Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931700 | AVR48489.1 | 76.042 | 96 | 20 | 2 | 93 | 187 | 68 | 161 | 1.86e-38 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931700 | sp|P47192|VA722_ARATH | 61.458 | 96 | 34 | 2 | 93 | 187 | 64 | 157 | 5.13e-30 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0931700 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0797560 | Msa0931700 | 0.891775 | 2.917998e-74 | -8.615850e-47 |
| Msa0338270 | Msa0931700 | 0.827088 | 1.897944e-54 | -8.615850e-47 |
| Msa0931700 | Msa1377680 | 0.995881 | 6.457798e-221 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931700 | MtrunA17_Chr2g0291651 | 75.000 | 96 | 21 | 2 | 93 | 187 | 68 | 161 | 3.34e-42 | 143 |
| Msa0931700 | MtrunA17_Chr5g0396491 | 89.855 | 69 | 7 | 0 | 191 | 259 | 413 | 481 | 6.00e-40 | 144 |
| Msa0931700 | MtrunA17_Chr4g0043521 | 67.708 | 96 | 28 | 2 | 93 | 187 | 66 | 159 | 7.75e-37 | 129 |
| Msa0931700 | MtrunA17_Chr4g0038851 | 71.014 | 69 | 20 | 0 | 191 | 259 | 404 | 472 | 3.14e-30 | 117 |
| Msa0931700 | MtrunA17_Chr4g0010211 | 55.670 | 97 | 40 | 2 | 92 | 187 | 2 | 96 | 2.60e-29 | 107 |
| Msa0931700 | MtrunA17_Chr4g0010271 | 57.292 | 96 | 38 | 2 | 93 | 187 | 64 | 157 | 4.60e-29 | 109 |
| Msa0931700 | MtrunA17_Chr1g0169851 | 66.197 | 71 | 24 | 0 | 93 | 163 | 15 | 85 | 8.40e-28 | 104 |
| Msa0931700 | MtrunA17_Chr7g0237521 | 66.197 | 71 | 24 | 0 | 93 | 163 | 64 | 134 | 1.42e-27 | 105 |
| Msa0931700 | MtrunA17_Chr1g0169861 | 57.292 | 96 | 38 | 2 | 93 | 187 | 114 | 207 | 1.85e-27 | 106 |
| Msa0931700 | MtrunA17_Chr7g0237561 | 55.208 | 96 | 40 | 2 | 93 | 187 | 64 | 157 | 3.42e-26 | 102 |
| Msa0931700 | MtrunA17_Chr2g0296021 | 60.563 | 71 | 28 | 0 | 93 | 163 | 64 | 134 | 2.89e-23 | 94.4 |
| Msa0931700 | MtrunA17_Chr1g0210521 | 39.130 | 115 | 48 | 4 | 93 | 187 | 64 | 176 | 1.52e-16 | 76.6 |
| Msa0931700 | MtrunA17_Chr3g0085681 | 45.588 | 68 | 36 | 1 | 191 | 258 | 372 | 438 | 1.24e-12 | 67.0 |
| Msa0931700 | MtrunA17_Chr7g0224271 | 35.632 | 87 | 49 | 2 | 175 | 256 | 589 | 673 | 3.46e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931700 | AT2G33120.1 | 61.458 | 96 | 34 | 2 | 93 | 187 | 64 | 157 | 5.22e-31 | 115 |
| Msa0931700 | AT2G33110.2 | 71.429 | 70 | 20 | 0 | 93 | 162 | 64 | 133 | 1.82e-30 | 112 |
| Msa0931700 | AT2G32670.1 | 76.056 | 71 | 17 | 0 | 93 | 163 | 129 | 199 | 1.87e-30 | 115 |
| Msa0931700 | AT1G04750.1 | 60.417 | 96 | 35 | 2 | 93 | 187 | 64 | 157 | 2.10e-30 | 113 |
| Msa0931700 | AT2G33120.2 | 60.417 | 96 | 35 | 2 | 93 | 187 | 72 | 165 | 2.44e-30 | 113 |
| Msa0931700 | AT2G33110.1 | 70.423 | 71 | 21 | 0 | 93 | 163 | 64 | 134 | 5.59e-30 | 112 |
| Msa0931700 | AT1G04760.2 | 73.239 | 71 | 19 | 0 | 93 | 163 | 64 | 134 | 9.89e-30 | 111 |
| Msa0931700 | AT1G04760.1 | 73.239 | 71 | 19 | 0 | 93 | 163 | 64 | 134 | 9.89e-30 | 111 |
| Msa0931700 | AT1G50420.1 | 66.667 | 69 | 23 | 0 | 191 | 259 | 414 | 482 | 1.75e-26 | 107 |
| Msa0931700 | AT4G15780.1 | 61.972 | 71 | 27 | 0 | 93 | 163 | 65 | 135 | 1.32e-23 | 94.7 |
| Msa0931700 | AT1G04750.2 | 59.259 | 81 | 30 | 2 | 108 | 187 | 1 | 79 | 4.06e-23 | 92.0 |
| Msa0931700 | AT1G04750.4 | 59.259 | 81 | 30 | 2 | 108 | 187 | 1 | 79 | 4.06e-23 | 92.0 |
| Msa0931700 | AT1G04750.3 | 59.259 | 81 | 30 | 2 | 108 | 187 | 1 | 79 | 4.06e-23 | 92.0 |
| Msa0931700 | AT3G54300.3 | 38.462 | 117 | 46 | 4 | 93 | 187 | 64 | 176 | 1.05e-14 | 72.0 |
| Msa0931700 | AT3G54300.2 | 38.462 | 117 | 46 | 4 | 93 | 187 | 64 | 176 | 1.05e-14 | 72.0 |
| Msa0931700 | AT3G54300.1 | 38.462 | 117 | 46 | 4 | 93 | 187 | 64 | 176 | 1.05e-14 | 72.0 |
Find 74 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCCTTGTTAAGGCTAT+TGG | 0.247487 | 6_2:-81364403 | None:intergenic |
| AATAGCCTTAACAAGGAGTT+TGG | 0.289067 | 6_2:+81364405 | Msa0931700:CDS |
| CCAAGAGGAAGAAGGGAAAT+TGG | 0.317265 | 6_2:+81363249 | Msa0931700:CDS |
| TGCATATGTTCCTTCAACTT+TGG | 0.333932 | 6_2:-81364513 | None:intergenic |
| CCAATTTCCCTTCTTCCTCT+TGG | 0.334831 | 6_2:-81363249 | None:intergenic |
| AACTCCTTGTTAAGGCTATT+GGG | 0.344900 | 6_2:-81364402 | None:intergenic |
| AGACTTGATTCCTGTGGATT+TGG | 0.369989 | 6_2:+81367402 | Msa0931700:CDS |
| AGAAGGTTTCTACAGGGTTA+TGG | 0.375050 | 6_2:+81367462 | Msa0931700:CDS |
| AAGGGAGGGAGAGGAGAAGA+AGG | 0.375659 | 6_2:+81363181 | Msa0931700:CDS |
| TGTGCAGCTGGGTATTGTGC+TGG | 0.380986 | 6_2:+81364047 | Msa0931700:intron |
| CCTTGAGGCTATTCCATTTG+TGG | 0.382802 | 6_2:-81366080 | None:intergenic |
