Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346480 | RHN77568.1 | 76.289 | 97 | 23 | 0 | 3 | 99 | 1 | 97 | 2.77e-48 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346480 | A0A396JMN0 | 76.289 | 97 | 23 | 0 | 3 | 99 | 1 | 97 | 1.32e-48 | 160 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0309770 | Msa0346480 | 0.807540 | 4.809210e-50 | -8.615850e-47 |
| Msa0346480 | Msa0346500 | 0.894304 | 2.797308e-75 | -8.615850e-47 |
| Msa0346480 | Msa0406200 | 0.802872 | 4.564216e-49 | -8.615850e-47 |
| Msa0346480 | Msa0451570 | 0.817010 | 4.116240e-52 | -8.615850e-47 |
| Msa0346480 | Msa0499410 | 0.865916 | 4.173526e-65 | -8.615850e-47 |
| Msa0346480 | Msa0698400 | 0.809252 | 2.074665e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0346480 | MtrunA17_Chr1g0156191 | 76.289 | 97 | 23 | 0 | 3 | 99 | 1 | 97 | 2.55e-52 | 160 |
| Msa0346480 | MtrunA17_Chr6g0473661 | 60.606 | 99 | 39 | 0 | 1 | 99 | 327 | 425 | 6.72e-44 | 148 |
| Msa0346480 | MtrunA17_Chr6g0462511 | 64.000 | 75 | 26 | 1 | 26 | 99 | 1 | 75 | 1.86e-29 | 102 |
| Msa0346480 | MtrunA17_Chr6g0473651 | 64.912 | 57 | 20 | 0 | 1 | 57 | 296 | 352 | 3.26e-22 | 88.6 |
| Msa0346480 | MtrunA17_Chr6g0473651 | 34.951 | 103 | 59 | 3 | 1 | 96 | 36 | 137 | 1.80e-15 | 70.1 |
| Msa0346480 | MtrunA17_Chr6g0473921 | 56.250 | 64 | 28 | 0 | 36 | 99 | 1 | 64 | 5.76e-21 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 244 sgRNAs with CRISPR-Local
Find 563 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAATATGGTGACTTTATT+TGG | -0.009467 | 3_1:-7022366 | Msa0346480:five_prime_UTR |
| AGCTCATTGCATGCTATTTC+TGG | 0.084782 | 3_1:-7023044 | Msa0346480:five_prime_UTR |
| AACTCATTGCATGCTATTTC+TGG | 0.111837 | 3_1:+7023199 | None:intergenic |
| CATCAAGGCCTCAAAGAAAT+TGG | 0.115736 | 3_1:-7022779 | Msa0346480:five_prime_UTR |
| CATCAAGGCCTCAAAGAAAT+TGG | 0.115736 | 3_1:+7023465 | None:intergenic |
| AATCGGATGCAAACTGATTT+TGG | 0.125062 | 3_1:-7022414 | Msa0346480:five_prime_UTR |
| CGATCCAACTTTGATATTAT+TGG | 0.150862 | 3_1:+7017968 | None:intergenic |
| CTATGAACATTGCTGATTTA+AGG | 0.160523 | 3_1:-7015489 | Msa0346480:three_prime_UTR |
| TGCCCAAGTTTGACAGTAAA+TGG | 0.204196 | 3_1:-7023145 | Msa0346480:five_prime_UTR |
| GCAACAAACGTAAATGAATT+AGG | 0.209048 | 3_1:-7023754 | Msa0346480:five_prime_UTR |
| ACCTCTACCTCATTATTTCT+TGG | 0.236080 | 3_1:+7018141 | None:intergenic |
| TAAGAATATATGTTTGGTTT+TGG | 0.238280 | 3_1:-7018210 | Msa0346480:five_prime_UTR |
| CGTGCGTTACAGCTAGCTTT+AGG | 0.262590 | 3_1:+7017583 | None:intergenic |
| TTCAACGGTCTCAAATCTTT+TGG | 0.264016 | 3_1:+7021907 | None:intergenic |
| GATTATGTCCTGGTGCTTGC+AGG | 0.264324 | 3_1:+7017518 | None:intergenic |
| CCAATATGGTGACTTTATTT+GGG | 0.265671 | 3_1:-7022365 | Msa0346480:five_prime_UTR |
| GTTCCCAAAGTGTTCATTCT+TGG | 0.270363 | 3_1:+7019524 | None:intergenic |
| TGCCTAACGGTGAGGGATTA+AGG | 0.275152 | 3_1:-7022197 | Msa0346480:five_prime_UTR |
| CATGGAAATTTCGAAGATTC+TGG | 0.281014 | 3_1:-7022130 | Msa0346480:five_prime_UTR |
| CACTGGACTCTCTTCCTAAC+TGG | 0.283570 | 3_1:+7015430 | None:intergenic |
| ATAGGAGGAACACATTTATT+AGG | 0.284579 | 3_1:+7016083 | None:intergenic |
| GATTTCTACAACATTGATAT+TGG | 0.285700 | 3_1:-7018060 | Msa0346480:five_prime_UTR |
| GTGCGTTACAGCTAGCTTTA+GGG | 0.286663 | 3_1:+7017584 | None:intergenic |
| TAGATCAGCAAGGATATATT+TGG | 0.290921 | 3_1:-7015806 | Msa0346480:CDS |
| CATCAAACCTATTTGTTCAT+AGG | 0.290954 | 3_1:+7018020 | None:intergenic |
| ACTCTTACCTATGAACAAAT+AGG | 0.305163 | 3_1:-7018027 | Msa0346480:five_prime_UTR |
| TGCTCTATTGTTTGTTCAAA+TGG | 0.315320 | 3_1:-7022470 | Msa0346480:five_prime_UTR |
| CACTCAAGTACTGTTAAACT+TGG | 0.316930 | 3_1:-7023101 | Msa0346480:five_prime_UTR |
| CAAGAACATGTTCGAGGTTA+AGG | 0.317039 | 3_1:-7016250 | Msa0346480:five_prime_UTR |
| AAAAGAAATCGTAAAATATT+CGG | 0.318803 | 3_1:+7015197 | None:intergenic |
| AGATTTGAGACCGTTGAAAA+AGG | 0.326177 | 3_1:-7021902 | Msa0346480:intron |
| AAAATGACAAGGTGTACTTC+AGG | 0.342171 | 3_1:-7016218 | Msa0346480:five_prime_UTR |
| TTGTCACTGATACAAATAGA+TGG | 0.346004 | 3_1:-7018253 | Msa0346480:five_prime_UTR |
| GGAATGGCATTCTTCATATA+AGG | 0.346620 | 3_1:-7015650 | Msa0346480:intron |
| TATGTCTTCAACTTTAATTA+TGG | 0.346926 | 3_1:-7023500 | Msa0346480:five_prime_UTR |
| GCAACAAACGTGAATGAATC+AGG | 0.348761 | 3_1:+7022490 | None:intergenic |
| CAGAGGCGTTAGGAAGGATT+TGG | 0.349208 | 3_1:-7018697 | Msa0346480:five_prime_UTR |
| GGATAGGGTTTAATTGGCCT+TGG | 0.350161 | 3_1:-7016188 | Msa0346480:five_prime_UTR |
| CAACAAACGTAAATGAATTA+GGG | 0.351153 | 3_1:-7023753 | Msa0346480:five_prime_UTR |
| GATCAAAGTCGTTGATTACT+TGG | 0.353170 | 3_1:-7017721 | Msa0346480:five_prime_UTR |
| CAACCATTTACTGTCAAACT+TGG | 0.355920 | 3_1:+7023142 | None:intergenic |
| GAATGGGTGGTTTGGCTTGA+AGG | 0.358568 | 3_1:-7018082 | Msa0346480:five_prime_UTR |
| ACCTCGAACATGTTCTTGTT+AGG | 0.359147 | 3_1:+7016255 | None:intergenic |
| GTTTAATTGGCCTTGGTGCA+TGG | 0.359621 | 3_1:-7016181 | Msa0346480:five_prime_UTR |
| GTGTGATATGGTATTCATTA+TGG | 0.361317 | 3_1:-7015781 | Msa0346480:CDS |
| ATGGTTGGATAGGGTTTAAT+TGG | 0.364384 | 3_1:-7016194 | Msa0346480:five_prime_UTR |
| GAGAAATTTCATCTGCTATA+CGG | 0.365583 | 3_1:+7017341 | None:intergenic |
| TTGATCTCAGTTTCCTTAGT+TGG | 0.368759 | 3_1:+7017738 | None:intergenic |
| TGCCTAGATGCTGCTGAGGC+AGG | 0.370072 | 3_1:-7017474 | Msa0346480:five_prime_UTR |
| CAAACAAATTTAAGACATCT+TGG | 0.370571 | 3_1:+7022854 | None:intergenic |
| CAAACAAATTTAAGACATCT+TGG | 0.370571 | 3_1:-7023390 | Msa0346480:five_prime_UTR |
| CCCAAATAAAGTCACCATAT+TGG | 0.371908 | 3_1:+7022365 | None:intergenic |
| TGACATCGACTCTGGATATC+TGG | 0.373468 | 3_1:-7015982 | Msa0346480:intron |
| CCTTTGCAGTGCATTCATAA+AGG | 0.376742 | 3_1:-7015523 | Msa0346480:three_prime_UTR |
| GTTTGATTATCATGCAGAAT+TGG | 0.378147 | 3_1:-7015292 | Msa0346480:three_prime_UTR |
| AAATAATGAGGTAGAGGTTC+GGG | 0.380132 | 3_1:-7018136 | Msa0346480:five_prime_UTR |
| ATGCATTAAGAATATATGTT+TGG | 0.381852 | 3_1:-7018216 | Msa0346480:five_prime_UTR |
| AGTATTTCTTTGAGTAGAAA+AGG | 0.384247 | 3_1:-7023269 | Msa0346480:five_prime_UTR |
| CCTGGTGCTTGCAGGGAATA+GGG | 0.384926 | 3_1:+7017526 | None:intergenic |
| TTCTTCAAGAATGGGTGGTT+TGG | 0.386728 | 3_1:-7018090 | Msa0346480:five_prime_UTR |
| AACAAAGTATTCTTCAAGAA+TGG | 0.387611 | 3_1:-7018099 | Msa0346480:five_prime_UTR |
| GGAGTGATCATCTTTGATAT+AGG | 0.388625 | 3_1:+7016065 | None:intergenic |
| AATTTGATGATCGATCTCTT+TGG | 0.393759 | 3_1:-7022670 | Msa0346480:five_prime_UTR |
| TTCAAAATCGGAGGTGGGTG+GGG | 0.397294 | 3_1:-7017645 | Msa0346480:five_prime_UTR |
| GCTCTATAGTTTGTGAAGTC+TGG | 0.397928 | 3_1:+7022102 | None:intergenic |
| ATCAAGGCCTCAAAGAAATT+GGG | 0.399448 | 3_1:-7022778 | Msa0346480:five_prime_UTR |
| ATCAAGGCCTCAAAGAAATT+GGG | 0.399448 | 3_1:+7023466 | None:intergenic |
| ATATATTTGGCAGTGTGATA+TGG | 0.407451 | 3_1:-7015793 | Msa0346480:CDS |
| GCCACTGCAGGCCTTTGCCT+TGG | 0.411177 | 3_1:-7017785 | Msa0346480:intron |
| AGAAGGTATGTGTCTTCATT+AGG | 0.413719 | 3_1:+7022805 | None:intergenic |
| AGAAGGTATGTGTCTTCATT+AGG | 0.413719 | 3_1:-7023439 | Msa0346480:five_prime_UTR |
| CAACATTGATATTGGTGCTT+GGG | 0.414236 | 3_1:-7018052 | Msa0346480:five_prime_UTR |
| TGTTAGACATCACACCAATA+TGG | 0.414754 | 3_1:-7022379 | Msa0346480:five_prime_UTR |
| TTTGAAGGATTGGAGGTGAC+TGG | 0.416212 | 3_1:-7015743 | Msa0346480:exon |
| AATGAATTGGTGTTCAAAAT+CGG | 0.418504 | 3_1:-7017657 | Msa0346480:five_prime_UTR |
| ACACAGGTCGTGTCTTGGTT+TGG | 0.420195 | 3_1:-7015876 | Msa0346480:intron |
| ATGGCTGAAGAGATTGATAT+TGG | 0.420995 | 3_1:-7022240 | Msa0346480:five_prime_UTR |
| ATCGCCATGCTGCCATCATT+TGG | 0.421002 | 3_1:+7016044 | None:intergenic |
| TCCTGGTGCTTGCAGGGAAT+AGG | 0.422432 | 3_1:+7017525 | None:intergenic |
| TCAAAGAAATTGGGTTTACT+TGG | 0.424015 | 3_1:-7022769 | Msa0346480:five_prime_UTR |
| TCAAAGAAATTGGGTTTACT+TGG | 0.424015 | 3_1:+7023475 | None:intergenic |
| TTGCTTGGAAGTGCTCATTT+CGG | 0.424691 | 3_1:-7017695 | Msa0346480:five_prime_UTR |
| ATTATTGGTGGAGTGCGATC+AGG | 0.427614 | 3_1:+7017983 | None:intergenic |
| AAGTAAACCCAATTTCTTTG+AGG | 0.431983 | 3_1:+7022771 | None:intergenic |
| AAGTAAACCCAATTTCTTTG+AGG | 0.431983 | 3_1:-7023473 | Msa0346480:five_prime_UTR |
| TTTAATTGGCCTTGGTGCAT+GGG | 0.432661 | 3_1:-7016180 | Msa0346480:five_prime_UTR |
| AATGTGATGGACGATCTCTT+TGG | 0.435057 | 3_1:+7023574 | None:intergenic |
| TACTTCAGGGATGGTTGGAT+AGG | 0.436595 | 3_1:-7016204 | Msa0346480:five_prime_UTR |
| CTTATGTGCAGCGCGTAACT+TGG | 0.437374 | 3_1:-7015715 | Msa0346480:three_prime_UTR |
| TTGGTGTGATGTCTAACATT+AGG | 0.439587 | 3_1:+7022384 | None:intergenic |
| TGGTGGATATGCTTCTTTGA+AGG | 0.442634 | 3_1:-7022450 | Msa0346480:five_prime_UTR |
| TGCACACAACGGTATGTTTG+AGG | 0.443354 | 3_1:+7023687 | None:intergenic |
| ACTTCTCGCAGTGCCCAGTT+AGG | 0.447865 | 3_1:-7015444 | Msa0346480:three_prime_UTR |
| TTAATGTCAATGTAGTTCAT+TGG | 0.450601 | 3_1:-7017942 | Msa0346480:five_prime_UTR |
| TCAACAGTTCAAGGCAATAC+TGG | 0.454484 | 3_1:-7018732 | Msa0346480:intron |
| TCAGAGTGCATTGCCAACTA+AGG | 0.455280 | 3_1:-7017751 | Msa0346480:five_prime_UTR |
| GAAATAATGAGGTAGAGGTT+CGG | 0.458277 | 3_1:-7018137 | Msa0346480:five_prime_UTR |
| TTGAGGCCTTGATGAAAAGA+AGG | 0.459610 | 3_1:+7022788 | None:intergenic |
| TTGAGGCCTTGATGAAAAGA+AGG | 0.459610 | 3_1:-7023456 | Msa0346480:five_prime_UTR |
