Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346500 | KEH33767.1 | 77.027 | 74 | 17 | 0 | 60 | 133 | 4 | 77 | 1.90e-32 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346500 | A0A072UVY7 | 77.027 | 74 | 17 | 0 | 60 | 133 | 4 | 77 | 9.07e-33 | 123 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0346480 | Msa0346500 | 0.894304 | 2.797308e-75 | -8.615850e-47 |
| Msa0346500 | Msa0451570 | 0.821643 | 3.619656e-53 | -8.615850e-47 |
| Msa0346500 | Msa0499410 | 0.897058 | 2.030318e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346500 | MtrunA17_Chr3g0097121 | 82.353 | 68 | 12 | 0 | 66 | 133 | 1 | 68 | 9.98e-36 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 212 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATCCAACTTTGATATTAT+TGG | 0.113170 | 3_1:+7042634 | None:intergenic |
| TAAGAATATATGTTTGGTTT+TGG | 0.238280 | 3_1:-7042873 | Msa0346500:three_prime_UTR |
| CTATGAACAATGCTGATTTA+AGG | 0.251889 | 3_1:-7040230 | Msa0346500:three_prime_UTR |
| TGCCTAATGGTGAGGGATTA+AGG | 0.257367 | 3_1:-7046761 | Msa0346500:CDS |
| CGTGCGTTACAGCTAGCTTT+AGG | 0.262590 | 3_1:+7042249 | None:intergenic |
| TTCAACGGTCTCAAATCTTT+TGG | 0.264016 | 3_1:+7046487 | None:intergenic |
| GATTATGTCCTGGTGCTTGC+AGG | 0.264324 | 3_1:+7042184 | None:intergenic |
| GTTCCCAAAGTGTTCATTCT+TGG | 0.270363 | 3_1:+7044070 | None:intergenic |
| CATGGAAATTTCGAAGATTC+TGG | 0.281014 | 3_1:-7046694 | Msa0346500:CDS |
| CACTGGACTCTCTTCCTAAC+TGG | 0.283570 | 3_1:+7040171 | None:intergenic |
| GATTTCTACAACATTGATAT+TGG | 0.285700 | 3_1:-7042726 | Msa0346500:three_prime_UTR |
| GTGCGTTACAGCTAGCTTTA+GGG | 0.286663 | 3_1:+7042250 | None:intergenic |
| AAAAGAAATTGTAAAATATT+CGG | 0.289786 | 3_1:+7039938 | None:intergenic |
| TAGATCAGCAAGGATATATT+TGG | 0.290921 | 3_1:-7040449 | Msa0346500:three_prime_UTR |
| CATCAAACCTATTTGTTCAT+AGG | 0.290954 | 3_1:+7042686 | None:intergenic |
| ACTCTTACCTATGAACAAAT+AGG | 0.305163 | 3_1:-7042693 | Msa0346500:three_prime_UTR |
| TGCACACGTTTCTTATGGTT+GGG | 0.310652 | 3_1:-7044277 | Msa0346500:three_prime_UTR |
| CAAGAACATGTTCGAGGTTA+AGG | 0.317039 | 3_1:-7040914 | Msa0346500:three_prime_UTR |
| TACTCTATTGTTTGTTCAAA+TGG | 0.318581 | 3_1:-7047032 | Msa0346500:CDS |
| AATTGTGCACACGTTTCTTA+TGG | 0.320127 | 3_1:-7044282 | Msa0346500:three_prime_UTR |
| ATAGGAGGAAGACATTTATT+AGG | 0.322174 | 3_1:+7040747 | None:intergenic |
| TGCACACGTTTCCTATGGTT+GGG | 0.323318 | 3_1:-7044402 | Msa0346500:CDS |
| AGATTTGAGACCGTTGAAAA+AGG | 0.326177 | 3_1:-7046482 | Msa0346500:intron |
| ACCTCTACCTCATTATTTCA+TGG | 0.328045 | 3_1:+7042807 | None:intergenic |
| CAGATCATGTGCTATGGCCT+TGG | 0.337263 | 3_1:-7044470 | Msa0346500:CDS |
| GTAACAAACGTGAATGAATC+AGG | 0.345317 | 3_1:+7047052 | None:intergenic |
| TTGTCACTGATACAAATAGA+TGG | 0.346004 | 3_1:-7042916 | Msa0346500:three_prime_UTR |
| GGAATGGCATTCTTCATATA+AGG | 0.346620 | 3_1:-7040293 | Msa0346500:three_prime_UTR |
| CAGAGGCGTTAGGAAGGATT+TGG | 0.349208 | 3_1:-7043361 | Msa0346500:three_prime_UTR |
| GGATAGGGTTTAATTGGCCT+TGG | 0.350161 | 3_1:-7040852 | Msa0346500:three_prime_UTR |
| GATCAAAGTCGTTGATTACT+TGG | 0.353170 | 3_1:-7042387 | Msa0346500:three_prime_UTR |
| AAAATGGCAAGGTGTACTTC+AGG | 0.354841 | 3_1:-7040882 | Msa0346500:three_prime_UTR |
| GAATGGGTGGTTTGGCTTGA+AGG | 0.358568 | 3_1:-7042748 | Msa0346500:three_prime_UTR |
| ACCTCGAACATGTTCTTGTT+AGG | 0.359147 | 3_1:+7040919 | None:intergenic |
| GTTTAATTGGCCTTGGTGCA+TGG | 0.359621 | 3_1:-7040845 | Msa0346500:three_prime_UTR |
| GTGTGATATGGTATTCATTA+TGG | 0.361317 | 3_1:-7040424 | Msa0346500:three_prime_UTR |
| ATGGTTGGATAGGGTTTAAT+TGG | 0.364384 | 3_1:-7040858 | Msa0346500:three_prime_UTR |
| GAGAAATTTCATCTGCTATA+CGG | 0.365583 | 3_1:+7042007 | None:intergenic |
| TTGATCTCAGTTTCCTTAGT+TGG | 0.368759 | 3_1:+7042404 | None:intergenic |
| TGCCTAGATGCTGCTGAGGC+AGG | 0.370072 | 3_1:-7042140 | Msa0346500:three_prime_UTR |
| AAATAATGAGGTAGAGGTTC+AGG | 0.370513 | 3_1:-7042802 | Msa0346500:three_prime_UTR |
| GTGCTATGGCCTTGGGAGTC+AGG | 0.371801 | 3_1:-7044462 | Msa0346500:CDS |
| TGACATCGACTCTGGATATC+TGG | 0.373468 | 3_1:-7040646 | Msa0346500:three_prime_UTR |
| ATGCATTAAGAATATATGTT+TGG | 0.381852 | 3_1:-7042879 | Msa0346500:three_prime_UTR |
| CCTGGTGCTTGCAGGGAATA+GGG | 0.384926 | 3_1:+7042192 | None:intergenic |
| TTCTTCAAGAATGGGTGGTT+TGG | 0.386728 | 3_1:-7042756 | Msa0346500:three_prime_UTR |
| AACAAAGTATTCTTCAAGAA+TGG | 0.387611 | 3_1:-7042765 | Msa0346500:three_prime_UTR |
| GTTTGGTTATCATGCAGAAT+TGG | 0.387820 | 3_1:-7040033 | Msa0346500:three_prime_UTR |
| GGAGTGATCATCTTTGATAT+AGG | 0.388625 | 3_1:+7040729 | None:intergenic |
| TTCAAAATCGGAGGTGGGTG+GGG | 0.397294 | 3_1:-7042311 | Msa0346500:three_prime_UTR |
| ATTATTGGAGGAGTGCAATC+AGG | 0.401066 | 3_1:+7042649 | None:intergenic |
| CATCCACTTGGCACAATGTA+TGG | 0.403417 | 3_1:-7044355 | Msa0346500:three_prime_UTR |
| AATGATGCTTGCTTGCTTGA+AGG | 0.404969 | 3_1:-7044319 | Msa0346500:three_prime_UTR |
| ATATATTTGGCAGTGTGATA+TGG | 0.407451 | 3_1:-7040436 | Msa0346500:three_prime_UTR |
| AGATCATGTGCTATGGCCTT+GGG | 0.409945 | 3_1:-7044469 | Msa0346500:CDS |
| GCCACTGCAGGCCTTTGCCT+TGG | 0.411177 | 3_1:-7042451 | Msa0346500:intron |
| CAACATTGATATTGGTGCTT+GGG | 0.414236 | 3_1:-7042718 | Msa0346500:three_prime_UTR |
| TCAGGTTGCTTCTTGCTTGA+AGG | 0.415111 | 3_1:-7044444 | Msa0346500:CDS |
| TTTGAAGGATTGGAGGTGAC+TGG | 0.416212 | 3_1:-7040386 | Msa0346500:three_prime_UTR |
| GTGCACACGTTTCTTATGGT+TGG | 0.417559 | 3_1:-7044278 | Msa0346500:three_prime_UTR |
| AATGAATTGGTGTTCAAAAT+CGG | 0.418504 | 3_1:-7042323 | Msa0346500:three_prime_UTR |
| TTTATGTCAATGTAGTTCAT+TGG | 0.422189 | 3_1:-7042608 | Msa0346500:three_prime_UTR |
| TCCTGGTGCTTGCAGGGAAT+AGG | 0.422432 | 3_1:+7042191 | None:intergenic |
| TTGCTTGGAAGTGCTCATTT+CGG | 0.424691 | 3_1:-7042361 | Msa0346500:three_prime_UTR |
| AAAGTGTTCATTCTTGGCTC+TGG | 0.430729 | 3_1:+7044076 | None:intergenic |
| GTGCACACGTTTCCTATGGT+TGG | 0.431910 | 3_1:-7044403 | Msa0346500:CDS |
| TTTAATTGGCCTTGGTGCAT+GGG | 0.432661 | 3_1:-7040844 | Msa0346500:three_prime_UTR |
| TCCTCCAATAATATCAAAGT+TGG | 0.433629 | 3_1:-7042638 | Msa0346500:three_prime_UTR |
| TACTTCAGGGATGGTTGGAT+AGG | 0.436595 | 3_1:-7040868 | Msa0346500:three_prime_UTR |
| CTTATGTGCAGCGCGTAACT+TGG | 0.437374 | 3_1:-7040358 | Msa0346500:three_prime_UTR |
| GGTTTCTGCGTGTCTTGGTT+TGG | 0.437549 | 3_1:-7040519 | Msa0346500:intron |
| GATAGCTGAATCACATTTGT+CGG | 0.439369 | 3_1:+7040477 | None:intergenic |
| CTCCTTAATCCCTCACCATT+AGG | 0.442519 | 3_1:+7046759 | None:intergenic |
| TGCACACAACGGTATGTTTG+AGG | 0.443354 | 3_1:-7047119 | Msa0346500:CDS |
| TCCTATGGTTGGGGTAATGA+TGG | 0.447462 | 3_1:-7044392 | Msa0346500:CDS |
| ACTTCTCGCAGTGCCCAGTT+AGG | 0.447865 | 3_1:-7040185 | Msa0346500:three_prime_UTR |
| ATCACCATGCTGCCATCATT+TGG | 0.451917 | 3_1:+7040708 | None:intergenic |
| TCAGAGTGCATTGCCAACTA+AGG | 0.455280 | 3_1:-7042417 | Msa0346500:three_prime_UTR |
| GCCTAGATGCTGCTGAGGCA+GGG | 0.460290 | 3_1:-7042139 | Msa0346500:three_prime_UTR |
| TGAAACCAAATAAAATTACT+TGG | 0.461663 | 3_1:-7046851 | Msa0346500:CDS |
| ATGTATAATTAAAGAGCAAA+TGG | 0.464309 | 3_1:-7039810 | Msa0346500:three_prime_UTR |
| TGCAGGCCTTTGCCTTGGTT+AGG | 0.464944 | 3_1:-7042446 | Msa0346500:intron |
| GGTTTGGTTTCTGCGTGTCT+TGG | 0.466162 | 3_1:-7040524 | Msa0346500:intron |
| ACAAAGTATTCTTCAAGAAT+GGG | 0.467715 | 3_1:-7042764 | Msa0346500:three_prime_UTR |
| ACAACATTGATATTGGTGCT+TGG | 0.474591 | 3_1:-7042719 | Msa0346500:three_prime_UTR |
| TCTTATGGTTGGGGTAATGA+TGG | 0.478616 | 3_1:-7044267 | Msa0346500:three_prime_UTR |
| TTGATTACTTGGGATTTGCT+TGG | 0.481601 | 3_1:-7042376 | Msa0346500:three_prime_UTR |
| AATTGTGCACACGTTTCCTA+TGG | 0.481870 | 3_1:-7044407 | Msa0346500:CDS |
| CTGGGCACTGCGAGAAGTAA+TGG | 0.484915 | 3_1:+7040190 | None:intergenic |
| GATCTCAAGCTCCACGTAGT+AGG | 0.487112 | 3_1:+7041960 | None:intergenic |
| ACTTCAGGGATGGTTGGATA+GGG | 0.487995 | 3_1:-7040867 | Msa0346500:three_prime_UTR |
| CAGAATCTTCGAAATTTCCA+TGG | 0.491616 | 3_1:+7046695 | None:intergenic |
| TGATTTAAGGCATGTGTACC+AGG | 0.493796 | 3_1:-7040217 | Msa0346500:three_prime_UTR |