| TATAGAATGAGAGAAGAAAA+TGG | 0.386659 | 6_2:+81367495 | Msa0931700:CDS |
| TTAATGCAGGTTACCACAAA+TGG | 0.394064 | 6_2:+81366067 | Msa0931700:intron |
| GCCTCAAGGGTTGATGGATA+TGG | 0.399274 | 6_2:+81366094 | Msa0931700:CDS |
| AGGGAAAGTGACGGGGAGAA+AGG | 0.415410 | 6_2:+81363128 | Msa0931700:CDS |
| TTATATGAACAAGTTGGTCT+TGG | 0.432226 | 6_2:+81363741 | Msa0931700:CDS |
| AAGAAAAGAAGAGGAAACAG+TGG | 0.433575 | 6_2:+81363222 | Msa0931700:CDS |
| CAGTATACGATAATAGCTTA+AGG | 0.434273 | 6_2:-81367433 | None:intergenic |
| TAGTAACCTGCTGGCAGGAC+AGG | 0.439719 | 6_2:+81367523 | Msa0931700:CDS |
| TGAACAAGTTGGTCTTGGTT+GGG | 0.442711 | 6_2:+81363746 | Msa0931700:CDS |
| GAACGAGAGAAGGGAGGGAG+AGG | 0.446128 | 6_2:+81363172 | Msa0931700:CDS |
| GGGGAGAAAGGGAAAGTGAC+GGG | 0.449423 | 6_2:+81363140 | Msa0931700:CDS |
| ATGAACAAGTTGGTCTTGGT+TGG | 0.452022 | 6_2:+81363745 | Msa0931700:CDS |
| GGGAAAGTGACGGGGAGAAA+GGG | 0.453924 | 6_2:+81363129 | Msa0931700:CDS |
| GGGAGAAAGGGAAAGTGACG+GGG | 0.454412 | 6_2:+81363141 | Msa0931700:CDS |
| AGGATATTATATGAACAAGT+TGG | 0.456734 | 6_2:+81363735 | Msa0931700:CDS |
| GGAATAGCCTCAAGGGTTGA+TGG | 0.463256 | 6_2:+81366088 | Msa0931700:CDS |
| AACTAGAAGACAGGTTCCTA+TGG | 0.467041 | 6_2:+81364311 | Msa0931700:CDS |
| GCAGGCAAGAAGGTTTCTAC+AGG | 0.468697 | 6_2:+81367455 | Msa0931700:CDS |
| GGGAGAAACAGAACGAGAGA+AGG | 0.471024 | 6_2:+81363162 | Msa0931700:CDS |
| CAACAACAGTGTGGAGAGCT+AGG | 0.475812 | 6_2:+81367556 | Msa0931700:CDS |
| TCTGCACAGGCCAAAGTTGA+AGG | 0.478923 | 6_2:+81364503 | Msa0931700:intron |
| AGTACCCAAACTCCTTGTTA+AGG | 0.484076 | 6_2:-81364410 | None:intergenic |
| ATCCTTGACACGCTCTAGAA+AGG | 0.487141 | 6_2:-81364334 | None:intergenic |
| GGAGAAACAGAACGAGAGAA+GGG | 0.497591 | 6_2:+81363163 | Msa0931700:CDS |
| ATAGCCTTAACAAGGAGTTT+GGG | 0.499292 | 6_2:+81364406 | Msa0931700:CDS |
| AGTATACGATAATAGCTTAA+GGG | 0.507427 | 6_2:-81367432 | None:intergenic |
| ACAGAAATAGGGAAAGTGAC+GGG | 0.510497 | 6_2:+81363120 | Msa0931700:intron |
| CAAAGACCTGTCCTGCCAGC+AGG | 0.516037 | 6_2:-81367529 | None:intergenic |
| AAACAGAACGAGAGAAGGGA+GGG | 0.518245 | 6_2:+81363167 | Msa0931700:CDS |
| GTGCAGCTGGGTATTGTGCT+GGG | 0.521168 | 6_2:+81364048 | Msa0931700:intron |
| GTCAAAATATGGTGGTGAAA+AGG | 0.526879 | 6_2:+81364365 | Msa0931700:CDS |
| GGAGAAAGGGAAAGTGACGG+GGG | 0.540858 | 6_2:+81363142 | Msa0931700:CDS |
| ATCGTATACTGCAGGCAAGA+AGG | 0.553817 | 6_2:+81367445 | Msa0931700:CDS |
| GTGGGTAACCAAGAGGAAGA+AGG | 0.555031 | 6_2:+81363241 | Msa0931700:CDS |
| CTACAGGGTTATGGTTGTGA+CGG | 0.558409 | 6_2:+81367471 | Msa0931700:CDS |
| GAAACAGAACGAGAGAAGGG+AGG | 0.558418 | 6_2:+81363166 | Msa0931700:CDS |
| GAAGAAGGAAAAGAAGCCGA+TGG | 0.563967 | 6_2:+81363196 | Msa0931700:CDS |
| TTGTTCATATAATATCCTAA+AGG | 0.569597 | 6_2:-81363730 | None:intergenic |
| AAGCTATTATCGTATACTGC+AGG | 0.573353 | 6_2:+81367437 | Msa0931700:CDS |
| AGAAAAGAAGAGGAAACAGT+GGG | 0.574477 | 6_2:+81363223 | Msa0931700:CDS |
| CACAAATGGAATAGCCTCAA+GGG | 0.574895 | 6_2:+81366081 | Msa0931700:CDS |
| GCTGGGTATTGTGCTGGGAA+AGG | 0.576415 | 6_2:+81364053 | Msa0931700:intron |
| CGATGGAGAAAGAAAAGAAG+AGG | 0.576550 | 6_2:+81363213 | Msa0931700:CDS |
| AAATTGGAGAAGAATATTCA+AGG | 0.576564 | 6_2:+81363265 | Msa0931700:CDS |
| TGGTGTTGATCTCAAGAAAG+TGG | 0.588028 | 6_2:+81366114 | Msa0931700:CDS |
| AGATGAATCAACTAGAAGAC+AGG | 0.588785 | 6_2:+81364302 | Msa0931700:CDS |
| CCACAAATGGAATAGCCTCA+AGG | 0.595503 | 6_2:+81366080 | Msa0931700:CDS |
| TGGGTAACCAAGAGGAAGAA+GGG | 0.601125 | 6_2:+81363242 | Msa0931700:CDS |
| GGGGACATTACCAAATCCAC+AGG | 0.602260 | 6_2:-81367412 | None:intergenic |
| GTATACGATAATAGCTTAAG+GGG | 0.604591 | 6_2:-81367431 | None:intergenic |
| TACAGAAATAGGGAAAGTGA+CGG | 0.610620 | 6_2:+81363119 | Msa0931700:intron |
| CAAGATAAGCAAGCTTGCAA+AGG | 0.611690 | 6_2:+81364557 | Msa0931700:CDS |
| TCCTCCCAATAGCCTTAACA+AGG | 0.621229 | 6_2:+81364398 | Msa0931700:CDS |
| CAGAAATAGGGAAAGTGACG+GGG | 0.627024 | 6_2:+81363121 | Msa0931700:intron |
| GGCCTTTCTAGAGCGTGTCA+AGG | 0.628423 | 6_2:+81364332 | Msa0931700:CDS |
| CGGGGAGAAAGGGAAAGTGA+CGG | 0.630391 | 6_2:+81363139 | Msa0931700:CDS |
| TCCTTGTTAAGGCTATTGGG+AGG | 0.643952 | 6_2:-81364399 | None:intergenic |
| CAGGCAAGAAGGTTTCTACA+GGG | 0.650713 | 6_2:+81367456 | Msa0931700:CDS |
| TTTATGAGACTTGATTCCTG+TGG | 0.650871 | 6_2:+81367396 | Msa0931700:CDS |
| ACACGCTCTAGAAAGGCCAT+AGG | 0.658618 | 6_2:-81364327 | None:intergenic |
| GGAAACAGTGGGTAACCAAG+AGG | 0.685707 | 6_2:+81363234 | Msa0931700:CDS |