| GCCTAGATGCTGCTGAGGCA+GGG | 0.460290 | 3_1:-7017473 | Msa0346480:five_prime_UTR |
| TTGTTCGCTTGTTCAAATGC+TGG | 0.461331 | 3_1:+7023781 | None:intergenic |
| GATAGCTGAATCACATTTGT+GGG | 0.464015 | 3_1:+7015834 | None:intergenic |
| TATGTCTTTAACTCTAAGTA+TGG | 0.464077 | 3_1:+7022744 | None:intergenic |
| ATGTATAATTAAAGAGCAAA+TGG | 0.464309 | 3_1:-7015069 | Msa0346480:three_prime_UTR |
| TGCAGGCCTTTGCCTTGGTT+AGG | 0.464944 | 3_1:-7017780 | Msa0346480:intron |
| TCCACCAATAATATCAAAGT+TGG | 0.465101 | 3_1:-7017972 | Msa0346480:five_prime_UTR |
| ACAAAGTATTCTTCAAGAAT+GGG | 0.467715 | 3_1:-7018098 | Msa0346480:five_prime_UTR |
| TGATTTAAGGCATGTGTACC+AGG | 0.468839 | 3_1:-7015476 | Msa0346480:three_prime_UTR |
| TCCAACTTTGATATTATTGG+TGG | 0.470413 | 3_1:+7017971 | None:intergenic |
| TAGACAGTTCTAGCACTAGA+AGG | 0.472435 | 3_1:+7022922 | None:intergenic |
| ACAACATTGATATTGGTGCT+TGG | 0.474591 | 3_1:-7018053 | Msa0346480:five_prime_UTR |
| GATTGCGCAATATATATTGC+AGG | 0.475133 | 3_1:-7022173 | Msa0346480:five_prime_UTR |
| TGAAACCAAATAAAATAACT+TGG | 0.477785 | 3_1:-7022287 | Msa0346480:five_prime_UTR |
| TTGATTACTTGGGATTTGCT+TGG | 0.481601 | 3_1:-7017710 | Msa0346480:five_prime_UTR |
| CTGGGCACTGCGAGAAGTAA+TGG | 0.484915 | 3_1:+7015449 | None:intergenic |
| GATCTCAAGCTCCACGTAGT+AGG | 0.487112 | 3_1:+7017294 | None:intergenic |
| ACTTCAGGGATGGTTGGATA+GGG | 0.487995 | 3_1:-7016203 | Msa0346480:five_prime_UTR |
| AATGCTGGACGCTTCTTCAA+AGG | 0.489685 | 3_1:+7023796 | None:intergenic |
| CAGAATCTTCGAAATTTCCA+TGG | 0.491616 | 3_1:+7022131 | None:intergenic |
| CTTAAACACAGGTCGTGTCT+TGG | 0.494570 | 3_1:-7015881 | Msa0346480:intron |
| AGGGAATAGGGACATGCCTC+AGG | 0.494745 | 3_1:+7017538 | None:intergenic |
| GAAGCTGTTTCGCGAAGCAT+TGG | 0.497137 | 3_1:-7023838 | Msa0346480:five_prime_UTR |
| CCCTATTCCCTGCAAGCACC+AGG | 0.497957 | 3_1:-7017526 | Msa0346480:five_prime_UTR |
| GTTCAAAATCGGAGGTGGGT+GGG | 0.498607 | 3_1:-7017646 | Msa0346480:five_prime_UTR |
| CCATGGGCTTGATTATGTCC+TGG | 0.501232 | 3_1:+7017508 | None:intergenic |
| TCATGCACTGTTACAGTCAC+TGG | 0.501817 | 3_1:+7022642 | None:intergenic |
| AGACAGATCAGGAGTGGAAG+TGG | 0.502826 | 3_1:-7016111 | Msa0346480:CDS |
| CACATTATTGCAAAGCCCAC+TGG | 0.502855 | 3_1:+7015413 | None:intergenic |
| CATAAGGTTTGATTCTACAT+AGG | 0.503823 | 3_1:+7016148 | None:intergenic |
| CTCGCGACTGTAACAGTGCA+TGG | 0.504182 | 3_1:+7023602 | None:intergenic |
| GAGCCAAGAATGAACACTTT+GGG | 0.504993 | 3_1:-7019527 | Msa0346480:five_prime_UTR |
| AGAGCCAAGAATGAACACTT+TGG | 0.505329 | 3_1:-7019528 | Msa0346480:five_prime_UTR |
| ACATCTTCTGACATCGACTC+TGG | 0.507031 | 3_1:-7015990 | Msa0346480:CDS |
| TGTCGAGGCAGAAAATGAAT+TGG | 0.513746 | 3_1:-7017670 | Msa0346480:five_prime_UTR |
| GGCCTCTTTCCTTTCATCCG+TGG | 0.514138 | 3_1:+7021928 | None:intergenic |
| GGGAGATTGACAGAGGCGTT+AGG | 0.515400 | 3_1:-7018707 | Msa0346480:five_prime_UTR |
| GTATTTCTTTGAGTAGAAAA+GGG | 0.515693 | 3_1:-7023268 | Msa0346480:five_prime_UTR |
| ATATCGCACCAGCAGCTTCA+CGG | 0.517086 | 3_1:+7019481 | None:intergenic |
| ACTGCATCTGATGTTAACTC+TGG | 0.517762 | 3_1:-7017890 | Msa0346480:five_prime_UTR |
| AAGATGATCACTCCAAATGA+TGG | 0.517981 | 3_1:-7016056 | Msa0346480:CDS |
| ACCCTGCCTCAGCAGCATCT+AGG | 0.519643 | 3_1:+7017472 | None:intergenic |
| CTCCTTAATCCCTCACCGTT+AGG | 0.520920 | 3_1:+7022195 | None:intergenic |
| ATCAAAGTCGTTGATTACTT+GGG | 0.521003 | 3_1:-7017720 | Msa0346480:five_prime_UTR |
| CAAGTTTAACAGTACTTGAG+TGG | 0.521115 | 3_1:+7023102 | None:intergenic |
| TTACAGCTAGCTTTAGGGGA+TGG | 0.523709 | 3_1:+7017589 | None:intergenic |
| ATTATGTCCTGGTGCTTGCA+GGG | 0.524628 | 3_1:+7017519 | None:intergenic |
| AAATGACAAGGTGTACTTCA+GGG | 0.525531 | 3_1:-7016217 | Msa0346480:five_prime_UTR |
| GGCATGAACTGACCATCACT+CGG | 0.526907 | 3_1:+7021949 | None:intergenic |
| AGATAGCTGAATCACATTTG+TGG | 0.527393 | 3_1:+7015833 | None:intergenic |
| CAATATGGTGACTTTATTTG+GGG | 0.531394 | 3_1:-7022364 | Msa0346480:five_prime_UTR |
| TAATGTATGTTTGTGTGTCA+TGG | 0.533597 | 3_1:-7015268 | Msa0346480:three_prime_UTR |
| CAGTTCATGCCACGGATGAA+AGG | 0.533808 | 3_1:-7021937 | Msa0346480:five_prime_UTR |
| GATCTCTTTGCAAGGCGCGT+AGG | 0.536164 | 3_1:-7017623 | Msa0346480:five_prime_UTR |
| TCAGTGACAAAGTAAGTAGC+AGG | 0.536522 | 3_1:+7018266 | None:intergenic |
| AAGGTTTCGAGCTATTCAAT+CGG | 0.537802 | 3_1:-7022431 | Msa0346480:five_prime_UTR |
| GATGATCGATCTCTTTGGAA+AGG | 0.543014 | 3_1:-7022665 | Msa0346480:five_prime_UTR |
| TATATCTGAAGGCTTGTCAT+TGG | 0.544895 | 3_1:+7022699 | None:intergenic |
| TCCAAGAAATAATGAGGTAG+AGG | 0.546351 | 3_1:-7018142 | Msa0346480:five_prime_UTR |
| TAAAAGATTGAATAAGATGA+CGG | 0.550132 | 3_1:+7015150 | None:intergenic |
| AGTAAATTGCCTAACGGTGA+GGG | 0.552096 | 3_1:-7022204 | Msa0346480:five_prime_UTR |
| ATGACCATAAAAGACAGATC+AGG | 0.552829 | 3_1:-7016122 | Msa0346480:CDS |
| ACTGGACTCTCTTCCTAACT+GGG | 0.553386 | 3_1:+7015431 | None:intergenic |
| GCAATCCTTTCCCCGAGTGA+TGG | 0.556379 | 3_1:-7021961 | Msa0346480:five_prime_UTR |
| GAGTTCAATGAGTCAAAGAC+AGG | 0.557905 | 3_1:-7023181 | Msa0346480:five_prime_UTR |
| GAGCTCAAAGAGTCAAAGAC+AGG | 0.558436 | 3_1:+7023062 | None:intergenic |
| AACCATTTACTGTCAAACTT+GGG | 0.559989 | 3_1:+7023143 | None:intergenic |
| TGTCACTGATACAAATAGAT+GGG | 0.566640 | 3_1:-7018252 | Msa0346480:five_prime_UTR |
| GTCAAGGACCGTGAAGCTGC+TGG | 0.569242 | 3_1:-7019489 | Msa0346480:five_prime_UTR |
| CACAGAACAAGATTCAGCCA+TGG | 0.569963 | 3_1:-7023875 | Msa0346480:five_prime_UTR |
| TTGCTGTCACCGAAAATACA+AGG | 0.570074 | 3_1:-7015671 | Msa0346480:three_prime_UTR |
| TGCGTTACAGCTAGCTTTAG+GGG | 0.570487 | 3_1:+7017585 | None:intergenic |
| GATTGACAGAGGCGTTAGGA+AGG | 0.571222 | 3_1:-7018703 | Msa0346480:five_prime_UTR |
| TGTTCAAAATCGGAGGTGGG+TGG | 0.571285 | 3_1:-7017647 | Msa0346480:five_prime_UTR |
| GTGATCATCTTTGATATAGG+AGG | 0.572297 | 3_1:+7016068 | None:intergenic |
| CAGTTCAAGGCAATACTGGT+GGG | 0.572471 | 3_1:-7018728 | Msa0346480:five_prime_UTR |
| GTTGCTTTCGTGTGTTGACA+TGG | 0.572625 | 3_1:-7022259 | Msa0346480:five_prime_UTR |
| GACAGTAAATGGTTGAACCT+TGG | 0.573277 | 3_1:-7023134 | Msa0346480:five_prime_UTR |
| TCCTAACAAGAACATGTTCG+AGG | 0.576589 | 3_1:-7016256 | Msa0346480:five_prime_UTR |
| CAACAAACGTGAATGAATCA+GGG | 0.580010 | 3_1:+7022491 | None:intergenic |
| AAGTATTCTTCAAGAATGGG+TGG | 0.580631 | 3_1:-7018095 | Msa0346480:five_prime_UTR |
| CAGTAAATTGCCTAACGGTG+AGG | 0.583046 | 3_1:-7022205 | Msa0346480:five_prime_UTR |
| CACTCCAAATGATGGCAGCA+TGG | 0.583679 | 3_1:-7016048 | Msa0346480:CDS |
| AGGTGTACTTCAGGGATGGT+TGG | 0.586413 | 3_1:-7016209 | Msa0346480:five_prime_UTR |
| ACTGACCATCACTCGGGGAA+AGG | 0.587693 | 3_1:+7021956 | None:intergenic |
| TCAAAGAGTCAAAGACAGGT+TGG | 0.591134 | 3_1:+7023066 | None:intergenic |
| TTGGTGTTCAAAATCGGAGG+TGG | 0.594982 | 3_1:-7017651 | Msa0346480:five_prime_UTR |
| GAAACCAAATAAAATAACTT+GGG | 0.597988 | 3_1:-7022286 | Msa0346480:five_prime_UTR |
| GTCACCGAAAATACAAGGAA+TGG | 0.598252 | 3_1:-7015666 | Msa0346480:three_prime_UTR |
| GCATGAACTGACCATCACTC+GGG | 0.599634 | 3_1:+7021950 | None:intergenic |
| ATGTGATCCAAGAAATAATG+AGG | 0.600386 | 3_1:-7018148 | Msa0346480:five_prime_UTR |
| TTATTGGTGGAGTGCGATCA+GGG | 0.603849 | 3_1:+7017984 | None:intergenic |
| GAACTTTACTATGTGTGTCA+AGG | 0.604975 | 3_1:-7019505 | Msa0346480:five_prime_UTR |
| TCTATTGTTTGTTCAAATGG+TGG | 0.605540 | 3_1:-7022467 | Msa0346480:five_prime_UTR |
| TTCATTCTGCATCAAAACCA+TGG | 0.605765 | 3_1:+7023858 | None:intergenic |
| TCAATGAGTCAAAGACAGGT+TGG | 0.606266 | 3_1:-7023177 | Msa0346480:five_prime_UTR |
| CCAGGACATAATCAAGCCCA+TGG | 0.607425 | 3_1:-7017508 | Msa0346480:five_prime_UTR |
| TGGGTGGGGATCTCTTTGCA+AGG | 0.608753 | 3_1:-7017631 | Msa0346480:five_prime_UTR |
| TATAATTAAAGAGCAAATGG+TGG | 0.609006 | 3_1:-7015066 | Msa0346480:three_prime_UTR |
| TAGACAGTTCTAGCACTACA+AGG | 0.610370 | 3_1:-7023322 | Msa0346480:five_prime_UTR |
| CCTTTATGAATGCACTGCAA+AGG | 0.610680 | 3_1:+7015523 | None:intergenic |
| CATAAAAGACAGATCAGGAG+TGG | 0.611114 | 3_1:-7016117 | Msa0346480:CDS |
| ATGAACAAATAGGTTTGATG+AGG | 0.613403 | 3_1:-7018017 | Msa0346480:five_prime_UTR |
| TTAACTTTCGAACTTTCACA+TGG | 0.614404 | 3_1:-7018674 | Msa0346480:five_prime_UTR |
| GATGGACGATCTCTTTGGAA+AGG | 0.614788 | 3_1:+7023579 | None:intergenic |
| GCGAGAAGTAATGGTTAACC+TGG | 0.615011 | 3_1:+7015458 | None:intergenic |
| ACAGTTCAAGGCAATACTGG+TGG | 0.616471 | 3_1:-7018729 | Msa0346480:intron |
| TCGCGACTGTAACAGTGCAT+GGG | 0.618955 | 3_1:+7023603 | None:intergenic |
| GACAAGGTGTACTTCAGGGA+TGG | 0.620028 | 3_1:-7016213 | Msa0346480:five_prime_UTR |
| AGTTAGGAAGAGAGTCCAGT+GGG | 0.621104 | 3_1:-7015428 | Msa0346480:three_prime_UTR |
| AGTTTGCCTAGATGCTGCTG+AGG | 0.622272 | 3_1:-7017478 | Msa0346480:five_prime_UTR |
| GCAGCGCGTAACTTGGTCAA+AGG | 0.623770 | 3_1:-7015708 | Msa0346480:three_prime_UTR |
| TGCCACGGATGAAAGGAAAG+AGG | 0.627393 | 3_1:-7021930 | Msa0346480:five_prime_UTR |
| TGGTGTTCAAAATCGGAGGT+GGG | 0.630322 | 3_1:-7017650 | Msa0346480:five_prime_UTR |
| GTGCTCATTTCGGATTGTCG+AGG | 0.634872 | 3_1:-7017685 | Msa0346480:five_prime_UTR |
| AATATGGTGACTTTATTTGG+GGG | 0.635805 | 3_1:-7022363 | Msa0346480:five_prime_UTR |
| GTGCTAGAACTGTCTATGTG+TGG | 0.636362 | 3_1:+7023329 | None:intergenic |
| AAGAAGCCATATATAAAACA+TGG | 0.639660 | 3_1:+7015324 | None:intergenic |