| AGGGAATAGGGACATGCCTC+AGG | 0.494745 | 3_1:+7042204 | None:intergenic |
| CCCTATTCCCTGCAAGCACC+AGG | 0.497957 | 3_1:-7042192 | Msa0346500:three_prime_UTR |
| GTTCAAAATCGGAGGTGGGT+GGG | 0.498607 | 3_1:-7042312 | Msa0346500:three_prime_UTR |
| GCAAACACTAAATTGCCTAA+TGG | 0.498664 | 3_1:-7046774 | Msa0346500:CDS |
| TCCAACTTTGATATTATTGG+AGG | 0.498883 | 3_1:+7042637 | None:intergenic |
| CCATGGGCTTGATTATGTCC+TGG | 0.501232 | 3_1:+7042174 | None:intergenic |
| AGACAGATCAGGAGTGGAAG+TGG | 0.502826 | 3_1:-7040775 | Msa0346500:three_prime_UTR |
| CACATTATTGCAAAGCCCAC+TGG | 0.502855 | 3_1:+7040154 | None:intergenic |
| CATAAGGTTTGATTCTACAT+AGG | 0.503823 | 3_1:+7040812 | None:intergenic |
| GAGCCAAGAATGAACACTTT+GGG | 0.504993 | 3_1:-7044073 | Msa0346500:three_prime_UTR |
| AGAGCCAAGAATGAACACTT+TGG | 0.505329 | 3_1:-7044074 | Msa0346500:three_prime_UTR |
| ACATCTTCTGACATCGACTC+TGG | 0.507031 | 3_1:-7040654 | Msa0346500:three_prime_UTR |
| TGTCGAGGCAGAAAATGAAT+TGG | 0.513746 | 3_1:-7042336 | Msa0346500:three_prime_UTR |
| GGCCTCCTTCCTTTCATCCG+TGG | 0.514138 | 3_1:+7046508 | None:intergenic |
| GCACACGTTTCTTATGGTTG+GGG | 0.514535 | 3_1:-7044276 | Msa0346500:three_prime_UTR |
| GGGAGATTGACAGAGGCGTT+AGG | 0.515400 | 3_1:-7043371 | Msa0346500:three_prime_UTR |
| GATTCTGGACAGACCAGAGC+TGG | 0.516761 | 3_1:-7046679 | Msa0346500:CDS |
| ATATCGCACCAGCAGCTTCA+CGG | 0.517086 | 3_1:+7044027 | None:intergenic |
| ACTGCATCTGATGTTAACTC+TGG | 0.517762 | 3_1:-7042556 | Msa0346500:three_prime_UTR |
| AAGATGATCACTCCAAATGA+TGG | 0.517981 | 3_1:-7040720 | Msa0346500:three_prime_UTR |
| GAAACCAAATAAAATTACTT+GGG | 0.518117 | 3_1:-7046850 | Msa0346500:CDS |
| ACCCTGCCTCAGCAGCATCT+AGG | 0.519643 | 3_1:+7042138 | None:intergenic |
| ATCAAAGTCGTTGATTACTT+GGG | 0.521003 | 3_1:-7042386 | Msa0346500:three_prime_UTR |
| TACCACACTAGTTCCAGCTC+TGG | 0.523565 | 3_1:+7046666 | None:intergenic |
| TTACAGCTAGCTTTAGGGGA+TGG | 0.523709 | 3_1:+7042255 | None:intergenic |
| CACTAAATTGCCTAATGGTG+AGG | 0.524531 | 3_1:-7046769 | Msa0346500:CDS |
| ATTATGTCCTGGTGCTTGCA+GGG | 0.524628 | 3_1:+7042185 | None:intergenic |
| CCTTTATGAATGCACTGAAA+AGG | 0.524954 | 3_1:+7040264 | None:intergenic |
| GTTGCTTTCGTGTGTTGACA+TGG | 0.526458 | 3_1:-7046823 | Msa0346500:CDS |
| GGCATGAACTGACCATCACT+CGG | 0.526907 | 3_1:+7046529 | None:intergenic |
| GCACACGTTTCCTATGGTTG+GGG | 0.527316 | 3_1:-7044401 | Msa0346500:CDS |
| AATGGTGGATGCTTCTTCGA+AGG | 0.527573 | 3_1:-7047014 | Msa0346500:intron |
| TAATGTATGTTTGTGTGTCA+TGG | 0.533597 | 3_1:-7040009 | Msa0346500:three_prime_UTR |
| CAGTTCATGCCACGGATGAA+AGG | 0.533808 | 3_1:-7046517 | Msa0346500:CDS |
| GATCTCTTTGCAAGGCGCGT+AGG | 0.536164 | 3_1:-7042289 | Msa0346500:three_prime_UTR |
| GCCCTTCAGATCATGTGCTA+TGG | 0.544681 | 3_1:-7044476 | Msa0346500:intron |
| TCTATTGTTTGTTCAAATGG+TGG | 0.550094 | 3_1:-7047029 | Msa0346500:CDS |
| TAAAAGATTGAATAAGATGA+CGG | 0.550132 | 3_1:+7039891 | None:intergenic |
| AAATGGCAAGGTGTACTTCA+GGG | 0.550577 | 3_1:-7040881 | Msa0346500:three_prime_UTR |
| TCAGTGACAAAGTAAGTAGC+AGG | 0.550842 | 3_1:+7042929 | None:intergenic |
| CAGTTCAAGGCAATGCTGGT+GGG | 0.551373 | 3_1:-7043392 | Msa0346500:three_prime_UTR |
| TCAACAGTTCAAGGCAATGC+TGG | 0.551498 | 3_1:-7043396 | Msa0346500:intron |
| ATGACCATAAAAGACAGATC+AGG | 0.552829 | 3_1:-7040786 | Msa0346500:three_prime_UTR |
| ACTGGACTCTCTTCCTAACT+GGG | 0.553386 | 3_1:+7040172 | None:intergenic |
| AGTTCAAGGCAATGCTGGTG+GGG | 0.555031 | 3_1:-7043391 | Msa0346500:three_prime_UTR |
| GCAATCCTTTCCCCGAGTGA+TGG | 0.556379 | 3_1:-7046541 | Msa0346500:CDS |
| GATGTAGATTAATGATCACT+TGG | 0.558713 | 3_1:-7042953 | Msa0346500:intron |
| ACTAAATTGCCTAATGGTGA+GGG | 0.565960 | 3_1:-7046768 | Msa0346500:CDS |
| TGTCACTGATACAAATAGAT+GGG | 0.566640 | 3_1:-7042915 | Msa0346500:three_prime_UTR |
| TCCATGAAATAATGAGGTAG+AGG | 0.567975 | 3_1:-7042808 | Msa0346500:three_prime_UTR |
| ACAGTTCAAGGCAATGCTGG+TGG | 0.568317 | 3_1:-7043393 | Msa0346500:intron |
| GTCAAGGACCGTGAAGCTGC+TGG | 0.569242 | 3_1:-7044035 | Msa0346500:three_prime_UTR |
| AGGTGTACTTCAGGGATGGT+TGG | 0.569785 | 3_1:-7040873 | Msa0346500:three_prime_UTR |
| TTGCTGTCACCGAAAATACA+AGG | 0.570074 | 3_1:-7040314 | Msa0346500:three_prime_UTR |
| TGCGTTACAGCTAGCTTTAG+GGG | 0.570487 | 3_1:+7042251 | None:intergenic |
| GATTGACAGAGGCGTTAGGA+AGG | 0.571222 | 3_1:-7043367 | Msa0346500:three_prime_UTR |
| TGTTCAAAATCGGAGGTGGG+TGG | 0.571285 | 3_1:-7042313 | Msa0346500:three_prime_UTR |
| GTGATCATCTTTGATATAGG+AGG | 0.572297 | 3_1:+7040732 | None:intergenic |
| TCCTAACAAGAACATGTTCG+AGG | 0.576589 | 3_1:-7040920 | Msa0346500:three_prime_UTR |
| TTGCTTGAAGGAAATCTGCA+TGG | 0.578808 | 3_1:-7044432 | Msa0346500:CDS |
| TTTGTCTGTCTATTTAAGTG+AGG | 0.579958 | 3_1:-7044148 | Msa0346500:three_prime_UTR |
| AAGTATTCTTCAAGAATGGG+TGG | 0.580631 | 3_1:-7042761 | Msa0346500:three_prime_UTR |
| GATTGCGCAACATATATCGC+AGG | 0.585465 | 3_1:-7046737 | Msa0346500:CDS |
| TCATGCCACGGATGAAAGGA+AGG | 0.587608 | 3_1:-7046513 | Msa0346500:CDS |
| ACTGACCATCACTCGGGGAA+AGG | 0.587693 | 3_1:+7046536 | None:intergenic |
| CTGGTAGAAAACACGAAATG+TGG | 0.592821 | 3_1:+7044095 | None:intergenic |
| TAACAAACGTGAATGAATCA+GGG | 0.593003 | 3_1:+7047053 | None:intergenic |
| TTGGTGTTCAAAATCGGAGG+TGG | 0.594982 | 3_1:-7042317 | Msa0346500:three_prime_UTR |
| GTCACCGAAAATACAAGGAA+TGG | 0.598252 | 3_1:-7040309 | Msa0346500:three_prime_UTR |
| CATACATTGTGCCAAGTGGA+TGG | 0.599109 | 3_1:+7044356 | None:intergenic |
| GCATGAACTGACCATCACTC+GGG | 0.599634 | 3_1:+7046530 | None:intergenic |
| GAACTTTACTATGTGTGTCA+AGG | 0.604975 | 3_1:-7044051 | Msa0346500:three_prime_UTR |
| CAAACATTATGCCAAGTGGA+TGG | 0.605109 | 3_1:+7044231 | None:intergenic |
| GGCAAGGTGTACTTCAGGGA+TGG | 0.605709 | 3_1:-7040877 | Msa0346500:three_prime_UTR |
| CCAGGACATAATCAAGCCCA+TGG | 0.607425 | 3_1:-7042174 | Msa0346500:three_prime_UTR |
| GAAATGTGGTTGATGTCTTG+TGG | 0.607741 | 3_1:+7044109 | None:intergenic |
| TGGGTGGGGATCTCTTTGCA+AGG | 0.608753 | 3_1:-7042297 | Msa0346500:three_prime_UTR |
| TATAATTAAAGAGCAAATGG+TGG | 0.609006 | 3_1:-7039807 | Msa0346500:three_prime_UTR |
| AAGAAGCAACCTGACTCCCA+AGG | 0.609216 | 3_1:+7044453 | None:intergenic |
| CATAAAAGACAGATCAGGAG+TGG | 0.611114 | 3_1:-7040781 | Msa0346500:three_prime_UTR |
| ATGAACAAATAGGTTTGATG+AGG | 0.613403 | 3_1:-7042683 | Msa0346500:three_prime_UTR |
| CACTCCAAATGATGGCAGCA+TGG | 0.614842 | 3_1:-7040712 | Msa0346500:three_prime_UTR |
| GCGAGAAGTAATGGTTAACC+TGG | 0.615011 | 3_1:+7040199 | None:intergenic |
| TTATTGGAGGAGTGCAATCA+GGG | 0.618566 | 3_1:+7042650 | None:intergenic |
| ATAATATCAAAGTTGGATCG+TGG | 0.620698 | 3_1:-7042631 | Msa0346500:three_prime_UTR |
| AGTTAGGAAGAGAGTCCAGT+GGG | 0.621104 | 3_1:-7040169 | Msa0346500:three_prime_UTR |
| GTTGCAAGTAACCATCCACT+TGG | 0.621774 | 3_1:-7044242 | Msa0346500:three_prime_UTR |
| AGTTTGCCTAGATGCTGCTG+AGG | 0.622272 | 3_1:-7042144 | Msa0346500:three_prime_UTR |
| GCAGCGCGTAACTTGGTCAA+AGG | 0.623770 | 3_1:-7040351 | Msa0346500:three_prime_UTR |
| TATGTCGTACTCCATGTGAA+AGG | 0.628216 | 3_1:+7043326 | None:intergenic |
| ATACCATACATTGTGCCAAG+TGG | 0.628611 | 3_1:+7044352 | None:intergenic |
| TGGTGTTCAAAATCGGAGGT+GGG | 0.630322 | 3_1:-7042316 | Msa0346500:three_prime_UTR |
| GCTGCAAATAACCATCCACT+TGG | 0.630573 | 3_1:-7044367 | Msa0346500:exon |
| GTGCTCATTTCGGATTGTCG+AGG | 0.634872 | 3_1:-7042351 | Msa0346500:three_prime_UTR |
| TAACTTTCGAACCTTTCACA+TGG | 0.635597 | 3_1:-7043337 | Msa0346500:three_prime_UTR |
| AAACCAAATAAAATTACTTG+GGG | 0.636802 | 3_1:-7046849 | Msa0346500:CDS |
| AAGAAGCCATATATAAAACA+TGG | 0.639660 | 3_1:+7040065 | None:intergenic |
| CAAAATCCTAACCAAGGCAA+AGG | 0.639704 | 3_1:+7042440 | None:intergenic |
| ATAATGTGTGCTAGAAGACA+TGG | 0.641736 | 3_1:-7040139 | Msa0346500:three_prime_UTR |
| ATAGCAAACATTATGCCAAG+TGG | 0.643312 | 3_1:+7044227 | None:intergenic |
| TTGCTTGAAGGAAATCTGCA+TGG | 0.646719 | 3_1:-7044307 | Msa0346500:three_prime_UTR |
| ACCATCATTACCCCAACCAT+AGG | 0.648112 | 3_1:+7044391 | None:intergenic |
| GTGATGGTCAGTTCATGCCA+CGG | 0.650338 | 3_1:-7046525 | Msa0346500:CDS |