| ACCATATCCATCAACCCTTG+AGG | 0.687454 | 6_2:-81366095 | None:intergenic |
| GTGCTGGGAAAGGCTAAGAG+TGG | 0.721903 | 6_2:+81364063 | Msa0931700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTCTATAAATATTTC+TGG | + | chr6_2:81365923-81365942 | Msa0931700:intron | 10.0% |
| !! | ATTGTAAGAAAATAAAAAAA+AGG | - | chr6_2:81366682-81366701 | None:intergenic | 10.0% |
| !!! | TATAAAATTGATTACCTTTT+TGG | + | chr6_2:81364769-81364788 | Msa0931700:intron | 15.0% |
| !! | AAAATTACTATCTACAATTT+AGG | - | chr6_2:81365317-81365336 | None:intergenic | 15.0% |
| !!! | TAATTTTGACCAAAATAATT+TGG | + | chr6_2:81365330-81365349 | Msa0931700:intron | 15.0% |
| !! | AGATAAAATTCAAATGAAAT+GGG | - | chr6_2:81365825-81365844 | None:intergenic | 15.0% |
| !! | TAGATAAAATTCAAATGAAA+TGG | - | chr6_2:81365826-81365845 | None:intergenic | 15.0% |
| !! | ATTTGAATTGATAAATAGTA+GGG | - | chr6_2:81365887-81365906 | None:intergenic | 15.0% |
| !! | TATTTGAATTGATAAATAGT+AGG | - | chr6_2:81365888-81365907 | None:intergenic | 15.0% |
| !!! | ACTCTATTTATTTTAAGTAT+AGG | - | chr6_2:81366041-81366060 | None:intergenic | 15.0% |
| !! | CTATAAAACAAATCAAAAAA+GGG | - | chr6_2:81366304-81366323 | None:intergenic | 15.0% |
| !!! | CTTTTTTGATTTGTTTTATA+GGG | + | chr6_2:81366303-81366322 | Msa0931700:intron | 15.0% |
| !! | AAATCAAAAACTAAAATTTG+GGG | - | chr6_2:81366354-81366373 | None:intergenic | 15.0% |
| !! | CAAATCAAAAACTAAAATTT+GGG | - | chr6_2:81366355-81366374 | None:intergenic | 15.0% |
| !! | ACAAATCAAAAACTAAAATT+TGG | - | chr6_2:81366356-81366375 | None:intergenic | 15.0% |
| !!! | AGTTTTTGATTTGTTTTATT+CGG | + | chr6_2:81366362-81366381 | Msa0931700:intron | 15.0% |
| !!! | AGTTTGATTTTAAAATTAGA+AGG | - | chr6_2:81366573-81366592 | None:intergenic | 15.0% |
| !!! | GATTTTGATACATTTTTTTA+TGG | + | chr6_2:81367236-81367255 | Msa0931700:intron | 15.0% |
| !! | AATTGATTGATGAATAATAT+CGG | - | chr6_2:81367343-81367362 | None:intergenic | 15.0% |
| !!! | TTGTGATTTTATACAGAAAT+AGG | + | chr6_2:81363108-81363127 | Msa0931700:intron | 20.0% |
| !!! | TGTGATTTTATACAGAAATA+GGG | + | chr6_2:81363109-81363128 | Msa0931700:intron | 20.0% |
| !!! | TATTTTTGTTTTTGCTTTTG+TGG | + | chr6_2:81363417-81363436 | Msa0931700:intron | 20.0% |
| !!! | TTTTTTGTTGATTCTGTTTT+TGG | + | chr6_2:81363458-81363477 | Msa0931700:intron | 20.0% |
| !! | TTTGTGAAATTGACTAAAAT+TGG | + | chr6_2:81363583-81363602 | Msa0931700:intron | 20.0% |
| !! | GTAAAAATAGAATTTCATAC+TGG | - | chr6_2:81363704-81363723 | None:intergenic | 20.0% |
| !! | TTGTTCATATAATATCCTAA+AGG | - | chr6_2:81363733-81363752 | None:intergenic | 20.0% |
| !! | ATTCAATTACCACATATTAA+AGG | - | chr6_2:81363997-81364016 | None:intergenic | 20.0% |
| !! | TACCAAATAAACTTGTAAAA+GGG | - | chr6_2:81364021-81364040 | None:intergenic | 20.0% |
| !! | TAAGATGATAATTTCCTTTA+TGG | - | chr6_2:81364127-81364146 | None:intergenic | 20.0% |
| !! | TTTGATGGGATAAAAATTTA+TGG | + | chr6_2:81364831-81364850 | Msa0931700:intron | 20.0% |
| !! | TTGATGGGATAAAAATTTAT+GGG | + | chr6_2:81364832-81364851 | Msa0931700:intron | 20.0% |
| !! | GAAAATAAAAAAGAATGAAG+GGG | - | chr6_2:81365142-81365161 | None:intergenic | 20.0% |
| !! | GGAAAATAAAAAAGAATGAA+GGG | - | chr6_2:81365143-81365162 | None:intergenic | 20.0% |
| !! | AGGAAAATAAAAAAGAATGA+AGG | - | chr6_2:81365144-81365163 | None:intergenic | 20.0% |
| !! | AATATATAAATTAGGCTCAA+AGG | - | chr6_2:81365164-81365183 | None:intergenic | 20.0% |
| !! | ATATACATTCATTTAACCAT+TGG | + | chr6_2:81365189-81365208 | Msa0931700:intron | 20.0% |
| !! | CACTACTTAATTAATCAATA+AGG | + | chr6_2:81365540-81365559 | Msa0931700:intron | 20.0% |
| !!! | TATTGATTCTTAGTTAATTG+AGG | + | chr6_2:81365581-81365600 | Msa0931700:intron | 20.0% |
| !!! | TTTTATCTTTGTTGTTAGTT+TGG | + | chr6_2:81365728-81365747 | Msa0931700:intron | 20.0% |
| !! | CCTATAAAACAAATCAAAAA+AGG | - | chr6_2:81366305-81366324 | None:intergenic | 20.0% |
| !!! | CCTTTTTTGATTTGTTTTAT+AGG | + | chr6_2:81366302-81366321 | Msa0931700:intron | 20.0% |
| !!! | TTATTTTCTTACAATTTTGC+AGG | + | chr6_2:81366687-81366706 | Msa0931700:intron | 20.0% |
| !! | GCAATAGTAAATGTATAAAA+AGG | + | chr6_2:81367171-81367190 | Msa0931700:intron | 20.0% |
| !!! | TTGATACATTTTTTTATGGT+TGG | + | chr6_2:81367240-81367259 | Msa0931700:intron | 20.0% |
| !!! | AGTTTTTCATGTCTTTATTA+GGG | - | chr6_2:81367366-81367385 | None:intergenic | 20.0% |
| !!! | AAGTTTTTCATGTCTTTATT+AGG | - | chr6_2:81367367-81367386 | None:intergenic | 20.0% |
