Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339120 | XP_013465364.1 | 96.885 | 321 | 3 | 4 | 1 | 315 | 1 | 320 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339120 | sp|Q9FKL2|MYB36_ARATH | 88.136 | 118 | 14 | 0 | 1 | 118 | 1 | 118 | 2.22e-75 | 237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0339120 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0222370 | Msa0339120 | 0.817238 | 3.657280e-52 | -8.615850e-47 |
| Msa0241750 | Msa0339120 | 0.807911 | 4.010668e-50 | -8.615850e-47 |
| Msa0263880 | Msa0339120 | 0.925465 | 1.769090e-90 | -8.615850e-47 |
| Msa0301710 | Msa0339120 | 0.990936 | 4.595730e-185 | -8.615850e-47 |
| Msa0339120 | Msa0931680 | 0.802571 | 5.266345e-49 | -8.615850e-47 |
| Msa0339120 | Msa1433360 | 0.813013 | 3.173726e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339120 | MtrunA17_Chr2g0327351 | 96.885 | 321 | 3 | 4 | 1 | 315 | 1 | 320 | 0.0 | 629 |
| Msa0339120 | MtrunA17_Chr4g0028311 | 52.367 | 338 | 122 | 11 | 1 | 315 | 1 | 322 | 6.95e-95 | 284 |
| Msa0339120 | MtrunA17_Chr1g0152011 | 87.288 | 118 | 15 | 0 | 1 | 118 | 1 | 118 | 1.94e-76 | 237 |
| Msa0339120 | MtrunA17_Chr5g0400821 | 87.288 | 118 | 15 | 0 | 1 | 118 | 1 | 118 | 1.52e-75 | 234 |
| Msa0339120 | MtrunA17_Chr3g0135311 | 85.593 | 118 | 17 | 0 | 1 | 118 | 1 | 118 | 2.42e-74 | 232 |
| Msa0339120 | MtrunA17_Chr4g0054391 | 86.364 | 110 | 15 | 0 | 1 | 110 | 1 | 110 | 7.89e-71 | 221 |
| Msa0339120 | MtrunA17_Chr4g0072751 | 86.486 | 111 | 15 | 0 | 1 | 111 | 1 | 111 | 1.87e-69 | 219 |
| Msa0339120 | MtrunA17_Chr1g0151941 | 57.459 | 181 | 53 | 3 | 1 | 177 | 1 | 161 | 7.68e-68 | 212 |
| Msa0339120 | MtrunA17_Chr6g0487491 | 72.222 | 126 | 27 | 1 | 1 | 118 | 1 | 126 | 3.67e-62 | 198 |
| Msa0339120 | MtrunA17_Chr6g0452271 | 63.077 | 130 | 45 | 2 | 1 | 128 | 1 | 129 | 2.75e-56 | 185 |
| Msa0339120 | MtrunA17_Chr3g0103281 | 65.354 | 127 | 41 | 2 | 1 | 125 | 1 | 126 | 7.92e-56 | 184 |
| Msa0339120 | MtrunA17_Chr5g0410961 | 63.780 | 127 | 43 | 2 | 1 | 125 | 1 | 126 | 2.61e-55 | 183 |
| Msa0339120 | MtrunA17_Chr4g0039971 | 61.194 | 134 | 49 | 2 | 1 | 132 | 2 | 134 | 3.93e-55 | 182 |
| Msa0339120 | MtrunA17_Chr1g0203411 | 61.538 | 130 | 49 | 1 | 1 | 130 | 1 | 129 | 3.98e-55 | 181 |
| Msa0339120 | MtrunA17_Chr3g0115821 | 57.746 | 142 | 51 | 3 | 1 | 134 | 1 | 141 | 1.53e-54 | 181 |
| Msa0339120 | MtrunA17_Chr6g0453471 | 39.161 | 286 | 154 | 9 | 1 | 271 | 1 | 281 | 6.33e-54 | 180 |
| Msa0339120 | MtrunA17_Chr7g0217741 | 61.765 | 136 | 45 | 3 | 1 | 130 | 1 | 135 | 2.89e-53 | 176 |
| Msa0339120 | MtrunA17_Chr8g0349261 | 53.416 | 161 | 65 | 4 | 1 | 158 | 1 | 154 | 1.50e-52 | 174 |
| Msa0339120 | MtrunA17_Chr4g0048511 | 60.000 | 135 | 50 | 3 | 1 | 132 | 1 | 134 | 4.10e-52 | 175 |
| Msa0339120 | MtrunA17_Chr4g0042671 | 56.051 | 157 | 65 | 3 | 1 | 155 | 1 | 155 | 6.13e-52 | 176 |
| Msa0339120 | MtrunA17_Chr4g0037141 | 47.337 | 169 | 85 | 3 | 1 | 167 | 1 | 167 | 1.23e-51 | 172 |
| Msa0339120 | MtrunA17_Chr2g0281071 | 61.719 | 128 | 45 | 3 | 1 | 125 | 1 | 127 | 1.61e-51 | 173 |
| Msa0339120 | MtrunA17_Chr2g0323411 | 58.955 | 134 | 52 | 2 | 1 | 132 | 1 | 133 | 1.91e-51 | 172 |
| Msa0339120 | MtrunA17_Chr5g0395281 | 45.192 | 208 | 99 | 5 | 1 | 197 | 1 | 204 | 9.37e-51 | 170 |
| Msa0339120 | MtrunA17_Chr7g0275911 | 61.345 | 119 | 45 | 1 | 1 | 119 | 1 | 118 | 1.94e-50 | 167 |
| Msa0339120 | MtrunA17_Chr1g0187761 | 64.957 | 117 | 40 | 1 | 1 | 117 | 1 | 116 | 2.14e-50 | 167 |
| Msa0339120 | MtrunA17_Chr1g0167661 | 63.025 | 119 | 43 | 1 | 1 | 119 | 1 | 118 | 5.77e-50 | 166 |
| Msa0339120 | MtrunA17_Chr8g0346561 | 62.393 | 117 | 43 | 1 | 1 | 117 | 1 | 116 | 6.85e-50 | 167 |
| Msa0339120 | MtrunA17_Chr3g0131121 | 55.474 | 137 | 58 | 2 | 1 | 135 | 1 | 136 | 8.35e-50 | 167 |
| Msa0339120 | MtrunA17_Chr7g0217221 | 64.103 | 117 | 41 | 1 | 1 | 117 | 1 | 116 | 8.62e-50 | 166 |
| Msa0339120 | MtrunA17_Chr5g0435101 | 52.414 | 145 | 64 | 3 | 3 | 143 | 2 | 145 | 1.12e-49 | 164 |
| Msa0339120 | MtrunA17_Chr4g0060721 | 62.393 | 117 | 43 | 1 | 1 | 117 | 2 | 117 | 1.18e-49 | 168 |
| Msa0339120 | MtrunA17_Chr4g0070611 | 56.923 | 130 | 55 | 1 | 1 | 130 | 1 | 129 | 2.61e-49 | 166 |
| Msa0339120 | MtrunA17_Chr1g0167691 | 61.017 | 118 | 45 | 1 | 1 | 118 | 1 | 117 | 3.92e-49 | 164 |
| Msa0339120 | MtrunA17_Chr4g0070641 | 56.923 | 130 | 55 | 1 | 1 | 130 | 1 | 129 | 7.61e-49 | 160 |
| Msa0339120 | MtrunA17_Chr3g0092401 | 61.667 | 120 | 45 | 1 | 1 | 120 | 2 | 120 | 2.34e-48 | 164 |
| Msa0339120 | MtrunA17_Chr1g0193371 | 64.103 | 117 | 41 | 1 | 1 | 117 | 1 | 116 | 4.68e-48 | 165 |
| Msa0339120 | MtrunA17_Chr8g0385321 | 61.538 | 117 | 44 | 1 | 1 | 117 | 1 | 116 | 7.60e-48 | 162 |
| Msa0339120 | MtrunA17_Chr4g0068061 | 59.829 | 117 | 46 | 1 | 1 | 117 | 1 | 116 | 1.29e-47 | 163 |
| Msa0339120 | MtrunA17_Chr3g0121241 | 56.911 | 123 | 50 | 2 | 5 | 125 | 35 | 156 | 2.93e-47 | 161 |
| Msa0339120 | MtrunA17_Chr1g0193801 | 63.248 | 117 | 42 | 1 | 1 | 117 | 1 | 116 | 3.18e-47 | 163 |
| Msa0339120 | MtrunA17_Chr7g0254411 | 51.634 | 153 | 66 | 3 | 1 | 153 | 1 | 145 | 3.50e-47 | 162 |
| Msa0339120 | MtrunA17_Chr6g0453211 | 63.964 | 111 | 39 | 1 | 1 | 111 | 1 | 110 | 3.72e-47 | 161 |
| Msa0339120 | MtrunA17_Chr7g0261281 | 60.684 | 117 | 45 | 1 | 1 | 117 | 1 | 116 | 4.58e-47 | 159 |
| Msa0339120 | MtrunA17_Chr4g0058631 | 57.480 | 127 | 51 | 2 | 1 | 125 | 1 | 126 | 6.36e-47 | 161 |
| Msa0339120 | MtrunA17_Chr7g0274581 | 58.120 | 117 | 48 | 1 | 1 | 117 | 1 | 116 | 6.74e-47 | 157 |
| Msa0339120 | MtrunA17_Chr4g0057031 | 57.480 | 127 | 51 | 2 | 1 | 125 | 1 | 126 | 1.18e-46 | 158 |
| Msa0339120 | MtrunA17_Chr7g0270891 | 63.248 | 117 | 42 | 1 | 1 | 117 | 1 | 116 | 1.35e-46 | 161 |
| Msa0339120 | MtrunA17_Chr4g0022931 | 59.322 | 118 | 46 | 2 | 1 | 117 | 1 | 117 | 2.47e-46 | 157 |
| Msa0339120 | MtrunA17_Chr8g0387421 | 58.120 | 117 | 48 | 1 | 1 | 117 | 1 | 116 | 2.79e-46 | 159 |
| Msa0339120 | MtrunA17_Chr3g0117091 | 56.489 | 131 | 54 | 2 | 1 | 129 | 1 | 130 | 3.87e-46 | 159 |
| Msa0339120 | MtrunA17_Chr2g0323351 | 59.322 | 118 | 47 | 1 | 1 | 118 | 1 | 117 | 6.60e-46 | 155 |
| Msa0339120 | MtrunA17_Chr4g0022891 | 61.404 | 114 | 43 | 1 | 1 | 114 | 1 | 113 | 9.51e-46 | 155 |
| Msa0339120 | MtrunA17_Chr7g0228891 | 55.385 | 130 | 55 | 2 | 1 | 128 | 1 | 129 | 1.10e-45 | 155 |
| Msa0339120 | MtrunA17_Chr2g0309911 | 34.810 | 316 | 160 | 10 | 6 | 286 | 5 | 309 | 1.27e-45 | 157 |
| Msa0339120 | MtrunA17_Chr3g0110351 | 55.385 | 130 | 55 | 2 | 1 | 128 | 1 | 129 | 1.50e-45 | 157 |
| Msa0339120 | MtrunA17_Chr4g0022901 | 49.673 | 153 | 71 | 4 | 1 | 151 | 1 | 149 | 2.16e-45 | 155 |
| Msa0339120 | MtrunA17_Chr5g0434571 | 55.385 | 130 | 55 | 2 | 1 | 128 | 37 | 165 | 2.18e-45 | 157 |
| Msa0339120 | MtrunA17_Chr2g0311221 | 60.909 | 110 | 42 | 1 | 2 | 111 | 4 | 112 | 3.13e-45 | 156 |
| Msa0339120 | MtrunA17_Chr5g0397231 | 59.459 | 111 | 44 | 1 | 1 | 111 | 1 | 110 | 5.17e-45 | 156 |
| Msa0339120 | MtrunA17_Chr1g0211161 | 55.039 | 129 | 55 | 2 | 3 | 129 | 4 | 131 | 9.04e-45 | 152 |
