !! | TGAACGAGTTGGTCTTGGTT+GGG | + | chr2_4:58506304-58506323 | Msa0338270:intron | 45.0% |
| AGTATGGTAGGATGCCTTAC+TGG | - | chr2_4:58506353-58506372 | None:intergenic | 45.0% | |
| TTGGTACTGTTCTGTGCAGT+TGG | + | chr2_4:58506597-58506616 | Msa0338270:intron | 45.0% | |
| TGGTACTGTTCTGTGCAGTT+GGG | + | chr2_4:58506598-58506617 | Msa0338270:intron | 45.0% | |
| ! | GTGGTGACCAGAGTACTAAT+AGG | + | chr2_4:58506644-58506663 | Msa0338270:intron | 45.0% |
| !! | ATGCTGCTGCTTTAGTTCAC+TGG | + | chr2_4:58506786-58506805 | Msa0338270:intron | 45.0% |
| ! | TCCTCCCAATAGCCTTAACA+AGG | + | chr2_4:58506960-58506979 | Msa0338270:CDS | 45.0% |
| TCCTTGTTAAGGCTATTGGG+AGG | - | chr2_4:58506964-58506983 | None:intergenic | 45.0% | |
| CTTGCAAAGGTGAAAAGCTC+AGG | + | chr2_4:58507132-58507151 | Msa0338270:intron | 45.0% | |
| AGAGGGGATTAGAAGAGATG+AGG | - | chr2_4:58507476-58507495 | None:intergenic | 45.0% | |
| GATGAGCTTAGTTCCACTAC+AGG | + | chr2_4:58507549-58507568 | Msa0338270:intron | 45.0% | |
| CCTTGAGGCTATTCCATTTG+TGG | - | chr2_4:58508644-58508663 | None:intergenic | 45.0% | |
| CCACAAATGGAATAGCCTCA+AGG | + | chr2_4:58508641-58508660 | Msa0338270:CDS | 45.0% | |
| ACCATATCCATCAACCCTTG+AGG | - | chr2_4:58508659-58508678 | None:intergenic | 45.0% | |
| ! | AACATGGTTTGTAACTGGCC+TGG | + | chr2_4:58508710-58508729 | Msa0338270:intron | 45.0% |
| ! | ACATGGTTTGTAACTGGCCT+GGG | + | chr2_4:58508711-58508730 | Msa0338270:intron | 45.0% |
| GAGGCTGCACAATATCTTAG+AGG | - | chr2_4:58509165-58509184 | None:intergenic | 45.0% | |
| TCACATGAATAGGGGATGGA+AGG | + | chr2_4:58509441-58509460 | Msa0338270:intron | 45.0% | |
| ACTGCTGCATCTTATGCAAG+AGG | + | chr2_4:58509486-58509505 | Msa0338270:intron | 45.0% | |
| ATCGTATACTGCAGGCAAGA+AGG | + | chr2_4:58510005-58510024 | Msa0338270:CDS | 45.0% | |
| CAGGCAAGAAGGTTTCTACA+GGG | + | chr2_4:58510016-58510035 | Msa0338270:CDS | 45.0% | |
| CTACAGGGTTATGGTTGTGA+CGG | + | chr2_4:58510031-58510050 | Msa0338270:CDS | 45.0% | |
| ! | TTTTGTAGTAACCTGCTGGC+AGG | + | chr2_4:58510078-58510097 | Msa0338270:CDS | 45.0% |
| !! | TATAAAACAATATATAAATT+AGG | - | chr2_4:58507733-58507752 | None:intergenic | 5.0% |
| GGGAGAAACAGAACGAGAGA+AGG | + | chr2_4:58505717-58505736 | Msa0338270:CDS | 50.0% | |
| GAAACAGAACGAGAGAAGGG+AGG | + | chr2_4:58505721-58505740 | Msa0338270:CDS | 50.0% | |
| GGAAACAGTGGGTAACCAAG+AGG | + | chr2_4:58505789-58505808 | Msa0338270:CDS | 50.0% | |
| GTGGGTAACCAAGAGGAAGA+AGG | + | chr2_4:58505796-58505815 | Msa0338270:CDS | 50.0% | |
| ! | TGTGCAGTTGGGTATTGTGC+TGG | + | chr2_4:58506609-58506628 | Msa0338270:intron | 50.0% |
| ! | GTGCAGTTGGGTATTGTGCT+GGG | + | chr2_4:58506610-58506629 | Msa0338270:intron | 50.0% |
| ! | GTTGGGTATTGTGCTGGGAA+AGG | + | chr2_4:58506615-58506634 | Msa0338270:intron | 50.0% |
| !! | CTGCTGCTTTAGTTCACTGG+CGG | + | chr2_4:58506789-58506808 | Msa0338270:intron | 50.0% |
| ATCCTTGACACGCTCTCGAA+AGG | - | chr2_4:58506899-58506918 | None:intergenic | 50.0% | |
| ATGTGTCAACCTCTCTGCAC+AGG | + | chr2_4:58507052-58507071 | Msa0338270:intron | 50.0% | |
| TCTGCACAGGCCAAAGTTGA+AGG | + | chr2_4:58507065-58507084 | Msa0338270:intron | 50.0% | |
| ACAAGCACAACAGCAGAGGT+TGG | + | chr2_4:58507586-58507605 | Msa0338270:intron | 50.0% | |
| CAACAGCAGAGGTTGGACAA+AGG | + | chr2_4:58507593-58507612 | Msa0338270:intron | 50.0% | |