| CAAAATCCTAACCAAGGCAA+AGG | 0.639704 | 3_1:+7017774 | None:intergenic |
| AACAAACGTAAATGAATTAG+GGG | 0.640899 | 3_1:-7023752 | Msa0346480:five_prime_UTR |
| ACTCAAGTACTGTTAAACTT+GGG | 0.641375 | 3_1:-7023100 | Msa0346480:five_prime_UTR |
| ATAATGTGTGCTAGAAGACA+TGG | 0.641736 | 3_1:-7015398 | Msa0346480:three_prime_UTR |
| GTGCTAGAACTGTCTATGTG+TGG | 0.643394 | 3_1:-7022915 | Msa0346480:five_prime_UTR |
| AGTTCAAGGCAATACTGGTG+GGG | 0.645677 | 3_1:-7018727 | Msa0346480:five_prime_UTR |
| GTGATGGTCAGTTCATGCCA+CGG | 0.650338 | 3_1:-7021945 | Msa0346480:five_prime_UTR |
| ATAATATCAAAGTTGGATCG+TGG | 0.651260 | 3_1:-7017965 | Msa0346480:five_prime_UTR |
| TAGATCTGAAGGCTTGTCGT+TGG | 0.651266 | 3_1:-7023545 | Msa0346480:five_prime_UTR |
| GAATTGGTGTTCAAAATCGG+AGG | 0.651998 | 3_1:-7017654 | Msa0346480:five_prime_UTR |
| CTCTGACAAAATCCTAACCA+AGG | 0.653052 | 3_1:+7017768 | None:intergenic |
| TTGAGTGGATTGAATCACCA+AGG | 0.661468 | 3_1:+7023117 | None:intergenic |
| GGTGCGATATGTTTGATGAA+AGG | 0.666358 | 3_1:-7019468 | Msa0346480:intron |
| CAGTTAGGAAGAGAGTCCAG+TGG | 0.670342 | 3_1:-7015429 | Msa0346480:three_prime_UTR |
| AGAACAAAGTTGTCTACCTG+AGG | 0.673391 | 3_1:-7017554 | Msa0346480:five_prime_UTR |
| AACAAACGTGAATGAATCAG+GGG | 0.682281 | 3_1:+7022492 | None:intergenic |
| GCAAACAGTAAATTGCCTAA+CGG | 0.689862 | 3_1:-7022210 | Msa0346480:five_prime_UTR |
| TAATGCTGACCCATGCACCA+AGG | 0.690450 | 3_1:+7016171 | None:intergenic |
| CATGAACTGACCATCACTCG+GGG | 0.698036 | 3_1:+7021951 | None:intergenic |
| CTATCTATCATAGATCAGCA+AGG | 0.700041 | 3_1:-7015816 | Msa0346480:CDS |
| AAAGCTAGCTGTAACGCACG+AGG | 0.709573 | 3_1:-7017580 | Msa0346480:five_prime_UTR |
| GTCTTGGTTTGGTTTCTGCG+AGG | 0.718724 | 3_1:-7015865 | Msa0346480:CDS |
| ACTGGTGGGGAGATTGACAG+AGG | 0.726497 | 3_1:-7018714 | Msa0346480:five_prime_UTR |
| CTATTTCTGGAAGATCACAG+TGG | 0.747490 | 3_1:-7023031 | Msa0346480:five_prime_UTR |
| CTATTTCTGGAAGATCACAG+TGG | 0.747490 | 3_1:+7023212 | None:intergenic |
| AAAGTTGAATACCTACTACG+TGG | 0.752448 | 3_1:-7017305 | Msa0346480:five_prime_UTR |
| TATTCCTTAGCAAAACACGA+CGG | 0.776301 | 3_1:+7016315 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCTAAGATATATTTAAA+AGG | + | chr3_1:7017796-7017815 | None:intergenic | 10.0% |
| !!! | TAGATTAATTAGATTATTTT+TGG | - | chr3_1:7017809-7017828 | Msa0346480:intron | 10.0% |
| !!! | TAGATTAATTAGATTATTTT+TGG | - | chr3_1:7017809-7017828 | Msa0346480:intron | 10.0% |
| !! | ATATAATCAAACAATATAAA+AGG | + | chr3_1:7021101-7021120 | None:intergenic | 10.0% |
| !! | TTTATGTGCATATTATTATT+AGG | + | chr3_1:7016941-7016960 | None:intergenic | 15.0% |
| !!! | TTTTATAATATTAAGATCCA+TGG | + | chr3_1:7018887-7018906 | None:intergenic | 15.0% |
| !! | TTGTTTAATACATTAACATA+TGG | - | chr3_1:7020000-7020019 | Msa0346480:intron | 15.0% |
| !! | CAAATAAGAATAAAAACTAA+CGG | + | chr3_1:7020181-7020200 | None:intergenic | 15.0% |
| !!! | AAATTTTTTGTTAACATGAA+TGG | - | chr3_1:7020449-7020468 | Msa0346480:intron | 15.0% |
| !!! | AATTTTTTGTTAACATGAAT+GGG | - | chr3_1:7020450-7020469 | Msa0346480:intron | 15.0% |
| !! | AACTCATCATAAAAAAAAAA+TGG | + | chr3_1:7020538-7020557 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTATGATGAGTT+TGG | - | chr3_1:7020538-7020557 | Msa0346480:intron | 15.0% |
| !! | AGAAATCAGTTTATAAATTA+TGG | + | chr3_1:7021930-7021949 | None:intergenic | 15.0% |
| !!! | ATAATTTATAAACTGATTTC+TGG | - | chr3_1:7021929-7021948 | Msa0346480:five_prime_UTR | 15.0% |
| !!! | ATTTTATAAAAACTAATGTG+CGG | - | chr3_1:7022124-7022143 | Msa0346480:five_prime_UTR | 15.0% |
| !! | TAAGAAAATATATATCAGTT+AGG | - | chr3_1:7022184-7022203 | Msa0346480:five_prime_UTR | 15.0% |
| !! | TTAAAATCATATCCAAAATA+AGG | + | chr3_1:7022313-7022332 | None:intergenic | 15.0% |
| !!! | AACTTACTTATTTTTGAAAT+AGG | - | chr3_1:7022331-7022350 | Msa0346480:five_prime_UTR | 15.0% |
| !!! | ATATTTTAGAATCTTGATTA+TGG | - | chr3_1:7023024-7023043 | Msa0346480:five_prime_UTR | 15.0% |
| !! | AAAAGAAATCGTAAAATATT+CGG | + | chr3_1:7023757-7023776 | None:intergenic | 15.0% |
| !!! | TTACGATTTCTTTTAAATTA+AGG | - | chr3_1:7023763-7023782 | Msa0346480:five_prime_UTR | 15.0% |
| !!! | ATACATATTTTTCTCTTTGA+TGG | - | chr3_1:7015313-7015332 | Msa0346480:three_prime_UTR | 20.0% |
| !! | TATGTCTTCAACTTTAATTA+TGG | - | chr3_1:7015451-7015470 | Msa0346480:three_prime_UTR | 20.0% |
| !!! | AAATTTTTGCATATATCTGA+AGG | + | chr3_1:7016266-7016285 | None:intergenic | 20.0% |
| !!! | ATACATATTTTTCTCTTTGA+TGG | + | chr3_1:7015313-7015332 | None:intergenic | 20.0% |
| !! | AAGAGAAAAATATGTATTTG+TGG | - | chr3_1:7016351-7016370 | Msa0346480:intron | 20.0% |
| !! | AGAGAAAAATATGTATTTGT+GGG | - | chr3_1:7016352-7016371 | Msa0346480:intron | 20.0% |
| !! | TGAAACCAAATAAAATAACT+TGG | - | chr3_1:7016664-7016683 | Msa0346480:intron | 20.0% |
| !! | GAAACCAAATAAAATAACTT+GGG | - | chr3_1:7016665-7016684 | Msa0346480:intron | 20.0% |
| !!! | TGTTATTTAACATTAGGAAT+TGG | + | chr3_1:7017387-7017406 | None:intergenic | 20.0% |
| !!! | AACAGATGTTATTTAACATT+AGG | + | chr3_1:7017393-7017412 | None:intergenic | 20.0% |
| !!! | TCATTTTTTCAATTTAAACC+CGG | + | chr3_1:7018994-7019013 | None:intergenic | 20.0% |
| !! | AGTCATATTTGAATTATCAA+TGG | + | chr3_1:7019574-7019593 | None:intergenic | 20.0% |
| !!! | TGTATTTTTTATCTCATGAA+AGG | - | chr3_1:7019644-7019663 | Msa0346480:intron | 20.0% |
| !! | AAAAGATTTCATGATATAAG+AGG | + | chr3_1:7019744-7019763 | None:intergenic | 20.0% |
| !!! | TGTATTTTTTATCTCATGAA+AGG | - | chr3_1:7019644-7019663 | Msa0346480:intron | 20.0% |
| !! | TTAGTGTAATACATGTATAT+TGG | - | chr3_1:7020488-7020507 | Msa0346480:intron | 20.0% |
| !! | AAAATGGATCATACATTAAA+TGG | + | chr3_1:7020522-7020541 | None:intergenic | 20.0% |
| !! | TCATTAATCTACATCAAATA+GGG | + | chr3_1:7020656-7020675 | None:intergenic | 20.0% |
| !! | ATCATTAATCTACATCAAAT+AGG | + | chr3_1:7020657-7020676 | None:intergenic | 20.0% |
| !! | ATGCATTAAGAATATATGTT+TGG | - | chr3_1:7020735-7020754 | Msa0346480:intron | 20.0% |
| !!! | TAAGAATATATGTTTGGTTT+TGG | - | chr3_1:7020741-7020760 | Msa0346480:intron | 20.0% |
| !! | AAATAAAATGCAAACTTCTT+TGG | + | chr3_1:7021747-7021766 | None:intergenic | 20.0% |
| !! | TTATCCTAAATAAACAAAGT+TGG | - | chr3_1:7021836-7021855 | Msa0346480:intron | 20.0% |
| !! | TATCCTAAATAAACAAAGTT+GGG | - | chr3_1:7021837-7021856 | Msa0346480:intron | 20.0% |
| !! | TTAAGAATGCATCAATTATA+CGG | + | chr3_1:7022552-7022571 | None:intergenic | 20.0% |
| !! | CCTATGAATATAATATGAAA+CGG | + | chr3_1:7023001-7023020 | None:intergenic | 20.0% |
| !!! | CAGATAATACTATATTTTGA+AGG | - | chr3_1:7023193-7023212 | Msa0346480:five_prime_UTR | 20.0% |
| !!! | AATACTATATTTTGAAGGAT+TGG | - | chr3_1:7023198-7023217 | Msa0346480:five_prime_UTR | 20.0% |
| !! | TAAAAGATTGAATAAGATGA+CGG | + | chr3_1:7023804-7023823 | None:intergenic | 20.0% |
| !! | ATGTATAATTAAAGAGCAAA+TGG | - | chr3_1:7023882-7023901 | Msa0346480:five_prime_UTR | 20.0% |
| ! | CAACAAACGTAAATGAATTA+GGG | - | chr3_1:7015198-7015217 | Msa0346480:three_prime_UTR | 25.0% |
| ! | AACAAACGTAAATGAATTAG+GGG | - | chr3_1:7015199-7015218 | Msa0346480:three_prime_UTR | 25.0% |
| ! | AAGAGAAAAATATGTATTCG+TGG | + | chr3_1:7015310-7015329 | None:intergenic | 25.0% |
| !! | CAAACAAATTTAAGACATCT+TGG | - | chr3_1:7015561-7015580 | Msa0346480:intron | 25.0% |
| ! | AGTATTTCTTTGAGTAGAAA+AGG | - | chr3_1:7015682-7015701 | Msa0346480:three_prime_UTR | 25.0% |
| ! | GTATTTCTTTGAGTAGAAAA+GGG | - | chr3_1:7015683-7015702 | Msa0346480:three_prime_UTR | 25.0% |
| !! | CAAACAAATTTAAGACATCT+TGG | + | chr3_1:7015561-7015580 | None:intergenic | 25.0% |
| ! | TATGTCTTTAACTCTAAGTA+TGG | + | chr3_1:7016210-7016229 | None:intergenic | 25.0% |
| !!! | ACTTCCCAAGTTATTTTATT+TGG | + | chr3_1:7016672-7016691 | None:intergenic | 25.0% |
| ! | AAACTTTATTCTCAACAGAT+TGG | - | chr3_1:7016959-7016978 | Msa0346480:intron | 25.0% |
| ! | AACTTTATTCTCAACAGATT+GGG | - | chr3_1:7016960-7016979 | Msa0346480:intron | 25.0% |
| !! | AATTTTACAATTTCGTGCAA+GGG | - | chr3_1:7017117-7017136 | Msa0346480:intron | 25.0% |
| !! | TTTTTCTACTTTGTTACTAG+TGG | - | chr3_1:7017165-7017184 | Msa0346480:intron | 25.0% |
| !!! | TACCGGTAAATTTTTTATGT+CGG | + | chr3_1:7017741-7017760 | None:intergenic | 25.0% |
| ! | ATCCACTAACTTATTAACAT+TGG | + | chr3_1:7017840-7017859 | None:intergenic | 25.0% |
| ! | AAGATATATTATTGCTGTGT+AGG | + | chr3_1:7017938-7017957 | None:intergenic | 25.0% |
| ! | ATCCACTAACTTATTAACAT+TGG | + | chr3_1:7017840-7017859 | None:intergenic | 25.0% |
| ! | AACTTCAGTGTTAGATTATA+TGG | - | chr3_1:7018228-7018247 | Msa0346480:five_prime_UTR | 25.0% |
| !!! | CTGAACTATTTTCTAAAACT+CGG | + | chr3_1:7018322-7018341 | None:intergenic | 25.0% |
| !! | TGCACAAAATCTTTTTACTA+CGG | + | chr3_1:7018426-7018445 | None:intergenic | 25.0% |
| !!! | TTAGTTTTAGTTCCAGTATA+GGG | + | chr3_1:7018602-7018621 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTAGTTCCAGTAT+AGG | + | chr3_1:7018603-7018622 | None:intergenic | 25.0% |
| ! | ATACTGGAACTAAAACTAAT+TGG | - | chr3_1:7018603-7018622 | Msa0346480:intron | 25.0% |
| ! | TACTGGAACTAAAACTAATT+GGG | - | chr3_1:7018604-7018623 | Msa0346480:intron | 25.0% |
| ! | AAGTCAAATGGAAATCTAAA+TGG | + | chr3_1:7018686-7018705 | None:intergenic | 25.0% |
| !!! | ATTTGCTACATTTTCAAATC+TGG | + | chr3_1:7018772-7018791 | None:intergenic | 25.0% |