| Msa0339120 | MtrunA17_Chr2g0330041 | 39.815 | 216 | 112 | 6 | 1 | 204 | 1 | 210 | 1.23e-44 | 156 |
| Msa0339120 | MtrunA17_Chr7g0271241 | 64.545 | 110 | 38 | 1 | 1 | 110 | 1 | 109 | 1.48e-44 | 156 |
| Msa0339120 | MtrunA17_Chr8g0342541 | 49.669 | 151 | 69 | 3 | 1 | 150 | 1 | 145 | 2.22e-44 | 154 |
| Msa0339120 | MtrunA17_Chr8g0342481 | 55.932 | 118 | 52 | 0 | 1 | 118 | 1 | 118 | 1.88e-43 | 153 |
| Msa0339120 | MtrunA17_Chr8g0342521 | 56.780 | 118 | 50 | 1 | 1 | 118 | 1 | 117 | 2.26e-43 | 152 |
| Msa0339120 | MtrunA17_Chr4g0022911 | 54.167 | 120 | 53 | 2 | 1 | 119 | 1 | 119 | 3.32e-43 | 150 |
| Msa0339120 | MtrunA17_Chr4g0022881 | 40.670 | 209 | 107 | 6 | 1 | 194 | 1 | 207 | 4.61e-42 | 145 |
| Msa0339120 | MtrunA17_Chr5g0417821 | 58.621 | 116 | 45 | 2 | 12 | 125 | 7 | 121 | 6.93e-42 | 146 |
| Msa0339120 | MtrunA17_Chr4g0044421 | 51.852 | 135 | 59 | 4 | 3 | 132 | 2 | 135 | 7.63e-42 | 143 |
| Msa0339120 | MtrunA17_Chr1g0194951 | 55.556 | 117 | 51 | 1 | 1 | 117 | 1 | 116 | 1.72e-41 | 147 |
| Msa0339120 | MtrunA17_Chr3g0099131 | 57.522 | 113 | 47 | 1 | 10 | 122 | 39 | 150 | 3.25e-41 | 150 |
| Msa0339120 | MtrunA17_Chr1g0203441 | 58.475 | 118 | 47 | 2 | 1 | 117 | 1 | 117 | 5.70e-41 | 144 |
| Msa0339120 | MtrunA17_Chr7g0269831 | 58.974 | 117 | 47 | 1 | 1 | 117 | 1 | 116 | 1.17e-40 | 145 |
| Msa0339120 | MtrunA17_Chr2g0328771 | 56.881 | 109 | 46 | 1 | 12 | 120 | 20 | 127 | 4.37e-40 | 142 |
| Msa0339120 | MtrunA17_Chr6g0470971 | 53.333 | 135 | 62 | 1 | 4 | 138 | 6 | 139 | 5.11e-40 | 141 |
| Msa0339120 | MtrunA17_Chr4g0032401 | 56.881 | 109 | 46 | 1 | 12 | 120 | 17 | 124 | 7.06e-39 | 140 |
| Msa0339120 | MtrunA17_Chr8g0354661 | 54.955 | 111 | 49 | 1 | 12 | 122 | 37 | 146 | 9.82e-39 | 143 |
| Msa0339120 | MtrunA17_Chr3g0088461 | 56.364 | 110 | 47 | 1 | 8 | 117 | 18 | 126 | 1.11e-38 | 139 |
| Msa0339120 | MtrunA17_Chr3g0080861 | 54.054 | 111 | 50 | 1 | 12 | 122 | 37 | 146 | 1.30e-38 | 142 |
| Msa0339120 | MtrunA17_Chr4g0055981 | 57.407 | 108 | 45 | 1 | 9 | 116 | 52 | 158 | 4.28e-38 | 135 |
| Msa0339120 | MtrunA17_Chr8g0343831 | 56.410 | 117 | 46 | 2 | 1 | 117 | 1 | 112 | 6.14e-38 | 135 |
| Msa0339120 | MtrunA17_Chr2g0322521 | 56.140 | 114 | 49 | 1 | 9 | 122 | 26 | 138 | 9.44e-38 | 138 |
| Msa0339120 | MtrunA17_Chr1g0186061 | 59.615 | 104 | 41 | 1 | 13 | 116 | 21 | 123 | 9.70e-38 | 135 |
| Msa0339120 | MtrunA17_Chr7g0228231 | 57.009 | 107 | 45 | 1 | 11 | 117 | 13 | 118 | 1.40e-37 | 133 |
| Msa0339120 | MtrunA17_Chr6g0450101 | 52.941 | 119 | 53 | 2 | 1 | 117 | 1 | 118 | 1.41e-37 | 133 |
| Msa0339120 | MtrunA17_Chr1g0194301 | 53.982 | 113 | 51 | 1 | 8 | 120 | 29 | 140 | 2.70e-37 | 134 |
| Msa0339120 | MtrunA17_Chr5g0434931 | 57.009 | 107 | 45 | 1 | 12 | 118 | 35 | 140 | 6.09e-37 | 133 |
| Msa0339120 | MtrunA17_Chr1g0180391 | 56.481 | 108 | 46 | 1 | 10 | 117 | 17 | 123 | 1.04e-36 | 131 |
| Msa0339120 | MtrunA17_Chr5g0434911 | 54.464 | 112 | 50 | 1 | 7 | 118 | 16 | 126 | 2.16e-36 | 132 |
| Msa0339120 | MtrunA17_Chr1g0168661 | 56.075 | 107 | 46 | 1 | 13 | 119 | 22 | 127 | 2.37e-36 | 131 |
| Msa0339120 | MtrunA17_Chr1g0194291 | 53.982 | 113 | 51 | 1 | 8 | 120 | 17 | 128 | 3.09e-36 | 131 |
| Msa0339120 | MtrunA17_Chr7g0240821 | 58.824 | 102 | 41 | 1 | 16 | 117 | 5 | 105 | 4.20e-36 | 129 |
| Msa0339120 | MtrunA17_Chr1g0209661 | 53.211 | 109 | 50 | 1 | 12 | 120 | 27 | 134 | 4.43e-36 | 132 |
| Msa0339120 | MtrunA17_Chr1g0192411 | 48.387 | 124 | 63 | 1 | 8 | 131 | 8 | 130 | 1.29e-35 | 132 |
| Msa0339120 | MtrunA17_Chr4g0042611 | 60.674 | 89 | 34 | 1 | 1 | 89 | 1 | 88 | 3.70e-35 | 122 |
| Msa0339120 | MtrunA17_Chr7g0220341 | 56.881 | 109 | 44 | 2 | 12 | 118 | 25 | 132 | 8.57e-35 | 127 |
| Msa0339120 | MtrunA17_Chr7g0228991 | 56.075 | 107 | 46 | 1 | 12 | 118 | 29 | 134 | 9.42e-35 | 127 |
| Msa0339120 | MtrunA17_Chr5g0440781 | 54.464 | 112 | 48 | 3 | 10 | 120 | 10 | 119 | 1.22e-34 | 124 |
| Msa0339120 | MtrunA17_Chr5g0434831 | 54.206 | 107 | 48 | 1 | 12 | 118 | 7 | 112 | 1.98e-34 | 124 |
| Msa0339120 | MtrunA17_Chr1g0154031 | 48.413 | 126 | 59 | 2 | 12 | 137 | 76 | 195 | 5.72e-34 | 128 |
| Msa0339120 | MtrunA17_Chr5g0440761 | 54.464 | 112 | 48 | 3 | 10 | 120 | 10 | 119 | 6.99e-34 | 125 |
| Msa0339120 | MtrunA17_Chr5g0441141 | 54.464 | 112 | 48 | 3 | 10 | 120 | 10 | 119 | 7.44e-34 | 125 |
| Msa0339120 | MtrunA17_Chr8g0360111 | 55.882 | 102 | 44 | 1 | 12 | 113 | 25 | 125 | 3.24e-33 | 123 |
| Msa0339120 | MtrunA17_Chr5g0434841 | 52.336 | 107 | 50 | 1 | 12 | 118 | 20 | 125 | 1.39e-32 | 122 |
| Msa0339120 | MtrunA17_Chr2g0327821 | 40.268 | 149 | 82 | 2 | 12 | 154 | 6 | 153 | 2.55e-32 | 120 |
| Msa0339120 | MtrunA17_Chr5g0441131 | 41.916 | 167 | 90 | 5 | 10 | 174 | 7 | 168 | 2.91e-32 | 118 |
| Msa0339120 | MtrunA17_Chr7g0247131 | 54.455 | 101 | 38 | 2 | 45 | 143 | 10 | 104 | 3.09e-32 | 120 |
| Msa0339120 | MtrunA17_Chr4g0068921 | 52.778 | 108 | 50 | 1 | 8 | 115 | 20 | 126 | 3.44e-32 | 118 |
| Msa0339120 | MtrunA17_Chr8g0334881 | 49.565 | 115 | 55 | 3 | 8 | 121 | 6 | 118 | 5.75e-32 | 121 |
| Msa0339120 | MtrunA17_Chr2g0293911 | 51.327 | 113 | 54 | 1 | 8 | 120 | 20 | 131 | 7.28e-32 | 121 |
| Msa0339120 | MtrunA17_Chr2g0294811 | 55.914 | 93 | 40 | 1 | 1 | 93 | 1 | 92 | 2.98e-31 | 113 |
| Msa0339120 | MtrunA17_Chr3g0099141 | 56.818 | 88 | 37 | 1 | 8 | 95 | 36 | 122 | 1.17e-30 | 112 |
| Msa0339120 | MtrunA17_Chr5g0401731 | 50.926 | 108 | 51 | 2 | 14 | 121 | 15 | 120 | 4.36e-30 | 116 |
| Msa0339120 | MtrunA17_Chr4g0013361 | 48.624 | 109 | 54 | 2 | 8 | 115 | 6 | 113 | 5.65e-30 | 115 |
| Msa0339120 | MtrunA17_Chr4g0053431 | 41.667 | 144 | 82 | 2 | 14 | 157 | 5 | 146 | 1.36e-29 | 114 |
| Msa0339120 | MtrunA17_Chr5g0395221 | 56.180 | 89 | 38 | 1 | 1 | 89 | 1 | 88 | 2.07e-29 | 107 |
| Msa0339120 | MtrunA17_Chr8g0342461 | 54.444 | 90 | 41 | 0 | 1 | 90 | 1 | 90 | 2.23e-29 | 109 |
| Msa0339120 | MtrunA17_Chr8g0342471 | 54.444 | 90 | 41 | 0 | 1 | 90 | 1 | 90 | 5.83e-29 | 108 |
| Msa0339120 | MtrunA17_Chr4g0008551 | 52.427 | 103 | 47 | 2 | 14 | 116 | 38 | 138 | 6.89e-29 | 113 |
| Msa0339120 | MtrunA17_Chr8g0342511 | 56.322 | 87 | 37 | 1 | 1 | 87 | 1 | 86 | 7.60e-29 | 106 |
| Msa0339120 | MtrunA17_Chr6g0454921 | 49.074 | 108 | 53 | 2 | 14 | 121 | 15 | 120 | 7.82e-29 | 110 |
| Msa0339120 | MtrunA17_Chr4g0030881 | 45.946 | 111 | 52 | 2 | 13 | 116 | 8 | 117 | 8.94e-29 | 111 |
| Msa0339120 | MtrunA17_Chr8g0342531 | 54.444 | 90 | 40 | 1 | 1 | 90 | 1 | 89 | 4.38e-28 | 107 |
| Msa0339120 | MtrunA17_Chr3g0133601 | 49.541 | 109 | 53 | 2 | 8 | 116 | 31 | 137 | 8.11e-28 | 107 |
| Msa0339120 | MtrunA17_Chr2g0323321 | 49.462 | 93 | 45 | 2 | 1 | 93 | 1 | 91 | 1.27e-26 | 101 |
| Msa0339120 | MtrunA17_Chr6g0480581 | 35.119 | 168 | 94 | 7 | 14 | 173 | 4 | 164 | 1.37e-25 | 102 |
| Msa0339120 | MtrunA17_Chr5g0429661 | 37.870 | 169 | 94 | 6 | 14 | 179 | 122 | 282 | 3.49e-25 | 103 |
| Msa0339120 | MtrunA17_Chr3g0093811 | 53.763 | 93 | 38 | 2 | 38 | 125 | 4 | 96 | 5.75e-25 | 101 |