| GAATTGGTGTTCAAAATCGG+AGG | 0.651998 | 3_1:-7042320 | Msa0346500:three_prime_UTR |
| CTCTGACAAAATCCTAACCA+AGG | 0.653052 | 3_1:+7042434 | None:intergenic |
| GGTGCGATATGTTTGATGAA+AGG | 0.666358 | 3_1:-7044014 | Msa0346500:intron |
| ATGTGATCCATGAAATAATG+AGG | 0.668907 | 3_1:-7042814 | Msa0346500:three_prime_UTR |
| CAGTTAGGAAGAGAGTCCAG+TGG | 0.670342 | 3_1:-7040170 | Msa0346500:three_prime_UTR |
| AACAAACGTGAATGAATCAG+GGG | 0.687019 | 3_1:+7047054 | None:intergenic |
| TAATGCTGACCCATGCACCA+AGG | 0.690450 | 3_1:+7040835 | None:intergenic |
| CATGAACTGACCATCACTCG+GGG | 0.698036 | 3_1:+7046531 | None:intergenic |
| CTATCTATCATAGATCAGCA+AGG | 0.700041 | 3_1:-7040459 | Msa0346500:three_prime_UTR |
| GTCTTGGTTTGGTTTCTGCG+AGG | 0.705885 | 3_1:-7040508 | Msa0346500:three_prime_UTR |
| TGCCACGGATGAAAGGAAGG+AGG | 0.706826 | 3_1:-7046510 | Msa0346500:CDS |
| AAAGCTAGCTGTAACGCACG+AGG | 0.709573 | 3_1:-7042246 | Msa0346500:three_prime_UTR |
| GCTGGTGGGGAGATTGACAG+AGG | 0.714727 | 3_1:-7043378 | Msa0346500:three_prime_UTR |
| AGAACAAAGATGTCTACCTG+AGG | 0.724200 | 3_1:-7042220 | Msa0346500:three_prime_UTR |
| AAAGTTGAATACCTACTACG+TGG | 0.752448 | 3_1:-7041971 | Msa0346500:three_prime_UTR |
| TATTCCTTAGCAAAACACGA+CGG | 0.776301 | 3_1:+7040979 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCTAAGATATATTTAAA+AGG | + | chr3_1:7041257-7041276 | None:intergenic | 10.0% |
| !!! | TAGATTAATTAGATTATTTT+TGG | - | chr3_1:7041270-7041289 | Msa0346500:intron | 10.0% |
| !! | ATATAATCAAACAATATAAA+AGG | + | chr3_1:7044442-7044461 | None:intergenic | 10.0% |
| !! | AAAAGAAATTGTAAAATATT+CGG | + | chr3_1:7047023-7047042 | None:intergenic | 10.0% |
| !!! | TTACAATTTCTTTTAAATTA+AGG | - | chr3_1:7047029-7047048 | Msa0346500:CDS | 10.0% |
| !! | TTTATGTGCATATTATTATT+AGG | + | chr3_1:7040368-7040387 | None:intergenic | 15.0% |
| !!! | TTTTTCTAATTTTTTAGTAG+TGG | - | chr3_1:7040592-7040611 | Msa0346500:intron | 15.0% |
| !!! | TTTTATAATATTAAGATCCA+TGG | + | chr3_1:7042346-7042365 | None:intergenic | 15.0% |
| !! | TTGTTTAATACATTAACATA+TGG | - | chr3_1:7043337-7043356 | Msa0346500:three_prime_UTR | 15.0% |
| !! | CAAATAAGAATAAAAACTAA+CGG | + | chr3_1:7043524-7043543 | None:intergenic | 15.0% |
| !!! | AAATTTTTTGTTAACATGAA+TGG | - | chr3_1:7043794-7043813 | Msa0346500:intron | 15.0% |
| !!! | AATTTTTTGTTAACATGAAT+GGG | - | chr3_1:7043795-7043814 | Msa0346500:intron | 15.0% |
| !! | AGAAATCAGTTTATAAATTA+TGG | + | chr3_1:7045271-7045290 | None:intergenic | 15.0% |
| !!! | ATAATTTATAAACTGATTTC+TGG | - | chr3_1:7045270-7045289 | Msa0346500:intron | 15.0% |
| !!! | ATTTTATAAAAACTAATGTG+CGG | - | chr3_1:7045465-7045484 | Msa0346500:intron | 15.0% |
| !! | TTAAAATCATATCCAAAATA+AGG | + | chr3_1:7045656-7045675 | None:intergenic | 15.0% |
| !!! | AACTTACTTATTTTTGAAAT+AGG | - | chr3_1:7045674-7045693 | Msa0346500:intron | 15.0% |
| !!! | ATATTTTAGAATCTTGATTA+TGG | - | chr3_1:7046367-7046386 | Msa0346500:intron | 15.0% |
| !! | TGAAACCAAATAAAATTACT+TGG | - | chr3_1:7040107-7040126 | Msa0346500:three_prime_UTR | 20.0% |
| !! | GAAACCAAATAAAATTACTT+GGG | - | chr3_1:7040108-7040127 | Msa0346500:three_prime_UTR | 20.0% |
| !! | AAACCAAATAAAATTACTTG+GGG | - | chr3_1:7040109-7040128 | Msa0346500:three_prime_UTR | 20.0% |
| !!! | AAATTTTATTCTCAACAGAT+TGG | - | chr3_1:7040386-7040405 | Msa0346500:three_prime_UTR | 20.0% |
| !!! | AATTTTATTCTCAACAGATT+GGG | - | chr3_1:7040387-7040406 | Msa0346500:three_prime_UTR | 20.0% |
| !!! | AATTTTACAATTTCATGCAA+GGG | - | chr3_1:7040544-7040563 | Msa0346500:intron | 20.0% |
| !!! | TGTTATTTAACATTAGGAAT+TGG | + | chr3_1:7040856-7040875 | None:intergenic | 20.0% |
| !!! | AACAGATGTTATTTAACATT+AGG | + | chr3_1:7040862-7040881 | None:intergenic | 20.0% |
| !! | AAGATATATTATTACTGTGT+AGG | + | chr3_1:7041399-7041418 | None:intergenic | 20.0% |
| !!! | TTTTTTCAATTTAAACCCTA+GGG | + | chr3_1:7042452-7042471 | None:intergenic | 20.0% |
| !!! | ATTTTTTCAATTTAAACCCT+AGG | + | chr3_1:7042453-7042472 | None:intergenic | 20.0% |
| !! | TTAGTGTAATACATGTATAT+TGG | - | chr3_1:7043833-7043852 | Msa0346500:intron | 20.0% |
| !! | AAACACATCATAAAAAGAAA+TGG | + | chr3_1:7043883-7043902 | None:intergenic | 20.0% |
| !!! | ATTTCTTTTTATGATGTGTT+TGG | - | chr3_1:7043882-7043901 | Msa0346500:intron | 20.0% |
| !! | CATTAATCTACATCAAATAT+GGG | + | chr3_1:7043999-7044018 | None:intergenic | 20.0% |
| !! | TCATTAATCTACATCAAATA+TGG | + | chr3_1:7044000-7044019 | None:intergenic | 20.0% |
| !! | ATGCATTAAGAATATATGTT+TGG | - | chr3_1:7044079-7044098 | Msa0346500:three_prime_UTR | 20.0% |
| !!! | TAAGAATATATGTTTGGTTT+TGG | - | chr3_1:7044085-7044104 | Msa0346500:three_prime_UTR | 20.0% |
| !! | AAATAAAATGCAAACTTCTT+TGG | + | chr3_1:7045088-7045107 | None:intergenic | 20.0% |
| !! | TTATCCTAAATAAACAAAGT+TGG | - | chr3_1:7045177-7045196 | Msa0346500:intron | 20.0% |
| !! | TATCCTAAATAAACAAAGTT+GGG | - | chr3_1:7045178-7045197 | Msa0346500:intron | 20.0% |
| !!! | ATAATTAATTAGTTTCGGAA+TGG | + | chr3_1:7045821-7045840 | None:intergenic | 20.0% |
| !! | CCTATGAATATAATATGAAA+CGG | + | chr3_1:7046344-7046363 | None:intergenic | 20.0% |
| !!! | CAGATAATACTATATTTTGA+AGG | - | chr3_1:7046557-7046576 | Msa0346500:CDS | 20.0% |
| !!! | AATACTATATTTTGAAGGAT+TGG | - | chr3_1:7046562-7046581 | Msa0346500:intron | 20.0% |
| !! | TAAAAGATTGAATAAGATGA+CGG | + | chr3_1:7047070-7047089 | None:intergenic | 20.0% |
| !! | ATGTATAATTAAAGAGCAAA+TGG | - | chr3_1:7047148-7047167 | Msa0346500:CDS | 20.0% |
| ! | TACTCTATTGTTTGTTCAAA+TGG | - | chr3_1:7039926-7039945 | Msa0346500:three_prime_UTR | 25.0% |
| !! | CAATTTTACAATTTCATGCA+AGG | - | chr3_1:7040543-7040562 | Msa0346500:intron | 25.0% |
| ! | TGAAAAAATGAATATGCTTC+TGG | + | chr3_1:7040758-7040777 | None:intergenic | 25.0% |
| !!! | TACCGGTAAATTTTTTATGT+CGG | + | chr3_1:7041202-7041221 | None:intergenic | 25.0% |
| ! | ATCCACTAACTTATTAACAT+TGG | + | chr3_1:7041301-7041320 | None:intergenic | 25.0% |
| ! | ATCCACTAACTTATTAACAT+TGG | + | chr3_1:7041301-7041320 | None:intergenic | 25.0% |
| !! | TAATAAGTTAGTGGATATGT+TGG | - | chr3_1:7041305-7041324 | Msa0346500:intron | 25.0% |
| ! | AACTTCAGTGTTAGATTATA+TGG | - | chr3_1:7041689-7041708 | Msa0346500:intron | 25.0% |
| !!! | CTGAACTATTTTCTAAAACT+CGG | + | chr3_1:7041783-7041802 | None:intergenic | 25.0% |
| !! | TGCACAAAATCTTTTTACTA+CGG | + | chr3_1:7041887-7041906 | None:intergenic | 25.0% |
| !!! | TTAGTTTTAGTTCCAGTATA+GGG | + | chr3_1:7042063-7042082 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTAGTTCCAGTAT+AGG | + | chr3_1:7042064-7042083 | None:intergenic | 25.0% |
| ! | ATACTGGAACTAAAACTAAT+TGG | - | chr3_1:7042064-7042083 | Msa0346500:intron | 25.0% |
| ! | TACTGGAACTAAAACTAATT+GGG | - | chr3_1:7042065-7042084 | Msa0346500:intron | 25.0% |
| ! | AAGTCAAATGGAAATCTAAA+TGG | + | chr3_1:7042147-7042166 | None:intergenic | 25.0% |
| !!! | ATTTGCTACATTTTCAAATC+TGG | + | chr3_1:7042231-7042250 | None:intergenic | 25.0% |
| !!! | ATACTGTATTCTTGCTTTTA+TGG | - | chr3_1:7042298-7042317 | Msa0346500:three_prime_UTR | 25.0% |
| !!! | TACTGTATTCTTGCTTTTAT+GGG | - | chr3_1:7042299-7042318 | Msa0346500:three_prime_UTR | 25.0% |
| ! | TATAATATTAAGATCCATGG+TGG | + | chr3_1:7042343-7042362 | None:intergenic | 25.0% |
| !! | TAAGAATTGCTGGTTAAATT+GGG | + | chr3_1:7042418-7042437 | None:intergenic | 25.0% |
| !! | ATAAGAATTGCTGGTTAAAT+TGG | + | chr3_1:7042419-7042438 | None:intergenic | 25.0% |
| ! | AATTTAACCAGCAATTCTTA+TGG | - | chr3_1:7042418-7042437 | Msa0346500:three_prime_UTR | 25.0% |
| ! | GGTCATATTTGAATTATCAA+TGG | + | chr3_1:7043035-7043054 | None:intergenic | 25.0% |
| !!! | TGTACTTTTTATCTCATGAA+AGG | - | chr3_1:7043105-7043124 | Msa0346500:intron | 25.0% |
| !!! | AGAAAATTGTTTTGTGAGTT+TGG | + | chr3_1:7043138-7043157 | None:intergenic | 25.0% |
| !! | AAAACAATTTTCTGCAACTT+TGG | - | chr3_1:7043145-7043164 | Msa0346500:intron | 25.0% |
| ! | ACATTAACATATGGACATTA+TGG | - | chr3_1:7043346-7043365 | Msa0346500:three_prime_UTR | 25.0% |
| ! | GAAATGGATCATACATTAAA+TGG | + | chr3_1:7043867-7043886 | None:intergenic | 25.0% |