| ! | AAATTGGAGAAGAATATTCA+AGG | + | chr6_2:81363265-81363284 | Msa0931700:CDS | 25.0% |
| !! | CTTGATGACTTAAAAATTGA+TGG | + | chr6_2:81363624-81363643 | Msa0931700:intron | 25.0% |
| !!! | TGAAATTCTATTTTTACTGC+AGG | + | chr6_2:81363707-81363726 | Msa0931700:intron | 25.0% |
| ! | AGGATATTATATGAACAAGT+TGG | + | chr6_2:81363735-81363754 | Msa0931700:CDS | 25.0% |
| !!! | TACTGGTTCATATTTTGTAA+TGG | - | chr6_2:81363778-81363797 | None:intergenic | 25.0% |
| !!! | TTTTTTCCTAATCATTCTGA+TGG | + | chr6_2:81363899-81363918 | Msa0931700:intron | 25.0% |
| !!! | TGATGGAGAATTGTTTTTAA+AGG | + | chr6_2:81363916-81363935 | Msa0931700:intron | 25.0% |
| ! | AATCTTAATATCAAGCTCTT+GGG | - | chr6_2:81363955-81363974 | None:intergenic | 25.0% |
| ! | AAATCTTAATATCAAGCTCT+TGG | - | chr6_2:81363956-81363975 | None:intergenic | 25.0% |
| !! | TTCCCTTTTACAAGTTTATT+TGG | + | chr6_2:81364016-81364035 | Msa0931700:intron | 25.0% |
| ! | GTACCAAATAAACTTGTAAA+AGG | - | chr6_2:81364022-81364041 | None:intergenic | 25.0% |
| ! | TAATAGGAGATTATCATCTT+AGG | + | chr6_2:81364098-81364117 | Msa0931700:intron | 25.0% |
| !! | AGAAGAAATGTCTAACTTTT+TGG | + | chr6_2:81364255-81364274 | Msa0931700:intron | 25.0% |
| !! | GAAGAAATGTCTAACTTTTT+GGG | + | chr6_2:81364256-81364275 | Msa0931700:intron | 25.0% |
| !! | GATGATTTTGTGTCAAAATA+TGG | + | chr6_2:81364354-81364373 | Msa0931700:CDS | 25.0% |
| !!! | TAAACTTTTGGAGTTTAATC+TGG | + | chr6_2:81364445-81364464 | Msa0931700:intron | 25.0% |
| !! | CTGGTAGACTATTTATATTT+TGG | + | chr6_2:81364464-81364483 | Msa0931700:intron | 25.0% |
| !!! | TACCTTTTTGGTTATATCAT+TGG | + | chr6_2:81364781-81364800 | Msa0931700:intron | 25.0% |
| ! | TGCTTGAATTGTTTATTTGA+TGG | + | chr6_2:81364816-81364835 | Msa0931700:intron | 25.0% |
| ! | GCTTGAATTGTTTATTTGAT+GGG | + | chr6_2:81364817-81364836 | Msa0931700:intron | 25.0% |
| ! | AAAGAAAATGTAGAGAAAGA+AGG | - | chr6_2:81364938-81364957 | None:intergenic | 25.0% |
| ! | TTCGAACATTAAGAAAAGAA+GGG | - | chr6_2:81365111-81365130 | None:intergenic | 25.0% |
| ! | ATTCGAACATTAAGAAAAGA+AGG | - | chr6_2:81365112-81365131 | None:intergenic | 25.0% |
| ! | TTGAAAGCTAGTTAGAAAAA+AGG | - | chr6_2:81365431-81365450 | None:intergenic | 25.0% |
| ! | ATAAGGCAGTAAACAATTAT+TGG | + | chr6_2:81365557-81365576 | Msa0931700:intron | 25.0% |
| ! | ATTATTTGAATCATTCGCTA+TGG | + | chr6_2:81365605-81365624 | Msa0931700:intron | 25.0% |
| ! | AACAACCAAATGTATCAAAA+AGG | - | chr6_2:81365797-81365816 | None:intergenic | 25.0% |
| !! | TATTATGACATTTTTGCAAG+AGG | - | chr6_2:81366223-81366242 | None:intergenic | 25.0% |
| !! | ACAATTTTGCAGGTTTTTTA+TGG | + | chr6_2:81366697-81366716 | Msa0931700:intron | 25.0% |
| !! | TTTTATGGAGAAATTCAGAT+TGG | + | chr6_2:81366712-81366731 | Msa0931700:intron | 25.0% |
| ! | AATAGCAACTTACAAATATG+AGG | - | chr6_2:81366974-81366993 | None:intergenic | 25.0% |
| ! | TATCCTTTCATTCAATCATA+TGG | + | chr6_2:81367096-81367115 | Msa0931700:intron | 25.0% |
| ! | TAGCAATTAAATTGTTGCAT+GGG | + | chr6_2:81367194-81367213 | Msa0931700:intron | 25.0% |
| ! | GTGTACAAACTTGATAAAAA+AGG | + | chr6_2:81367315-81367334 | Msa0931700:intron | 25.0% |
| ! | GACATGAAAAACTTCATAAA+TGG | + | chr6_2:81367373-81367392 | Msa0931700:intron | 25.0% |
| ! | AGTATACGATAATAGCTTAA+GGG | - | chr6_2:81367435-81367454 | None:intergenic | 25.0% |
| ! | TATAGAATGAGAGAAGAAAA+TGG | + | chr6_2:81367495-81367514 | Msa0931700:CDS | 25.0% |
| ! | GTGATTTCTTGCTATATTGT+GGG | + | chr6_2:81363287-81363306 | Msa0931700:intron | 30.0% |
| ATATTGTGGGAATGCATAAT+TGG | + | chr6_2:81363300-81363319 | Msa0931700:intron | 30.0% | |
| TGGCTTATGATGAATATTCA+AGG | + | chr6_2:81363320-81363339 | Msa0931700:intron | 30.0% | |
| !!! | TTGTTTTTGCTTTTGTGGTT+TGG | + | chr6_2:81363422-81363441 | Msa0931700:intron | 30.0% |
| !!! | TTTTGAGATGAAATCACACT+TGG | + | chr6_2:81363540-81363559 | Msa0931700:intron | 30.0% |
| CTTGGTATAAATTGCACATA+AGG | + | chr6_2:81363558-81363577 | Msa0931700:intron | 30.0% | |
| TGATATATGAATCTGTTCAG+TGG | + | chr6_2:81363664-81363683 | Msa0931700:intron | 30.0% | |
| !! | TTATATGAACAAGTTGGTCT+TGG | + | chr6_2:81363741-81363760 | Msa0931700:CDS | 30.0% |
| CTATTCCATCTTTCTAAGTA+TGG | - | chr6_2:81363811-81363830 | None:intergenic | 30.0% | |
| AATTCTCCATCAGAATGATT+AGG | - | chr6_2:81363908-81363927 | None:intergenic | 30.0% | |
| CACAATGTTCCTTTAATATG+TGG | + | chr6_2:81363985-81364004 | Msa0931700:intron | 30.0% | |