| Msa0339120 | MtrunA17_Chr5g0434901 | 61.765 | 68 | 26 | 0 | 47 | 114 | 7 | 74 | 7.36e-24 | 94.4 |
| Msa0339120 | MtrunA17_Chr5g0425591 | 50.000 | 88 | 42 | 2 | 10 | 96 | 7 | 93 | 1.94e-23 | 92.4 |
| Msa0339120 | MtrunA17_Chr4g0058991 | 42.593 | 108 | 60 | 2 | 9 | 116 | 204 | 309 | 1.37e-22 | 97.4 |
| Msa0339120 | MtrunA17_Chr7g0229131 | 54.795 | 73 | 33 | 0 | 46 | 118 | 5 | 77 | 1.86e-22 | 92.0 |
| Msa0339120 | MtrunA17_Chr7g0229101 | 58.571 | 70 | 29 | 0 | 45 | 114 | 4 | 73 | 2.00e-22 | 93.2 |
| Msa0339120 | MtrunA17_Chr4g0042501 | 43.689 | 103 | 56 | 2 | 14 | 116 | 105 | 205 | 8.73e-22 | 95.1 |
| Msa0339120 | MtrunA17_Chr7g0238631 | 48.077 | 104 | 52 | 2 | 14 | 117 | 113 | 214 | 9.13e-22 | 95.5 |
| Msa0339120 | MtrunA17_Chr6g0453751 | 47.872 | 94 | 39 | 3 | 12 | 96 | 20 | 112 | 1.37e-21 | 88.6 |
| Msa0339120 | MtrunA17_Chr6g0460661 | 40.741 | 108 | 62 | 2 | 14 | 121 | 16 | 121 | 2.62e-21 | 89.0 |
| Msa0339120 | MtrunA17_Chr5g0417621 | 32.778 | 180 | 107 | 4 | 14 | 193 | 134 | 299 | 6.00e-21 | 92.8 |
| Msa0339120 | MtrunA17_Chr3g0117511 | 41.667 | 108 | 61 | 2 | 9 | 116 | 178 | 283 | 6.14e-21 | 92.8 |
| Msa0339120 | MtrunA17_Chr5g0437321 | 46.000 | 100 | 52 | 2 | 14 | 113 | 19 | 116 | 5.31e-20 | 88.2 |
| Msa0339120 | MtrunA17_Chr3g0125801 | 40.367 | 109 | 63 | 2 | 8 | 116 | 10 | 116 | 6.47e-20 | 87.8 |
| Msa0339120 | MtrunA17_Chr3g0139671 | 40.496 | 121 | 65 | 3 | 14 | 129 | 85 | 203 | 1.92e-19 | 89.0 |
| Msa0339120 | MtrunA17_Chr3g0139671 | 35.644 | 101 | 62 | 3 | 14 | 113 | 33 | 131 | 6.74e-11 | 63.2 |
| Msa0339120 | MtrunA17_Chr1g0157731 | 41.667 | 108 | 61 | 2 | 14 | 121 | 91 | 196 | 7.97e-19 | 87.4 |
| Msa0339120 | MtrunA17_Chr7g0254261 | 42.718 | 103 | 57 | 2 | 14 | 116 | 89 | 189 | 1.30e-18 | 85.1 |
| Msa0339120 | MtrunA17_Chr6g0460671 | 39.815 | 108 | 63 | 2 | 14 | 121 | 99 | 204 | 1.30e-18 | 85.1 |
| Msa0339120 | MtrunA17_Chr5g0397841 | 46.000 | 100 | 52 | 2 | 11 | 110 | 107 | 204 | 1.96e-18 | 85.5 |
| Msa0339120 | MtrunA17_Chr7g0238651 | 40.625 | 96 | 56 | 1 | 17 | 111 | 10 | 105 | 1.11e-17 | 82.4 |
| Msa0339120 | MtrunA17_Chr7g0228401 | 43.678 | 87 | 47 | 2 | 25 | 111 | 290 | 374 | 1.24e-17 | 83.2 |
| Msa0339120 | MtrunA17_Chr7g0228531 | 38.679 | 106 | 62 | 3 | 11 | 116 | 217 | 319 | 2.43e-17 | 82.0 |
| Msa0339120 | MtrunA17_Chr1g0177901 | 33.333 | 141 | 89 | 2 | 34 | 169 | 12 | 152 | 5.67e-17 | 78.2 |
| Msa0339120 | MtrunA17_Chr8g0362231 | 39.806 | 103 | 60 | 2 | 17 | 119 | 25 | 125 | 2.60e-15 | 76.3 |
| Msa0339120 | MtrunA17_Chr5g0416341 | 40.000 | 100 | 58 | 2 | 17 | 116 | 29 | 126 | 4.84e-15 | 75.5 |
| Msa0339120 | MtrunA17_Chr7g0233061 | 35.135 | 111 | 65 | 3 | 10 | 117 | 176 | 282 | 6.92e-15 | 74.3 |
| Msa0339120 | MtrunA17_Chr7g0228481 | 27.315 | 216 | 130 | 8 | 11 | 206 | 217 | 425 | 9.34e-15 | 74.3 |
| Msa0339120 | MtrunA17_Chr1g0193901 | 55.932 | 59 | 24 | 2 | 12 | 69 | 11 | 68 | 2.74e-14 | 68.2 |
| Msa0339120 | MtrunA17_Chr1g0193891 | 55.932 | 59 | 24 | 2 | 12 | 69 | 11 | 68 | 2.74e-14 | 68.2 |
| Msa0339120 | MtrunA17_Chr1g0193871 | 55.932 | 59 | 24 | 2 | 12 | 69 | 11 | 68 | 2.74e-14 | 68.2 |
| Msa0339120 | MtrunA17_Chr1g0193881 | 55.932 | 59 | 24 | 2 | 12 | 69 | 11 | 68 | 2.74e-14 | 68.2 |
| Msa0339120 | MtrunA17_Chr7g0247141 | 57.447 | 47 | 20 | 0 | 1 | 47 | 1 | 47 | 3.40e-13 | 63.5 |
| Msa0339120 | MtrunA17_Chr5g0434871 | 53.333 | 45 | 21 | 0 | 75 | 119 | 2 | 46 | 1.50e-11 | 59.3 |
| Msa0339120 | MtrunA17_Chr4g0024181 | 48.837 | 43 | 22 | 0 | 70 | 112 | 27 | 69 | 7.69e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339120 | AT5G57620.1 | 88.136 | 118 | 14 | 0 | 1 | 118 | 1 | 118 | 2.25e-76 | 237 |
| Msa0339120 | AT5G65790.1 | 88.235 | 119 | 14 | 0 | 1 | 119 | 1 | 119 | 3.64e-76 | 238 |
| Msa0339120 | AT3G49690.1 | 86.555 | 119 | 16 | 0 | 1 | 119 | 1 | 119 | 3.48e-75 | 233 |
| Msa0339120 | AT5G23000.1 | 83.898 | 118 | 19 | 0 | 1 | 118 | 1 | 118 | 1.33e-72 | 227 |
| Msa0339120 | AT4G37780.1 | 82.203 | 118 | 21 | 0 | 1 | 118 | 1 | 118 | 2.09e-71 | 223 |
| Msa0339120 | AT5G56110.1 | 65.354 | 127 | 41 | 2 | 1 | 125 | 1 | 126 | 1.53e-56 | 186 |
| Msa0339120 | AT3G01140.2 | 52.198 | 182 | 82 | 3 | 1 | 178 | 1 | 181 | 2.51e-56 | 186 |
| Msa0339120 | AT5G15310.4 | 64.567 | 127 | 42 | 2 | 1 | 125 | 1 | 126 | 1.32e-54 | 178 |
| Msa0339120 | AT5G15310.2 | 47.005 | 217 | 99 | 6 | 1 | 204 | 1 | 214 | 2.03e-54 | 180 |
| Msa0339120 | AT5G15310.1 | 64.567 | 127 | 42 | 2 | 1 | 125 | 1 | 126 | 2.61e-54 | 180 |
| Msa0339120 | AT4G21440.1 | 57.534 | 146 | 57 | 3 | 1 | 142 | 1 | 145 | 2.02e-53 | 179 |
| Msa0339120 | AT3G01140.1 | 51.397 | 179 | 82 | 3 | 4 | 178 | 47 | 224 | 4.56e-53 | 179 |
| Msa0339120 | AT4G09460.1 | 58.462 | 130 | 51 | 2 | 1 | 128 | 1 | 129 | 5.55e-53 | 174 |
| Msa0339120 | AT1G35515.1 | 56.115 | 139 | 57 | 3 | 1 | 136 | 1 | 138 | 6.61e-53 | 173 |
| Msa0339120 | AT4G38620.1 | 46.961 | 181 | 93 | 2 | 1 | 179 | 1 | 180 | 9.00e-53 | 175 |
| Msa0339120 | AT3G61250.1 | 59.398 | 133 | 51 | 2 | 1 | 131 | 1 | 132 | 9.17e-53 | 175 |
| Msa0339120 | AT5G61420.2 | 53.488 | 172 | 71 | 4 | 1 | 170 | 1 | 165 | 1.67e-52 | 177 |
| Msa0339120 | AT4G28110.1 | 64.407 | 118 | 41 | 1 | 1 | 118 | 1 | 117 | 1.77e-52 | 174 |
| Msa0339120 | AT3G02940.2 | 58.209 | 134 | 53 | 2 | 1 | 132 | 1 | 133 | 1.85e-52 | 175 |
| Msa0339120 | AT3G02940.1 | 58.209 | 134 | 53 | 2 | 1 | 132 | 1 | 133 | 3.45e-52 | 174 |
| Msa0339120 | AT3G02940.3 | 58.209 | 134 | 53 | 2 | 1 | 132 | 1 | 133 | 3.45e-52 | 174 |
| Msa0339120 | AT5G16770.4 | 60.630 | 127 | 47 | 2 | 1 | 125 | 1 | 126 | 3.60e-52 | 174 |
| Msa0339120 | AT5G16770.3 | 60.630 | 127 | 47 | 2 | 1 | 125 | 1 | 126 | 3.60e-52 | 174 |
| Msa0339120 | AT4G05100.1 | 62.500 | 128 | 44 | 3 | 1 | 125 | 1 | 127 | 3.70e-52 | 174 |
| Msa0339120 | AT1G22640.1 | 58.462 | 130 | 51 | 2 | 1 | 128 | 1 | 129 | 6.64e-52 | 172 |
| Msa0339120 | AT5G16770.1 | 60.630 | 127 | 47 | 2 | 1 | 125 | 1 | 126 | 8.97e-52 | 174 |
| Msa0339120 | AT5G16770.2 | 60.630 | 127 | 47 | 2 | 1 | 125 | 1 | 126 | 8.97e-52 | 174 |
| Msa0339120 | AT3G47600.1 | 53.012 | 166 | 64 | 2 | 1 | 166 | 1 | 152 | 2.69e-51 | 172 |
| Msa0339120 | AT3G28470.1 | 36.102 | 313 | 174 | 6 | 1 | 304 | 1 | 296 | 5.63e-51 | 171 |
| Msa0339120 | AT2G16720.1 | 50.000 | 158 | 75 | 3 | 1 | 156 | 1 | 156 | 7.40e-51 | 169 |
| Msa0339120 | AT1G34670.1 | 61.417 | 127 | 46 | 2 | 1 | 125 | 1 | 126 | 1.60e-50 | 171 |
| Msa0339120 | AT5G65230.1 | 61.417 | 127 | 46 | 2 | 1 | 125 | 1 | 126 | 1.80e-50 | 170 |
| Msa0339120 | AT4G17785.2 | 62.500 | 128 | 44 | 3 | 1 | 125 | 1 | 127 | 1.98e-50 | 171 |
| Msa0339120 | AT4G17785.1 | 62.500 | 128 | 44 | 3 | 1 | 125 | 1 | 127 | 2.28e-50 | 171 |
| Msa0339120 | AT5G62470.2 | 63.333 | 120 | 43 | 1 | 1 | 120 | 1 | 119 | 2.35e-50 | 171 |
| Msa0339120 | AT1G79180.1 | 64.655 | 116 | 40 | 1 | 2 | 117 | 4 | 118 | 2.89e-50 | 169 |
| Msa0339120 | AT3G23250.1 | 58.268 | 127 | 52 | 1 | 1 | 127 | 1 | 126 | 5.50e-50 | 167 |
| Msa0339120 | AT5G10280.1 | 59.055 | 127 | 49 | 2 | 1 | 125 | 1 | 126 | 5.75e-50 | 169 |