| ! | AATAATGATCACTTTGATGT+AGG | - | chr3_1:7043945-7043964 | Msa0346500:intron | 25.0% |
| !!! | ATATATGTTTGGTTTTGGAA+AGG | - | chr3_1:7044090-7044109 | Msa0346500:three_prime_UTR | 25.0% |
| !! | AACAAAGTATTCTTCAAGAA+TGG | - | chr3_1:7044193-7044212 | Msa0346500:three_prime_UTR | 25.0% |
| !! | ACAAAGTATTCTTCAAGAAT+GGG | - | chr3_1:7044194-7044213 | Msa0346500:three_prime_UTR | 25.0% |
| ! | GATTTCTACAACATTGATAT+TGG | - | chr3_1:7044232-7044251 | Msa0346500:three_prime_UTR | 25.0% |
| ! | TTTATGTCAATGTAGTTCAT+TGG | - | chr3_1:7044350-7044369 | Msa0346500:three_prime_UTR | 25.0% |
| !! | AATGAATTGGTGTTCAAAAT+CGG | - | chr3_1:7044635-7044654 | Msa0346500:intron | 25.0% |
| !! | AACAAAACCAAATACCTTTT+GGG | + | chr3_1:7044850-7044869 | None:intergenic | 25.0% |
| !! | AAACAAAACCAAATACCTTT+TGG | + | chr3_1:7044851-7044870 | None:intergenic | 25.0% |
| !! | TATGCATTTTCTCAATTGAA+TGG | + | chr3_1:7045042-7045061 | None:intergenic | 25.0% |
| !! | ATTCCCAACTTTGTTTATTT+AGG | + | chr3_1:7045184-7045203 | None:intergenic | 25.0% |
| !! | ATTTATAAACTGATTTCTGG+AGG | - | chr3_1:7045273-7045292 | Msa0346500:intron | 25.0% |
| !! | ATTGCAGAATTTAGTTTATC+AGG | - | chr3_1:7045341-7045360 | Msa0346500:intron | 25.0% |
| !!! | TTAAGCTTTAAGTAATAGCA+GGG | + | chr3_1:7045508-7045527 | None:intergenic | 25.0% |
| ! | TGTACCATGAATAGAAATTA+AGG | + | chr3_1:7045725-7045744 | None:intergenic | 25.0% |
| !! | CTCGCATAATTAATTAGTTT+CGG | + | chr3_1:7045826-7045845 | None:intergenic | 25.0% |
| ! | TTAAGAATGCATCAGTTATA+CGG | + | chr3_1:7045895-7045914 | None:intergenic | 25.0% |
| ! | ATACATAAAAAACATGTCGT+CGG | + | chr3_1:7045937-7045956 | None:intergenic | 25.0% |
| ! | TTTATGTATATATCAGCTGA+AGG | - | chr3_1:7045948-7045967 | Msa0346500:intron | 25.0% |
| ! | CCGTTTCATATTATATTCAT+AGG | - | chr3_1:7046341-7046360 | Msa0346500:intron | 25.0% |
| ! | AAGAAGCCATATATAAAACA+TGG | + | chr3_1:7046896-7046915 | None:intergenic | 25.0% |
| !! | ATTGATGCTAAGTTTTTGTT+TGG | - | chr3_1:7046981-7047000 | Msa0346500:intron | 25.0% |
| TAACAAACGTGAATGAATCA+GGG | + | chr3_1:7039908-7039927 | None:intergenic | 30.0% | |
| TCTATTGTTTGTTCAAATGG+TGG | - | chr3_1:7039929-7039948 | Msa0346500:three_prime_UTR | 30.0% | |
| ACCAATATGGTGACTTTATT+TGG | - | chr3_1:7040028-7040047 | Msa0346500:three_prime_UTR | 30.0% | |
| ! | CCAATATGGTGACTTTATTT+GGG | - | chr3_1:7040029-7040048 | Msa0346500:three_prime_UTR | 30.0% |
| ! | CAATATGGTGACTTTATTTG+GGG | - | chr3_1:7040030-7040049 | Msa0346500:three_prime_UTR | 30.0% |
| ! | AATATGGTGACTTTATTTGG+GGG | - | chr3_1:7040031-7040050 | Msa0346500:three_prime_UTR | 30.0% |
| TATCTATCATGAAAAAGCCA+TGG | - | chr3_1:7040246-7040265 | Msa0346500:three_prime_UTR | 30.0% | |
| !! | CGCTTGATTTTGATAAATTG+TGG | - | chr3_1:7040338-7040357 | Msa0346500:three_prime_UTR | 30.0% |
| ! | TGAATATGCTTCTGGAAAAT+TGG | + | chr3_1:7040750-7040769 | None:intergenic | 30.0% |
| TTAGGAATTGGAACTATTCA+TGG | + | chr3_1:7040844-7040863 | None:intergenic | 30.0% | |
| ACACATGACAAAGAAAAAAG+TGG | + | chr3_1:7040918-7040937 | None:intergenic | 30.0% | |
| !!! | ACTTTTTTCTTTGTCATGTG+TGG | - | chr3_1:7040917-7040936 | Msa0346500:three_prime_UTR | 30.0% |
| ACAAACATGTTGCAATATCA+GGG | + | chr3_1:7041153-7041172 | None:intergenic | 30.0% | |
| !!! | TAAATTTTTTATGTCGGCAC+GGG | + | chr3_1:7041196-7041215 | None:intergenic | 30.0% |
| !!! | GTAAATTTTTTATGTCGGCA+CGG | + | chr3_1:7041197-7041216 | None:intergenic | 30.0% |
| TGCCGACATAAAAAATTTAC+CGG | - | chr3_1:7041197-7041216 | Msa0346500:intron | 30.0% | |
| GACCAATGTTAATAAGTTAG+TGG | - | chr3_1:7041296-7041315 | Msa0346500:intron | 30.0% | |
| GACCAATGTTAATAAGTTAG+TGG | - | chr3_1:7041296-7041315 | Msa0346500:intron | 30.0% | |
| TTTCACACTCAAACTATTTG+AGG | + | chr3_1:7041625-7041644 | None:intergenic | 30.0% | |
| AATGAGTATGATTGTACTTG+AGG | - | chr3_1:7041923-7041942 | Msa0346500:intron | 30.0% | |
| !!! | AGACATGTTTTTTAGAGACT+CGG | + | chr3_1:7041988-7042007 | None:intergenic | 30.0% |
| !!! | TATTGTTGTTTTCCCTATAC+TGG | - | chr3_1:7042048-7042067 | Msa0346500:intron | 30.0% |
| CACTTATGTATCAAGTCAAA+TGG | + | chr3_1:7042159-7042178 | None:intergenic | 30.0% | |
| !!! | TCACATTTACCCAGTTTTTT+TGG | - | chr3_1:7042255-7042274 | Msa0346500:three_prime_UTR | 30.0% |
| TTACCTTCACCAAAAAAACT+GGG | + | chr3_1:7042267-7042286 | None:intergenic | 30.0% | |
| TTTGTCTGTCTATTTAAGTG+AGG | - | chr3_1:7042810-7042829 | Msa0346500:three_prime_UTR | 30.0% | |
| CACAGATTTCATGATATAAG+AGG | + | chr3_1:7043205-7043224 | None:intergenic | 30.0% | |
| !! | CACTTAAGTGTTTCTGATTT+TGG | + | chr3_1:7043231-7043250 | None:intergenic | 30.0% |
| CAAAATCAGAAACACTTAAG+TGG | - | chr3_1:7043229-7043248 | Msa0346500:intron | 30.0% | |
| AAGTTTATGATATGTGCTAC+TGG | - | chr3_1:7043700-7043719 | Msa0346500:intron | 30.0% | |
| ! | TTTTTGTTAACATGAATGGG+TGG | - | chr3_1:7043798-7043817 | Msa0346500:intron | 30.0% |
| ! | TTTTGTTAACATGAATGGGT+GGG | - | chr3_1:7043799-7043818 | Msa0346500:intron | 30.0% |
| GATGTAGATTAATGATCACT+TGG | - | chr3_1:7044005-7044024 | Msa0346500:intron | 30.0% | |
| TTGTCACTGATACAAATAGA+TGG | - | chr3_1:7044042-7044061 | Msa0346500:three_prime_UTR | 30.0% | |
| TGTCACTGATACAAATAGAT+GGG | - | chr3_1:7044043-7044062 | Msa0346500:three_prime_UTR | 30.0% | |
| ATGTGATCCATGAAATAATG+AGG | - | chr3_1:7044144-7044163 | Msa0346500:three_prime_UTR | 30.0% | |
| ACTCTTACCTATGAACAAAT+AGG | - | chr3_1:7044265-7044284 | Msa0346500:three_prime_UTR | 30.0% | |
| CATCAAACCTATTTGTTCAT+AGG | + | chr3_1:7044275-7044294 | None:intergenic | 30.0% | |
| ATGAACAAATAGGTTTGATG+AGG | - | chr3_1:7044275-7044294 | Msa0346500:three_prime_UTR | 30.0% | |
| TCCTCCAATAATATCAAAGT+TGG | - | chr3_1:7044320-7044339 | Msa0346500:three_prime_UTR | 30.0% | |
| TCCAACTTTGATATTATTGG+AGG | + | chr3_1:7044324-7044343 | None:intergenic | 30.0% | |
| CGATCCAACTTTGATATTAT+TGG | + | chr3_1:7044327-7044346 | None:intergenic | 30.0% | |
| ATAATATCAAAGTTGGATCG+TGG | - | chr3_1:7044327-7044346 | Msa0346500:three_prime_UTR | 30.0% | |
| ! | TGATGTTAACTCTGGATTTT+TGG | - | chr3_1:7044410-7044429 | Msa0346500:CDS | 30.0% |
| ! | ATCAAAGTCGTTGATTACTT+GGG | - | chr3_1:7044572-7044591 | Msa0346500:intron | 30.0% |
| ! | ACAAAACCAAATACCTTTTG+GGG | + | chr3_1:7044849-7044868 | None:intergenic | 30.0% |
| GAGAAATTTCATCTGCTATA+CGG | + | chr3_1:7044954-7044973 | None:intergenic | 30.0% | |
| TATAGATGTATAGACAGTAC+TGG | - | chr3_1:7045141-7045160 | Msa0346500:intron | 30.0% | |
| TATCTTGCCTTGATTCAAAT+TGG | - | chr3_1:7045409-7045428 | Msa0346500:intron | 30.0% | |
| GATTACTCCAATTTGAATCA+AGG | + | chr3_1:7045419-7045438 | None:intergenic | 30.0% | |
| !! | CTTAAGCTTTAAGTAATAGC+AGG | + | chr3_1:7045509-7045528 | None:intergenic | 30.0% |
| !! | TGAAACAATTGATAGTGGTT+AGG | + | chr3_1:7045586-7045605 | None:intergenic | 30.0% |
| AAGCTTGAAACAATTGATAG+TGG | + | chr3_1:7045591-7045610 | None:intergenic | 30.0% | |
| ATTTCTATTCATGGTACAAG+AGG | - | chr3_1:7045727-7045746 | Msa0346500:intron | 30.0% | |
| CGAAACTAATTAATTATGCG+AGG | - | chr3_1:7045824-7045843 | Msa0346500:intron | 30.0% | |
| TAAGAATGCATCAGTTATAC+GGG | + | chr3_1:7045894-7045913 | None:intergenic | 30.0% | |
| CATAAGGTTTGATTCTACAT+AGG | + | chr3_1:7046149-7046168 | None:intergenic | 30.0% | |
| ! | CTTTTATGGTCATATGCATA+AGG | + | chr3_1:7046165-7046184 | None:intergenic | 30.0% |
| ATAGGAGGAAGACATTTATT+AGG | + | chr3_1:7046214-7046233 | None:intergenic | 30.0% | |
| ATTCCTATTCTCTTAAACAC+AGG | - | chr3_1:7046402-7046421 | Msa0346500:intron | 30.0% | |
| TAGATCAGCAAGGATATATT+TGG | - | chr3_1:7046509-7046528 | Msa0346500:CDS | 30.0% | |
| ATATATTTGGCAGTGTGATA+TGG | - | chr3_1:7046522-7046541 | Msa0346500:CDS | 30.0% | |
| GTGTGATATGGTATTCATTA+TGG | - | chr3_1:7046534-7046553 | Msa0346500:CDS | 30.0% | |
| !! | ACTATATTTTGAAGGATTGG+AGG | - | chr3_1:7046565-7046584 | Msa0346500:intron | 30.0% |
| ! | AATGCCATTCCTTGTATTTT+CGG | + | chr3_1:7046656-7046675 | None:intergenic | 30.0% |
| !! | CTATGAACAATGCTGATTTA+AGG | - | chr3_1:7046728-7046747 | Msa0346500:CDS | 30.0% |
| !!! | CATGGATTCTGTAGTTTTTT+TGG | - | chr3_1:7046837-7046856 | Msa0346500:CDS | 30.0% |