| ATAATCTCCTATTAGTACTC+TGG | - | chr6_2:81364092-81364111 | None:intergenic | 30.0% | |
| ATCATCTTAGGTAACCATAA+AGG | + | chr6_2:81364110-81364129 | Msa0931700:intron | 30.0% | |
| ! | GATTTTGTGTCAAAATATGG+TGG | + | chr6_2:81364357-81364376 | Msa0931700:CDS | 30.0% |
| !! | AACTTTCTGCTCTAAACTTT+TGG | + | chr6_2:81364433-81364452 | Msa0931700:intron | 30.0% |
| ! | CATGATGGAGAATATTGAAA+AGG | + | chr6_2:81364612-81364631 | Msa0931700:intron | 30.0% |
| TCAAGTCAATGTTATCATAG+AGG | + | chr6_2:81364656-81364675 | Msa0931700:intron | 30.0% | |
| TCATTGATGAGAATTGATAG+AGG | + | chr6_2:81364682-81364701 | Msa0931700:intron | 30.0% | |
| CACCAATGATATAACCAAAA+AGG | - | chr6_2:81364786-81364805 | None:intergenic | 30.0% | |
| TCGAACATTAAGAAAAGAAG+GGG | - | chr6_2:81365110-81365129 | None:intergenic | 30.0% | |
| CCAAAATTCAGAAATTCCAA+TGG | - | chr6_2:81365208-81365227 | None:intergenic | 30.0% | |
| ! | CCATTGGAATTTCTGAATTT+TGG | + | chr6_2:81365205-81365224 | Msa0931700:intron | 30.0% |
| ! | CATAGTCAAGATAACTTTTC+AGG | - | chr6_2:81365360-81365379 | None:intergenic | 30.0% |
| TTCTATTAATTGCCTCACTA+TGG | + | chr6_2:81365405-81365424 | Msa0931700:intron | 30.0% | |
| TTAACTACAGTAGAGATTCT+TGG | + | chr6_2:81365466-81365485 | Msa0931700:intron | 30.0% | |
| AAATCATTAGAGAAATGCCA+AGG | - | chr6_2:81365634-81365653 | None:intergenic | 30.0% | |
| !! | CTTTGTTGTTAGTTTGGATT+TGG | + | chr6_2:81365734-81365753 | Msa0931700:intron | 30.0% |
| CCAAATGTATCAAAAAGGAT+AGG | - | chr6_2:81365792-81365811 | None:intergenic | 30.0% | |
| ! | CCTATCCTTTTTGATACATT+TGG | + | chr6_2:81365789-81365808 | Msa0931700:intron | 30.0% |
| ! | ATAGAGTTTTTCCTTAATGC+AGG | + | chr6_2:81366054-81366073 | Msa0931700:intron | 30.0% |
| !! | TGAATGAGACTGATTTTCTT+AGG | + | chr6_2:81366257-81366276 | Msa0931700:intron | 30.0% |
| !! | GAATGAGACTGATTTTCTTA+GGG | + | chr6_2:81366258-81366277 | Msa0931700:intron | 30.0% |
| GTTAGCATTGTTATCACAAT+TGG | - | chr6_2:81366481-81366500 | None:intergenic | 30.0% | |
| ! | ATGCTAACATCATTTTCCAT+TGG | + | chr6_2:81366493-81366512 | Msa0931700:intron | 30.0% |
| TAGTAAAATGTCCTCTTTCT+AGG | + | chr6_2:81366516-81366535 | Msa0931700:intron | 30.0% | |
| AATTCAGATTGGTACTCATT+TGG | + | chr6_2:81366723-81366742 | Msa0931700:intron | 30.0% | |
| ATTCAGATTGGTACTCATTT+GGG | + | chr6_2:81366724-81366743 | Msa0931700:intron | 30.0% | |
| ACATTCAACACATACAAATC+AGG | - | chr6_2:81366832-81366851 | None:intergenic | 30.0% | |
| ! | GTATGTGTTGAATGTTGTTT+AGG | + | chr6_2:81366837-81366856 | Msa0931700:intron | 30.0% |
| ACACCATATGATTGAATGAA+AGG | - | chr6_2:81367102-81367121 | None:intergenic | 30.0% | |
| ! | ACTGTAAATACACTTTTGCT+AGG | - | chr6_2:81367130-81367149 | None:intergenic | 30.0% |
| GTAGCAATTAAATTGTTGCA+TGG | + | chr6_2:81367193-81367212 | Msa0931700:intron | 30.0% | |
| GTATACGATAATAGCTTAAG+GGG | - | chr6_2:81367434-81367453 | None:intergenic | 30.0% | |
| CAGTATACGATAATAGCTTA+AGG | - | chr6_2:81367436-81367455 | None:intergenic | 30.0% | |
| TACAGAAATAGGGAAAGTGA+CGG | + | chr6_2:81363119-81363138 | Msa0931700:intron | 35.0% | |
| ! | CTCTTCTTTTCTTTCTCCAT+CGG | - | chr6_2:81363215-81363234 | None:intergenic | 35.0% |
| AAGAAAAGAAGAGGAAACAG+TGG | + | chr6_2:81363222-81363241 | Msa0931700:CDS | 35.0% | |
| AGAAAAGAAGAGGAAACAGT+GGG | + | chr6_2:81363223-81363242 | Msa0931700:CDS | 35.0% | |
| ! | GGTGATTTCTTGCTATATTG+TGG | + | chr6_2:81363286-81363305 | Msa0931700:intron | 35.0% |
| !! | TATTTTTACTGCAGGCCTTT+AGG | + | chr6_2:81363715-81363734 | Msa0931700:intron | 35.0% |
| TCCTACCATACTTAGAAAGA+TGG | + | chr6_2:81363803-81363822 | Msa0931700:intron | 35.0% | |
| TCCATCTTTCTAAGTATGGT+AGG | - | chr6_2:81363807-81363826 | None:intergenic | 35.0% | |
| ! | TCCAGCATTTATGTTTTCAG+AGG | + | chr6_2:81364155-81364174 | Msa0931700:intron | 35.0% |
| ! | ACCTCTGAAAACATAAATGC+TGG | - | chr6_2:81364159-81364178 | None:intergenic | 35.0% |
| AGATGAATCAACTAGAAGAC+AGG | + | chr6_2:81364302-81364321 | Msa0931700:CDS | 35.0% | |
| ! | GTCAAAATATGGTGGTGAAA+AGG | + | chr6_2:81364365-81364384 | Msa0931700:CDS | 35.0% |
| AACTCCTTGTTAAGGCTATT+GGG | - | chr6_2:81364405-81364424 | None:intergenic | 35.0% | |
| AAACTCCTTGTTAAGGCTAT+TGG | - | chr6_2:81364406-81364425 | None:intergenic | 35.0% | |
| ! | AATAGCCTTAACAAGGAGTT+TGG | + | chr6_2:81364405-81364424 | Msa0931700:CDS | 35.0% |
| ! | ATAGCCTTAACAAGGAGTTT+GGG | + | chr6_2:81364406-81364425 | Msa0931700:CDS | 35.0% |