| Msa0339120 | AT5G60890.1 | 64.103 | 117 | 41 | 1 | 1 | 117 | 1 | 116 | 7.52e-50 | 167 |
| Msa0339120 | AT5G07690.1 | 35.692 | 325 | 171 | 10 | 1 | 307 | 1 | 305 | 8.59e-50 | 169 |
| Msa0339120 | AT2G31180.1 | 62.393 | 117 | 43 | 1 | 1 | 117 | 1 | 116 | 3.42e-49 | 164 |
| Msa0339120 | AT1G74650.1 | 63.559 | 118 | 42 | 1 | 1 | 118 | 1 | 117 | 5.71e-49 | 166 |
| Msa0339120 | AT4G34990.1 | 56.923 | 130 | 53 | 2 | 1 | 128 | 1 | 129 | 9.46e-49 | 164 |
| Msa0339120 | AT4G12350.1 | 56.934 | 137 | 56 | 2 | 1 | 135 | 1 | 136 | 1.06e-48 | 164 |
| Msa0339120 | AT3G28910.1 | 60.800 | 125 | 48 | 1 | 1 | 125 | 1 | 124 | 1.12e-48 | 166 |
| Msa0339120 | AT1G16490.1 | 62.931 | 116 | 42 | 1 | 2 | 117 | 4 | 118 | 1.17e-48 | 164 |
| Msa0339120 | AT1G18570.1 | 58.015 | 131 | 51 | 3 | 1 | 128 | 1 | 130 | 1.26e-48 | 166 |
| Msa0339120 | AT4G22680.1 | 47.953 | 171 | 67 | 4 | 1 | 169 | 1 | 151 | 1.44e-48 | 163 |
| Msa0339120 | AT1G08810.1 | 46.524 | 187 | 94 | 3 | 1 | 182 | 1 | 186 | 1.52e-48 | 164 |
| Msa0339120 | AT1G57560.2 | 43.860 | 228 | 91 | 6 | 1 | 202 | 1 | 217 | 2.22e-48 | 163 |
| Msa0339120 | AT1G57560.1 | 47.917 | 192 | 85 | 5 | 1 | 184 | 1 | 185 | 4.27e-48 | 164 |
| Msa0339120 | AT4G01680.3 | 64.103 | 117 | 41 | 1 | 1 | 117 | 1 | 116 | 4.92e-48 | 161 |
| Msa0339120 | AT1G56160.1 | 62.931 | 116 | 42 | 1 | 2 | 117 | 4 | 118 | 6.92e-48 | 162 |
| Msa0339120 | AT5G62470.1 | 62.500 | 120 | 43 | 2 | 1 | 120 | 1 | 118 | 9.99e-48 | 164 |
| Msa0339120 | AT4G01680.1 | 64.103 | 117 | 41 | 1 | 1 | 117 | 1 | 116 | 1.33e-47 | 163 |
| Msa0339120 | AT5G26660.1 | 57.252 | 131 | 53 | 2 | 1 | 129 | 1 | 130 | 1.55e-47 | 163 |
| Msa0339120 | AT1G09540.1 | 46.739 | 184 | 89 | 3 | 1 | 182 | 1 | 177 | 2.24e-47 | 163 |
| Msa0339120 | AT5G07700.1 | 46.809 | 188 | 88 | 5 | 1 | 184 | 1 | 180 | 3.63e-47 | 162 |
| Msa0339120 | AT5G07700.2 | 46.809 | 188 | 88 | 5 | 1 | 184 | 1 | 180 | 3.63e-47 | 162 |
| Msa0339120 | AT3G62610.1 | 56.923 | 130 | 53 | 2 | 1 | 128 | 1 | 129 | 3.76e-47 | 162 |
| Msa0339120 | AT1G63910.1 | 59.829 | 117 | 46 | 1 | 1 | 117 | 1 | 116 | 3.91e-47 | 162 |
| Msa0339120 | AT5G62320.1 | 42.553 | 188 | 85 | 4 | 2 | 181 | 3 | 175 | 4.09e-47 | 159 |
| Msa0339120 | AT1G06180.1 | 62.393 | 117 | 43 | 1 | 1 | 117 | 1 | 116 | 6.95e-47 | 158 |
| Msa0339120 | AT5G54230.1 | 53.165 | 158 | 63 | 4 | 1 | 150 | 1 | 155 | 1.13e-46 | 160 |
| Msa0339120 | AT1G74080.1 | 55.725 | 131 | 55 | 2 | 1 | 129 | 1 | 130 | 3.32e-46 | 159 |
| Msa0339120 | AT2G47460.1 | 56.198 | 121 | 52 | 1 | 1 | 121 | 1 | 120 | 5.10e-46 | 160 |
| Msa0339120 | AT3G13540.1 | 54.331 | 127 | 55 | 2 | 4 | 128 | 15 | 140 | 1.30e-45 | 155 |
| Msa0339120 | AT3G13890.2 | 58.475 | 118 | 48 | 1 | 1 | 118 | 1 | 117 | 1.53e-45 | 158 |
| Msa0339120 | AT1G66230.1 | 54.615 | 130 | 56 | 2 | 1 | 128 | 1 | 129 | 3.49e-45 | 155 |
| Msa0339120 | AT5G49330.1 | 53.788 | 132 | 57 | 2 | 1 | 129 | 1 | 131 | 3.54e-45 | 157 |
| Msa0339120 | AT3G12820.1 | 60.345 | 116 | 45 | 1 | 3 | 118 | 5 | 119 | 1.44e-44 | 152 |
| Msa0339120 | AT5G16600.1 | 56.693 | 127 | 52 | 2 | 1 | 125 | 1 | 126 | 2.10e-44 | 154 |
| Msa0339120 | AT4G01680.2 | 58.140 | 129 | 41 | 2 | 1 | 117 | 1 | 128 | 3.40e-44 | 154 |
| Msa0339120 | AT3G12720.1 | 55.285 | 123 | 52 | 2 | 6 | 126 | 16 | 137 | 8.36e-44 | 152 |
| Msa0339120 | AT1G79180.2 | 50.336 | 149 | 40 | 2 | 2 | 117 | 4 | 151 | 1.09e-43 | 152 |
| Msa0339120 | AT5G14340.1 | 56.250 | 128 | 51 | 4 | 1 | 125 | 13 | 138 | 3.15e-43 | 150 |
| Msa0339120 | AT3G13890.1 | 54.331 | 127 | 48 | 2 | 1 | 118 | 1 | 126 | 1.68e-42 | 150 |
| Msa0339120 | AT1G74430.1 | 55.118 | 127 | 54 | 2 | 1 | 125 | 1 | 126 | 2.18e-42 | 147 |
| Msa0339120 | AT1G18710.1 | 50.370 | 135 | 64 | 2 | 1 | 133 | 1 | 134 | 5.89e-42 | 146 |
| Msa0339120 | AT2G32460.1 | 55.856 | 111 | 48 | 1 | 12 | 122 | 18 | 127 | 4.91e-40 | 146 |
| Msa0339120 | AT2G32460.2 | 55.856 | 111 | 48 | 1 | 12 | 122 | 6 | 115 | 5.38e-40 | 146 |
| Msa0339120 | AT3G27810.1 | 40.838 | 191 | 106 | 3 | 9 | 199 | 17 | 200 | 5.60e-40 | 140 |
| Msa0339120 | AT5G52600.1 | 58.333 | 108 | 44 | 1 | 9 | 116 | 9 | 115 | 5.76e-40 | 139 |
| Msa0339120 | AT5G55020.1 | 52.941 | 119 | 55 | 1 | 12 | 130 | 26 | 143 | 1.07e-39 | 146 |
| Msa0339120 | AT5G06100.1 | 55.652 | 115 | 50 | 1 | 8 | 122 | 28 | 141 | 2.64e-39 | 144 |
| Msa0339120 | AT5G14750.1 | 56.190 | 105 | 45 | 1 | 13 | 117 | 17 | 120 | 3.81e-39 | 137 |
| Msa0339120 | AT4G26930.1 | 45.395 | 152 | 75 | 3 | 12 | 161 | 19 | 164 | 4.02e-39 | 142 |
| Msa0339120 | AT5G40350.1 | 44.505 | 182 | 83 | 5 | 10 | 175 | 15 | 194 | 5.83e-39 | 137 |
| Msa0339120 | AT5G40330.1 | 56.190 | 105 | 45 | 1 | 13 | 117 | 13 | 116 | 6.01e-39 | 137 |
| Msa0339120 | AT5G06100.5 | 55.652 | 115 | 50 | 1 | 8 | 122 | 28 | 141 | 8.45e-39 | 144 |
| Msa0339120 | AT5G06100.2 | 55.652 | 115 | 50 | 1 | 8 | 122 | 28 | 141 | 8.45e-39 | 144 |
| Msa0339120 | AT5G06100.3 | 55.652 | 115 | 50 | 1 | 8 | 122 | 28 | 141 | 8.45e-39 | 144 |
| Msa0339120 | AT5G06100.4 | 55.652 | 115 | 50 | 1 | 8 | 122 | 28 | 141 | 8.45e-39 | 144 |
| Msa0339120 | AT5G12870.1 | 55.963 | 109 | 47 | 1 | 12 | 120 | 18 | 125 | 1.16e-38 | 138 |
| Msa0339120 | AT3G27920.1 | 55.660 | 106 | 46 | 1 | 13 | 118 | 15 | 119 | 2.69e-38 | 135 |
| Msa0339120 | AT5G35550.1 | 54.128 | 109 | 49 | 1 | 9 | 117 | 11 | 118 | 5.13e-38 | 135 |
| Msa0339120 | AT3G01530.1 | 52.727 | 110 | 51 | 1 | 8 | 117 | 21 | 129 | 1.03e-37 | 133 |
| Msa0339120 | AT3G11440.2 | 51.754 | 114 | 54 | 1 | 9 | 122 | 38 | 150 | 1.17e-37 | 139 |
| Msa0339120 | AT3G11440.3 | 51.754 | 114 | 54 | 1 | 9 | 122 | 38 | 150 | 4.07e-37 | 139 |
| Msa0339120 | AT3G11440.4 | 51.754 | 114 | 54 | 1 | 9 | 122 | 38 | 150 | 4.07e-37 | 139 |
| Msa0339120 | AT3G11440.1 | 51.754 | 114 | 54 | 1 | 9 | 122 | 38 | 150 | 4.07e-37 | 139 |
| Msa0339120 | AT1G48000.1 | 58.654 | 104 | 42 | 1 | 12 | 115 | 32 | 134 | 8.29e-37 | 132 |
| Msa0339120 | AT3G08500.1 | 55.455 | 110 | 48 | 1 | 8 | 117 | 26 | 134 | 1.01e-36 | 134 |
| Msa0339120 | AT4G13480.1 | 58.654 | 104 | 42 | 1 | 13 | 116 | 7 | 109 | 4.26e-36 | 131 |
| Msa0339120 | AT5G52260.1 | 55.652 | 115 | 50 | 1 | 9 | 123 | 9 | 122 | 5.32e-36 | 130 |
| Msa0339120 | AT3G24310.1 | 57.692 | 104 | 43 | 1 | 13 | 116 | 19 | 121 | 6.80e-36 | 130 |
| Msa0339120 | AT4G25560.1 | 55.660 | 106 | 46 | 1 | 13 | 118 | 11 | 115 | 3.41e-35 | 129 |
| Msa0339120 | AT2G26960.1 | 51.402 | 107 | 51 | 1 | 9 | 115 | 17 | 122 | 4.07e-35 | 132 |
| Msa0339120 | AT3G48920.1 | 53.271 | 107 | 49 | 1 | 9 | 115 | 15 | 120 | 1.19e-34 | 127 |
| Msa0339120 | AT1G25340.1 | 38.140 | 215 | 116 | 7 | 10 | 222 | 16 | 215 | 1.60e-34 | 127 |
| Msa0339120 | AT1G66370.1 | 50.862 | 116 | 52 | 2 | 1 | 116 | 1 | 111 | 2.06e-34 | 126 |
| Msa0339120 | AT1G66380.1 | 56.190 | 105 | 45 | 1 | 12 | 116 | 8 | 111 | 7.69e-34 | 121 |
| Msa0339120 | AT3G30210.1 | 55.340 | 103 | 45 | 1 | 13 | 115 | 28 | 129 | 2.14e-33 | 124 |
| Msa0339120 | AT2G47190.1 | 48.673 | 113 | 57 | 1 | 8 | 120 | 16 | 127 | 2.95e-33 | 124 |