| ! | TATAATATTAAGATCCATGG+TGG | + | chr3_1:7018884-7018903 | None:intergenic | 25.0% |
| !! | TAAGAATTGCTGGTTAAATT+GGG | + | chr3_1:7018959-7018978 | None:intergenic | 25.0% |
| !! | ATAAGAATTGCTGGTTAAAT+TGG | + | chr3_1:7018960-7018979 | None:intergenic | 25.0% |
| ! | AATTTAACCAGCAATTCTTA+TGG | - | chr3_1:7018959-7018978 | Msa0346480:intron | 25.0% |
| !!! | CATTTTTTCAATTTAAACCC+GGG | + | chr3_1:7018993-7019012 | None:intergenic | 25.0% |
| ! | TTTGTCTTTCTATTTAAGTG+AGG | - | chr3_1:7019349-7019368 | Msa0346480:intron | 25.0% |
| ! | ACATTAACATATGGACATTA+TGG | - | chr3_1:7020009-7020028 | Msa0346480:intron | 25.0% |
| ! | CATTAATCTACATCAAATAG+GGG | + | chr3_1:7020655-7020674 | None:intergenic | 25.0% |
| !!! | ATATATGTTTGGTTTTGGAA+AGG | - | chr3_1:7020746-7020765 | Msa0346480:intron | 25.0% |
| !! | AACAAAGTATTCTTCAAGAA+TGG | - | chr3_1:7020852-7020871 | Msa0346480:intron | 25.0% |
| !! | ACAAAGTATTCTTCAAGAAT+GGG | - | chr3_1:7020853-7020872 | Msa0346480:intron | 25.0% |
| ! | GATTTCTACAACATTGATAT+TGG | - | chr3_1:7020891-7020910 | Msa0346480:intron | 25.0% |
| ! | TTAATGTCAATGTAGTTCAT+TGG | - | chr3_1:7021009-7021028 | Msa0346480:intron | 25.0% |
| !! | AATGAATTGGTGTTCAAAAT+CGG | - | chr3_1:7021294-7021313 | Msa0346480:intron | 25.0% |
| !! | AACAAAACCAAATACCTTTT+GGG | + | chr3_1:7021509-7021528 | None:intergenic | 25.0% |
| !! | AAACAAAACCAAATACCTTT+TGG | + | chr3_1:7021510-7021529 | None:intergenic | 25.0% |
| !! | TATGCATTTTCTCAATTGAA+TGG | + | chr3_1:7021701-7021720 | None:intergenic | 25.0% |
| !! | ATTCCCAACTTTGTTTATTT+AGG | + | chr3_1:7021843-7021862 | None:intergenic | 25.0% |
| !! | ATTTATAAACTGATTTCTGG+AGG | - | chr3_1:7021932-7021951 | Msa0346480:five_prime_UTR | 25.0% |
| !!! | TTAAGCTTTAAGTAATAGCA+GGG | + | chr3_1:7022167-7022186 | None:intergenic | 25.0% |
| !!! | GAATCTCTGCAATATTTTTA+AGG | - | chr3_1:7022206-7022225 | Msa0346480:five_prime_UTR | 25.0% |
| ! | TGTACCATGAATAGAAATTA+AGG | + | chr3_1:7022382-7022401 | None:intergenic | 25.0% |
| !! | ATAACTAATTAGTTTCGGAA+TGG | + | chr3_1:7022478-7022497 | None:intergenic | 25.0% |
| ! | TAAGAATGCATCAATTATAC+GGG | + | chr3_1:7022551-7022570 | None:intergenic | 25.0% |
| ! | ATACATAAAAAACATGTCGT+CGG | + | chr3_1:7022594-7022613 | None:intergenic | 25.0% |
| ! | TTTATGTATATATCAGCTGA+AGG | - | chr3_1:7022605-7022624 | Msa0346480:five_prime_UTR | 25.0% |
| ! | CCGTTTCATATTATATTCAT+AGG | - | chr3_1:7022998-7023017 | Msa0346480:five_prime_UTR | 25.0% |
| ! | AAGAAGCCATATATAAAACA+TGG | + | chr3_1:7023630-7023649 | None:intergenic | 25.0% |
| !! | ATTGATGCTAAGTTTTTGTT+TGG | - | chr3_1:7023715-7023734 | Msa0346480:five_prime_UTR | 25.0% |
| GCAACAAACGTAAATGAATT+AGG | - | chr3_1:7015197-7015216 | Msa0346480:three_prime_UTR | 30.0% | |
| AGATCTATGCAAAAATGTGA+TGG | + | chr3_1:7015393-7015412 | None:intergenic | 30.0% | |
| ! | ACATTTTTGCATAGATCTGA+AGG | - | chr3_1:7015395-7015414 | Msa0346480:three_prime_UTR | 30.0% |
| TCAAAGAAATTGGGTTTACT+TGG | + | chr3_1:7016182-7016201 | None:intergenic | 30.0% | |
| AAGTAAACCCAATTTCTTTG+AGG | - | chr3_1:7015478-7015497 | Msa0346480:three_prime_UTR | 30.0% | |
| AACCATTTACTGTCAAACTT+GGG | + | chr3_1:7015811-7015830 | None:intergenic | 30.0% | |
| ! | ACTCAAGTACTGTTAAACTT+GGG | - | chr3_1:7015851-7015870 | Msa0346480:CDS | 30.0% |
| AAGTAAACCCAATTTCTTTG+AGG | + | chr3_1:7015478-7015497 | None:intergenic | 30.0% | |
| TCAAAGAAATTGGGTTTACT+TGG | - | chr3_1:7016182-7016201 | Msa0346480:five_prime_UTR | 30.0% | |
| ! | AATTTGATGATCGATCTCTT+TGG | - | chr3_1:7016281-7016300 | Msa0346480:five_prime_UTR | 30.0% |
| TGCTCTATTGTTTGTTCAAA+TGG | - | chr3_1:7016481-7016500 | Msa0346480:intron | 30.0% | |
| TCTATTGTTTGTTCAAATGG+TGG | - | chr3_1:7016484-7016503 | Msa0346480:intron | 30.0% | |
| ACCAATATGGTGACTTTATT+TGG | - | chr3_1:7016585-7016604 | Msa0346480:intron | 30.0% | |
| ! | CCAATATGGTGACTTTATTT+GGG | - | chr3_1:7016586-7016605 | Msa0346480:intron | 30.0% |
| ! | CAATATGGTGACTTTATTTG+GGG | - | chr3_1:7016587-7016606 | Msa0346480:intron | 30.0% |
| ! | AATATGGTGACTTTATTTGG+GGG | - | chr3_1:7016588-7016607 | Msa0346480:intron | 30.0% |
| TAACTATCATGAAAAAGCCA+TGG | - | chr3_1:7016803-7016822 | Msa0346480:intron | 30.0% | |
| ! | CAATTTTACAATTTCGTGCA+AGG | - | chr3_1:7017116-7017135 | Msa0346480:intron | 30.0% |
| TTAACCACAATCACGTAATA+GGG | + | chr3_1:7017222-7017241 | None:intergenic | 30.0% | |
| ATTAACCACAATCACGTAAT+AGG | + | chr3_1:7017223-7017242 | None:intergenic | 30.0% | |
| TGAAAAAACGAATATGCTTC+TGG | + | chr3_1:7017289-7017308 | None:intergenic | 30.0% | |
| TTAGGAATTGGAACTATTCA+TGG | + | chr3_1:7017375-7017394 | None:intergenic | 30.0% | |
| ACACATGACAAAGAAAAAAG+TGG | + | chr3_1:7017449-7017468 | None:intergenic | 30.0% | |
| !!! | ACTTTTTTCTTTGTCATGTG+TGG | - | chr3_1:7017448-7017467 | Msa0346480:intron | 30.0% |
| AAGAGAAAGATAATCTCACA+TGG | + | chr3_1:7017490-7017509 | None:intergenic | 30.0% | |
| ACAAACATGTTGCAATATCA+GGG | + | chr3_1:7017684-7017703 | None:intergenic | 30.0% | |
| TGCCGACATAAAAAATTTAC+CGG | - | chr3_1:7017736-7017755 | Msa0346480:five_prime_UTR | 30.0% | |
| GACCAATGTTAATAAGTTAG+TGG | - | chr3_1:7017835-7017854 | Msa0346480:intron | 30.0% | |
| GACCAATGTTAATAAGTTAG+TGG | - | chr3_1:7017835-7017854 | Msa0346480:intron | 30.0% | |
| TTTCACACTCAAACTATTTG+AGG | + | chr3_1:7018164-7018183 | None:intergenic | 30.0% | |
| AATGAGTATGATTGTACTTG+AGG | - | chr3_1:7018462-7018481 | Msa0346480:intron | 30.0% | |
| !!! | TATTGTTGTTTTCCCTATAC+TGG | - | chr3_1:7018587-7018606 | Msa0346480:intron | 30.0% |
| CACTTATGTATCAAGTCAAA+TGG | + | chr3_1:7018698-7018717 | None:intergenic | 30.0% | |
| !!! | TCACATTTACCCAGTTTTTT+TGG | - | chr3_1:7018796-7018815 | Msa0346480:intron | 30.0% |
| TTACCTTCACCAAAAAAACT+GGG | + | chr3_1:7018808-7018827 | None:intergenic | 30.0% | |
| ! | ATACTGTATTCGTGCTTTTA+TGG | - | chr3_1:7018839-7018858 | Msa0346480:intron | 30.0% |
| ! | TACTGTATTCGTGCTTTTAT+GGG | - | chr3_1:7018840-7018859 | Msa0346480:intron | 30.0% |
| ! | AGAAAACTGTTTTGTGAGTT+TGG | + | chr3_1:7019677-7019696 | None:intergenic | 30.0% |
| ! | AAAACAGTTTTCTGCAACTT+TGG | - | chr3_1:7019684-7019703 | Msa0346480:intron | 30.0% |
| ! | ACAAAACTGTTTTGTGAGTT+TGG | + | chr3_1:7019802-7019821 | None:intergenic | 30.0% |
| !! | AAAACAGTTTTGTGCAACTT+TGG | - | chr3_1:7019809-7019828 | Msa0346480:intron | 30.0% |
| CACAGATTTCATGATATAAG+AGG | + | chr3_1:7019869-7019888 | None:intergenic | 30.0% | |
| TTAACTTTCGAACTTTCACA+TGG | - | chr3_1:7020277-7020296 | Msa0346480:intron | 30.0% | |
| AAGTTTATGATATGTGCTAC+TGG | - | chr3_1:7020356-7020375 | Msa0346480:intron | 30.0% | |
| ! | TCGTGTTTGTCTTTTTGTAA+TGG | - | chr3_1:7020391-7020410 | Msa0346480:intron | 30.0% |
| ! | TTTTTGTTAACATGAATGGG+TGG | - | chr3_1:7020453-7020472 | Msa0346480:intron | 30.0% |
| ! | TTTTGTTAACATGAATGGGT+GGG | - | chr3_1:7020454-7020473 | Msa0346480:intron | 30.0% |
| TTGTCACTGATACAAATAGA+TGG | - | chr3_1:7020698-7020717 | Msa0346480:intron | 30.0% | |
| TGTCACTGATACAAATAGAT+GGG | - | chr3_1:7020699-7020718 | Msa0346480:intron | 30.0% | |
| ATGTGATCCAAGAAATAATG+AGG | - | chr3_1:7020803-7020822 | Msa0346480:intron | 30.0% | |
| ACTCTTACCTATGAACAAAT+AGG | - | chr3_1:7020924-7020943 | Msa0346480:intron | 30.0% | |
| CATCAAACCTATTTGTTCAT+AGG | + | chr3_1:7020934-7020953 | None:intergenic | 30.0% | |
| ATGAACAAATAGGTTTGATG+AGG | - | chr3_1:7020934-7020953 | Msa0346480:intron | 30.0% | |
| TCCACCAATAATATCAAAGT+TGG | - | chr3_1:7020979-7020998 | Msa0346480:intron | 30.0% | |
| TCCAACTTTGATATTATTGG+TGG | + | chr3_1:7020983-7021002 | None:intergenic | 30.0% | |
| CGATCCAACTTTGATATTAT+TGG | + | chr3_1:7020986-7021005 | None:intergenic | 30.0% | |
| ATAATATCAAAGTTGGATCG+TGG | - | chr3_1:7020986-7021005 | Msa0346480:intron | 30.0% | |
| ! | TGATGTTAACTCTGGATTTT+TGG | - | chr3_1:7021069-7021088 | Msa0346480:intron | 30.0% |
| ! | ATCAAAGTCGTTGATTACTT+GGG | - | chr3_1:7021231-7021250 | Msa0346480:intron | 30.0% |
| ! | AGGCAAACTATTTTATCCAT+GGG | + | chr3_1:7021462-7021481 | None:intergenic | 30.0% |
| ! | TAGGCAAACTATTTTATCCA+TGG | + | chr3_1:7021463-7021482 | None:intergenic | 30.0% |
| ! | ACAAAACCAAATACCTTTTG+GGG | + | chr3_1:7021508-7021527 | None:intergenic | 30.0% |
| GAGAAATTTCATCTGCTATA+CGG | + | chr3_1:7021613-7021632 | None:intergenic | 30.0% | |
| TATAGATGTATAGACAGTAC+TGG | - | chr3_1:7021800-7021819 | Msa0346480:intron | 30.0% | |
| ! | ATGGCAGAATTTAGTTTATC+AGG | - | chr3_1:7022000-7022019 | Msa0346480:intron | 30.0% |
| TATCTTGCCTTGATTCAAAT+TGG | - | chr3_1:7022068-7022087 | Msa0346480:intron | 30.0% | |
| GATTACTCCAATTTGAATCA+AGG | + | chr3_1:7022078-7022097 | None:intergenic | 30.0% | |
| !! | CTTAAGCTTTAAGTAATAGC+AGG | + | chr3_1:7022168-7022187 | None:intergenic | 30.0% |
| !! | TGAAACAATTGATAGTGGTT+AGG | + | chr3_1:7022243-7022262 | None:intergenic | 30.0% |
| AAGCTTGAAACAATTGATAG+TGG | + | chr3_1:7022248-7022267 | None:intergenic | 30.0% | |
| ATTTCTATTCATGGTACAAG+AGG | - | chr3_1:7022384-7022403 | Msa0346480:five_prime_UTR | 30.0% | |
| ! | CTCGCATAACTAATTAGTTT+CGG | + | chr3_1:7022483-7022502 | None:intergenic | 30.0% |
| CATAAGGTTTGATTCTACAT+AGG | + | chr3_1:7022806-7022825 | None:intergenic | 30.0% | |
| ! | CTTTTATGGTCATATGCATA+AGG | + | chr3_1:7022822-7022841 | None:intergenic | 30.0% |
| ATAGGAGGAACACATTTATT+AGG | + | chr3_1:7022871-7022890 | None:intergenic | 30.0% | |