| !!! | ATTCTGTAGTTTTTTTGGCT+TGG | - | chr3_1:7046842-7046861 | Msa0346500:CDS | 30.0% |
| ! | TTGCTGCCATGTTTTATATA+TGG | - | chr3_1:7046887-7046906 | Msa0346500:CDS | 30.0% |
| TAATGTATGTTTGTGTGTCA+TGG | - | chr3_1:7046949-7046968 | Msa0346500:intron | 30.0% | |
| AACAAACGTGAATGAATCAG+GGG | + | chr3_1:7039907-7039926 | None:intergenic | 35.0% | |
| GTAACAAACGTGAATGAATC+AGG | + | chr3_1:7039909-7039928 | None:intergenic | 35.0% | |
| AAGGTTTCGAGCTATTCAAT+CGG | - | chr3_1:7039963-7039982 | Msa0346500:three_prime_UTR | 35.0% | |
| !! | AATCGGATGCAAACTGATTT+TGG | - | chr3_1:7039980-7039999 | Msa0346500:three_prime_UTR | 35.0% |
| TTGGTGTGATGTCTAACATT+AGG | + | chr3_1:7040013-7040032 | None:intergenic | 35.0% | |
| TGTTAGACATCACACCAATA+TGG | - | chr3_1:7040015-7040034 | Msa0346500:three_prime_UTR | 35.0% | |
| CCCAAATAAAGTCACCATAT+TGG | + | chr3_1:7040032-7040051 | None:intergenic | 35.0% | |
| ! | GCTCCCCAAGTAATTTTATT+TGG | + | chr3_1:7040115-7040134 | None:intergenic | 35.0% |
| GCAAACACTAAATTGCCTAA+TGG | - | chr3_1:7040184-7040203 | Msa0346500:three_prime_UTR | 35.0% | |
| ACTAAATTGCCTAATGGTGA+GGG | - | chr3_1:7040190-7040209 | Msa0346500:three_prime_UTR | 35.0% | |
| CAGAATCTTCGAAATTTCCA+TGG | + | chr3_1:7040266-7040285 | None:intergenic | 35.0% | |
| CATGGAAATTTCGAAGATTC+TGG | - | chr3_1:7040264-7040283 | Msa0346500:three_prime_UTR | 35.0% | |
| ! | TTCAACGGTCTCAAATCTTT+TGG | + | chr3_1:7040474-7040493 | None:intergenic | 35.0% |
| ! | AGATTTGAGACCGTTGAAAA+AGG | - | chr3_1:7040476-7040495 | Msa0346500:three_prime_UTR | 35.0% |
| !!! | TAATGCTCCACCTTTTTCAA+CGG | + | chr3_1:7040489-7040508 | None:intergenic | 35.0% |
| CATTGACAAAATATAGTGGC+TGG | + | chr3_1:7040626-7040645 | None:intergenic | 35.0% | |
| GGGTCATTGACAAAATATAG+TGG | + | chr3_1:7040630-7040649 | None:intergenic | 35.0% | |
| CAAACCACAATCACGTAATA+GGG | + | chr3_1:7040650-7040669 | None:intergenic | 35.0% | |
| TCAAACCACAATCACGTAAT+AGG | + | chr3_1:7040651-7040670 | None:intergenic | 35.0% | |
| GATATGTAGCACATTCACAT+TGG | - | chr3_1:7040669-7040688 | Msa0346500:three_prime_UTR | 35.0% | |
| GCAATGGTGAATGATTTGAA+GGG | + | chr3_1:7040977-7040996 | None:intergenic | 35.0% | |
| AGCAATGGTGAATGATTTGA+AGG | + | chr3_1:7040978-7040997 | None:intergenic | 35.0% | |
| ! | AATTCAACGCTTTAAGTCGT+AGG | + | chr3_1:7041001-7041020 | None:intergenic | 35.0% |
| !! | AAAGCGTTGAATTGCTGAAT+AGG | - | chr3_1:7041008-7041027 | Msa0346500:intron | 35.0% |
| !! | AAGCGTTGAATTGCTGAATA+GGG | - | chr3_1:7041009-7041028 | Msa0346500:intron | 35.0% |
| ATGACTGTACTTGGACAAAA+TGG | + | chr3_1:7041066-7041085 | None:intergenic | 35.0% | |
| CACAAACATGTTGCAATATC+AGG | + | chr3_1:7041154-7041173 | None:intergenic | 35.0% | |
| !!! | AAATTTTTTATGTCGGCACG+GGG | + | chr3_1:7041195-7041214 | None:intergenic | 35.0% |
| !! | TAGTGGATATGTTAGCTTGT+AGG | - | chr3_1:7041313-7041332 | Msa0346500:intron | 35.0% |
| TAGCTCAGATGGTGAATTAA+GGG | + | chr3_1:7041376-7041395 | None:intergenic | 35.0% | |
| !! | AGGAGTTTTTAGGAGGTATA+GGG | + | chr3_1:7041494-7041513 | None:intergenic | 35.0% |
| TAGCTCAGATGGTGAATTAA+GGG | + | chr3_1:7041376-7041395 | None:intergenic | 35.0% | |
| AGCTACCTACACAGTAATTA+GGG | - | chr3_1:7041539-7041558 | Msa0346500:intron | 35.0% | |
| TTTACAATCTGACCATCTGT+TGG | - | chr3_1:7041568-7041587 | Msa0346500:intron | 35.0% | |
| TAGCTAACTATACCAACAGA+TGG | + | chr3_1:7041583-7041602 | None:intergenic | 35.0% | |
| ! | GACTCCCATATATTCGATTT+TGG | - | chr3_1:7041711-7041730 | Msa0346500:intron | 35.0% |
| GACGCCAAAATCGAATATAT+GGG | + | chr3_1:7041718-7041737 | None:intergenic | 35.0% | |
| AGACGCCAAAATCGAATATA+TGG | + | chr3_1:7041719-7041738 | None:intergenic | 35.0% | |
| !! | TTTTGGTGTGCTAAATCACT+TGG | - | chr3_1:7041856-7041875 | Msa0346500:intron | 35.0% |
| ! | TTTGGTGTGCTAAATCACTT+GGG | - | chr3_1:7041857-7041876 | Msa0346500:intron | 35.0% |
| ! | GAGTCTCTAAAAAACATGTC+TGG | - | chr3_1:7041987-7042006 | Msa0346500:three_prime_UTR | 35.0% |
| ! | CCTGTTCGTGAATTTTGTAT+TGG | + | chr3_1:7042106-7042125 | None:intergenic | 35.0% |
| CCAATACAAAATTCACGAAC+AGG | - | chr3_1:7042103-7042122 | Msa0346500:intron | 35.0% | |
| !!! | TTACCCAGTTTTTTTGGTGA+AGG | - | chr3_1:7042261-7042280 | Msa0346500:three_prime_UTR | 35.0% |
| CTTACCTTCACCAAAAAAAC+TGG | + | chr3_1:7042268-7042287 | None:intergenic | 35.0% | |
| AAAGTCTACAAAATCCACCA+TGG | - | chr3_1:7042326-7042345 | Msa0346500:three_prime_UTR | 35.0% | |
| TTAACCAGCAATTCTTATGG+AGG | - | chr3_1:7042421-7042440 | Msa0346500:three_prime_UTR | 35.0% | |
| TAACCAGCAATTCTTATGGA+GGG | - | chr3_1:7042422-7042441 | Msa0346500:three_prime_UTR | 35.0% | |
| AATTGTGCACACGTTTCTTA+TGG | - | chr3_1:7042676-7042695 | Msa0346500:three_prime_UTR | 35.0% | |
| ATAGCAAACATTATGCCAAG+TGG | + | chr3_1:7042734-7042753 | None:intergenic | 35.0% | |
| GAACTTTACTATGTGTGTCA+AGG | - | chr3_1:7042907-7042926 | Msa0346500:three_prime_UTR | 35.0% | |
| AATAGAAGTTGTTGAGCACA+TGG | + | chr3_1:7043318-7043337 | None:intergenic | 35.0% | |
| AATCCAAAATGAGAAACACG+AGG | - | chr3_1:7043468-7043487 | Msa0346500:intron | 35.0% | |
| ! | ATACCTCGTGTTTCTCATTT+TGG | + | chr3_1:7043474-7043493 | None:intergenic | 35.0% |
| TAACTTTCGAACCTTTCACA+TGG | - | chr3_1:7043621-7043640 | Msa0346500:intron | 35.0% | |
| TGTTTGGTTGACATCATGTT+TGG | - | chr3_1:7043898-7043917 | Msa0346500:intron | 35.0% | |
| ! | CAAATATGGGCTGTTAGTAA+TGG | + | chr3_1:7043986-7044005 | None:intergenic | 35.0% |
| TCCATGAAATAATGAGGTAG+AGG | - | chr3_1:7044150-7044169 | Msa0346500:three_prime_UTR | 35.0% | |
| ACCTCTACCTCATTATTTCA+TGG | + | chr3_1:7044154-7044173 | None:intergenic | 35.0% | |
| AAATAATGAGGTAGAGGTTC+AGG | - | chr3_1:7044156-7044175 | Msa0346500:three_prime_UTR | 35.0% | |
| AAGTATTCTTCAAGAATGGG+TGG | - | chr3_1:7044197-7044216 | Msa0346500:three_prime_UTR | 35.0% | |
| ! | ACAACATTGATATTGGTGCT+TGG | - | chr3_1:7044239-7044258 | Msa0346500:three_prime_UTR | 35.0% |
| ! | CAACATTGATATTGGTGCTT+GGG | - | chr3_1:7044240-7044259 | Msa0346500:three_prime_UTR | 35.0% |
| TTGATCTCAGTTTCCTTAGT+TGG | + | chr3_1:7044557-7044576 | None:intergenic | 35.0% | |
| ! | GATCAAAGTCGTTGATTACT+TGG | - | chr3_1:7044571-7044590 | Msa0346500:intron | 35.0% |
| ! | TTGATTACTTGGGATTTGCT+TGG | - | chr3_1:7044582-7044601 | Msa0346500:intron | 35.0% |
| ! | AAAACCAAATACCTTTTGGG+GGG | + | chr3_1:7044847-7044866 | None:intergenic | 35.0% |
| ! | CAAAACCAAATACCTTTTGG+GGG | + | chr3_1:7044848-7044867 | None:intergenic | 35.0% |
| ACAACACACAAAAGAATGAC+AGG | + | chr3_1:7044874-7044893 | None:intergenic | 35.0% | |
| AAAGTTGAATACCTACTACG+TGG | - | chr3_1:7044987-7045006 | Msa0346500:intron | 35.0% | |
| ACTGATATCTAATGAGCAGA+AGG | - | chr3_1:7045367-7045386 | Msa0346500:intron | 35.0% | |
| ATAAAAACTAATGTGCGGAG+TGG | - | chr3_1:7045470-7045489 | Msa0346500:intron | 35.0% | |
| !! | CAATTGATAGTGGTTAGGAT+AGG | + | chr3_1:7045581-7045600 | None:intergenic | 35.0% |
| TTAGTTAATCCTCAAGCAAC+AGG | + | chr3_1:7045621-7045640 | None:intergenic | 35.0% | |
| !!! | TCATCAGAACTGCCTTATTT+TGG | - | chr3_1:7045641-7045660 | Msa0346500:intron | 35.0% |
| GCAGCCTTAATTTCTATTCA+TGG | - | chr3_1:7045718-7045737 | Msa0346500:intron | 35.0% | |
| AGCATATGTCATTCTTCTGT+TGG | + | chr3_1:7045772-7045791 | None:intergenic | 35.0% | |
| TATTCCTTAGCAAAACACGA+CGG | + | chr3_1:7045982-7046001 | None:intergenic | 35.0% | |
| ! | TCGTGTTTTGCTAAGGAATA+TGG | - | chr3_1:7045982-7046001 | Msa0346500:intron | 35.0% |
| GTTAAGGTCCACAAGAAAAA+TGG | - | chr3_1:7046060-7046079 | Msa0346500:intron | 35.0% | |
| ATGGTTGGATAGGGTTTAAT+TGG | - | chr3_1:7046100-7046119 | Msa0346500:intron | 35.0% | |
| ATGACCATAAAAGACAGATC+AGG | - | chr3_1:7046172-7046191 | Msa0346500:intron | 35.0% | |
| GTGATCATCTTTGATATAGG+AGG | + | chr3_1:7046229-7046248 | None:intergenic | 35.0% | |
| GGAGTGATCATCTTTGATAT+AGG | + | chr3_1:7046232-7046251 | None:intergenic | 35.0% | |
| AAGATGATCACTCCAAATGA+TGG | - | chr3_1:7046238-7046257 | Msa0346500:intron | 35.0% | |
| GATAGCTGAATCACATTTGT+CGG | + | chr3_1:7046484-7046503 | None:intergenic | 35.0% | |
| CTATCTATCATAGATCAGCA+AGG | - | chr3_1:7046499-7046518 | Msa0346500:CDS | 35.0% | |