| Msa0339120 | AT1G68320.1 | 51.376 | 109 | 52 | 1 | 12 | 120 | 19 | 126 | 8.21e-33 | 123 |
| Msa0339120 | AT1G66390.1 | 55.238 | 105 | 46 | 1 | 12 | 116 | 8 | 111 | 1.17e-32 | 121 |
| Msa0339120 | AT3G53200.1 | 44.295 | 149 | 77 | 3 | 12 | 158 | 9 | 153 | 2.21e-32 | 120 |
| Msa0339120 | AT1G56650.1 | 55.238 | 105 | 46 | 1 | 12 | 116 | 8 | 111 | 2.48e-32 | 120 |
| Msa0339120 | AT3G06490.1 | 53.982 | 113 | 51 | 1 | 8 | 120 | 15 | 126 | 5.79e-32 | 121 |
| Msa0339120 | AT5G49620.1 | 52.212 | 113 | 53 | 1 | 8 | 120 | 22 | 133 | 6.86e-31 | 118 |
| Msa0339120 | AT5G59780.3 | 49.038 | 104 | 52 | 1 | 13 | 116 | 9 | 111 | 2.99e-30 | 115 |
| Msa0339120 | AT3G60460.1 | 47.368 | 114 | 57 | 3 | 9 | 121 | 8 | 119 | 3.36e-30 | 116 |
| Msa0339120 | AT3G46130.1 | 49.038 | 104 | 52 | 1 | 13 | 116 | 10 | 112 | 3.81e-30 | 115 |
| Msa0339120 | AT5G26660.2 | 60.759 | 79 | 31 | 0 | 39 | 117 | 7 | 85 | 9.66e-30 | 115 |
| Msa0339120 | AT1G25340.2 | 36.744 | 215 | 114 | 8 | 10 | 222 | 16 | 210 | 2.30e-29 | 113 |
| Msa0339120 | AT1G25340.3 | 36.744 | 215 | 114 | 8 | 10 | 222 | 16 | 210 | 2.53e-29 | 114 |
| Msa0339120 | AT2G26950.1 | 42.735 | 117 | 63 | 2 | 9 | 122 | 13 | 128 | 1.29e-28 | 114 |
| Msa0339120 | AT3G47600.2 | 49.587 | 121 | 48 | 1 | 46 | 166 | 39 | 146 | 2.49e-28 | 112 |
| Msa0339120 | AT5G14750.3 | 58.228 | 79 | 30 | 1 | 39 | 117 | 11 | 86 | 3.31e-28 | 107 |
| Msa0339120 | AT4G37260.1 | 53.398 | 103 | 46 | 2 | 14 | 116 | 13 | 113 | 4.43e-28 | 111 |
| Msa0339120 | AT3G50060.1 | 50.467 | 107 | 51 | 2 | 10 | 116 | 2 | 106 | 6.83e-28 | 110 |
| Msa0339120 | AT5G35550.2 | 59.494 | 79 | 32 | 0 | 39 | 117 | 43 | 121 | 8.59e-28 | 108 |
| Msa0339120 | AT3G27810.2 | 38.312 | 154 | 89 | 2 | 46 | 199 | 4 | 151 | 1.18e-27 | 106 |
| Msa0339120 | AT2G23290.1 | 53.398 | 103 | 46 | 2 | 14 | 116 | 13 | 113 | 1.19e-27 | 109 |
| Msa0339120 | AT5G67300.1 | 49.533 | 107 | 52 | 2 | 10 | 116 | 2 | 106 | 1.60e-27 | 109 |
| Msa0339120 | AT5G49620.2 | 46.457 | 127 | 53 | 2 | 8 | 120 | 22 | 147 | 2.73e-27 | 108 |
| Msa0339120 | AT5G40350.2 | 42.466 | 146 | 67 | 4 | 46 | 175 | 5 | 149 | 1.57e-26 | 103 |
| Msa0339120 | AT3G55730.1 | 51.402 | 107 | 50 | 2 | 14 | 120 | 56 | 160 | 1.68e-26 | 108 |
| Msa0339120 | AT3G53200.2 | 46.154 | 117 | 58 | 2 | 44 | 158 | 7 | 120 | 1.71e-26 | 104 |
| Msa0339120 | AT1G18960.1 | 42.188 | 128 | 66 | 4 | 14 | 141 | 10 | 129 | 2.27e-25 | 103 |
| Msa0339120 | AT3G09230.1 | 45.794 | 107 | 56 | 2 | 14 | 120 | 55 | 159 | 4.33e-25 | 104 |
| Msa0339120 | AT5G59780.2 | 57.534 | 73 | 31 | 0 | 44 | 116 | 18 | 90 | 5.29e-25 | 100 |
| Msa0339120 | AT3G46130.3 | 58.333 | 72 | 30 | 0 | 45 | 116 | 9 | 80 | 5.47e-25 | 100 |
| Msa0339120 | AT3G12820.2 | 61.429 | 70 | 27 | 0 | 49 | 118 | 2 | 71 | 6.07e-25 | 99.8 |
| Msa0339120 | AT3G46130.4 | 57.534 | 73 | 31 | 0 | 44 | 116 | 18 | 90 | 8.82e-25 | 100 |
| Msa0339120 | AT2G39880.1 | 49.515 | 103 | 50 | 2 | 14 | 116 | 50 | 150 | 1.57e-24 | 102 |
| Msa0339120 | AT1G66380.3 | 62.500 | 72 | 27 | 0 | 45 | 116 | 7 | 78 | 2.53e-24 | 95.5 |
| Msa0339120 | AT3G27785.1 | 45.370 | 108 | 57 | 2 | 9 | 116 | 184 | 289 | 3.67e-24 | 102 |
| Msa0339120 | AT1G69560.1 | 43.119 | 109 | 60 | 2 | 9 | 117 | 102 | 208 | 1.24e-23 | 99.4 |
| Msa0339120 | AT1G69560.2 | 43.119 | 109 | 60 | 2 | 9 | 117 | 118 | 224 | 1.54e-23 | 99.4 |
| Msa0339120 | AT4G18770.1 | 43.119 | 109 | 60 | 2 | 9 | 117 | 212 | 318 | 2.97e-23 | 99.8 |
| Msa0339120 | AT2G25230.1 | 45.045 | 111 | 58 | 3 | 9 | 119 | 21 | 128 | 3.49e-23 | 96.3 |
| Msa0339120 | AT1G17950.1 | 29.565 | 230 | 122 | 9 | 14 | 237 | 5 | 200 | 4.73e-23 | 96.3 |
| Msa0339120 | AT5G40360.1 | 43.269 | 104 | 57 | 2 | 12 | 115 | 156 | 257 | 5.34e-23 | 98.2 |
| Msa0339120 | AT5G58850.1 | 42.453 | 106 | 59 | 2 | 11 | 116 | 102 | 205 | 2.37e-22 | 97.1 |
| Msa0339120 | AT1G22640.3 | 52.778 | 72 | 32 | 1 | 59 | 128 | 1 | 72 | 1.22e-21 | 91.3 |
| Msa0339120 | AT1G26780.1 | 32.632 | 190 | 96 | 5 | 14 | 178 | 98 | 280 | 1.48e-21 | 92.8 |
| Msa0339120 | AT3G09370.2 | 45.631 | 103 | 54 | 2 | 14 | 116 | 135 | 235 | 2.52e-21 | 94.7 |
| Msa0339120 | AT3G09370.3 | 45.631 | 103 | 54 | 2 | 14 | 116 | 143 | 243 | 2.89e-21 | 94.4 |
| Msa0339120 | AT5G11050.1 | 40.566 | 106 | 61 | 2 | 11 | 116 | 102 | 205 | 3.14e-21 | 93.6 |
| Msa0339120 | AT3G09370.1 | 45.631 | 103 | 54 | 2 | 14 | 116 | 130 | 230 | 3.17e-21 | 94.4 |
| Msa0339120 | AT5G02320.1 | 46.154 | 104 | 54 | 2 | 14 | 117 | 127 | 228 | 3.49e-21 | 94.4 |
| Msa0339120 | AT5G02320.2 | 46.154 | 104 | 54 | 2 | 14 | 117 | 127 | 228 | 3.49e-21 | 94.4 |
| Msa0339120 | AT5G02320.3 | 46.154 | 104 | 54 | 2 | 14 | 117 | 67 | 168 | 4.45e-21 | 93.6 |
| Msa0339120 | AT1G26780.2 | 32.065 | 184 | 93 | 5 | 14 | 172 | 98 | 274 | 4.56e-21 | 92.8 |
| Msa0339120 | AT1G73410.1 | 43.689 | 103 | 56 | 2 | 14 | 116 | 6 | 106 | 1.84e-20 | 89.0 |
| Msa0339120 | AT1G71030.2 | 51.316 | 76 | 35 | 1 | 52 | 125 | 5 | 80 | 2.88e-20 | 87.0 |
| Msa0339120 | AT1G71030.1 | 51.316 | 76 | 35 | 1 | 52 | 125 | 19 | 94 | 3.56e-20 | 87.0 |
| Msa0339120 | AT1G73410.2 | 43.689 | 103 | 56 | 2 | 14 | 116 | 6 | 106 | 3.71e-20 | 87.0 |
| Msa0339120 | AT5G17800.1 | 40.777 | 103 | 59 | 2 | 14 | 116 | 93 | 193 | 6.35e-20 | 89.0 |
| Msa0339120 | AT3G29020.1 | 37.398 | 123 | 72 | 3 | 14 | 136 | 65 | 182 | 2.01e-19 | 85.9 |
| Msa0339120 | AT4G33450.1 | 37.226 | 137 | 70 | 4 | 9 | 144 | 14 | 135 | 2.86e-19 | 85.9 |
| Msa0339120 | AT1G66380.2 | 47.561 | 82 | 42 | 1 | 12 | 93 | 8 | 88 | 3.71e-19 | 81.6 |
| Msa0339120 | AT3G23250.2 | 56.250 | 64 | 28 | 0 | 59 | 122 | 1 | 64 | 4.05e-19 | 84.7 |
| Msa0339120 | AT3G29020.2 | 35.252 | 139 | 81 | 4 | 14 | 148 | 67 | 200 | 5.10e-19 | 86.3 |
| Msa0339120 | AT5G40430.1 | 38.333 | 120 | 70 | 3 | 9 | 128 | 49 | 164 | 8.45e-19 | 84.7 |
| Msa0339120 | AT4G32730.1 | 41.346 | 104 | 59 | 2 | 14 | 117 | 87 | 188 | 1.30e-18 | 87.0 |
| Msa0339120 | AT5G14750.4 | 55.932 | 59 | 26 | 0 | 59 | 117 | 1 | 59 | 1.35e-18 | 81.3 |
| Msa0339120 | AT5G14750.2 | 55.932 | 59 | 26 | 0 | 59 | 117 | 1 | 59 | 1.35e-18 | 81.3 |
| Msa0339120 | AT4G32730.5 | 41.346 | 104 | 59 | 2 | 14 | 117 | 87 | 188 | 1.42e-18 | 87.0 |
| Msa0339120 | AT4G32730.4 | 41.346 | 104 | 59 | 2 | 14 | 117 | 87 | 188 | 1.42e-18 | 87.0 |
| Msa0339120 | AT4G32730.3 | 41.346 | 104 | 59 | 2 | 14 | 117 | 87 | 188 | 1.42e-18 | 87.0 |
| Msa0339120 | AT4G32730.2 | 41.346 | 104 | 59 | 2 | 14 | 117 | 87 | 188 | 1.42e-18 | 87.0 |
| Msa0339120 | AT5G11510.3 | 37.956 | 137 | 77 | 4 | 14 | 144 | 81 | 215 | 1.83e-18 | 86.7 |
| Msa0339120 | AT5G11510.1 | 37.956 | 137 | 77 | 4 | 14 | 144 | 81 | 215 | 1.83e-18 | 86.7 |
| Msa0339120 | AT5G11510.4 | 37.956 | 137 | 77 | 4 | 14 | 144 | 81 | 215 | 1.83e-18 | 86.7 |
| Msa0339120 | AT5G11510.5 | 37.956 | 137 | 77 | 4 | 14 | 144 | 81 | 215 | 2.03e-18 | 86.3 |
| Msa0339120 | AT5G11510.2 | 37.956 | 137 | 77 | 4 | 14 | 144 | 81 | 215 | 2.07e-18 | 86.3 |