| TTGGCCTGATACGGCTGATA+CGG | + | chr2_4:58507785-58507804 | Msa0338270:intron | 50.0% | |
| GGATTTGGCCATAGATTCGG+AGG | + | chr2_4:58508310-58508329 | Msa0338270:intron | 50.0% | |
| GATGCTTCCCTACTTCAGCA+TGG | + | chr2_4:58508506-58508525 | Msa0338270:intron | 50.0% | |
| GGAATAGCCTCAAGGGTTGA+TGG | + | chr2_4:58508649-58508668 | Msa0338270:CDS | 50.0% | |
| !! | GCCTCAAGGGTTGATGGATA+TGG | + | chr2_4:58508655-58508674 | Msa0338270:CDS | 50.0% |
| GGGGACATTACCAAATCCAC+AGG | - | chr2_4:58509975-58509994 | None:intergenic | 50.0% | |
| GCAGGCAAGAAGGTTTCTAC+AGG | + | chr2_4:58510015-58510034 | Msa0338270:CDS | 50.0% | |
| CAACAACAGTGTGGAGAGCT+AGG | + | chr2_4:58510116-58510135 | Msa0338270:CDS | 50.0% | |
| AAGGGAGGGAGAGGAGAAGA+AGG | + | chr2_4:58505736-58505755 | Msa0338270:CDS | 55.0% | |
| GTGCTGGGAAAGGCTAAGAG+TGG | + | chr2_4:58506625-58506644 | Msa0338270:intron | 55.0% | |
| ACACGCTCTCGAAAGGCCAT+AGG | - | chr2_4:58506892-58506911 | None:intergenic | 55.0% | |
| CAACTTTGGCCTGTGCAGAG+AGG | - | chr2_4:58507064-58507083 | None:intergenic | 55.0% | |
| GAGCACAAGCACAACAGCAG+AGG | + | chr2_4:58507582-58507601 | Msa0338270:intron | 55.0% | |
| CAGTCCGTATCAGCCGTATC+AGG | - | chr2_4:58507792-58507811 | None:intergenic | 55.0% | |
| CTGATACGGCTGATACGGAC+TGG | + | chr2_4:58507790-58507809 | Msa0338270:intron | 55.0% | |
| TAGTAACCTGCTGGCAGGAC+AGG | + | chr2_4:58510083-58510102 | Msa0338270:CDS | 55.0% | |
| GAACGAGAGAAGGGAGGGAG+AGG | + | chr2_4:58505727-58505746 | Msa0338270:CDS | 60.0% | |
| ! | GGCCTTTCGAGAGCGTGTCA+AGG | + | chr2_4:58506894-58506913 | Msa0338270:CDS | 60.0% |
| CAAAGACCTGTCCTGCCAGC+AGG | - | chr2_4:58510092-58510111 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 58505647 | 58510144 | 58505647 | ID=Msa0338270;Name=Msa0338270 |
| chr2_4 | mRNA | 58505647 | 58510144 | 58505647 | ID=Msa0338270-mRNA-1;Parent=Msa0338270;Name=Msa0338270-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0|0|0.66|0.4|0.66|6|0|216 |
| chr2_4 | exon | 58505647 | 58505651 | 58505647 | ID=Msa0338270-mRNA-1:exon:18018;Parent=Msa0338270-mRNA-1 |
| chr2_4 | exon | 58505699 | 58505841 | 58505699 | ID=Msa0338270-mRNA-1:exon:18019;Parent=Msa0338270-mRNA-1 |
| chr2_4 | exon | 58506848 | 58506989 | 58506848 | ID=Msa0338270-mRNA-1:exon:18020;Parent=Msa0338270-mRNA-1 |
| chr2_4 | exon | 58507074 | 58507140 | 58507074 | ID=Msa0338270-mRNA-1:exon:18021;Parent=Msa0338270-mRNA-1 |
| chr2_4 | exon | 58508637 | 58508719 | 58508637 | ID=Msa0338270-mRNA-1:exon:18022;Parent=Msa0338270-mRNA-1 |
| chr2_4 | exon | 58509934 | 58510144 | 58509934 | ID=Msa0338270-mRNA-1:exon:18023;Parent=Msa0338270-mRNA-1 |
| chr2_4 | CDS | 58505647 | 58505651 | 58505647 | ID=Msa0338270-mRNA-1:cds;Parent=Msa0338270-mRNA-1 |
| chr2_4 | CDS | 58505699 | 58505841 | 58505699 | ID=Msa0338270-mRNA-1:cds;Parent=Msa0338270-mRNA-1 |
| chr2_4 | CDS | 58506848 | 58506989 | 58506848 | ID=Msa0338270-mRNA-1:cds;Parent=Msa0338270-mRNA-1 |
| chr2_4 | CDS | 58507074 | 58507140 | 58507074 | ID=Msa0338270-mRNA-1:cds;Parent=Msa0338270-mRNA-1 |
| chr2_4 | CDS | 58508637 | 58508719 | 58508637 | ID=Msa0338270-mRNA-1:cds;Parent=Msa0338270-mRNA-1 |
| chr2_4 | CDS | 58509934 | 58510144 | 58509934 | ID=Msa0338270-mRNA-1:cds;Parent=Msa0338270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