| GGAATGGCATTCTTCATATA+AGG | - | chr3_1:7046665-7046684 | Msa0346500:intron | 35.0% | |
| CCTTTATGAATGCACTGAAA+AGG | + | chr3_1:7046697-7046716 | None:intergenic | 35.0% | |
| ! | CCTTTTCAGTGCATTCATAA+AGG | - | chr3_1:7046694-7046713 | Msa0346500:CDS | 35.0% |
| ATAATGTGTGCTAGAAGACA+TGG | - | chr3_1:7046819-7046838 | Msa0346500:CDS | 35.0% | |
| GTTTGGTTATCATGCAGAAT+TGG | - | chr3_1:7046925-7046944 | Msa0346500:intron | 35.0% | |
| CACTAAATTGCCTAATGGTG+AGG | - | chr3_1:7040189-7040208 | Msa0346500:three_prime_UTR | 40.0% | |
| ! | TTTGAGACCGTTGAAAAAGG+TGG | - | chr3_1:7040479-7040498 | Msa0346500:three_prime_UTR | 40.0% |
| ATGACCCTATTACGTGATTG+TGG | - | chr3_1:7040643-7040662 | Msa0346500:intron | 40.0% | |
| !! | CACATTGGTTTACGTGATTG+TGG | - | chr3_1:7040684-7040703 | Msa0346500:three_prime_UTR | 40.0% |
| GGTGTACTTGAGATGTAGAA+TGG | + | chr3_1:7040729-7040748 | None:intergenic | 40.0% | |
| TACTTGGACAAAATGGAAGG+TGG | + | chr3_1:7041059-7041078 | None:intergenic | 40.0% | |
| CTGTACTTGGACAAAATGGA+AGG | + | chr3_1:7041062-7041081 | None:intergenic | 40.0% | |
| ! | AAGGGTTTGATGACTGTACT+TGG | + | chr3_1:7041075-7041094 | None:intergenic | 40.0% |
| CAAACCCTTCAGTTCCTTAT+TGG | - | chr3_1:7041086-7041105 | Msa0346500:intron | 40.0% | |
| !! | AGGAGTTTTCAGGAGGTATA+GGG | + | chr3_1:7041346-7041365 | None:intergenic | 40.0% |
| GTAGCTCAGATGGTGAATTA+AGG | + | chr3_1:7041377-7041396 | None:intergenic | 40.0% | |
| !! | TAGTGGATATGTTGGCTTGT+AGG | - | chr3_1:7041461-7041480 | Msa0346500:intron | 40.0% |
| !! | GAGGAGTTTTTAGGAGGTAT+AGG | + | chr3_1:7041495-7041514 | None:intergenic | 40.0% |
| ATACCTCCTAAAAACTCCTC+TGG | - | chr3_1:7041495-7041514 | Msa0346500:intron | 40.0% | |
| GTAGCTCAGATGGTGAATTA+AGG | + | chr3_1:7041377-7041396 | None:intergenic | 40.0% | |
| GAGCTACCTACACAGTAATT+AGG | - | chr3_1:7041538-7041557 | Msa0346500:intron | 40.0% | |
| GCTACCTACACAGTAATTAG+GGG | - | chr3_1:7041540-7041559 | Msa0346500:intron | 40.0% | |
| CTAACCCCTAATTACTGTGT+AGG | + | chr3_1:7041547-7041566 | None:intergenic | 40.0% | |
| !! | TATTCGATTTTGGCGTCTAG+TGG | - | chr3_1:7041721-7041740 | Msa0346500:intron | 40.0% |
| !! | ATTCGATTTTGGCGTCTAGT+GGG | - | chr3_1:7041722-7041741 | Msa0346500:intron | 40.0% |
| AAAATAGTTCAGTGTGCTGC+TGG | - | chr3_1:7041791-7041810 | Msa0346500:intron | 40.0% | |
| CAGTAGCATATGGCCAATTA+TGG | + | chr3_1:7041818-7041837 | None:intergenic | 40.0% | |
| CAAAACATTCATCCATGCAG+AGG | + | chr3_1:7041841-7041860 | None:intergenic | 40.0% | |
| ! | CTCTGCATGGATGAATGTTT+TGG | - | chr3_1:7041839-7041858 | Msa0346500:intron | 40.0% |
| TTGGTGTGCTAAATCACTTG+GGG | - | chr3_1:7041858-7041877 | Msa0346500:intron | 40.0% | |
| TTGTGCAAGTCTTGCATAGA+AGG | - | chr3_1:7041900-7041919 | Msa0346500:intron | 40.0% | |
| ! | AATTGGGAAGAGCTTGCTTA+GGG | + | chr3_1:7042402-7042421 | None:intergenic | 40.0% |
| ! | AAATTGGGAAGAGCTTGCTT+AGG | + | chr3_1:7042403-7042422 | None:intergenic | 40.0% |
| TTTCCCTCCATAAGAATTGC+TGG | + | chr3_1:7042428-7042447 | None:intergenic | 40.0% | |
| TTGCTTGAAGGAAATCTGCA+TGG | - | chr3_1:7042526-7042545 | Msa0346500:intron | 40.0% | |
| AATTGTGCACACGTTTCCTA+TGG | - | chr3_1:7042551-7042570 | Msa0346500:three_prime_UTR | 40.0% | |
| ATACCATACATTGTGCCAAG+TGG | + | chr3_1:7042609-7042628 | None:intergenic | 40.0% | |
| AATGATGCTTGCTTGCTTGA+AGG | - | chr3_1:7042639-7042658 | Msa0346500:three_prime_UTR | 40.0% | |
| TTGCTTGAAGGAAATCTGCA+TGG | - | chr3_1:7042526-7042545 | Msa0346500:intron | 40.0% | |
| TGCACACGTTTCTTATGGTT+GGG | - | chr3_1:7042681-7042700 | Msa0346500:three_prime_UTR | 40.0% | |
| TCTTATGGTTGGGGTAATGA+TGG | - | chr3_1:7042691-7042710 | Msa0346500:three_prime_UTR | 40.0% | |
| CAAACATTATGCCAAGTGGA+TGG | + | chr3_1:7042730-7042749 | None:intergenic | 40.0% | |
| ! | GAAATGTGGTTGATGTCTTG+TGG | + | chr3_1:7042852-7042871 | None:intergenic | 40.0% |
| CTGGTAGAAAACACGAAATG+TGG | + | chr3_1:7042866-7042885 | None:intergenic | 40.0% | |
| ! | AAAGTGTTCATTCTTGGCTC+TGG | + | chr3_1:7042885-7042904 | None:intergenic | 40.0% |
| AGAGCCAAGAATGAACACTT+TGG | - | chr3_1:7042884-7042903 | Msa0346500:three_prime_UTR | 40.0% | |
| GAGCCAAGAATGAACACTTT+GGG | - | chr3_1:7042885-7042904 | Msa0346500:three_prime_UTR | 40.0% | |
| ! | GTTCCCAAAGTGTTCATTCT+TGG | + | chr3_1:7042891-7042910 | None:intergenic | 40.0% |
| GGTGCGATATGTTTGATGAA+AGG | - | chr3_1:7042944-7042963 | Msa0346500:three_prime_UTR | 40.0% | |
| CAGTTGCAGAAAGAGATTCT+CGG | + | chr3_1:7043056-7043075 | None:intergenic | 40.0% | |
| AAACTAACGGCGACAATAGA+AGG | + | chr3_1:7043511-7043530 | None:intergenic | 40.0% | |
| TATGTCGTACTCCATGTGAA+AGG | + | chr3_1:7043635-7043654 | None:intergenic | 40.0% | |
| TCAGTGACAAAGTAAGTAGC+AGG | + | chr3_1:7044032-7044051 | None:intergenic | 40.0% | |
| !!! | TTTGGTTTTGGAAAGGAGTG+TGG | - | chr3_1:7044097-7044116 | Msa0346500:three_prime_UTR | 40.0% |
| TTCTTCAAGAATGGGTGGTT+TGG | - | chr3_1:7044202-7044221 | Msa0346500:three_prime_UTR | 40.0% | |
| ! | TTATTGGAGGAGTGCAATCA+GGG | + | chr3_1:7044311-7044330 | None:intergenic | 40.0% |
| ! | ATTATTGGAGGAGTGCAATC+AGG | + | chr3_1:7044312-7044331 | None:intergenic | 40.0% |
| ACTGCATCTGATGTTAACTC+TGG | - | chr3_1:7044402-7044421 | Msa0346500:CDS | 40.0% | |
| GTTTGTTTATTTGCCACTGC+AGG | - | chr3_1:7044495-7044514 | Msa0346500:intron | 40.0% | |
| CAAAATCCTAACCAAGGCAA+AGG | + | chr3_1:7044521-7044540 | None:intergenic | 40.0% | |
| CTCTGACAAAATCCTAACCA+AGG | + | chr3_1:7044527-7044546 | None:intergenic | 40.0% | |
| !! | TTGCTTGGAAGTGCTCATTT+CGG | - | chr3_1:7044597-7044616 | Msa0346500:intron | 40.0% |
| TGTCGAGGCAGAAAATGAAT+TGG | - | chr3_1:7044622-7044641 | Msa0346500:intron | 40.0% | |
| ! | GAATTGGTGTTCAAAATCGG+AGG | - | chr3_1:7044638-7044657 | Msa0346500:intron | 40.0% |
| AGAACAAAGATGTCTACCTG+AGG | - | chr3_1:7044738-7044757 | Msa0346500:intron | 40.0% | |
| ATTCGTATTGTCATCGTCTC+AGG | - | chr3_1:7044919-7044938 | Msa0346500:intron | 40.0% | |
| TATTGTCATCGTCTCAGGAA+CGG | - | chr3_1:7044924-7044943 | Msa0346500:intron | 40.0% | |
| TTTCTTCACAAGTGTCAACC+AGG | - | chr3_1:7045106-7045125 | Msa0346500:intron | 40.0% | |
| TTCTTCACAAGTGTCAACCA+GGG | - | chr3_1:7045107-7045126 | Msa0346500:intron | 40.0% | |
| ! | ACAGTACTGGACACACTAAA+TGG | - | chr3_1:7045154-7045173 | Msa0346500:intron | 40.0% |
| CAAGATACACAAAGTCGACT+CGG | - | chr3_1:7045245-7045264 | Msa0346500:intron | 40.0% | |
| ! | TTATGCATTCCTGTTGCTTG+AGG | - | chr3_1:7045609-7045628 | Msa0346500:intron | 40.0% |
| TCATGGTACAAGAGGCAATT+AGG | - | chr3_1:7045735-7045754 | Msa0346500:intron | 40.0% | |
| TCCTAACAAGAACATGTTCG+AGG | - | chr3_1:7046038-7046057 | Msa0346500:intron | 40.0% | |
| ACCTCGAACATGTTCTTGTT+AGG | + | chr3_1:7046042-7046061 | None:intergenic | 40.0% | |
| CAAGAACATGTTCGAGGTTA+AGG | - | chr3_1:7046044-7046063 | Msa0346500:intron | 40.0% | |
| !!! | ACACCTTGCCATTTTTCTTG+TGG | + | chr3_1:7046071-7046090 | None:intergenic | 40.0% |
| AAAATGGCAAGGTGTACTTC+AGG | - | chr3_1:7046076-7046095 | Msa0346500:intron | 40.0% | |
| AAATGGCAAGGTGTACTTCA+GGG | - | chr3_1:7046077-7046096 | Msa0346500:intron | 40.0% | |
| !! | TTTAATTGGCCTTGGTGCAT+GGG | - | chr3_1:7046114-7046133 | Msa0346500:intron | 40.0% |
| ! | CACTCCTGATCTGTCTTTTA+TGG | + | chr3_1:7046179-7046198 | None:intergenic | 40.0% |
| CATAAAAGACAGATCAGGAG+TGG | - | chr3_1:7046177-7046196 | Msa0346500:intron | 40.0% | |
| CGACCTGTGTTTAAGAGAAT+AGG | + | chr3_1:7046408-7046427 | None:intergenic | 40.0% | |
| TTGCTGTCACCGAAAATACA+AGG | - | chr3_1:7046644-7046663 | Msa0346500:intron | 40.0% | |
| GTCACCGAAAATACAAGGAA+TGG | - | chr3_1:7046649-7046668 | Msa0346500:intron | 40.0% | |
| ! | TGATTTAAGGCATGTGTACC+AGG | - | chr3_1:7046741-7046760 | Msa0346500:CDS | 40.0% |
| !!! | CTGTAGTTTTTTTGGCTTGG+TGG | - | chr3_1:7046845-7046864 | Msa0346500:CDS | 40.0% |
| !!! | GGCTTCTTTTGAGTTCAGTT+TGG | - | chr3_1:7046908-7046927 | Msa0346500:intron | 40.0% |
| !! | CTGACTGCTTTTGCACACAA+CGG | - | chr3_1:7039828-7039847 | Msa0346500:three_prime_UTR | 45.0% |
| TGCACACAACGGTATGTTTG+AGG | - | chr3_1:7039839-7039858 | Msa0346500:three_prime_UTR | 45.0% | |