| Msa0339120 | AT1G14350.2 | 42.000 | 100 | 56 | 2 | 17 | 116 | 28 | 125 | 7.72e-16 | 78.2 |
| Msa0339120 | AT1G14350.1 | 42.000 | 100 | 56 | 2 | 17 | 116 | 28 | 125 | 7.72e-16 | 78.2 |
| Msa0339120 | AT2G02820.1 | 41.000 | 100 | 57 | 2 | 17 | 116 | 33 | 130 | 1.43e-15 | 77.4 |
| Msa0339120 | AT4G00540.2 | 38.889 | 108 | 63 | 2 | 12 | 117 | 101 | 207 | 1.50e-15 | 77.0 |
| Msa0339120 | AT2G02820.3 | 41.000 | 100 | 57 | 2 | 17 | 116 | 33 | 130 | 1.65e-15 | 76.3 |
| Msa0339120 | AT2G02820.2 | 41.000 | 100 | 57 | 2 | 17 | 116 | 33 | 130 | 1.80e-15 | 77.0 |
| Msa0339120 | AT2G37630.1 | 36.066 | 122 | 74 | 3 | 17 | 136 | 7 | 126 | 1.82e-15 | 76.6 |
| Msa0339120 | AT4G00540.1 | 38.889 | 108 | 63 | 2 | 12 | 117 | 99 | 205 | 2.08e-15 | 77.0 |
| Msa0339120 | AT5G39700.1 | 35.514 | 107 | 67 | 2 | 9 | 115 | 51 | 155 | 4.59e-13 | 67.4 |
| Msa0339120 | AT5G61420.1 | 45.055 | 91 | 42 | 3 | 82 | 170 | 2 | 86 | 8.87e-12 | 65.1 |
| Msa0339120 | AT5G59780.1 | 58.140 | 43 | 18 | 0 | 74 | 116 | 4 | 46 | 2.22e-11 | 62.0 |
| Msa0339120 | AT3G46130.2 | 58.140 | 43 | 18 | 0 | 74 | 116 | 4 | 46 | 3.16e-11 | 62.0 |
| Msa0339120 | AT4G25560.2 | 54.167 | 48 | 22 | 0 | 71 | 118 | 2 | 49 | 4.54e-11 | 62.0 |
| Msa0339120 | AT3G28910.2 | 60.417 | 48 | 19 | 0 | 78 | 125 | 1 | 48 | 6.91e-11 | 62.0 |
Find 51 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATGGCTTAACTATTTA+AGG | 0.112532 | 2_4:-60055812 | Msa0339120:CDS |
| TTGAGCTTTGTATCTTCTTC+TGG | 0.199846 | 2_4:+60056012 | None:intergenic |
| GACTCTTGGTTATGGTAAAA+AGG | 0.206227 | 2_4:+60055082 | None:intergenic |
| TGCACTCTTTATGCTAATAT+TGG | 0.222426 | 2_4:-60055741 | Msa0339120:CDS |
| AACATGGAACTGGTGGAAAT+TGG | 0.280847 | 2_4:-60055975 | Msa0339120:CDS |
| ACAAGACTTTCTTTCATCAT+AGG | 0.287701 | 2_4:+60054998 | None:intergenic |
| TGTTGGTGTTTGGTTGTAAT+AGG | 0.304069 | 2_4:+60055174 | None:intergenic |
| AAAGAAAGTCTTGTCATGTT+TGG | 0.330975 | 2_4:-60054989 | Msa0339120:CDS |
| AATTCTCCATGCTTAATGTT+TGG | 0.347724 | 2_4:+60055789 | None:intergenic |
| AAGATGTGTTTGTTGGTGTT+TGG | 0.363740 | 2_4:+60055164 | None:intergenic |
| GGGAAACAAGAAGAAATAAT+GGG | 0.382296 | 2_4:-60054926 | Msa0339120:CDS |
| AATAGTGGTAGTTGTAATAA+TGG | 0.383368 | 2_4:-60054719 | Msa0339120:CDS |
| AATTACTAGTACTACACCTT+TGG | 0.385674 | 2_4:-60054783 | Msa0339120:CDS |
| TGGGAAACAAGAAGAAATAA+TGG | 0.387514 | 2_4:-60054927 | Msa0339120:CDS |
| AACCATTGAGTAAGGACTCT+TGG | 0.431488 | 2_4:+60055068 | None:intergenic |
| CAATGAGAAGAGGTTAGATA+TGG | 0.440200 | 2_4:+60055202 | None:intergenic |
| CAAGACTTTCTTTCATCATA+GGG | 0.452330 | 2_4:+60054999 | None:intergenic |
| GTTGTGAAAGATGTGTTTGT+TGG | 0.453635 | 2_4:+60055157 | None:intergenic |
| AGTTCATCTGATGGAAGTCT+TGG | 0.457156 | 2_4:-60054947 | Msa0339120:CDS |
| GAACAGAAAATTGTTGTTCA+AGG | 0.466343 | 2_4:+60055131 | None:intergenic |
| TGAGTAAGGACTCTTGGTTA+TGG | 0.482737 | 2_4:+60055074 | None:intergenic |
| AACCAAGAGTCCTTACTCAA+TGG | 0.484275 | 2_4:-60055070 | Msa0339120:CDS |
| ACTACTAAAACCATTGAGTA+AGG | 0.492586 | 2_4:+60055060 | None:intergenic |
| ATATCATTATCAGTTCTTCC+AGG | 0.493883 | 2_4:+60055298 | None:intergenic |
| TTAATTACTAGTAGTAATAG+TGG | 0.494371 | 2_4:-60054734 | Msa0339120:CDS |
| ATTATAGCTGCTCAATTACC+TGG | 0.503307 | 2_4:-60055316 | Msa0339120:CDS |
| AACAGAAAATTGTTGTTCAA+GGG | 0.506500 | 2_4:+60055132 | None:intergenic |
| GTATCTTCTTCTGGAGACCA+TGG | 0.509592 | 2_4:+60056021 | None:intergenic |
| AACAAGTTCAATCTTAGTCA+TGG | 0.515420 | 2_4:-60054881 | Msa0339120:CDS |
| GTTCATCTGATGGAAGTCTT+GGG | 0.521622 | 2_4:-60054946 | Msa0339120:CDS |
| TAACCAATGGGAAAGAGAAA+AGG | 0.522948 | 2_4:-60054840 | Msa0339120:CDS |
| TTTATGCTAATATTGGAAGC+AGG | 0.525461 | 2_4:-60055734 | Msa0339120:intron |
| AGTTGTTGCAGTTCATCTGA+TGG | 0.532249 | 2_4:-60054956 | Msa0339120:CDS |
| TCTTGTCATGTTTGGAAGTG+AGG | 0.538114 | 2_4:-60054981 | Msa0339120:CDS |
| GACAAAGCAAATGTGAAGAA+AGG | 0.543257 | 2_4:-60056045 | Msa0339120:CDS |
| TGTTGTTGATGTTAACCAAT+GGG | 0.544924 | 2_4:-60054852 | Msa0339120:CDS |
| CTTGTCATGTTTGGAAGTGA+GGG | 0.545796 | 2_4:-60054980 | Msa0339120:CDS |
| TTAAGGCCAAACATTAAGCA+TGG | 0.557076 | 2_4:-60055795 | Msa0339120:CDS |
| TATTGATGAAAACAAGATGG+AGG | 0.559376 | 2_4:-60054687 | Msa0339120:CDS |
| GAGATTGAGCTACTTGATGA+AGG | 0.559668 | 2_4:+60055109 | None:intergenic |
| AAGACTGTGTTATGAGATTG+AGG | 0.571621 | 2_4:+60055226 | None:intergenic |
| ATTGATGAAAACAAGATGGA+GGG | 0.583400 | 2_4:-60054686 | Msa0339120:CDS |
| TGGTGTTTGGTTGTAATAGG+AGG | 0.585503 | 2_4:+60055177 | None:intergenic |
| ACATTTGCTTTGTCACAGCA+AGG | 0.588276 | 2_4:+60056054 | None:intergenic |
| ATAGGAGGTGCAATGAGAAG+AGG | 0.597376 | 2_4:+60055192 | None:intergenic |
| TACTCAAGATCATAATCCAA+AGG | 0.614612 | 2_4:+60054767 | None:intergenic |
| GAGTATTGATGAAAACAAGA+TGG | 0.617655 | 2_4:-60054690 | Msa0339120:CDS |
| ATGTTGTTGATGTTAACCAA+TGG | 0.639344 | 2_4:-60054853 | Msa0339120:CDS |
| GGAAACAAGAAGAAATAATG+GGG | 0.651361 | 2_4:-60054925 | Msa0339120:CDS |
| TTGATGAAAACAAGATGGAG+GGG | 0.659305 | 2_4:-60054685 | Msa0339120:CDS |
| CAAATGTGAAGAAAGGACCA+TGG | 0.708465 | 2_4:-60056038 | Msa0339120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATGTTATATATCTTTTTT+AGG | - | chr2_4:60054866-60054885 | Msa0339120:CDS | 15.0% |
| !! | TAATTTCAAAGTAGATTATT+AGG | + | chr2_4:60055123-60055142 | None:intergenic | 15.0% |
| !!! | TATTTTCATGATATTGTTTT+AGG | - | chr2_4:60055385-60055404 | Msa0339120:intron | 15.0% |
| !! | ATAATGATATAAAAAACTAC+TGG | - | chr2_4:60055445-60055464 | Msa0339120:intron | 15.0% |
| !!! | TCATGTTATATATCTTTTTT+AGG | - | chr2_4:60054866-60054885 | Msa0339120:CDS | 15.0% |
| !! | TAATTTCAAAGTAGATTATT+AGG | + | chr2_4:60055123-60055142 | None:intergenic | 15.0% |
| !!! | TATTTTCATGATATTGTTTT+AGG | - | chr2_4:60055385-60055404 | Msa0339120:intron | 15.0% |
| !! | ATAATGATATAAAAAACTAC+TGG | - | chr2_4:60055445-60055464 | Msa0339120:intron | 15.0% |
| !!! | AAAGAGTATATAGAAAAACA+TGG | - | chr2_4:60054739-60054758 | Msa0339120:CDS | 20.0% |
| !!! | TATATAACATGAGATTTGTT+AGG | + | chr2_4:60054858-60054877 | None:intergenic | 20.0% |
| !!! | ATATATCTTTTTTAGGTCTA+AGG | - | chr2_4:60054873-60054892 | Msa0339120:CDS | 20.0% |
| !! | TTAATTACTAGTAGTAATAG+TGG | - | chr2_4:60055996-60056015 | Msa0339120:CDS | 20.0% |
| !!! | AAAGAGTATATAGAAAAACA+TGG | - | chr2_4:60054739-60054758 | Msa0339120:CDS | 20.0% |
| !!! | TATATAACATGAGATTTGTT+AGG | + | chr2_4:60054858-60054877 | None:intergenic | 20.0% |
| !!! | ATATATCTTTTTTAGGTCTA+AGG | - | chr2_4:60054873-60054892 | Msa0339120:CDS | 20.0% |
| !! | TTAATTACTAGTAGTAATAG+TGG | - | chr2_4:60055996-60056015 | Msa0339120:CDS | 20.0% |
| ! | TATATAGAAAAACATGGAAC+TGG | - | chr2_4:60054745-60054764 | Msa0339120:CDS | 25.0% |
| ! | AAAAGTTGAAGCAAAAAAAG+GGG | + | chr2_4:60055183-60055202 | None:intergenic | 25.0% |
| ! | CAAAAGTTGAAGCAAAAAAA+GGG | + | chr2_4:60055184-60055203 | None:intergenic | 25.0% |
| ! | TCAAAAGTTGAAGCAAAAAA+AGG | + | chr2_4:60055185-60055204 | None:intergenic | 25.0% |