| TGCATATGTTCCTTCAACTT+TGG | - | chr6_2:81364516-81364535 | None:intergenic | 35.0% | |
| !! | TGAAGTTAAAGGTGTCATGA+TGG | + | chr6_2:81364597-81364616 | Msa0931700:intron | 35.0% |
| TGCTAATTCTCTAACACAGA+TGG | + | chr6_2:81364724-81364743 | Msa0931700:intron | 35.0% | |
| !!! | CTCTAACACAGATGGTTTTT+TGG | + | chr6_2:81364732-81364751 | Msa0931700:intron | 35.0% |
| ATGTAGAGAAAGAAGGAAGA+GGG | - | chr6_2:81364931-81364950 | None:intergenic | 35.0% | |
| AATGTAGAGAAAGAAGGAAG+AGG | - | chr6_2:81364932-81364951 | None:intergenic | 35.0% | |
| !! | TTCTGAATTTTGGCCTGATA+CGG | + | chr6_2:81365215-81365234 | Msa0931700:intron | 35.0% |
| ! | TCAGGCACACCAAATTATTT+TGG | - | chr6_2:81365342-81365361 | None:intergenic | 35.0% |
| TTAGAAAAAAGGCCATAGTG+AGG | - | chr6_2:81365420-81365439 | None:intergenic | 35.0% | |
| TTTGGATTTGGCCATAGATT+CGG | + | chr6_2:81365746-81365765 | Msa0931700:intron | 35.0% | |
| ATTAAACTCCTCCGAATCTA+TGG | - | chr6_2:81365760-81365779 | None:intergenic | 35.0% | |
| ATTTGTGGTAACCTGCATTA+AGG | - | chr6_2:81366068-81366087 | None:intergenic | 35.0% | |
| TTAATGCAGGTTACCACAAA+TGG | + | chr6_2:81366067-81366086 | Msa0931700:intron | 35.0% | |
| GTGGTAGAAAAAGTAGAACA+TGG | + | chr6_2:81366133-81366152 | Msa0931700:CDS | 35.0% | |
| ! | AGTAGAACATGGTTTGTAAC+TGG | + | chr6_2:81366144-81366163 | Msa0931700:intron | 35.0% |
| ACAAATACTCAAGAAGCCAT+TGG | - | chr6_2:81366198-81366217 | None:intergenic | 35.0% | |
| ! | ACTAAAATTTGGGGTTCAAC+TGG | - | chr6_2:81366345-81366364 | None:intergenic | 35.0% |
| ! | AGAGGACATTTTACTACCAA+TGG | - | chr6_2:81366512-81366531 | None:intergenic | 35.0% |
| TAACAAACTCTCCTAGAAAG+AGG | - | chr6_2:81366530-81366549 | None:intergenic | 35.0% | |
| ACAGACTTATCACAATTGAG+AGG | - | chr6_2:81366624-81366643 | None:intergenic | 35.0% | |
| !!! | ATTTGGGAAGTTGTTTTTGC+AGG | + | chr6_2:81366740-81366759 | Msa0931700:intron | 35.0% |
| CATACAAATCAGGACATATG+AGG | - | chr6_2:81366822-81366841 | None:intergenic | 35.0% | |
| ! | TGTGTTGAATGTTGTTTAGG+AGG | + | chr6_2:81366840-81366859 | Msa0931700:intron | 35.0% |
| ! | GTGTTGAATGTTGTTTAGGA+GGG | + | chr6_2:81366841-81366860 | Msa0931700:intron | 35.0% |
| ! | TGTTGAATGTTGTTTAGGAG+GGG | + | chr6_2:81366842-81366861 | Msa0931700:intron | 35.0% |
| TGCTTCCAATTCACATGAAT+AGG | + | chr6_2:81366871-81366890 | Msa0931700:intron | 35.0% | |
| GCTTCCAATTCACATGAATA+GGG | + | chr6_2:81366872-81366891 | Msa0931700:intron | 35.0% | |
| CTTCCAATTCACATGAATAG+GGG | + | chr6_2:81366873-81366892 | Msa0931700:intron | 35.0% | |
| TAGTTACATGCCTCTGAATT+TGG | + | chr6_2:81367020-81367039 | Msa0931700:intron | 35.0% | |
| ! | ATTGTTGCATGGGTTATGAT+AGG | + | chr6_2:81367204-81367223 | Msa0931700:intron | 35.0% |
| TTTATGAGACTTGATTCCTG+TGG | + | chr6_2:81367396-81367415 | Msa0931700:CDS | 35.0% | |
| AAGCTATTATCGTATACTGC+AGG | + | chr6_2:81367437-81367456 | Msa0931700:CDS | 35.0% | |
| !!! | CTTTGTTTTCAACAACAGTG+TGG | + | chr6_2:81367547-81367566 | Msa0931700:CDS | 35.0% |
| ACAGAAATAGGGAAAGTGAC+GGG | + | chr6_2:81363120-81363139 | Msa0931700:intron | 40.0% | |
| CGATGGAGAAAGAAAAGAAG+AGG | + | chr6_2:81363213-81363232 | Msa0931700:CDS | 40.0% | |
| ! | CATTCAATCTGAGACATGCA+TGG | - | chr6_2:81363376-81363395 | None:intergenic | 40.0% |
| !! | ATGAACAAGTTGGTCTTGGT+TGG | + | chr6_2:81363745-81363764 | Msa0931700:CDS | 40.0% |
| !! | TGAACAAGTTGGTCTTGGTT+GGG | + | chr6_2:81363746-81363765 | Msa0931700:CDS | 40.0% |
| AGTATGGTAGGATGACTTAC+TGG | - | chr6_2:81363795-81363814 | None:intergenic | 40.0% | |
| AACTAGAAGACAGGTTCCTA+TGG | + | chr6_2:81364311-81364330 | Msa0931700:CDS | 40.0% | |
| AGTACCCAAACTCCTTGTTA+AGG | - | chr6_2:81364413-81364432 | None:intergenic | 40.0% | |
| CAAGATAAGCAAGCTTGCAA+AGG | + | chr6_2:81364557-81364576 | Msa0931700:CDS | 40.0% | |
| !! | GCTCAGGTTTCTGAAGTTAA+AGG | + | chr6_2:81364586-81364605 | Msa0931700:intron | 40.0% |
| TGTAGAGAAAGAAGGAAGAG+GGG | - | chr6_2:81364930-81364949 | None:intergenic | 40.0% | |
| CTCTTAATCACTACCTGTAG+TGG | - | chr6_2:81365004-81365023 | None:intergenic | 40.0% | |
| GACTGGATTTGTCTCAAGTA+TGG | + | chr6_2:81365246-81365265 | Msa0931700:intron | 40.0% | |
| ATCATTCGCTATGGTTTCCT+TGG | + | chr6_2:81365614-81365633 | Msa0931700:intron | 40.0% | |
| TGTGATACCATGCTGAAGTA+GGG | - | chr6_2:81365955-81365974 | None:intergenic | 40.0% | |
| ATGTGATACCATGCTGAAGT+AGG | - | chr6_2:81365956-81365975 | None:intergenic | 40.0% | |
| CACAAATGGAATAGCCTCAA+GGG | + | chr6_2:81366081-81366100 | Msa0931700:CDS | 40.0% | |