| ATTCCTATTCTCTTAAACAC+AGG | - | chr3_1:7023059-7023078 | Msa0346480:five_prime_UTR | 30.0% | |
| TAGATCAGCAAGGATATATT+TGG | - | chr3_1:7023145-7023164 | Msa0346480:five_prime_UTR | 30.0% | |
| ATATATTTGGCAGTGTGATA+TGG | - | chr3_1:7023158-7023177 | Msa0346480:five_prime_UTR | 30.0% | |
| GTGTGATATGGTATTCATTA+TGG | - | chr3_1:7023170-7023189 | Msa0346480:five_prime_UTR | 30.0% | |
| !! | ACTATATTTTGAAGGATTGG+AGG | - | chr3_1:7023201-7023220 | Msa0346480:five_prime_UTR | 30.0% |
| ! | AATGCCATTCCTTGTATTTT+CGG | + | chr3_1:7023292-7023311 | None:intergenic | 30.0% |
| ! | AATGCCATTCCTTGTATTTT+CGG | + | chr3_1:7023292-7023311 | None:intergenic | 30.0% |
| !! | CTATGAACATTGCTGATTTA+AGG | - | chr3_1:7023462-7023481 | Msa0346480:five_prime_UTR | 30.0% |
| !!! | CATGGATTCTGTAGTTTTTT+TGG | - | chr3_1:7023571-7023590 | Msa0346480:five_prime_UTR | 30.0% |
| !!! | ATTCTGTAGTTTTTTTGGCT+TGG | - | chr3_1:7023576-7023595 | Msa0346480:five_prime_UTR | 30.0% |
| ! | TTGCTGCCATGTTTTATATA+TGG | - | chr3_1:7023621-7023640 | Msa0346480:five_prime_UTR | 30.0% |
| GTTTGATTATCATGCAGAAT+TGG | - | chr3_1:7023659-7023678 | Msa0346480:five_prime_UTR | 30.0% | |
| TAATGTATGTTTGTGTGTCA+TGG | - | chr3_1:7023683-7023702 | Msa0346480:five_prime_UTR | 30.0% | |
| TTCATTCTGCATCAAAACCA+TGG | + | chr3_1:7015096-7015115 | None:intergenic | 35.0% | |
| ATCAAGGCCTCAAAGAAATT+GGG | + | chr3_1:7016173-7016192 | None:intergenic | 35.0% | |
| ! | CACATACCTTCTTTTCATCA+AGG | + | chr3_1:7016157-7016176 | None:intergenic | 35.0% |
| ! | AGAAGGTATGTGTCTTCATT+AGG | - | chr3_1:7015512-7015531 | Msa0346480:three_prime_UTR | 35.0% |
| !! | AACTCATTGCATGCTATTTC+TGG | + | chr3_1:7015755-7015774 | None:intergenic | 35.0% |
| CAACCATTTACTGTCAAACT+TGG | + | chr3_1:7015812-7015831 | None:intergenic | 35.0% | |
| CAAGTTTAACAGTACTTGAG+TGG | + | chr3_1:7015852-7015871 | None:intergenic | 35.0% | |
| ! | CACTCAAGTACTGTTAAACT+TGG | - | chr3_1:7015850-7015869 | Msa0346480:CDS | 35.0% |
| ! | AGAAGGTATGTGTCTTCATT+AGG | + | chr3_1:7015512-7015531 | None:intergenic | 35.0% |
| ! | CACATACCTTCTTTTCATCA+AGG | - | chr3_1:7016157-7016176 | Msa0346480:five_prime_UTR | 35.0% |
| ATCAAGGCCTCAAAGAAATT+GGG | - | chr3_1:7016173-7016192 | Msa0346480:five_prime_UTR | 35.0% | |
| TATATCTGAAGGCTTGTCAT+TGG | + | chr3_1:7016255-7016274 | None:intergenic | 35.0% | |
| AACAAACGTGAATGAATCAG+GGG | + | chr3_1:7016462-7016481 | None:intergenic | 35.0% | |
| CAACAAACGTGAATGAATCA+GGG | + | chr3_1:7016463-7016482 | None:intergenic | 35.0% | |
| AAGGTTTCGAGCTATTCAAT+CGG | - | chr3_1:7016520-7016539 | Msa0346480:intron | 35.0% | |
| !! | AATCGGATGCAAACTGATTT+TGG | - | chr3_1:7016537-7016556 | Msa0346480:intron | 35.0% |
| TTGGTGTGATGTCTAACATT+AGG | + | chr3_1:7016570-7016589 | None:intergenic | 35.0% | |
| TGTTAGACATCACACCAATA+TGG | - | chr3_1:7016572-7016591 | Msa0346480:intron | 35.0% | |
| CCCAAATAAAGTCACCATAT+TGG | + | chr3_1:7016589-7016608 | None:intergenic | 35.0% | |
| ATGGCTGAAGAGATTGATAT+TGG | - | chr3_1:7016711-7016730 | Msa0346480:intron | 35.0% | |
| GCAAACAGTAAATTGCCTAA+CGG | - | chr3_1:7016741-7016760 | Msa0346480:intron | 35.0% | |
| GATTGCGCAATATATATTGC+AGG | - | chr3_1:7016778-7016797 | Msa0346480:intron | 35.0% | |
| CAGAATCTTCGAAATTTCCA+TGG | + | chr3_1:7016823-7016842 | None:intergenic | 35.0% | |
| CATGGAAATTTCGAAGATTC+TGG | - | chr3_1:7016821-7016840 | Msa0346480:intron | 35.0% | |
| ! | TTCAACGGTCTCAAATCTTT+TGG | + | chr3_1:7017047-7017066 | None:intergenic | 35.0% |
| ! | AGATTTGAGACCGTTGAAAA+AGG | - | chr3_1:7017049-7017068 | Msa0346480:intron | 35.0% |
| !!! | TAATGCTCCACCTTTTTCAA+CGG | + | chr3_1:7017062-7017081 | None:intergenic | 35.0% |
| TCATTGACAAAAATAGTGGC+TGG | + | chr3_1:7017199-7017218 | None:intergenic | 35.0% | |
| AGGGTCATTGACAAAAATAG+TGG | + | chr3_1:7017203-7017222 | None:intergenic | 35.0% | |
| ! | CGAATATGCTTCTGGAAAAT+TGG | + | chr3_1:7017281-7017300 | None:intergenic | 35.0% |
| ! | AATTCAACGCTTTAAGTCGT+AGG | + | chr3_1:7017532-7017551 | None:intergenic | 35.0% |
| !! | AAAGCGTTGAATTGCTGAAT+AGG | - | chr3_1:7017539-7017558 | Msa0346480:five_prime_UTR | 35.0% |
| !! | AAGCGTTGAATTGCTGAATA+GGG | - | chr3_1:7017540-7017559 | Msa0346480:five_prime_UTR | 35.0% |
| ATGACTGTACTTGGACAAAA+TGG | + | chr3_1:7017597-7017616 | None:intergenic | 35.0% | |
| CACAAACATGTTGCAATATC+AGG | + | chr3_1:7017685-7017704 | None:intergenic | 35.0% | |
| !! | TAGTGGATATGTTAGCTTGT+AGG | - | chr3_1:7017852-7017871 | Msa0346480:intron | 35.0% |
| TAGCTCAGATGGTGAATTAA+GGG | + | chr3_1:7017915-7017934 | None:intergenic | 35.0% | |
| !! | TAGTGGATATGTTAGCTTGT+AGG | - | chr3_1:7017852-7017871 | Msa0346480:intron | 35.0% |
| !! | AGGAGTTTTTAGGAGGTATA+GGG | + | chr3_1:7018033-7018052 | None:intergenic | 35.0% |
| TAGCTCAGATGGTGAATTAA+GGG | + | chr3_1:7017915-7017934 | None:intergenic | 35.0% | |
| AGCTACCTACACAGTAATTA+GGG | - | chr3_1:7018078-7018097 | Msa0346480:five_prime_UTR | 35.0% | |
| TTTACAATCTGACCATCTGT+TGG | - | chr3_1:7018107-7018126 | Msa0346480:five_prime_UTR | 35.0% | |
| TAGCTAACTATACCAACAGA+TGG | + | chr3_1:7018122-7018141 | None:intergenic | 35.0% | |
| ! | GACTCCCATATATTCGATTT+TGG | - | chr3_1:7018250-7018269 | Msa0346480:five_prime_UTR | 35.0% |
| GACGCCAAAATCGAATATAT+GGG | + | chr3_1:7018257-7018276 | None:intergenic | 35.0% | |
| AGACGCCAAAATCGAATATA+TGG | + | chr3_1:7018258-7018277 | None:intergenic | 35.0% | |
| CAGTAACATATGGCCAATTA+TGG | + | chr3_1:7018357-7018376 | None:intergenic | 35.0% | |
| !! | TTTTGGTGTGCTAAATCACT+TGG | - | chr3_1:7018395-7018414 | Msa0346480:intron | 35.0% |
| ! | TTTGGTGTGCTAAATCACTT+GGG | - | chr3_1:7018396-7018415 | Msa0346480:intron | 35.0% |
| ! | GAGTCTCTAAAAAACATGTC+TGG | - | chr3_1:7018526-7018545 | Msa0346480:intron | 35.0% |
| ! | CCTGTTCGTGAATTTTGTAT+TGG | + | chr3_1:7018645-7018664 | None:intergenic | 35.0% |
| CCAATACAAAATTCACGAAC+AGG | - | chr3_1:7018642-7018661 | Msa0346480:intron | 35.0% | |
| !!! | TTACCCAGTTTTTTTGGTGA+AGG | - | chr3_1:7018802-7018821 | Msa0346480:intron | 35.0% |
| CTTACCTTCACCAAAAAAAC+TGG | + | chr3_1:7018809-7018828 | None:intergenic | 35.0% | |
| AAAGTCTACAAAATCCACCA+TGG | - | chr3_1:7018867-7018886 | Msa0346480:intron | 35.0% | |
| TTAACCAGCAATTCTTATGG+AGG | - | chr3_1:7018962-7018981 | Msa0346480:intron | 35.0% | |
| TAACCAGCAATTCTTATGGA+GGG | - | chr3_1:7018963-7018982 | Msa0346480:intron | 35.0% | |
| AATTGTGCACACGTTTCTTA+TGG | - | chr3_1:7019215-7019234 | Msa0346480:intron | 35.0% | |
| ATAGCAAACATTATGCCAAG+TGG | + | chr3_1:7019273-7019292 | None:intergenic | 35.0% | |
| GAACTTTACTATGTGTGTCA+AGG | - | chr3_1:7019446-7019465 | Msa0346480:intron | 35.0% | |
| !! | TTTCTGCAACTTTGGTGTTT+AGG | - | chr3_1:7019692-7019711 | Msa0346480:intron | 35.0% |
| !! | TTTGTGCAACTTTGGTGTTT+AGG | - | chr3_1:7019817-7019836 | Msa0346480:intron | 35.0% |
| !! | CCACTTAGTGTTTCTGATTT+TGG | + | chr3_1:7019895-7019914 | None:intergenic | 35.0% |
| CCAAAATCAGAAACACTAAG+TGG | - | chr3_1:7019892-7019911 | Msa0346480:intron | 35.0% | |
| AATAGAAGTTGTTGAGCACA+TGG | + | chr3_1:7019981-7020000 | None:intergenic | 35.0% | |
| AATCCAAAATGAGAAACACG+AGG | - | chr3_1:7020125-7020144 | Msa0346480:intron | 35.0% | |
| ! | ATACCTCGTGTTTCTCATTT+TGG | + | chr3_1:7020131-7020150 | None:intergenic | 35.0% |
| AAACTAACGGCAACAATAGA+CGG | + | chr3_1:7020168-7020187 | None:intergenic | 35.0% | |
| TCCAAGAAATAATGAGGTAG+AGG | - | chr3_1:7020809-7020828 | Msa0346480:intron | 35.0% | |
| ! | ACCTCTACCTCATTATTTCT+TGG | + | chr3_1:7020813-7020832 | None:intergenic | 35.0% |
| GAAATAATGAGGTAGAGGTT+CGG | - | chr3_1:7020814-7020833 | Msa0346480:intron | 35.0% | |
| AAATAATGAGGTAGAGGTTC+GGG | - | chr3_1:7020815-7020834 | Msa0346480:intron | 35.0% | |
| AAGTATTCTTCAAGAATGGG+TGG | - | chr3_1:7020856-7020875 | Msa0346480:intron | 35.0% | |
| ! | ACAACATTGATATTGGTGCT+TGG | - | chr3_1:7020898-7020917 | Msa0346480:intron | 35.0% |
| ! | CAACATTGATATTGGTGCTT+GGG | - | chr3_1:7020899-7020918 | Msa0346480:intron | 35.0% |
| TTGATCTCAGTTTCCTTAGT+TGG | + | chr3_1:7021216-7021235 | None:intergenic | 35.0% | |
| ! | GATCAAAGTCGTTGATTACT+TGG | - | chr3_1:7021230-7021249 | Msa0346480:intron | 35.0% |
| ! | TTGATTACTTGGGATTTGCT+TGG | - | chr3_1:7021241-7021260 | Msa0346480:intron | 35.0% |
| ! | AAAACCAAATACCTTTTGGG+GGG | + | chr3_1:7021506-7021525 | None:intergenic | 35.0% |
| ! | CAAAACCAAATACCTTTTGG+GGG | + | chr3_1:7021507-7021526 | None:intergenic | 35.0% |
| ACAACACACAAAAGAATGAC+AGG | + | chr3_1:7021533-7021552 | None:intergenic | 35.0% | |
| AAAGTTGAATACCTACTACG+TGG | - | chr3_1:7021646-7021665 | Msa0346480:intron | 35.0% | |
| CGTGTAGCTTATTCTAAGTA+TGG | - | chr3_1:7021981-7022000 | Msa0346480:intron | 35.0% | |
| ACTGATATCTAATGAGCAGA+AGG | - | chr3_1:7022026-7022045 | Msa0346480:intron | 35.0% | |
| ATAAAAACTAATGTGCGGAG+TGG | - | chr3_1:7022129-7022148 | Msa0346480:five_prime_UTR | 35.0% | |
| !! | CAATTGATAGTGGTTAGGAT+AGG | + | chr3_1:7022238-7022257 | None:intergenic | 35.0% |
| TTAGTTAATCGTCAAGCAAC+AGG | + | chr3_1:7022278-7022297 | None:intergenic | 35.0% | |
| !!! | TCATCAGAACTGCCTTATTT+TGG | - | chr3_1:7022298-7022317 | Msa0346480:five_prime_UTR | 35.0% |
| GCAGCCTTAATTTCTATTCA+TGG | - | chr3_1:7022375-7022394 | Msa0346480:five_prime_UTR | 35.0% | |
| AGCATATGTCATTCTTCTGT+TGG | + | chr3_1:7022429-7022448 | None:intergenic | 35.0% | |