| !!! | GATGAGGTTTTAATCAAAAT+GGG | + | chr2_4:60055249-60055268 | None:intergenic | 25.0% |
| !!! | AGATGAGGTTTTAATCAAAA+TGG | + | chr2_4:60055250-60055269 | None:intergenic | 25.0% |
| ! | ATATAGGTAGAATATAGATG+AGG | + | chr2_4:60055265-60055284 | None:intergenic | 25.0% |
| ! | AATCCATGTAGTCAAAATAT+AGG | + | chr2_4:60055281-60055300 | None:intergenic | 25.0% |
| ! | ATCCACTCATATATATTGTT+TGG | - | chr2_4:60055324-60055343 | Msa0339120:CDS | 25.0% |
| ! | AACCAAACAATATATATGAG+TGG | + | chr2_4:60055329-60055348 | None:intergenic | 25.0% |
| !!! | TTTCATGATATTGTTTTAGG+TGG | - | chr2_4:60055388-60055407 | Msa0339120:intron | 25.0% |
| !! | AACAGAAAATTGTTGTTCAA+GGG | + | chr2_4:60055601-60055620 | None:intergenic | 25.0% |
| ! | AATAGTGGTAGTTGTAATAA+TGG | - | chr2_4:60056011-60056030 | Msa0339120:CDS | 25.0% |
| ! | TATATAGAAAAACATGGAAC+TGG | - | chr2_4:60054745-60054764 | Msa0339120:CDS | 25.0% |
| ! | AAAAGTTGAAGCAAAAAAAG+GGG | + | chr2_4:60055183-60055202 | None:intergenic | 25.0% |
| ! | CAAAAGTTGAAGCAAAAAAA+GGG | + | chr2_4:60055184-60055203 | None:intergenic | 25.0% |
| ! | TCAAAAGTTGAAGCAAAAAA+AGG | + | chr2_4:60055185-60055204 | None:intergenic | 25.0% |
| !!! | GATGAGGTTTTAATCAAAAT+GGG | + | chr2_4:60055249-60055268 | None:intergenic | 25.0% |
| !!! | AGATGAGGTTTTAATCAAAA+TGG | + | chr2_4:60055250-60055269 | None:intergenic | 25.0% |
| ! | ATATAGGTAGAATATAGATG+AGG | + | chr2_4:60055265-60055284 | None:intergenic | 25.0% |
| ! | AATCCATGTAGTCAAAATAT+AGG | + | chr2_4:60055281-60055300 | None:intergenic | 25.0% |
| ! | ATCCACTCATATATATTGTT+TGG | - | chr2_4:60055324-60055343 | Msa0339120:CDS | 25.0% |
| ! | AACCAAACAATATATATGAG+TGG | + | chr2_4:60055329-60055348 | None:intergenic | 25.0% |
| !!! | TTTCATGATATTGTTTTAGG+TGG | - | chr2_4:60055388-60055407 | Msa0339120:intron | 25.0% |
| !! | AACAGAAAATTGTTGTTCAA+GGG | + | chr2_4:60055601-60055620 | None:intergenic | 25.0% |
| ! | AATAGTGGTAGTTGTAATAA+TGG | - | chr2_4:60056011-60056030 | Msa0339120:CDS | 25.0% |
| AAAAAGCTGGTAAGAATTCT+TGG | - | chr2_4:60054791-60054810 | Msa0339120:CDS | 30.0% | |
| GAAAAAGTTGTAGATTGAGA+TGG | - | chr2_4:60054903-60054922 | Msa0339120:CDS | 30.0% | |
| TGAGATGGCTTAACTATTTA+AGG | - | chr2_4:60054918-60054937 | Msa0339120:CDS | 30.0% | |
| AATTCTCCATGCTTAATGTT+TGG | + | chr2_4:60054944-60054963 | None:intergenic | 30.0% | |
| TGCACTCTTTATGCTAATAT+TGG | - | chr2_4:60054989-60055008 | Msa0339120:CDS | 30.0% | |
| TTTATGCTAATATTGGAAGC+AGG | - | chr2_4:60054996-60055015 | Msa0339120:CDS | 30.0% | |
| AAAGAAAACGCCAATATTTC+TGG | + | chr2_4:60055160-60055179 | None:intergenic | 30.0% | |
| !!! | CTACCTATATTTTGACTACA+TGG | - | chr2_4:60055275-60055294 | Msa0339120:CDS | 30.0% |
| ATATCATTATCAGTTCTTCC+AGG | + | chr2_4:60055435-60055454 | None:intergenic | 30.0% | |
| ! | GAACAGAAAATTGTTGTTCA+AGG | + | chr2_4:60055602-60055621 | None:intergenic | 30.0% |
| ACTCTTGGTTATGGTAAAAA+GGG | + | chr2_4:60055650-60055669 | None:intergenic | 30.0% | |
| ACTACTAAAACCATTGAGTA+AGG | + | chr2_4:60055673-60055692 | None:intergenic | 30.0% | |
| !!! | GTTTTGAAGTTGATATTGCA+TGG | + | chr2_4:60055712-60055731 | None:intergenic | 30.0% |
| CAAGACTTTCTTTCATCATA+GGG | + | chr2_4:60055734-60055753 | None:intergenic | 30.0% | |
| ACAAGACTTTCTTTCATCAT+AGG | + | chr2_4:60055735-60055754 | None:intergenic | 30.0% | |
| ! | AAAGAAAGTCTTGTCATGTT+TGG | - | chr2_4:60055741-60055760 | Msa0339120:CDS | 30.0% |
| TGGGAAACAAGAAGAAATAA+TGG | - | chr2_4:60055803-60055822 | Msa0339120:CDS | 30.0% | |
| GGGAAACAAGAAGAAATAAT+GGG | - | chr2_4:60055804-60055823 | Msa0339120:CDS | 30.0% | |
| GGAAACAAGAAGAAATAATG+GGG | - | chr2_4:60055805-60055824 | Msa0339120:CDS | 30.0% | |
| AACAAGTTCAATCTTAGTCA+TGG | - | chr2_4:60055849-60055868 | Msa0339120:intron | 30.0% | |
| ATGTTGTTGATGTTAACCAA+TGG | - | chr2_4:60055877-60055896 | Msa0339120:intron | 30.0% | |
| TGTTGTTGATGTTAACCAAT+GGG | - | chr2_4:60055878-60055897 | Msa0339120:intron | 30.0% | |
| AATTACTAGTACTACACCTT+TGG | - | chr2_4:60055947-60055966 | Msa0339120:intron | 30.0% | |
| TACTCAAGATCATAATCCAA+AGG | + | chr2_4:60055966-60055985 | None:intergenic | 30.0% | |
| !! | GAGTATTGATGAAAACAAGA+TGG | - | chr2_4:60056040-60056059 | Msa0339120:CDS | 30.0% |
| TATTGATGAAAACAAGATGG+AGG | - | chr2_4:60056043-60056062 | Msa0339120:CDS | 30.0% | |
| ATTGATGAAAACAAGATGGA+GGG | - | chr2_4:60056044-60056063 | Msa0339120:CDS | 30.0% | |
| AAAAAGCTGGTAAGAATTCT+TGG | - | chr2_4:60054791-60054810 | Msa0339120:CDS | 30.0% | |
| GAAAAAGTTGTAGATTGAGA+TGG | - | chr2_4:60054903-60054922 | Msa0339120:CDS | 30.0% | |
| TGAGATGGCTTAACTATTTA+AGG | - | chr2_4:60054918-60054937 | Msa0339120:CDS | 30.0% | |
| AATTCTCCATGCTTAATGTT+TGG | + | chr2_4:60054944-60054963 | None:intergenic | 30.0% | |
| TGCACTCTTTATGCTAATAT+TGG | - | chr2_4:60054989-60055008 | Msa0339120:CDS | 30.0% | |
| TTTATGCTAATATTGGAAGC+AGG | - | chr2_4:60054996-60055015 | Msa0339120:CDS | 30.0% | |
| AAAGAAAACGCCAATATTTC+TGG | + | chr2_4:60055160-60055179 | None:intergenic | 30.0% | |
| !!! | CTACCTATATTTTGACTACA+TGG | - | chr2_4:60055275-60055294 | Msa0339120:CDS | 30.0% |
| ATATCATTATCAGTTCTTCC+AGG | + | chr2_4:60055435-60055454 | None:intergenic | 30.0% | |
| ! | GAACAGAAAATTGTTGTTCA+AGG | + | chr2_4:60055602-60055621 | None:intergenic | 30.0% |
| ACTCTTGGTTATGGTAAAAA+GGG | + | chr2_4:60055650-60055669 | None:intergenic | 30.0% | |
| ACTACTAAAACCATTGAGTA+AGG | + | chr2_4:60055673-60055692 | None:intergenic | 30.0% | |
| !!! | GTTTTGAAGTTGATATTGCA+TGG | + | chr2_4:60055712-60055731 | None:intergenic | 30.0% |
| CAAGACTTTCTTTCATCATA+GGG | + | chr2_4:60055734-60055753 | None:intergenic | 30.0% | |
| ACAAGACTTTCTTTCATCAT+AGG | + | chr2_4:60055735-60055754 | None:intergenic | 30.0% | |
| ! | AAAGAAAGTCTTGTCATGTT+TGG | - | chr2_4:60055741-60055760 | Msa0339120:CDS | 30.0% |
| TGGGAAACAAGAAGAAATAA+TGG | - | chr2_4:60055803-60055822 | Msa0339120:CDS | 30.0% | |
| GGGAAACAAGAAGAAATAAT+GGG | - | chr2_4:60055804-60055823 | Msa0339120:CDS | 30.0% | |
| GGAAACAAGAAGAAATAATG+GGG | - | chr2_4:60055805-60055824 | Msa0339120:CDS | 30.0% | |
| AACAAGTTCAATCTTAGTCA+TGG | - | chr2_4:60055849-60055868 | Msa0339120:intron | 30.0% | |
| ATGTTGTTGATGTTAACCAA+TGG | - | chr2_4:60055877-60055896 | Msa0339120:intron | 30.0% | |
| TGTTGTTGATGTTAACCAAT+GGG | - | chr2_4:60055878-60055897 | Msa0339120:intron | 30.0% | |
| AATTACTAGTACTACACCTT+TGG | - | chr2_4:60055947-60055966 | Msa0339120:intron | 30.0% | |
| TACTCAAGATCATAATCCAA+AGG | + | chr2_4:60055966-60055985 | None:intergenic | 30.0% | |
| !! | GAGTATTGATGAAAACAAGA+TGG | - | chr2_4:60056040-60056059 | Msa0339120:CDS | 30.0% |
| TATTGATGAAAACAAGATGG+AGG | - | chr2_4:60056043-60056062 | Msa0339120:CDS | 30.0% | |
| ATTGATGAAAACAAGATGGA+GGG | - | chr2_4:60056044-60056063 | Msa0339120:CDS | 30.0% | |
| GACAAAGCAAATGTGAAGAA+AGG | - | chr2_4:60054685-60054704 | Msa0339120:CDS | 35.0% | |