| !! | TGGTGTTGATCTCAAGAAAG+TGG | + | chr6_2:81366114-81366133 | Msa0931700:CDS | 40.0% |
| ATAGACAAAGCAGTATACCC+AGG | - | chr6_2:81366170-81366189 | None:intergenic | 40.0% | |
| GCTTTGTCTATTGCAACCAA+TGG | + | chr6_2:81366179-81366198 | Msa0931700:intron | 40.0% | |
| CATCCCCTATTCATGTGAAT+TGG | - | chr6_2:81366879-81366898 | None:intergenic | 40.0% | |
| CAATTCACATGAATAGGGGA+TGG | + | chr6_2:81366877-81366896 | Msa0931700:intron | 40.0% | |
| GATGTGTGAACCAAATTCAG+AGG | - | chr6_2:81367033-81367052 | None:intergenic | 40.0% | |
| AGACTTGATTCCTGTGGATT+TGG | + | chr6_2:81367402-81367421 | Msa0931700:CDS | 40.0% | |
| AGAAGGTTTCTACAGGGTTA+TGG | + | chr6_2:81367462-81367481 | Msa0931700:CDS | 40.0% | |
| !!! | ATGGTTTTGTAGTAACCTGC+TGG | + | chr6_2:81367514-81367533 | Msa0931700:CDS | 40.0% |
| CAGAAATAGGGAAAGTGACG+GGG | + | chr6_2:81363121-81363140 | Msa0931700:intron | 45.0% | |
| GGAGAAACAGAACGAGAGAA+GGG | + | chr6_2:81363163-81363182 | Msa0931700:CDS | 45.0% | |
| AAACAGAACGAGAGAAGGGA+GGG | + | chr6_2:81363167-81363186 | Msa0931700:CDS | 45.0% | |
| GAAGAAGGAAAAGAAGCCGA+TGG | + | chr6_2:81363196-81363215 | Msa0931700:CDS | 45.0% | |
| TGGGTAACCAAGAGGAAGAA+GGG | + | chr6_2:81363242-81363261 | Msa0931700:CDS | 45.0% | |
| CCAATTTCCCTTCTTCCTCT+TGG | - | chr6_2:81363252-81363271 | None:intergenic | 45.0% | |
| CCAAGAGGAAGAAGGGAAAT+TGG | + | chr6_2:81363249-81363268 | Msa0931700:CDS | 45.0% | |
| ! | GTGGTGACCAGAGTACTAAT+AGG | + | chr6_2:81364082-81364101 | Msa0931700:intron | 45.0% |
| !! | ATGCTGCTGCTTTAGTTCAC+TGG | + | chr6_2:81364224-81364243 | Msa0931700:intron | 45.0% |
| !! | ATCCTTGACACGCTCTAGAA+AGG | - | chr6_2:81364337-81364356 | None:intergenic | 45.0% |
| ! | TCCTCCCAATAGCCTTAACA+AGG | + | chr6_2:81364398-81364417 | Msa0931700:CDS | 45.0% |
| TCCTTGTTAAGGCTATTGGG+AGG | - | chr6_2:81364402-81364421 | None:intergenic | 45.0% | |
| CTTGCAAAGGTGAAAAGCTC+AGG | + | chr6_2:81364570-81364589 | Msa0931700:intron | 45.0% | |
| AGAGGGGATTAGAAGAGATG+AGG | - | chr6_2:81364914-81364933 | None:intergenic | 45.0% | |
| GATGAGCTTAGTTCCACTAC+AGG | + | chr6_2:81364988-81365007 | Msa0931700:intron | 45.0% | |
| CCTTGAGGCTATTCCATTTG+TGG | - | chr6_2:81366083-81366102 | None:intergenic | 45.0% | |
| CCACAAATGGAATAGCCTCA+AGG | + | chr6_2:81366080-81366099 | Msa0931700:CDS | 45.0% | |
| ACCATATCCATCAACCCTTG+AGG | - | chr6_2:81366098-81366117 | None:intergenic | 45.0% | |
| ! | AACATGGTTTGTAACTGGCC+TGG | + | chr6_2:81366149-81366168 | Msa0931700:intron | 45.0% |
| ! | ACATGGTTTGTAACTGGCCT+GGG | + | chr6_2:81366150-81366169 | Msa0931700:intron | 45.0% |
| GAGGCTGCACAATATCTTAG+AGG | - | chr6_2:81366605-81366624 | None:intergenic | 45.0% | |
| TCACATGAATAGGGGATGGA+AGG | + | chr6_2:81366881-81366900 | Msa0931700:intron | 45.0% | |
| ACTGCTGCATCTTATGCAAG+AGG | + | chr6_2:81366926-81366945 | Msa0931700:intron | 45.0% | |
| ATCGTATACTGCAGGCAAGA+AGG | + | chr6_2:81367445-81367464 | Msa0931700:CDS | 45.0% | |
| CAGGCAAGAAGGTTTCTACA+GGG | + | chr6_2:81367456-81367475 | Msa0931700:CDS | 45.0% | |
| CTACAGGGTTATGGTTGTGA+CGG | + | chr6_2:81367471-81367490 | Msa0931700:CDS | 45.0% | |
| ! | TTTTGTAGTAACCTGCTGGC+AGG | + | chr6_2:81367518-81367537 | Msa0931700:CDS | 45.0% |
| !! | TATAAAACAATATATAAATT+AGG | - | chr6_2:81365172-81365191 | None:intergenic | 5.0% |
| GGGAGAAACAGAACGAGAGA+AGG | + | chr6_2:81363162-81363181 | Msa0931700:CDS | 50.0% | |
| GAAACAGAACGAGAGAAGGG+AGG | + | chr6_2:81363166-81363185 | Msa0931700:CDS | 50.0% | |
| GGAAACAGTGGGTAACCAAG+AGG | + | chr6_2:81363234-81363253 | Msa0931700:CDS | 50.0% | |
| GTGGGTAACCAAGAGGAAGA+AGG | + | chr6_2:81363241-81363260 | Msa0931700:CDS | 50.0% | |
| TTGGTACTGTTCTGTGCAGC+TGG | + | chr6_2:81364035-81364054 | Msa0931700:intron | 50.0% | |
| TGGTACTGTTCTGTGCAGCT+GGG | + | chr6_2:81364036-81364055 | Msa0931700:intron | 50.0% | |
| !! | CTGCTGCTTTAGTTCACTGG+CGG | + | chr6_2:81364227-81364246 | Msa0931700:intron | 50.0% |
| !! | ACACGCTCTAGAAAGGCCAT+AGG | - | chr6_2:81364330-81364349 | None:intergenic | 50.0% |
| ATGTGTCAACCTCTCTGCAC+AGG | + | chr6_2:81364490-81364509 | Msa0931700:intron | 50.0% | |
| TCTGCACAGGCCAAAGTTGA+AGG | + | chr6_2:81364503-81364522 | Msa0931700:intron | 50.0% | |
| ACAAGCACAACAGCAGAGGT+TGG | + | chr6_2:81365025-81365044 | Msa0931700:intron | 50.0% | |
| CAACAGCAGAGGTTGGACAA+AGG | + | chr6_2:81365032-81365051 | Msa0931700:intron | 50.0% | |
| TTGGCCTGATACGGCTGATA+CGG | + | chr6_2:81365224-81365243 | Msa0931700:intron | 50.0% | |