| CGAAACTAATTAGTTATGCG+AGG | - | chr3_1:7022481-7022500 | Msa0346480:five_prime_UTR | 35.0% | |
| TATTCCTTAGCAAAACACGA+CGG | + | chr3_1:7022639-7022658 | None:intergenic | 35.0% | |
| ! | TCGTGTTTTGCTAAGGAATA+TGG | - | chr3_1:7022639-7022658 | Msa0346480:five_prime_UTR | 35.0% |
| !!! | ACACCTTGTCATTTTTCTTG+TGG | + | chr3_1:7022728-7022747 | None:intergenic | 35.0% |
| AAAATGACAAGGTGTACTTC+AGG | - | chr3_1:7022733-7022752 | Msa0346480:five_prime_UTR | 35.0% | |
| AAATGACAAGGTGTACTTCA+GGG | - | chr3_1:7022734-7022753 | Msa0346480:five_prime_UTR | 35.0% | |
| ATGGTTGGATAGGGTTTAAT+TGG | - | chr3_1:7022757-7022776 | Msa0346480:five_prime_UTR | 35.0% | |
| ATGACCATAAAAGACAGATC+AGG | - | chr3_1:7022829-7022848 | Msa0346480:five_prime_UTR | 35.0% | |
| GTGATCATCTTTGATATAGG+AGG | + | chr3_1:7022886-7022905 | None:intergenic | 35.0% | |
| GGAGTGATCATCTTTGATAT+AGG | + | chr3_1:7022889-7022908 | None:intergenic | 35.0% | |
| AAGATGATCACTCCAAATGA+TGG | - | chr3_1:7022895-7022914 | Msa0346480:five_prime_UTR | 35.0% | |
| GATAGCTGAATCACATTTGT+GGG | + | chr3_1:7023120-7023139 | None:intergenic | 35.0% | |
| AGATAGCTGAATCACATTTG+TGG | + | chr3_1:7023121-7023140 | None:intergenic | 35.0% | |
| CTATCTATCATAGATCAGCA+AGG | - | chr3_1:7023135-7023154 | Msa0346480:five_prime_UTR | 35.0% | |
| GGAATGGCATTCTTCATATA+AGG | - | chr3_1:7023301-7023320 | Msa0346480:five_prime_UTR | 35.0% | |
| GGAATGGCATTCTTCATATA+AGG | - | chr3_1:7023301-7023320 | Msa0346480:five_prime_UTR | 35.0% | |
| ATAATGTGTGCTAGAAGACA+TGG | - | chr3_1:7023553-7023572 | Msa0346480:five_prime_UTR | 35.0% | |
| TTGTTCGCTTGTTCAAATGC+TGG | + | chr3_1:7015173-7015192 | None:intergenic | 40.0% | |
| !! | AATGTGATGGACGATCTCTT+TGG | + | chr3_1:7015380-7015399 | None:intergenic | 40.0% |
| CATCAAGGCCTCAAAGAAAT+TGG | + | chr3_1:7016172-7016191 | None:intergenic | 40.0% | |
| TTGAGGCCTTGATGAAAAGA+AGG | - | chr3_1:7015495-7015514 | Msa0346480:three_prime_UTR | 40.0% | |
| ! | TAGACAGTTCTAGCACTACA+AGG | - | chr3_1:7015629-7015648 | Msa0346480:intron | 40.0% |
| !! | CTATTTCTGGAAGATCACAG+TGG | + | chr3_1:7015920-7015939 | None:intergenic | 40.0% |
| GAGTTCAATGAGTCAAAGAC+AGG | - | chr3_1:7015770-7015789 | Msa0346480:CDS | 40.0% | |
| TCAATGAGTCAAAGACAGGT+TGG | - | chr3_1:7015774-7015793 | Msa0346480:CDS | 40.0% | |
| TGCCCAAGTTTGACAGTAAA+TGG | - | chr3_1:7015806-7015825 | Msa0346480:CDS | 40.0% | |
| GACAGTAAATGGTTGAACCT+TGG | - | chr3_1:7015817-7015836 | Msa0346480:CDS | 40.0% | |
| !! | TTGAGTGGATTGAATCACCA+AGG | + | chr3_1:7015837-7015856 | None:intergenic | 40.0% |
| TCAAAGAGTCAAAGACAGGT+TGG | + | chr3_1:7015888-7015907 | None:intergenic | 40.0% | |
| !! | AGCTCATTGCATGCTATTTC+TGG | - | chr3_1:7015907-7015926 | Msa0346480:intron | 40.0% |
| !! | CTATTTCTGGAAGATCACAG+TGG | - | chr3_1:7015920-7015939 | Msa0346480:intron | 40.0% |
| ! | TAGACAGTTCTAGCACTAGA+AGG | + | chr3_1:7016032-7016051 | None:intergenic | 40.0% |
| TTGAGGCCTTGATGAAAAGA+AGG | + | chr3_1:7015495-7015514 | None:intergenic | 40.0% | |
| CATCAAGGCCTCAAAGAAAT+TGG | - | chr3_1:7016172-7016191 | Msa0346480:five_prime_UTR | 40.0% | |
| ! | GATGATCGATCTCTTTGGAA+AGG | - | chr3_1:7016286-7016305 | Msa0346480:five_prime_UTR | 40.0% |
| GCAACAAACGTGAATGAATC+AGG | + | chr3_1:7016464-7016483 | None:intergenic | 40.0% | |
| ! | TGGTGGATATGCTTCTTTGA+AGG | - | chr3_1:7016501-7016520 | Msa0346480:intron | 40.0% |
| AGTAAATTGCCTAACGGTGA+GGG | - | chr3_1:7016747-7016766 | Msa0346480:intron | 40.0% | |
| ! | GCTCTATAGTTTGTGAAGTC+TGG | + | chr3_1:7016852-7016871 | None:intergenic | 40.0% |
| GACTTCACAAACTATAGAGC+TGG | - | chr3_1:7016852-7016871 | Msa0346480:intron | 40.0% | |
| CTATAGAGCTGGAATTAGTG+TGG | - | chr3_1:7016863-7016882 | Msa0346480:intron | 40.0% | |
| ! | TTTGAGACCGTTGAAAAAGG+TGG | - | chr3_1:7017052-7017071 | Msa0346480:intron | 40.0% |
| ATGACCCTATTACGTGATTG+TGG | - | chr3_1:7017215-7017234 | Msa0346480:intron | 40.0% | |
| GGTGTACTTGAGATGTAGAA+TGG | + | chr3_1:7017260-7017279 | None:intergenic | 40.0% | |
| TACTTGGACAAAATGGAAGG+TGG | + | chr3_1:7017590-7017609 | None:intergenic | 40.0% | |
| CTGTACTTGGACAAAATGGA+AGG | + | chr3_1:7017593-7017612 | None:intergenic | 40.0% | |
| ! | AAGGGTTTGATGACTGTACT+TGG | + | chr3_1:7017606-7017625 | None:intergenic | 40.0% |
| CAAACCCTTCTGTTCCTTAT+TGG | - | chr3_1:7017617-7017636 | Msa0346480:five_prime_UTR | 40.0% | |
| !! | AGGAGTTTTCAGGAGGTATA+GGG | + | chr3_1:7017885-7017904 | None:intergenic | 40.0% |
| GTAGCTCAGATGGTGAATTA+AGG | + | chr3_1:7017916-7017935 | None:intergenic | 40.0% | |
| !! | GAGGAGTTTTTAGGAGGTAT+AGG | + | chr3_1:7018034-7018053 | None:intergenic | 40.0% |
| ATACCTCCTAAAAACTCCTC+TGG | - | chr3_1:7018034-7018053 | Msa0346480:five_prime_UTR | 40.0% | |
| GTAGCTCAGATGGTGAATTA+AGG | + | chr3_1:7017916-7017935 | None:intergenic | 40.0% | |
| GAGCTACCTACACAGTAATT+AGG | - | chr3_1:7018077-7018096 | Msa0346480:five_prime_UTR | 40.0% | |
| GCTACCTACACAGTAATTAG+GGG | - | chr3_1:7018079-7018098 | Msa0346480:five_prime_UTR | 40.0% | |
| CTAACCCCTAATTACTGTGT+AGG | + | chr3_1:7018086-7018105 | None:intergenic | 40.0% | |
| !! | ATTCGATTTTGGCGTCTAGT+TGG | - | chr3_1:7018261-7018280 | Msa0346480:five_prime_UTR | 40.0% |
| !! | TTCGATTTTGGCGTCTAGTT+GGG | - | chr3_1:7018262-7018281 | Msa0346480:five_prime_UTR | 40.0% |
| AAAATAGTTCAGTGTGCTGC+TGG | - | chr3_1:7018330-7018349 | Msa0346480:intron | 40.0% | |
| CAAAACATTCATCCATGCAG+AGG | + | chr3_1:7018380-7018399 | None:intergenic | 40.0% | |
| ! | CTCTGCATGGATGAATGTTT+TGG | - | chr3_1:7018378-7018397 | Msa0346480:intron | 40.0% |
| TTGGTGTGCTAAATCACTTG+GGG | - | chr3_1:7018397-7018416 | Msa0346480:intron | 40.0% | |
| TTGTGCAAGTCTTGCATAGA+AGG | - | chr3_1:7018439-7018458 | Msa0346480:intron | 40.0% | |
| ! | AATTGGGAAGAGCTTGCTTA+GGG | + | chr3_1:7018943-7018962 | None:intergenic | 40.0% |
| ! | AAATTGGGAAGAGCTTGCTT+AGG | + | chr3_1:7018944-7018963 | None:intergenic | 40.0% |
| TTTCCCTCCATAAGAATTGC+TGG | + | chr3_1:7018969-7018988 | None:intergenic | 40.0% | |
| ATTCTTATGGAGGGAAAACC+CGG | - | chr3_1:7018972-7018991 | Msa0346480:intron | 40.0% | |
| TTGCTTGAAGGAAATCTGCA+TGG | - | chr3_1:7019065-7019084 | Msa0346480:intron | 40.0% | |
| AATTGTGCACACGTTTCCTA+TGG | - | chr3_1:7019090-7019109 | Msa0346480:intron | 40.0% | |
| ATACCATACATTGTGCCAAG+TGG | + | chr3_1:7019148-7019167 | None:intergenic | 40.0% | |
| AATGATGCTTGCTTGCTTGA+AGG | - | chr3_1:7019178-7019197 | Msa0346480:intron | 40.0% | |
| TTGCTTGAAGGAAATCTGCA+TGG | - | chr3_1:7019065-7019084 | Msa0346480:intron | 40.0% | |
| TGCACACGTTTCTTATGGTT+GGG | - | chr3_1:7019220-7019239 | Msa0346480:intron | 40.0% | |
| TCTTATGGTTGGGGTAATGA+TGG | - | chr3_1:7019230-7019249 | Msa0346480:intron | 40.0% | |
| CAAACATTATGCCAAGTGGA+TGG | + | chr3_1:7019269-7019288 | None:intergenic | 40.0% | |
| ! | GAAATGTGGTTGATGTCTTG+TGG | + | chr3_1:7019391-7019410 | None:intergenic | 40.0% |
| CTGGTAGAAAACACGAAATG+TGG | + | chr3_1:7019405-7019424 | None:intergenic | 40.0% | |
| ! | AAAGTGTTCATTCTTGGCTC+TGG | + | chr3_1:7019424-7019443 | None:intergenic | 40.0% |
| AGAGCCAAGAATGAACACTT+TGG | - | chr3_1:7019423-7019442 | Msa0346480:intron | 40.0% | |
| GAGCCAAGAATGAACACTTT+GGG | - | chr3_1:7019424-7019443 | Msa0346480:intron | 40.0% | |
| ! | GTTCCCAAAGTGTTCATTCT+TGG | + | chr3_1:7019430-7019449 | None:intergenic | 40.0% |
| GGTGCGATATGTTTGATGAA+AGG | - | chr3_1:7019483-7019502 | Msa0346480:five_prime_UTR | 40.0% | |
| CATAACACAGTTGCAGAAAG+AGG | + | chr3_1:7019602-7019621 | None:intergenic | 40.0% | |
| TCAACAGTTCAAGGCAATAC+TGG | - | chr3_1:7020219-7020238 | Msa0346480:intron | 40.0% | |
| CAAATAGGGGCTGTTAGTAA+TGG | + | chr3_1:7020642-7020661 | None:intergenic | 40.0% | |
| TCAGTGACAAAGTAAGTAGC+AGG | + | chr3_1:7020688-7020707 | None:intergenic | 40.0% | |
| !!! | TTTGGTTTTGGAAAGGAGTG+TGG | - | chr3_1:7020753-7020772 | Msa0346480:intron | 40.0% |
| TTCTTCAAGAATGGGTGGTT+TGG | - | chr3_1:7020861-7020880 | Msa0346480:intron | 40.0% | |
| ACTGCATCTGATGTTAACTC+TGG | - | chr3_1:7021061-7021080 | Msa0346480:intron | 40.0% | |
| GTTTGTTTATTTGCCACTGC+AGG | - | chr3_1:7021154-7021173 | Msa0346480:intron | 40.0% | |
| CAAAATCCTAACCAAGGCAA+AGG | + | chr3_1:7021180-7021199 | None:intergenic | 40.0% | |
| CTCTGACAAAATCCTAACCA+AGG | + | chr3_1:7021186-7021205 | None:intergenic | 40.0% | |
| !! | TTGCTTGGAAGTGCTCATTT+CGG | - | chr3_1:7021256-7021275 | Msa0346480:intron | 40.0% |
| TGTCGAGGCAGAAAATGAAT+TGG | - | chr3_1:7021281-7021300 | Msa0346480:intron | 40.0% | |
| ! | GAATTGGTGTTCAAAATCGG+AGG | - | chr3_1:7021297-7021316 | Msa0346480:intron | 40.0% |
| AGAACAAAGTTGTCTACCTG+AGG | - | chr3_1:7021397-7021416 | Msa0346480:intron | 40.0% | |
| ATTCGTATTGTCATCGTCTC+AGG | - | chr3_1:7021578-7021597 | Msa0346480:intron | 40.0% | |
| TATTGTCATCGTCTCAGGAA+CGG | - | chr3_1:7021583-7021602 | Msa0346480:intron | 40.0% | |
| TTTCTTCACAAGTGTCAACC+AGG | - | chr3_1:7021765-7021784 | Msa0346480:intron | 40.0% | |
| TTCTTCACAAGTGTCAACCA+GGG | - | chr3_1:7021766-7021785 | Msa0346480:intron | 40.0% | |
| CAAGATACACAAAGTCGACT+CGG | - | chr3_1:7021904-7021923 | Msa0346480:five_prime_UTR | 40.0% | |
| TCATGGTACAAGAGGCAATT+AGG | - | chr3_1:7022392-7022411 | Msa0346480:five_prime_UTR | 40.0% | |
| TCCTAACAAGAACATGTTCG+AGG | - | chr3_1:7022695-7022714 | Msa0346480:five_prime_UTR | 40.0% | |