| ! | TTGAGCTTTGTATCTTCTTC+TGG | + | chr2_4:60054721-60054740 | None:intergenic | 35.0% |
| ATAGAAAAACATGGAACTGG+TGG | - | chr2_4:60054748-60054767 | Msa0339120:CDS | 35.0% | |
| ATTTCTCTTCCTCAAAAAGC+TGG | - | chr2_4:60054778-60054797 | Msa0339120:CDS | 35.0% | |
| ! | GAATTCTTACCAGCTTTTTG+AGG | + | chr2_4:60054790-60054809 | None:intergenic | 35.0% |
| !!! | TTTTTAGGTCTAAGGAGATG+TGG | - | chr2_4:60054881-60054900 | Msa0339120:CDS | 35.0% |
| TTAAGGCCAAACATTAAGCA+TGG | - | chr2_4:60054935-60054954 | Msa0339120:CDS | 35.0% | |
| CTATCCAGATCCAGAAATAT+TGG | - | chr2_4:60055147-60055166 | Msa0339120:CDS | 35.0% | |
| ATTATAGCTGCTCAATTACC+TGG | - | chr2_4:60055414-60055433 | Msa0339120:intron | 35.0% | |
| AAGACTGTGTTATGAGATTG+AGG | + | chr2_4:60055507-60055526 | None:intergenic | 35.0% | |
| CAATGAGAAGAGGTTAGATA+TGG | + | chr2_4:60055531-60055550 | None:intergenic | 35.0% | |
| ! | TGTTGGTGTTTGGTTGTAAT+AGG | + | chr2_4:60055559-60055578 | None:intergenic | 35.0% |
| ! | AAGATGTGTTTGTTGGTGTT+TGG | + | chr2_4:60055569-60055588 | None:intergenic | 35.0% |
| GTTGTGAAAGATGTGTTTGT+TGG | + | chr2_4:60055576-60055595 | None:intergenic | 35.0% | |
| GACTCTTGGTTATGGTAAAA+AGG | + | chr2_4:60055651-60055670 | None:intergenic | 35.0% | |
| TAACCAATGGGAAAGAGAAA+AGG | - | chr2_4:60055890-60055909 | Msa0339120:intron | 35.0% | |
| TTGATGAAAACAAGATGGAG+GGG | - | chr2_4:60056045-60056064 | Msa0339120:CDS | 35.0% | |
| GACAAAGCAAATGTGAAGAA+AGG | - | chr2_4:60054685-60054704 | Msa0339120:CDS | 35.0% | |
| ! | TTGAGCTTTGTATCTTCTTC+TGG | + | chr2_4:60054721-60054740 | None:intergenic | 35.0% |
| ATAGAAAAACATGGAACTGG+TGG | - | chr2_4:60054748-60054767 | Msa0339120:CDS | 35.0% | |
| ATTTCTCTTCCTCAAAAAGC+TGG | - | chr2_4:60054778-60054797 | Msa0339120:CDS | 35.0% | |
| ! | GAATTCTTACCAGCTTTTTG+AGG | + | chr2_4:60054790-60054809 | None:intergenic | 35.0% |
| !!! | TTTTTAGGTCTAAGGAGATG+TGG | - | chr2_4:60054881-60054900 | Msa0339120:CDS | 35.0% |
| TTAAGGCCAAACATTAAGCA+TGG | - | chr2_4:60054935-60054954 | Msa0339120:CDS | 35.0% | |
| CTATCCAGATCCAGAAATAT+TGG | - | chr2_4:60055147-60055166 | Msa0339120:CDS | 35.0% | |
| ATTATAGCTGCTCAATTACC+TGG | - | chr2_4:60055414-60055433 | Msa0339120:intron | 35.0% | |
| AAGACTGTGTTATGAGATTG+AGG | + | chr2_4:60055507-60055526 | None:intergenic | 35.0% | |
| CAATGAGAAGAGGTTAGATA+TGG | + | chr2_4:60055531-60055550 | None:intergenic | 35.0% | |
| ! | TGTTGGTGTTTGGTTGTAAT+AGG | + | chr2_4:60055559-60055578 | None:intergenic | 35.0% |
| ! | AAGATGTGTTTGTTGGTGTT+TGG | + | chr2_4:60055569-60055588 | None:intergenic | 35.0% |
| GTTGTGAAAGATGTGTTTGT+TGG | + | chr2_4:60055576-60055595 | None:intergenic | 35.0% | |
| GACTCTTGGTTATGGTAAAA+AGG | + | chr2_4:60055651-60055670 | None:intergenic | 35.0% | |
| TAACCAATGGGAAAGAGAAA+AGG | - | chr2_4:60055890-60055909 | Msa0339120:intron | 35.0% | |
| TTGATGAAAACAAGATGGAG+GGG | - | chr2_4:60056045-60056064 | Msa0339120:CDS | 35.0% | |
| ACATTTGCTTTGTCACAGCA+AGG | + | chr2_4:60054679-60054698 | None:intergenic | 40.0% | |
| CAAATGTGAAGAAAGGACCA+TGG | - | chr2_4:60054692-60054711 | Msa0339120:CDS | 40.0% | |
| AACATGGAACTGGTGGAAAT+TGG | - | chr2_4:60054755-60054774 | Msa0339120:CDS | 40.0% | |
| !! | AACGCCAATATTTCTGGATC+TGG | + | chr2_4:60055154-60055173 | None:intergenic | 40.0% |
| TGGTGTTTGGTTGTAATAGG+AGG | + | chr2_4:60055556-60055575 | None:intergenic | 40.0% | |
| GAGATTGAGCTACTTGATGA+AGG | + | chr2_4:60055624-60055643 | None:intergenic | 40.0% | |
| TGAGTAAGGACTCTTGGTTA+TGG | + | chr2_4:60055659-60055678 | None:intergenic | 40.0% | |
| AACCAAGAGTCCTTACTCAA+TGG | - | chr2_4:60055660-60055679 | Msa0339120:intron | 40.0% | |
| AACCATTGAGTAAGGACTCT+TGG | + | chr2_4:60055665-60055684 | None:intergenic | 40.0% | |
| TCTTGTCATGTTTGGAAGTG+AGG | - | chr2_4:60055749-60055768 | Msa0339120:CDS | 40.0% | |
| CTTGTCATGTTTGGAAGTGA+GGG | - | chr2_4:60055750-60055769 | Msa0339120:CDS | 40.0% | |
| AGTTGTTGCAGTTCATCTGA+TGG | - | chr2_4:60055774-60055793 | Msa0339120:CDS | 40.0% | |
| AGTTCATCTGATGGAAGTCT+TGG | - | chr2_4:60055783-60055802 | Msa0339120:CDS | 40.0% | |
| GTTCATCTGATGGAAGTCTT+GGG | - | chr2_4:60055784-60055803 | Msa0339120:CDS | 40.0% | |
| ! | TCACCTTTTCTCTTTCCCAT+TGG | + | chr2_4:60055896-60055915 | None:intergenic | 40.0% |
| ACATTTGCTTTGTCACAGCA+AGG | + | chr2_4:60054679-60054698 | None:intergenic | 40.0% | |
| CAAATGTGAAGAAAGGACCA+TGG | - | chr2_4:60054692-60054711 | Msa0339120:CDS | 40.0% | |
| AACATGGAACTGGTGGAAAT+TGG | - | chr2_4:60054755-60054774 | Msa0339120:CDS | 40.0% | |
| !! | AACGCCAATATTTCTGGATC+TGG | + | chr2_4:60055154-60055173 | None:intergenic | 40.0% |
| TGGTGTTTGGTTGTAATAGG+AGG | + | chr2_4:60055556-60055575 | None:intergenic | 40.0% | |
| GAGATTGAGCTACTTGATGA+AGG | + | chr2_4:60055624-60055643 | None:intergenic | 40.0% | |
| TGAGTAAGGACTCTTGGTTA+TGG | + | chr2_4:60055659-60055678 | None:intergenic | 40.0% | |
| AACCAAGAGTCCTTACTCAA+TGG | - | chr2_4:60055660-60055679 | Msa0339120:intron | 40.0% | |
| AACCATTGAGTAAGGACTCT+TGG | + | chr2_4:60055665-60055684 | None:intergenic | 40.0% | |
| TCTTGTCATGTTTGGAAGTG+AGG | - | chr2_4:60055749-60055768 | Msa0339120:CDS | 40.0% | |
| CTTGTCATGTTTGGAAGTGA+GGG | - | chr2_4:60055750-60055769 | Msa0339120:CDS | 40.0% | |
| AGTTGTTGCAGTTCATCTGA+TGG | - | chr2_4:60055774-60055793 | Msa0339120:CDS | 40.0% | |
| AGTTCATCTGATGGAAGTCT+TGG | - | chr2_4:60055783-60055802 | Msa0339120:CDS | 40.0% | |
| GTTCATCTGATGGAAGTCTT+GGG | - | chr2_4:60055784-60055803 | Msa0339120:CDS | 40.0% | |
| ! | TCACCTTTTCTCTTTCCCAT+TGG | + | chr2_4:60055896-60055915 | None:intergenic | 40.0% |
| ! | GTATCTTCTTCTGGAGACCA+TGG | + | chr2_4:60054712-60054731 | None:intergenic | 45.0% |
| ! | ATAGGAGGTGCAATGAGAAG+AGG | + | chr2_4:60055541-60055560 | None:intergenic | 45.0% |
| ! | GTATCTTCTTCTGGAGACCA+TGG | + | chr2_4:60054712-60054731 | None:intergenic | 45.0% |
| ! | ATAGGAGGTGCAATGAGAAG+AGG | + | chr2_4:60055541-60055560 | None:intergenic | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 60054664 | 60056088 | 60054664 | ID=Msa0339120;Name=Msa0339120 |
| chr2_4 | mRNA | 60054664 | 60056088 | 60054664 | ID=Msa0339120-mRNA-1;Parent=Msa0339120;Name=Msa0339120-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|1|0.33|1|1|1|3|0|315 |
| chr2_4 | exon | 60055953 | 60056088 | 60055953 | ID=Msa0339120-mRNA-1:exon:18660;Parent=Msa0339120-mRNA-1 |
| chr2_4 | exon | 60055735 | 60055864 | 60055735 | ID=Msa0339120-mRNA-1:exon:18659;Parent=Msa0339120-mRNA-1 |
| chr2_4 | exon | 60054664 | 60055345 | 60054664 | ID=Msa0339120-mRNA-1:exon:18658;Parent=Msa0339120-mRNA-1 |
| chr2_4 | CDS | 60055953 | 60056088 | 60055953 | ID=Msa0339120-mRNA-1:cds;Parent=Msa0339120-mRNA-1 |
| chr2_4 | CDS | 60055735 | 60055864 | 60055735 | ID=Msa0339120-mRNA-1:cds;Parent=Msa0339120-mRNA-1 |
| chr2_4 | CDS | 60054664 | 60055345 | 60054664 | ID=Msa0339120-mRNA-1:cds;Parent=Msa0339120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