| !! | AATGGTGGATGCTTCTTCGA+AGG | - | chr3_1:7039944-7039963 | Msa0346500:three_prime_UTR | 45.0% |
| ! | GTTGCTTTCGTGTGTTGACA+TGG | - | chr3_1:7040135-7040154 | Msa0346500:three_prime_UTR | 45.0% |
| TGCCTAATGGTGAGGGATTA+AGG | - | chr3_1:7040197-7040216 | Msa0346500:three_prime_UTR | 45.0% | |
| CTCCTTAATCCCTCACCATT+AGG | + | chr3_1:7040202-7040221 | None:intergenic | 45.0% | |
| GATTGCGCAACATATATCGC+AGG | - | chr3_1:7040221-7040240 | Msa0346500:three_prime_UTR | 45.0% | |
| ! | GCTTTAAGTCGTAGGAGCAA+TGG | + | chr3_1:7040993-7041012 | None:intergenic | 45.0% |
| TGCTGAATAGGGTGTGTGAT+TGG | - | chr3_1:7041020-7041039 | Msa0346500:intron | 45.0% | |
| GAGGCCAATAAGGAACTGAA+GGG | + | chr3_1:7041093-7041112 | None:intergenic | 45.0% | |
| GAAAAGGGAGGTTAGAAGAG+GGG | + | chr3_1:7041124-7041143 | None:intergenic | 45.0% | |
| CGAAAAGGGAGGTTAGAAGA+GGG | + | chr3_1:7041125-7041144 | None:intergenic | 45.0% | |
| ! | CCTCTTCTAACCTCCCTTTT+CGG | - | chr3_1:7041123-7041142 | Msa0346500:intron | 45.0% |
| ! | CTCTTCTAACCTCCCTTTTC+GGG | - | chr3_1:7041124-7041143 | Msa0346500:intron | 45.0% |
| ATATCAGGGACTCCCGAAAA+GGG | + | chr3_1:7041139-7041158 | None:intergenic | 45.0% | |
| AATATCAGGGACTCCCGAAA+AGG | + | chr3_1:7041140-7041159 | None:intergenic | 45.0% | |
| !! | GAGGAGTTTTCAGGAGGTAT+AGG | + | chr3_1:7041347-7041366 | None:intergenic | 45.0% |
| ATACCTCCTGAAAACTCCTC+TGG | - | chr3_1:7041347-7041366 | Msa0346500:intron | 45.0% | |
| TACTGTGTAGGTAGCTCAGA+TGG | + | chr3_1:7041387-7041406 | None:intergenic | 45.0% | |
| !! | ACACCAGAGGAGTTTTTAGG+AGG | + | chr3_1:7041501-7041520 | None:intergenic | 45.0% |
| TACTGTGTAGGTAGCTCAGA+TGG | + | chr3_1:7041387-7041406 | None:intergenic | 45.0% | |
| CACATCAGAGATGACACAAG+AGG | + | chr3_1:7041667-7041686 | None:intergenic | 45.0% | |
| !! | TTCGATTTTGGCGTCTAGTG+GGG | - | chr3_1:7041723-7041742 | Msa0346500:intron | 45.0% |
| ! | GAAGAATTTGCTTGCAGCAC+TGG | + | chr3_1:7042374-7042393 | None:intergenic | 45.0% |
| TCTTATGGAGGGAAAACCCT+AGG | - | chr3_1:7042433-7042452 | Msa0346500:three_prime_UTR | 45.0% | |
| CTTATGGAGGGAAAACCCTA+GGG | - | chr3_1:7042434-7042453 | Msa0346500:three_prime_UTR | 45.0% | |
| GCCATAGCACATGATCTGAA+GGG | + | chr3_1:7042486-7042505 | None:intergenic | 45.0% | |
| AGATCATGTGCTATGGCCTT+GGG | - | chr3_1:7042489-7042508 | Msa0346500:intron | 45.0% | |
| ! | TCAGGTTGCTTCTTGCTTGA+AGG | - | chr3_1:7042514-7042533 | Msa0346500:intron | 45.0% |
| TGCACACGTTTCCTATGGTT+GGG | - | chr3_1:7042556-7042575 | Msa0346500:three_prime_UTR | 45.0% | |
| TCCTATGGTTGGGGTAATGA+TGG | - | chr3_1:7042566-7042585 | Msa0346500:three_prime_UTR | 45.0% | |
| ACCATCATTACCCCAACCAT+AGG | + | chr3_1:7042570-7042589 | None:intergenic | 45.0% | |
| GCTGCAAATAACCATCCACT+TGG | - | chr3_1:7042591-7042610 | Msa0346500:three_prime_UTR | 45.0% | |
| CATACATTGTGCCAAGTGGA+TGG | + | chr3_1:7042605-7042624 | None:intergenic | 45.0% | |
| CATCCACTTGGCACAATGTA+TGG | - | chr3_1:7042603-7042622 | Msa0346500:three_prime_UTR | 45.0% | |
| GTGCACACGTTTCTTATGGT+TGG | - | chr3_1:7042680-7042699 | Msa0346500:three_prime_UTR | 45.0% | |
| GCACACGTTTCTTATGGTTG+GGG | - | chr3_1:7042682-7042701 | Msa0346500:three_prime_UTR | 45.0% | |
| GTTGCAAGTAACCATCCACT+TGG | - | chr3_1:7042716-7042735 | Msa0346500:three_prime_UTR | 45.0% | |
| CCTTGAACTGTTGACATGAG+AGG | + | chr3_1:7043556-7043575 | None:intergenic | 45.0% | |
| CCTCTCATGTCAACAGTTCA+AGG | - | chr3_1:7043553-7043572 | Msa0346500:intron | 45.0% | |
| TCAACAGTTCAAGGCAATGC+TGG | - | chr3_1:7043562-7043581 | Msa0346500:intron | 45.0% | |
| TCAGAGTGCATTGCCAACTA+AGG | - | chr3_1:7044541-7044560 | Msa0346500:intron | 45.0% | |
| ! | TTGGTGTTCAAAATCGGAGG+TGG | - | chr3_1:7044641-7044660 | Msa0346500:intron | 45.0% |
| TGGTGTTCAAAATCGGAGGT+GGG | - | chr3_1:7044642-7044661 | Msa0346500:intron | 45.0% | |
| !! | TTACAGCTAGCTTTAGGGGA+TGG | + | chr3_1:7044706-7044725 | None:intergenic | 45.0% |
| !! | TGCGTTACAGCTAGCTTTAG+GGG | + | chr3_1:7044710-7044729 | None:intergenic | 45.0% |
| !! | GTGCGTTACAGCTAGCTTTA+GGG | + | chr3_1:7044711-7044730 | None:intergenic | 45.0% |
| ATTATGTCCTGGTGCTTGCA+GGG | + | chr3_1:7044776-7044795 | None:intergenic | 45.0% | |
| TCTTCACAAGTGTCAACCAG+GGG | - | chr3_1:7045108-7045127 | Msa0346500:intron | 45.0% | |
| TCTATAAGTAACAGTCCCCC+TGG | + | chr3_1:7045127-7045146 | None:intergenic | 45.0% | |
| ! | ATTGCCGTCGTGTTTTGCTA+AGG | - | chr3_1:7045975-7045994 | Msa0346500:intron | 45.0% |
| GGTCCACAAGAAAAATGGCA+AGG | - | chr3_1:7046065-7046084 | Msa0346500:intron | 45.0% | |
| TACTTCAGGGATGGTTGGAT+AGG | - | chr3_1:7046090-7046109 | Msa0346500:intron | 45.0% | |
| ACTTCAGGGATGGTTGGATA+GGG | - | chr3_1:7046091-7046110 | Msa0346500:intron | 45.0% | |
| ! | GGATAGGGTTTAATTGGCCT+TGG | - | chr3_1:7046106-7046125 | Msa0346500:intron | 45.0% |
| !! | GTTTAATTGGCCTTGGTGCA+TGG | - | chr3_1:7046113-7046132 | Msa0346500:intron | 45.0% |
| ATCACCATGCTGCCATCATT+TGG | + | chr3_1:7046253-7046272 | None:intergenic | 45.0% | |
| !! | ACATCTTCTGACATCGACTC+TGG | - | chr3_1:7046304-7046323 | Msa0346500:intron | 45.0% |
| !! | TGACATCGACTCTGGATATC+TGG | - | chr3_1:7046312-7046331 | Msa0346500:intron | 45.0% |
| CTTAAACACAGGTCGTGTCT+TGG | - | chr3_1:7046413-7046432 | Msa0346500:intron | 45.0% | |
| TTTGAAGGATTGGAGGTGAC+TGG | - | chr3_1:7046572-7046591 | Msa0346500:intron | 45.0% | |
| GCGAGAAGTAATGGTTAACC+TGG | + | chr3_1:7046762-7046781 | None:intergenic | 45.0% | |
| ACTGGACTCTCTTCCTAACT+GGG | + | chr3_1:7046789-7046808 | None:intergenic | 45.0% | |
| AGTTAGGAAGAGAGTCCAGT+GGG | - | chr3_1:7046789-7046808 | Msa0346500:CDS | 45.0% | |
| CACATTATTGCAAAGCCCAC+TGG | + | chr3_1:7046807-7046826 | None:intergenic | 45.0% | |
| !!! | TAGATTAATTATATTATTTT+TGG | - | chr3_1:7041418-7041437 | Msa0346500:intron | 5.0% |
| TACCACACTAGTTCCAGCTC+TGG | + | chr3_1:7040295-7040314 | None:intergenic | 50.0% | |
| CATGAACTGACCATCACTCG+GGG | + | chr3_1:7040430-7040449 | None:intergenic | 50.0% | |
| GCATGAACTGACCATCACTC+GGG | + | chr3_1:7040431-7040450 | None:intergenic | 50.0% | |
| GGCATGAACTGACCATCACT+CGG | + | chr3_1:7040432-7040451 | None:intergenic | 50.0% | |
| GTGATGGTCAGTTCATGCCA+CGG | - | chr3_1:7040433-7040452 | Msa0346500:three_prime_UTR | 50.0% | |
| CAGTTCATGCCACGGATGAA+AGG | - | chr3_1:7040441-7040460 | Msa0346500:three_prime_UTR | 50.0% | |
| TCATGCCACGGATGAAAGGA+AGG | - | chr3_1:7040445-7040464 | Msa0346500:three_prime_UTR | 50.0% | |
| !! | GTGTGGCTTGTTTGCATGAG+AGG | - | chr3_1:7040934-7040953 | Msa0346500:three_prime_UTR | 50.0% |
| GGAGGCCAATAAGGAACTGA+AGG | + | chr3_1:7041094-7041113 | None:intergenic | 50.0% | |
| GGAAATCGAGGAGGCCAATA+AGG | + | chr3_1:7041103-7041122 | None:intergenic | 50.0% | |
| TAGAAGAGGGGAAATCGAGG+AGG | + | chr3_1:7041112-7041131 | None:intergenic | 50.0% | |
| GGTTAGAAGAGGGGAAATCG+AGG | + | chr3_1:7041115-7041134 | None:intergenic | 50.0% | |
| CCGAAAAGGGAGGTTAGAAG+AGG | + | chr3_1:7041126-7041145 | None:intergenic | 50.0% | |
| TAGCATAAGTCGCTGCGACT+TGG | - | chr3_1:7041220-7041239 | Msa0346500:intron | 50.0% | |
| !! | ACACCAGAGGAGTTTTCAGG+AGG | + | chr3_1:7041353-7041372 | None:intergenic | 50.0% |
| GGTGAATTAAGGGACACCAG+AGG | + | chr3_1:7041366-7041385 | None:intergenic | 50.0% | |
| ! | GGGACACCAGAGGAGTTTTT+AGG | + | chr3_1:7041504-7041523 | None:intergenic | 50.0% |
| GGTGAATTAAGGGACACCAG+AGG | + | chr3_1:7041366-7041385 | None:intergenic | 50.0% | |
| ! | GTGTGCTGCTGGTCCATAAT+TGG | - | chr3_1:7041802-7041821 | Msa0346500:intron | 50.0% |
| CATGCAGAGGCAGTAGCATA+TGG | + | chr3_1:7041828-7041847 | None:intergenic | 50.0% | |
| CATATGCTACTGCCTCTGCA+TGG | - | chr3_1:7041826-7041845 | Msa0346500:intron | 50.0% | |
| GCCCTTCAGATCATGTGCTA+TGG | - | chr3_1:7042482-7042501 | Msa0346500:intron | 50.0% | |
| GGCCATAGCACATGATCTGA+AGG | + | chr3_1:7042487-7042506 | None:intergenic | 50.0% | |
| CAGATCATGTGCTATGGCCT+TGG | - | chr3_1:7042488-7042507 | Msa0346500:intron | 50.0% | |
| AAGAAGCAACCTGACTCCCA+AGG | + | chr3_1:7042508-7042527 | None:intergenic | 50.0% | |
| GTGCACACGTTTCCTATGGT+TGG | - | chr3_1:7042555-7042574 | Msa0346500:three_prime_UTR | 50.0% | |