| GGATTTGGCCATAGATTCGG+AGG | + | chr6_2:81365749-81365768 | Msa0931700:intron | 50.0% | |
| GATGCTTCCCTACTTCAGCA+TGG | + | chr6_2:81365945-81365964 | Msa0931700:intron | 50.0% | |
| GGAATAGCCTCAAGGGTTGA+TGG | + | chr6_2:81366088-81366107 | Msa0931700:CDS | 50.0% | |
| !! | GCCTCAAGGGTTGATGGATA+TGG | + | chr6_2:81366094-81366113 | Msa0931700:CDS | 50.0% |
| !! | GCAAGAGGTACTAGCAGCAA+TGG | + | chr6_2:81366941-81366960 | Msa0931700:intron | 50.0% |
| GGGGACATTACCAAATCCAC+AGG | - | chr6_2:81367415-81367434 | None:intergenic | 50.0% | |
| GCAGGCAAGAAGGTTTCTAC+AGG | + | chr6_2:81367455-81367474 | Msa0931700:CDS | 50.0% | |
| CAACAACAGTGTGGAGAGCT+AGG | + | chr6_2:81367556-81367575 | Msa0931700:CDS | 50.0% | |
| ! | AGGGAAAGTGACGGGGAGAA+AGG | + | chr6_2:81363128-81363147 | Msa0931700:CDS | 55.0% |
| ! | GGGAAAGTGACGGGGAGAAA+GGG | + | chr6_2:81363129-81363148 | Msa0931700:CDS | 55.0% |
| CGGGGAGAAAGGGAAAGTGA+CGG | + | chr6_2:81363139-81363158 | Msa0931700:CDS | 55.0% | |
| GGGGAGAAAGGGAAAGTGAC+GGG | + | chr6_2:81363140-81363159 | Msa0931700:CDS | 55.0% | |
| GGGAGAAAGGGAAAGTGACG+GGG | + | chr6_2:81363141-81363160 | Msa0931700:CDS | 55.0% | |
| GGAGAAAGGGAAAGTGACGG+GGG | + | chr6_2:81363142-81363161 | Msa0931700:CDS | 55.0% | |
| AAGGGAGGGAGAGGAGAAGA+AGG | + | chr6_2:81363181-81363200 | Msa0931700:CDS | 55.0% | |
| ! | TGTGCAGCTGGGTATTGTGC+TGG | + | chr6_2:81364047-81364066 | Msa0931700:intron | 55.0% |
| ! | GTGCAGCTGGGTATTGTGCT+GGG | + | chr6_2:81364048-81364067 | Msa0931700:intron | 55.0% |
| ! | GCTGGGTATTGTGCTGGGAA+AGG | + | chr6_2:81364053-81364072 | Msa0931700:intron | 55.0% |
| GTGCTGGGAAAGGCTAAGAG+TGG | + | chr6_2:81364063-81364082 | Msa0931700:CDS | 55.0% | |
| !! | GGCCTTTCTAGAGCGTGTCA+AGG | + | chr6_2:81364332-81364351 | Msa0931700:CDS | 55.0% |
| CAACTTTGGCCTGTGCAGAG+AGG | - | chr6_2:81364502-81364521 | None:intergenic | 55.0% | |
| GAGCACAAGCACAACAGCAG+AGG | + | chr6_2:81365021-81365040 | Msa0931700:intron | 55.0% | |
| CAGTCCGTATCAGCCGTATC+AGG | - | chr6_2:81365231-81365250 | None:intergenic | 55.0% | |
| CTGATACGGCTGATACGGAC+TGG | + | chr6_2:81365229-81365248 | Msa0931700:intron | 55.0% | |
| TAGTAACCTGCTGGCAGGAC+AGG | + | chr6_2:81367523-81367542 | Msa0931700:CDS | 55.0% | |
| GAACGAGAGAAGGGAGGGAG+AGG | + | chr6_2:81363172-81363191 | Msa0931700:CDS | 60.0% | |
| CAAAGACCTGTCCTGCCAGC+AGG | - | chr6_2:81367532-81367551 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 81363048 | 81367584 | 81363048 | ID=Msa0931700;Name=Msa0931700 |
| chr6_2 | mRNA | 81363048 | 81367584 | 81363048 | ID=Msa0931700-mRNA-1;Parent=Msa0931700;Name=Msa0931700-mRNA-1;_AED=0.41;_eAED=0.42;_QI=0|0|0|0.5|0.85|0.75|8|0|259 |
| chr6_2 | exon | 81363048 | 81363055 | 81363048 | ID=Msa0931700-mRNA-1:exon:14368;Parent=Msa0931700-mRNA-1 |
| chr6_2 | exon | 81363124 | 81363286 | 81363124 | ID=Msa0931700-mRNA-1:exon:14369;Parent=Msa0931700-mRNA-1 |
| chr6_2 | exon | 81363729 | 81363794 | 81363729 | ID=Msa0931700-mRNA-1:exon:14370;Parent=Msa0931700-mRNA-1 |
| chr6_2 | exon | 81364054 | 81364093 | 81364054 | ID=Msa0931700-mRNA-1:exon:14371;Parent=Msa0931700-mRNA-1 |
| chr6_2 | exon | 81364286 | 81364427 | 81364286 | ID=Msa0931700-mRNA-1:exon:14372;Parent=Msa0931700-mRNA-1 |
| chr6_2 | exon | 81364512 | 81364578 | 81364512 | ID=Msa0931700-mRNA-1:exon:14373;Parent=Msa0931700-mRNA-1 |
| chr6_2 | exon | 81366076 | 81366158 | 81366076 | ID=Msa0931700-mRNA-1:exon:14374;Parent=Msa0931700-mRNA-1 |
| chr6_2 | exon | 81367374 | 81367584 | 81367374 | ID=Msa0931700-mRNA-1:exon:14375;Parent=Msa0931700-mRNA-1 |
| chr6_2 | CDS | 81363048 | 81363055 | 81363048 | ID=Msa0931700-mRNA-1:cds;Parent=Msa0931700-mRNA-1 |
| chr6_2 | CDS | 81363124 | 81363286 | 81363124 | ID=Msa0931700-mRNA-1:cds;Parent=Msa0931700-mRNA-1 |
| chr6_2 | CDS | 81363729 | 81363794 | 81363729 | ID=Msa0931700-mRNA-1:cds;Parent=Msa0931700-mRNA-1 |
| chr6_2 | CDS | 81364054 | 81364093 | 81364054 | ID=Msa0931700-mRNA-1:cds;Parent=Msa0931700-mRNA-1 |
| chr6_2 | CDS | 81364286 | 81364427 | 81364286 | ID=Msa0931700-mRNA-1:cds;Parent=Msa0931700-mRNA-1 |
| chr6_2 | CDS | 81364512 | 81364578 | 81364512 | ID=Msa0931700-mRNA-1:cds;Parent=Msa0931700-mRNA-1 |
| chr6_2 | CDS | 81366076 | 81366158 | 81366076 | ID=Msa0931700-mRNA-1:cds;Parent=Msa0931700-mRNA-1 |
| chr6_2 | CDS | 81367374 | 81367584 | 81367374 | ID=Msa0931700-mRNA-1:cds;Parent=Msa0931700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