| ACCTCGAACATGTTCTTGTT+AGG | + | chr3_1:7022699-7022718 | None:intergenic | 40.0% | |
| CAAGAACATGTTCGAGGTTA+AGG | - | chr3_1:7022701-7022720 | Msa0346480:five_prime_UTR | 40.0% | |
| GGTCCACAAGAAAAATGACA+AGG | - | chr3_1:7022722-7022741 | Msa0346480:five_prime_UTR | 40.0% | |
| !! | TTTAATTGGCCTTGGTGCAT+GGG | - | chr3_1:7022771-7022790 | Msa0346480:five_prime_UTR | 40.0% |
| ! | CACTCCTGATCTGTCTTTTA+TGG | + | chr3_1:7022836-7022855 | None:intergenic | 40.0% |
| CATAAAAGACAGATCAGGAG+TGG | - | chr3_1:7022834-7022853 | Msa0346480:five_prime_UTR | 40.0% | |
| CGACCTGTGTTTAAGAGAAT+AGG | + | chr3_1:7023065-7023084 | None:intergenic | 40.0% | |
| TTGCTGTCACCGAAAATACA+AGG | - | chr3_1:7023280-7023299 | Msa0346480:five_prime_UTR | 40.0% | |
| GTCACCGAAAATACAAGGAA+TGG | - | chr3_1:7023285-7023304 | Msa0346480:five_prime_UTR | 40.0% | |
| CCTTTATGAATGCACTGCAA+AGG | + | chr3_1:7023333-7023352 | None:intergenic | 40.0% | |
| CCTTTGCAGTGCATTCATAA+AGG | - | chr3_1:7023330-7023349 | Msa0346480:five_prime_UTR | 40.0% | |
| TTGCTGTCACCGAAAATACA+AGG | - | chr3_1:7023280-7023299 | Msa0346480:five_prime_UTR | 40.0% | |
| GTCACCGAAAATACAAGGAA+TGG | - | chr3_1:7023285-7023304 | Msa0346480:five_prime_UTR | 40.0% | |
| CCTTTATGAATGCACTGCAA+AGG | + | chr3_1:7023333-7023352 | None:intergenic | 40.0% | |
| CCTTTGCAGTGCATTCATAA+AGG | - | chr3_1:7023330-7023349 | Msa0346480:five_prime_UTR | 40.0% | |
| ! | TGATTTAAGGCATGTGTACC+AGG | - | chr3_1:7023475-7023494 | Msa0346480:five_prime_UTR | 40.0% |
| !!! | CTGTAGTTTTTTTGGCTTGG+TGG | - | chr3_1:7023579-7023598 | Msa0346480:five_prime_UTR | 40.0% |
| CACAGAACAAGATTCAGCCA+TGG | - | chr3_1:7015076-7015095 | Msa0346480:three_prime_UTR | 45.0% | |
| AATGCTGGACGCTTCTTCAA+AGG | + | chr3_1:7015158-7015177 | None:intergenic | 45.0% | |
| TGCACACAACGGTATGTTTG+AGG | + | chr3_1:7016394-7016413 | None:intergenic | 45.0% | |
| !! | CTGACTGCTTTTGCACACAA+CGG | + | chr3_1:7016383-7016402 | None:intergenic | 45.0% |
| ! | GATGGACGATCTCTTTGGAA+AGG | + | chr3_1:7015375-7015394 | None:intergenic | 45.0% |
| TAGATCTGAAGGCTTGTCGT+TGG | - | chr3_1:7015406-7015425 | Msa0346480:three_prime_UTR | 45.0% | |
| GTGCTAGAACTGTCTATGTG+TGG | + | chr3_1:7016036-7016055 | None:intergenic | 45.0% | |
| GAGCTCAAAGAGTCAAAGAC+AGG | + | chr3_1:7015892-7015911 | None:intergenic | 45.0% | |
| GTGCTAGAACTGTCTATGTG+TGG | - | chr3_1:7016036-7016055 | Msa0346480:CDS | 45.0% | |
| TCATGCACTGTTACAGTCAC+TGG | + | chr3_1:7016312-7016331 | None:intergenic | 45.0% | |
| !! | CTGACTGCTTTTGCACACAA+CGG | - | chr3_1:7016383-7016402 | Msa0346480:intron | 45.0% |
| ! | GTTGCTTTCGTGTGTTGACA+TGG | - | chr3_1:7016692-7016711 | Msa0346480:intron | 45.0% |
| CAGTAAATTGCCTAACGGTG+AGG | - | chr3_1:7016746-7016765 | Msa0346480:intron | 45.0% | |
| ! | GCTTTAAGTCGTAGGAGCAA+TGG | + | chr3_1:7017524-7017543 | None:intergenic | 45.0% |
| TGCTGAATAGGGTGTGTGAT+TGG | - | chr3_1:7017551-7017570 | Msa0346480:five_prime_UTR | 45.0% | |
| GAGGCCAATAAGGAACAGAA+GGG | + | chr3_1:7017624-7017643 | None:intergenic | 45.0% | |
| GAAAAGGGAGGTTAGAAGAG+GGG | + | chr3_1:7017655-7017674 | None:intergenic | 45.0% | |
| CGAAAAGGGAGGTTAGAAGA+GGG | + | chr3_1:7017656-7017675 | None:intergenic | 45.0% | |
| ! | CCTCTTCTAACCTCCCTTTT+CGG | - | chr3_1:7017654-7017673 | Msa0346480:five_prime_UTR | 45.0% |
| ! | CTCTTCTAACCTCCCTTTTC+GGG | - | chr3_1:7017655-7017674 | Msa0346480:five_prime_UTR | 45.0% |
| ATATCAGGGACTCCCGAAAA+GGG | + | chr3_1:7017670-7017689 | None:intergenic | 45.0% | |
| AATATCAGGGACTCCCGAAA+AGG | + | chr3_1:7017671-7017690 | None:intergenic | 45.0% | |
| TTATGTCGGCACTCACATGA+GGG | + | chr3_1:7017727-7017746 | None:intergenic | 45.0% | |
| TTTATGTCGGCACTCACATG+AGG | + | chr3_1:7017728-7017747 | None:intergenic | 45.0% | |
| TAGCATAAGTCGCTGAGACT+TGG | - | chr3_1:7017759-7017778 | Msa0346480:five_prime_UTR | 45.0% | |
| !! | GAGGAGTTTTCAGGAGGTAT+AGG | + | chr3_1:7017886-7017905 | None:intergenic | 45.0% |
| ATACCTCCTGAAAACTCCTC+TGG | - | chr3_1:7017886-7017905 | Msa0346480:five_prime_UTR | 45.0% | |
| !! | ACACCAGAGGAGTTTTTAGG+AGG | + | chr3_1:7018040-7018059 | None:intergenic | 45.0% |
| TACTGTGTAGGTAGCTCAGA+TGG | + | chr3_1:7018074-7018093 | None:intergenic | 45.0% | |
| CACATCAGAGATGACACAAG+AGG | + | chr3_1:7018206-7018225 | None:intergenic | 45.0% | |
| CATGCAGAGGCAGTAACATA+TGG | + | chr3_1:7018367-7018386 | None:intergenic | 45.0% | |
| CATATGTTACTGCCTCTGCA+TGG | - | chr3_1:7018365-7018384 | Msa0346480:intron | 45.0% | |
| ! | GAAGAATTTGCTTGCAGCAC+TGG | + | chr3_1:7018915-7018934 | None:intergenic | 45.0% |
| TTCTTATGGAGGGAAAACCC+GGG | - | chr3_1:7018973-7018992 | Msa0346480:intron | 45.0% | |
| GCCATAGCACATGATCTGAA+GGG | + | chr3_1:7019025-7019044 | None:intergenic | 45.0% | |
| AGATCATGTGCTATGGCCTT+GGG | - | chr3_1:7019028-7019047 | Msa0346480:intron | 45.0% | |
| ! | TCAGGTTGCTTCTTGCTTGA+AGG | - | chr3_1:7019053-7019072 | Msa0346480:intron | 45.0% |
| TGCACACGTTTCCTATGGTT+GGG | - | chr3_1:7019095-7019114 | Msa0346480:intron | 45.0% | |
| TCCTATGGTTGGGGTAATGA+TGG | - | chr3_1:7019105-7019124 | Msa0346480:intron | 45.0% | |
| ACCATCATTACCCCAACCAT+AGG | + | chr3_1:7019109-7019128 | None:intergenic | 45.0% | |
| GCTGCAAATAACCATCCACT+TGG | - | chr3_1:7019130-7019149 | Msa0346480:intron | 45.0% | |
| CATACATTGTGCCAAGTGGA+TGG | + | chr3_1:7019144-7019163 | None:intergenic | 45.0% | |
| CATCCACTTGGCACAATGTA+TGG | - | chr3_1:7019142-7019161 | Msa0346480:intron | 45.0% | |
| GTGCACACGTTTCTTATGGT+TGG | - | chr3_1:7019219-7019238 | Msa0346480:intron | 45.0% | |
| GCACACGTTTCTTATGGTTG+GGG | - | chr3_1:7019221-7019240 | Msa0346480:intron | 45.0% | |
| GTTGCAAGTAACCATCCACT+TGG | - | chr3_1:7019255-7019274 | Msa0346480:intron | 45.0% | |
| CCTTGAACTGTTGACATGAG+AGG | + | chr3_1:7020213-7020232 | None:intergenic | 45.0% | |
| CCTCTCATGTCAACAGTTCA+AGG | - | chr3_1:7020210-7020229 | Msa0346480:intron | 45.0% | |
| ACAGTTCAAGGCAATACTGG+TGG | - | chr3_1:7020222-7020241 | Msa0346480:intron | 45.0% | |
| CAGTTCAAGGCAATACTGGT+GGG | - | chr3_1:7020223-7020242 | Msa0346480:intron | 45.0% | |
| AGTTCAAGGCAATACTGGTG+GGG | - | chr3_1:7020224-7020243 | Msa0346480:intron | 45.0% | |
| TTATTGGTGGAGTGCGATCA+GGG | + | chr3_1:7020970-7020989 | None:intergenic | 45.0% | |
| ATTATTGGTGGAGTGCGATC+AGG | + | chr3_1:7020971-7020990 | None:intergenic | 45.0% | |
| TCAGAGTGCATTGCCAACTA+AGG | - | chr3_1:7021200-7021219 | Msa0346480:intron | 45.0% | |
| ! | TTGGTGTTCAAAATCGGAGG+TGG | - | chr3_1:7021300-7021319 | Msa0346480:intron | 45.0% |
| TGGTGTTCAAAATCGGAGGT+GGG | - | chr3_1:7021301-7021320 | Msa0346480:intron | 45.0% | |
| !! | TTACAGCTAGCTTTAGGGGA+TGG | + | chr3_1:7021365-7021384 | None:intergenic | 45.0% |
| !! | TGCGTTACAGCTAGCTTTAG+GGG | + | chr3_1:7021369-7021388 | None:intergenic | 45.0% |
| !! | GTGCGTTACAGCTAGCTTTA+GGG | + | chr3_1:7021370-7021389 | None:intergenic | 45.0% |
| ATTATGTCCTGGTGCTTGCA+GGG | + | chr3_1:7021435-7021454 | None:intergenic | 45.0% | |
| TCTTCACAAGTGTCAACCAG+GGG | - | chr3_1:7021767-7021786 | Msa0346480:intron | 45.0% | |
| TCTATAAGTAACAGTCCCCC+TGG | + | chr3_1:7021786-7021805 | None:intergenic | 45.0% | |
| ! | ACAGTACTGGACACACTAGA+TGG | - | chr3_1:7021813-7021832 | Msa0346480:intron | 45.0% |
| ! | ATTGCCGTCGTGTTTTGCTA+AGG | - | chr3_1:7022632-7022651 | Msa0346480:five_prime_UTR | 45.0% |
| TACTTCAGGGATGGTTGGAT+AGG | - | chr3_1:7022747-7022766 | Msa0346480:five_prime_UTR | 45.0% | |
| ACTTCAGGGATGGTTGGATA+GGG | - | chr3_1:7022748-7022767 | Msa0346480:five_prime_UTR | 45.0% | |
| ! | GGATAGGGTTTAATTGGCCT+TGG | - | chr3_1:7022763-7022782 | Msa0346480:five_prime_UTR | 45.0% |
| !! | GTTTAATTGGCCTTGGTGCA+TGG | - | chr3_1:7022770-7022789 | Msa0346480:five_prime_UTR | 45.0% |
| !! | ACATCTTCTGACATCGACTC+TGG | - | chr3_1:7022961-7022980 | Msa0346480:five_prime_UTR | 45.0% |
| !! | TGACATCGACTCTGGATATC+TGG | - | chr3_1:7022969-7022988 | Msa0346480:five_prime_UTR | 45.0% |
| CTTAAACACAGGTCGTGTCT+TGG | - | chr3_1:7023070-7023089 | Msa0346480:five_prime_UTR | 45.0% | |
| TTTGAAGGATTGGAGGTGAC+TGG | - | chr3_1:7023208-7023227 | Msa0346480:five_prime_UTR | 45.0% | |
| GCGAGAAGTAATGGTTAACC+TGG | + | chr3_1:7023496-7023515 | None:intergenic | 45.0% | |
| ACTGGACTCTCTTCCTAACT+GGG | + | chr3_1:7023523-7023542 | None:intergenic | 45.0% | |
| AGTTAGGAAGAGAGTCCAGT+GGG | - | chr3_1:7023523-7023542 | Msa0346480:five_prime_UTR | 45.0% | |
| CACATTATTGCAAAGCCCAC+TGG | + | chr3_1:7023541-7023560 | None:intergenic | 45.0% | |
| ! | GAAGCTGTTTCGCGAAGCAT+TGG | - | chr3_1:7015113-7015132 | Msa0346480:three_prime_UTR | 50.0% |
| TCGCGACTGTAACAGTGCAT+GGG | + | chr3_1:7015351-7015370 | None:intergenic | 50.0% | |
| TGCCTAACGGTGAGGGATTA+AGG | - | chr3_1:7016754-7016773 | Msa0346480:intron | 50.0% | |
| CTCCTTAATCCCTCACCGTT+AGG | + | chr3_1:7016759-7016778 | None:intergenic | 50.0% | |
| CATGAACTGACCATCACTCG+GGG | + | chr3_1:7017003-7017022 | None:intergenic | 50.0% | |
| GCATGAACTGACCATCACTC+GGG | + | chr3_1:7017004-7017023 | None:intergenic | 50.0% | |
| GGCATGAACTGACCATCACT+CGG | + | chr3_1:7017005-7017024 | None:intergenic | 50.0% | |
| GTGATGGTCAGTTCATGCCA+CGG | - | chr3_1:7017006-7017025 | Msa0346480:intron | 50.0% | |
| CAGTTCATGCCACGGATGAA+AGG | - | chr3_1:7017014-7017033 | Msa0346480:intron | 50.0% | |
| TGCCACGGATGAAAGGAAAG+AGG | - | chr3_1:7017021-7017040 | Msa0346480:intron | 50.0% | |