| GCACACGTTTCCTATGGTTG+GGG | - | chr3_1:7042557-7042576 | Msa0346500:three_prime_UTR | 50.0% | |
| ATATCGCACCAGCAGCTTCA+CGG | + | chr3_1:7042934-7042953 | None:intergenic | 50.0% | |
| ACAGTTCAAGGCAATGCTGG+TGG | - | chr3_1:7043565-7043584 | Msa0346500:intron | 50.0% | |
| CAGTTCAAGGCAATGCTGGT+GGG | - | chr3_1:7043566-7043585 | Msa0346500:intron | 50.0% | |
| AGTTCAAGGCAATGCTGGTG+GGG | - | chr3_1:7043567-7043586 | Msa0346500:intron | 50.0% | |
| !! | GATTGACAGAGGCGTTAGGA+AGG | - | chr3_1:7043591-7043610 | Msa0346500:intron | 50.0% |
| !! | CAGAGGCGTTAGGAAGGATT+TGG | - | chr3_1:7043597-7043616 | Msa0346500:intron | 50.0% |
| !! | GAATGGGTGGTTTGGCTTGA+AGG | - | chr3_1:7044210-7044229 | Msa0346500:three_prime_UTR | 50.0% |
| GTGCTCATTTCGGATTGTCG+AGG | - | chr3_1:7044607-7044626 | Msa0346500:intron | 50.0% | |
| TGTTCAAAATCGGAGGTGGG+TGG | - | chr3_1:7044645-7044664 | Msa0346500:intron | 50.0% | |
| GTTCAAAATCGGAGGTGGGT+GGG | - | chr3_1:7044646-7044665 | Msa0346500:intron | 50.0% | |
| TTCAAAATCGGAGGTGGGTG+GGG | - | chr3_1:7044647-7044666 | Msa0346500:intron | 50.0% | |
| !! | CGTGCGTTACAGCTAGCTTT+AGG | + | chr3_1:7044712-7044731 | None:intergenic | 50.0% |
| AAAGCTAGCTGTAACGCACG+AGG | - | chr3_1:7044712-7044731 | Msa0346500:intron | 50.0% | |
| GATTATGTCCTGGTGCTTGC+AGG | + | chr3_1:7044777-7044796 | None:intergenic | 50.0% | |
| CCATGGGCTTGATTATGTCC+TGG | + | chr3_1:7044787-7044806 | None:intergenic | 50.0% | |
| AGTTTGCCTAGATGCTGCTG+AGG | - | chr3_1:7044814-7044833 | Msa0346500:intron | 50.0% | |
| !! | GGTTCCCCCCAAAAGGTATT+TGG | - | chr3_1:7044840-7044859 | Msa0346500:intron | 50.0% |
| GATCTCAAGCTCCACGTAGT+AGG | + | chr3_1:7045001-7045020 | None:intergenic | 50.0% | |
| CTTCACAAGTGTCAACCAGG+GGG | - | chr3_1:7045109-7045128 | Msa0346500:intron | 50.0% | |
| AGGTGTACTTCAGGGATGGT+TGG | - | chr3_1:7046085-7046104 | Msa0346500:intron | 50.0% | |
| TAATGCTGACCCATGCACCA+AGG | + | chr3_1:7046126-7046145 | None:intergenic | 50.0% | |
| AGACAGATCAGGAGTGGAAG+TGG | - | chr3_1:7046183-7046202 | Msa0346500:intron | 50.0% | |
| CACTCCAAATGATGGCAGCA+TGG | - | chr3_1:7046246-7046265 | Msa0346500:intron | 50.0% | |
| ACACAGGTCGTGTCTTGGTT+TGG | - | chr3_1:7046418-7046437 | Msa0346500:intron | 50.0% | |
| ! | GGTTTGGTTTCTGCGTGTCT+TGG | - | chr3_1:7046434-7046453 | Msa0346500:intron | 50.0% |
| GGTTTCTGCGTGTCTTGGTT+TGG | - | chr3_1:7046439-7046458 | Msa0346500:intron | 50.0% | |
| !! | GTCTTGGTTTGGTTTCTGCG+AGG | - | chr3_1:7046429-7046448 | Msa0346500:intron | 50.0% |
| CTTATGTGCAGCGCGTAACT+TGG | - | chr3_1:7046600-7046619 | Msa0346500:intron | 50.0% | |
| CACTGGACTCTCTTCCTAAC+TGG | + | chr3_1:7046790-7046809 | None:intergenic | 50.0% | |
| CAGTTAGGAAGAGAGTCCAG+TGG | - | chr3_1:7046788-7046807 | Msa0346500:CDS | 50.0% | |
| GATTCTGGACAGACCAGAGC+TGG | - | chr3_1:7040279-7040298 | Msa0346500:three_prime_UTR | 55.0% | |
| GACCAGAGCTGGAACTAGTG+TGG | - | chr3_1:7040290-7040309 | Msa0346500:three_prime_UTR | 55.0% | |
| GCAATCCTTTCCCCGAGTGA+TGG | - | chr3_1:7040417-7040436 | Msa0346500:three_prime_UTR | 55.0% | |
| ACTGACCATCACTCGGGGAA+AGG | + | chr3_1:7040425-7040444 | None:intergenic | 55.0% | |
| TGCCACGGATGAAAGGAAGG+AGG | - | chr3_1:7040448-7040467 | Msa0346500:three_prime_UTR | 55.0% | |
| GTCGCAGCGACTTATGCTAC+CGG | + | chr3_1:7041219-7041238 | None:intergenic | 55.0% | |
| ! | GGGACACCAGAGGAGTTTTC+AGG | + | chr3_1:7041356-7041375 | None:intergenic | 55.0% |
| !! | GGGAGATTGACAGAGGCGTT+AGG | - | chr3_1:7043587-7043606 | Msa0346500:intron | 55.0% |
| TGCAGGCCTTTGCCTTGGTT+AGG | - | chr3_1:7044512-7044531 | Msa0346500:intron | 55.0% | |
| TGGGTGGGGATCTCTTTGCA+AGG | - | chr3_1:7044661-7044680 | Msa0346500:intron | 55.0% | |
| GATCTCTTTGCAAGGCGCGT+AGG | - | chr3_1:7044669-7044688 | Msa0346500:intron | 55.0% | |
| AGGGAATAGGGACATGCCTC+AGG | + | chr3_1:7044757-7044776 | None:intergenic | 55.0% | |
| CCTGGTGCTTGCAGGGAATA+GGG | + | chr3_1:7044769-7044788 | None:intergenic | 55.0% | |
| TCCTGGTGCTTGCAGGGAAT+AGG | + | chr3_1:7044770-7044789 | None:intergenic | 55.0% | |
| GGCAAGGTGTACTTCAGGGA+TGG | - | chr3_1:7046081-7046100 | Msa0346500:intron | 55.0% | |
| GCAGCGCGTAACTTGGTCAA+AGG | - | chr3_1:7046607-7046626 | Msa0346500:intron | 55.0% | |
| ! | CTGGGCACTGCGAGAAGTAA+TGG | + | chr3_1:7046771-7046790 | None:intergenic | 55.0% |
| ACTTCTCGCAGTGCCCAGTT+AGG | - | chr3_1:7046773-7046792 | Msa0346500:CDS | 55.0% | |
| GGCCTCCTTCCTTTCATCCG+TGG | + | chr3_1:7040453-7040472 | None:intergenic | 60.0% | |
| TCAGGGACTCCCGAAAAGGG+AGG | + | chr3_1:7041136-7041155 | None:intergenic | 60.0% | |
| ! | GTGCTATGGCCTTGGGAGTC+AGG | - | chr3_1:7042496-7042515 | Msa0346500:intron | 60.0% |
| GTCAAGGACCGTGAAGCTGC+TGG | - | chr3_1:7042923-7042942 | Msa0346500:three_prime_UTR | 60.0% | |
| GCTGGTGGGGAGATTGACAG+AGG | - | chr3_1:7043580-7043599 | Msa0346500:intron | 60.0% | |
| ACCAAGGCAAAGGCCTGCAG+TGG | + | chr3_1:7044511-7044530 | None:intergenic | 60.0% | |
| CCCTATTCCCTGCAAGCACC+AGG | - | chr3_1:7044766-7044785 | Msa0346500:intron | 60.0% | |
| TGCCTAGATGCTGCTGAGGC+AGG | - | chr3_1:7044818-7044837 | Msa0346500:intron | 60.0% | |
| GCCTAGATGCTGCTGAGGCA+GGG | - | chr3_1:7044819-7044838 | Msa0346500:intron | 60.0% | |
| ACCCTGCCTCAGCAGCATCT+AGG | + | chr3_1:7044823-7044842 | None:intergenic | 60.0% | |
| GCCACTGCAGGCCTTTGCCT+TGG | - | chr3_1:7044507-7044526 | Msa0346500:intron | 65.0% | |
| GAGGCAGGGTTCCCCCCAAA+AGG | - | chr3_1:7044833-7044852 | Msa0346500:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 7039807 | 7047173 | 7039807 | ID=Msa0346500;Name=Msa0346500 |
| chr3_1 | mRNA | 7039807 | 7047173 | 7039807 | ID=Msa0346500-mRNA-1;Parent=Msa0346500;Name=Msa0346500-mRNA-1;_AED=0.29;_eAED=0.33;_QI=0|0.77|0.8|1|0.55|0.5|10|2399|203 |
| chr3_1 | exon | 7039807 | 7040533 | 7039807 | ID=Msa0346500-mRNA-1:exon:1985;Parent=Msa0346500-mRNA-1 |
| chr3_1 | exon | 7040645 | 7041016 | 7040645 | ID=Msa0346500-mRNA-1:exon:1984;Parent=Msa0346500-mRNA-1 |
| chr3_1 | exon | 7041954 | 7042039 | 7041954 | ID=Msa0346500-mRNA-1:exon:1983;Parent=Msa0346500-mRNA-1 |
| chr3_1 | exon | 7042126 | 7042463 | 7042126 | ID=Msa0346500-mRNA-1:exon:1982;Parent=Msa0346500-mRNA-1 |
| chr3_1 | exon | 7042549 | 7042968 | 7042549 | ID=Msa0346500-mRNA-1:exon:1981;Parent=Msa0346500-mRNA-1 |
| chr3_1 | exon | 7043320 | 7043411 | 7043320 | ID=Msa0346500-mRNA-1:exon:1980;Parent=Msa0346500-mRNA-1 |
| chr3_1 | exon | 7044015 | 7044489 | 7044015 | ID=Msa0346500-mRNA-1:exon:1979;Parent=Msa0346500-mRNA-1 |
| chr3_1 | exon | 7046483 | 7046576 | 7046483 | ID=Msa0346500-mRNA-1:exon:1978;Parent=Msa0346500-mRNA-1 |
| chr3_1 | exon | 7046672 | 7046919 | 7046672 | ID=Msa0346500-mRNA-1:exon:1977;Parent=Msa0346500-mRNA-1 |
| chr3_1 | exon | 7047015 | 7047173 | 7047015 | ID=Msa0346500-mRNA-1:exon:1976;Parent=Msa0346500-mRNA-1 |
| chr3_1 | CDS | 7047015 | 7047173 | 7047015 | ID=Msa0346500-mRNA-1:cds;Parent=Msa0346500-mRNA-1 |
| chr3_1 | CDS | 7046672 | 7046919 | 7046672 | ID=Msa0346500-mRNA-1:cds;Parent=Msa0346500-mRNA-1 |
| chr3_1 | CDS | 7046483 | 7046576 | 7046483 | ID=Msa0346500-mRNA-1:cds;Parent=Msa0346500-mRNA-1 |
| chr3_1 | CDS | 7044379 | 7044489 | 7044379 | ID=Msa0346500-mRNA-1:cds;Parent=Msa0346500-mRNA-1 |
| chr3_1 | three_prime_UTR | 7044015 | 7044378 | 7044015 | ID=Msa0346500-mRNA-1:three_prime_utr;Parent=Msa0346500-mRNA-1 |
| chr3_1 | three_prime_UTR | 7043320 | 7043411 | 7043320 | ID=Msa0346500-mRNA-1:three_prime_utr;Parent=Msa0346500-mRNA-1 |
| chr3_1 | three_prime_UTR | 7042549 | 7042968 | 7042549 | ID=Msa0346500-mRNA-1:three_prime_utr;Parent=Msa0346500-mRNA-1 |
| chr3_1 | three_prime_UTR | 7042126 | 7042463 | 7042126 | ID=Msa0346500-mRNA-1:three_prime_utr;Parent=Msa0346500-mRNA-1 |
| chr3_1 | three_prime_UTR | 7041954 | 7042039 | 7041954 | ID=Msa0346500-mRNA-1:three_prime_utr;Parent=Msa0346500-mRNA-1 |
| chr3_1 | three_prime_UTR | 7040645 | 7041016 | 7040645 | ID=Msa0346500-mRNA-1:three_prime_utr;Parent=Msa0346500-mRNA-1 |
| chr3_1 | three_prime_UTR | 7039807 | 7040533 | 7039807 | ID=Msa0346500-mRNA-1:three_prime_utr;Parent=Msa0346500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