| GGAGGCCAATAAGGAACAGA+AGG | + | chr3_1:7017625-7017644 | None:intergenic | 50.0% | |
| GGAAATCGAGGAGGCCAATA+AGG | + | chr3_1:7017634-7017653 | None:intergenic | 50.0% | |
| TAGAAGAGGGGAAATCGAGG+AGG | + | chr3_1:7017643-7017662 | None:intergenic | 50.0% | |
| GGTTAGAAGAGGGGAAATCG+AGG | + | chr3_1:7017646-7017665 | None:intergenic | 50.0% | |
| CCGAAAAGGGAGGTTAGAAG+AGG | + | chr3_1:7017657-7017676 | None:intergenic | 50.0% | |
| TATGTCGGCACTCACATGAG+GGG | + | chr3_1:7017726-7017745 | None:intergenic | 50.0% | |
| GTCTCAGCGACTTATGCTAC+CGG | + | chr3_1:7017758-7017777 | None:intergenic | 50.0% | |
| !! | ACACCAGAGGAGTTTTCAGG+AGG | + | chr3_1:7017892-7017911 | None:intergenic | 50.0% |
| GGTGAATTAAGGGACACCAG+AGG | + | chr3_1:7017905-7017924 | None:intergenic | 50.0% | |
| TGCTGTGTAGGTAGCTCAGA+TGG | + | chr3_1:7017926-7017945 | None:intergenic | 50.0% | |
| ! | GGGACACCAGAGGAGTTTTT+AGG | + | chr3_1:7018043-7018062 | None:intergenic | 50.0% |
| GGTGAATTAAGGGACACCAG+AGG | + | chr3_1:7017905-7017924 | None:intergenic | 50.0% | |
| ! | GTGTGCTGCTGGTCCATAAT+TGG | - | chr3_1:7018341-7018360 | Msa0346480:intron | 50.0% |
| GCCCTTCAGATCATGTGCTA+TGG | - | chr3_1:7019021-7019040 | Msa0346480:intron | 50.0% | |
| GGCCATAGCACATGATCTGA+AGG | + | chr3_1:7019026-7019045 | None:intergenic | 50.0% | |
| CAGATCATGTGCTATGGCCT+TGG | - | chr3_1:7019027-7019046 | Msa0346480:intron | 50.0% | |
| AAGAAGCAACCTGACTCCCA+AGG | + | chr3_1:7019047-7019066 | None:intergenic | 50.0% | |
| GTGCACACGTTTCCTATGGT+TGG | - | chr3_1:7019094-7019113 | Msa0346480:intron | 50.0% | |
| GCACACGTTTCCTATGGTTG+GGG | - | chr3_1:7019096-7019115 | Msa0346480:intron | 50.0% | |
| ATATCGCACCAGCAGCTTCA+CGG | + | chr3_1:7019473-7019492 | None:intergenic | 50.0% | |
| !! | GATTGACAGAGGCGTTAGGA+AGG | - | chr3_1:7020248-7020267 | Msa0346480:intron | 50.0% |
| !! | CAGAGGCGTTAGGAAGGATT+TGG | - | chr3_1:7020254-7020273 | Msa0346480:intron | 50.0% |
| !! | GAATGGGTGGTTTGGCTTGA+AGG | - | chr3_1:7020869-7020888 | Msa0346480:intron | 50.0% |
| GTGCTCATTTCGGATTGTCG+AGG | - | chr3_1:7021266-7021285 | Msa0346480:intron | 50.0% | |
| TGTTCAAAATCGGAGGTGGG+TGG | - | chr3_1:7021304-7021323 | Msa0346480:intron | 50.0% | |
| GTTCAAAATCGGAGGTGGGT+GGG | - | chr3_1:7021305-7021324 | Msa0346480:intron | 50.0% | |
| TTCAAAATCGGAGGTGGGTG+GGG | - | chr3_1:7021306-7021325 | Msa0346480:intron | 50.0% | |
| !! | CGTGCGTTACAGCTAGCTTT+AGG | + | chr3_1:7021371-7021390 | None:intergenic | 50.0% |
| AAAGCTAGCTGTAACGCACG+AGG | - | chr3_1:7021371-7021390 | Msa0346480:intron | 50.0% | |
| GATTATGTCCTGGTGCTTGC+AGG | + | chr3_1:7021436-7021455 | None:intergenic | 50.0% | |
| CCATGGGCTTGATTATGTCC+TGG | + | chr3_1:7021446-7021465 | None:intergenic | 50.0% | |
| CCAGGACATAATCAAGCCCA+TGG | - | chr3_1:7021443-7021462 | Msa0346480:intron | 50.0% | |
| AGTTTGCCTAGATGCTGCTG+AGG | - | chr3_1:7021473-7021492 | Msa0346480:intron | 50.0% | |
| !! | GGTTCCCCCCAAAAGGTATT+TGG | - | chr3_1:7021499-7021518 | Msa0346480:intron | 50.0% |
| GATCTCAAGCTCCACGTAGT+AGG | + | chr3_1:7021660-7021679 | None:intergenic | 50.0% | |
| CTTCACAAGTGTCAACCAGG+GGG | - | chr3_1:7021768-7021787 | Msa0346480:intron | 50.0% | |
| GACAAGGTGTACTTCAGGGA+TGG | - | chr3_1:7022738-7022757 | Msa0346480:five_prime_UTR | 50.0% | |
| AGGTGTACTTCAGGGATGGT+TGG | - | chr3_1:7022742-7022761 | Msa0346480:five_prime_UTR | 50.0% | |
| TAATGCTGACCCATGCACCA+AGG | + | chr3_1:7022783-7022802 | None:intergenic | 50.0% | |
| AGACAGATCAGGAGTGGAAG+TGG | - | chr3_1:7022840-7022859 | Msa0346480:five_prime_UTR | 50.0% | |
| CACTCCAAATGATGGCAGCA+TGG | - | chr3_1:7022903-7022922 | Msa0346480:five_prime_UTR | 50.0% | |
| ATCGCCATGCTGCCATCATT+TGG | + | chr3_1:7022910-7022929 | None:intergenic | 50.0% | |
| ACACAGGTCGTGTCTTGGTT+TGG | - | chr3_1:7023075-7023094 | Msa0346480:five_prime_UTR | 50.0% | |
| !! | GTCTTGGTTTGGTTTCTGCG+AGG | - | chr3_1:7023086-7023105 | Msa0346480:five_prime_UTR | 50.0% |
| CTTATGTGCAGCGCGTAACT+TGG | - | chr3_1:7023236-7023255 | Msa0346480:five_prime_UTR | 50.0% | |
| CACTGGACTCTCTTCCTAAC+TGG | + | chr3_1:7023524-7023543 | None:intergenic | 50.0% | |
| CAGTTAGGAAGAGAGTCCAG+TGG | - | chr3_1:7023522-7023541 | Msa0346480:five_prime_UTR | 50.0% | |
| CTCGCGACTGTAACAGTGCA+TGG | + | chr3_1:7015352-7015371 | None:intergenic | 55.0% | |
| GCAATCCTTTCCCCGAGTGA+TGG | - | chr3_1:7016990-7017009 | Msa0346480:intron | 55.0% | |
| ACTGACCATCACTCGGGGAA+AGG | + | chr3_1:7016998-7017017 | None:intergenic | 55.0% | |
| GGCCTCTTTCCTTTCATCCG+TGG | + | chr3_1:7017026-7017045 | None:intergenic | 55.0% | |
| ! | GGGACACCAGAGGAGTTTTC+AGG | + | chr3_1:7017895-7017914 | None:intergenic | 55.0% |
| ACTGGTGGGGAGATTGACAG+AGG | - | chr3_1:7020237-7020256 | Msa0346480:intron | 55.0% | |
| !! | GGGAGATTGACAGAGGCGTT+AGG | - | chr3_1:7020244-7020263 | Msa0346480:intron | 55.0% |
| TGCAGGCCTTTGCCTTGGTT+AGG | - | chr3_1:7021171-7021190 | Msa0346480:intron | 55.0% | |
| TGGGTGGGGATCTCTTTGCA+AGG | - | chr3_1:7021320-7021339 | Msa0346480:intron | 55.0% | |
| GATCTCTTTGCAAGGCGCGT+AGG | - | chr3_1:7021328-7021347 | Msa0346480:intron | 55.0% | |
| AGGGAATAGGGACATGCCTC+AGG | + | chr3_1:7021416-7021435 | None:intergenic | 55.0% | |
| CCTGGTGCTTGCAGGGAATA+GGG | + | chr3_1:7021428-7021447 | None:intergenic | 55.0% | |
| TCCTGGTGCTTGCAGGGAAT+AGG | + | chr3_1:7021429-7021448 | None:intergenic | 55.0% | |
| GCAGCGCGTAACTTGGTCAA+AGG | - | chr3_1:7023243-7023262 | Msa0346480:five_prime_UTR | 55.0% | |
| ! | CTGGGCACTGCGAGAAGTAA+TGG | + | chr3_1:7023505-7023524 | None:intergenic | 55.0% |
| ACTTCTCGCAGTGCCCAGTT+AGG | - | chr3_1:7023507-7023526 | Msa0346480:five_prime_UTR | 55.0% | |
| TCAGGGACTCCCGAAAAGGG+AGG | + | chr3_1:7017667-7017686 | None:intergenic | 60.0% | |
| ! | GTGCTATGGCCTTGGGAGTC+AGG | - | chr3_1:7019035-7019054 | Msa0346480:intron | 60.0% |
| GTCAAGGACCGTGAAGCTGC+TGG | - | chr3_1:7019462-7019481 | Msa0346480:intron | 60.0% | |
| ACCAAGGCAAAGGCCTGCAG+TGG | + | chr3_1:7021170-7021189 | None:intergenic | 60.0% | |
| CCCTATTCCCTGCAAGCACC+AGG | - | chr3_1:7021425-7021444 | Msa0346480:intron | 60.0% | |
| TGCCTAGATGCTGCTGAGGC+AGG | - | chr3_1:7021477-7021496 | Msa0346480:intron | 60.0% | |
| GCCTAGATGCTGCTGAGGCA+GGG | - | chr3_1:7021478-7021497 | Msa0346480:intron | 60.0% | |
| ACCCTGCCTCAGCAGCATCT+AGG | + | chr3_1:7021482-7021501 | None:intergenic | 60.0% | |
| GCCACTGCAGGCCTTTGCCT+TGG | - | chr3_1:7021166-7021185 | Msa0346480:intron | 65.0% | |
| GAGGCAGGGTTCCCCCCAAA+AGG | - | chr3_1:7021492-7021511 | Msa0346480:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 7015066 | 7023907 | 7015066 | ID=Msa0346480;Name=Msa0346480 |
| chr3_1 | mRNA | 7015066 | 7023907 | 7015066 | ID=Msa0346480-mRNA-1;Parent=Msa0346480;Name=Msa0346480-mRNA-1;_AED=0.18;_eAED=0.18;_QI=3119|1|1|1|0.33|0.3|10|597|99 |
| chr3_1 | exon | 7015066 | 7015552 | 7015066 | ID=Msa0346480-mRNA-1:exon:1975;Parent=Msa0346480-mRNA-1 |
| chr3_1 | exon | 7015651 | 7015892 | 7015651 | ID=Msa0346480-mRNA-1:exon:1974;Parent=Msa0346480-mRNA-1 |
| chr3_1 | exon | 7015983 | 7016352 | 7015983 | ID=Msa0346480-mRNA-1:exon:1973;Parent=Msa0346480-mRNA-1 |
| chr3_1 | exon | 7017288 | 7017373 | 7017288 | ID=Msa0346480-mRNA-1:exon:1972;Parent=Msa0346480-mRNA-1 |
| chr3_1 | exon | 7017460 | 7017797 | 7017460 | ID=Msa0346480-mRNA-1:exon:1971;Parent=Msa0346480-mRNA-1 |
| chr3_1 | exon | 7017883 | 7018305 | 7017883 | ID=Msa0346480-mRNA-1:exon:1970;Parent=Msa0346480-mRNA-1 |
| chr3_1 | exon | 7018657 | 7018747 | 7018657 | ID=Msa0346480-mRNA-1:exon:1969;Parent=Msa0346480-mRNA-1 |
| chr3_1 | exon | 7019469 | 7019548 | 7019469 | ID=Msa0346480-mRNA-1:exon:1968;Parent=Msa0346480-mRNA-1 |
| chr3_1 | exon | 7021903 | 7021996 | 7021903 | ID=Msa0346480-mRNA-1:exon:1967;Parent=Msa0346480-mRNA-1 |
| chr3_1 | exon | 7022103 | 7023907 | 7022103 | ID=Msa0346480-mRNA-1:exon:1966;Parent=Msa0346480-mRNA-1 |
| chr3_1 | five_prime_UTR | 7022103 | 7023907 | 7022103 | ID=Msa0346480-mRNA-1:five_prime_utr;Parent=Msa0346480-mRNA-1 |
| chr3_1 | five_prime_UTR | 7021903 | 7021996 | 7021903 | ID=Msa0346480-mRNA-1:five_prime_utr;Parent=Msa0346480-mRNA-1 |
| chr3_1 | five_prime_UTR | 7019469 | 7019548 | 7019469 | ID=Msa0346480-mRNA-1:five_prime_utr;Parent=Msa0346480-mRNA-1 |
| chr3_1 | five_prime_UTR | 7018657 | 7018747 | 7018657 | ID=Msa0346480-mRNA-1:five_prime_utr;Parent=Msa0346480-mRNA-1 |
| chr3_1 | five_prime_UTR | 7017883 | 7018305 | 7017883 | ID=Msa0346480-mRNA-1:five_prime_utr;Parent=Msa0346480-mRNA-1 |
| chr3_1 | five_prime_UTR | 7017460 | 7017797 | 7017460 | ID=Msa0346480-mRNA-1:five_prime_utr;Parent=Msa0346480-mRNA-1 |
| chr3_1 | five_prime_UTR | 7017288 | 7017373 | 7017288 | ID=Msa0346480-mRNA-1:five_prime_utr;Parent=Msa0346480-mRNA-1 |
| chr3_1 | five_prime_UTR | 7016151 | 7016352 | 7016151 | ID=Msa0346480-mRNA-1:five_prime_utr;Parent=Msa0346480-mRNA-1 |
| chr3_1 | CDS | 7015983 | 7016150 | 7015983 | ID=Msa0346480-mRNA-1:cds;Parent=Msa0346480-mRNA-1 |
| chr3_1 | CDS | 7015761 | 7015892 | 7015761 | ID=Msa0346480-mRNA-1:cds;Parent=Msa0346480-mRNA-1 |
| chr3_1 | three_prime_UTR | 7015651 | 7015760 | 7015651 | ID=Msa0346480-mRNA-1:three_prime_utr;Parent=Msa0346480-mRNA-1 |
| chr3_1 | three_prime_UTR | 7015066 | 7015552 | 7015066 | ID=Msa0346480-mRNA-1:three_prime_utr;Parent=Msa0346480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
