AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0354350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0354350 MtrunA17_Chr3g0089841 94.411 501 26 1 1 499 1 501 0.0 913
Msa0354350 MtrunA17_Chr3g0109701 27.183 504 301 16 1 470 20 491 6.55e-38 145
Msa0354350 MtrunA17_Chr5g0442341 28.802 434 261 15 33 444 53 460 2.80e-33 132
Msa0354350 MtrunA17_Chr3g0100181 26.362 459 279 20 4 431 156 586 7.43e-31 127
Msa0354350 MtrunA17_Chr3g0095231 27.669 459 281 18 33 468 53 483 8.43e-31 125
Msa0354350 MtrunA17_Chr6g0484711 25.773 485 293 17 2 446 215 672 8.74e-31 126
Msa0354350 MtrunA17_Chr8g0360771 24.601 439 277 17 33 442 187 600 1.15e-23 105
Msa0354350 MtrunA17_Chr1g0171381 26.378 254 162 9 196 431 392 638 1.25e-21 99.0
Msa0354350 MtrunA17_Chr1g0155921 26.357 258 177 7 229 481 1134 1383 1.12e-20 96.3
Msa0354350 MtrunA17_Chr3g0142301 26.295 251 171 7 215 454 1113 1360 1.75e-20 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0354350 AT5G13700.1 75.615 447 95 2 23 469 20 452 0.0 707
Msa0354350 AT3G59050.1 27.609 460 274 16 1 431 23 452 2.10e-41 155
Msa0354350 AT1G65840.1 28.285 449 284 13 6 435 28 457 1.38e-39 150
Msa0354350 AT2G43020.1 27.816 435 267 15 20 431 41 451 2.13e-36 141
Msa0354350 AT1G62830.1 25.319 470 292 18 8 444 267 710 2.92e-29 122
Msa0354350 AT3G10390.1 24.895 474 302 20 4 448 182 630 1.28e-28 120
Msa0354350 AT3G10390.4 24.895 474 302 20 4 448 182 630 1.29e-28 120
Msa0354350 AT3G10390.2 24.895 474 302 20 4 448 234 682 1.45e-28 120
Msa0354350 AT3G10390.3 24.895 474 302 20 4 448 234 682 1.73e-28 120
Msa0354350 AT4G16310.2 26.568 271 176 6 190 454 865 1118 2.70e-24 107
Msa0354350 AT4G16310.3 26.568 271 176 6 190 454 865 1118 2.70e-24 107
Msa0354350 AT4G16310.5 26.568 271 176 6 190 454 865 1118 2.70e-24 107
Msa0354350 AT4G16310.1 26.568 271 176 6 190 454 865 1118 2.70e-24 107
Msa0354350 AT4G16310.4 26.568 271 176 6 190 454 865 1118 2.70e-24 107
Msa0354350 AT3G13682.1 28.634 454 267 21 8 431 161 587 2.83e-23 104

Find 144 sgRNAs with CRISPR-Local

Find 711 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGATATTGGAGACTGTTTC+TGG 0.094196 3_1:+25414296 None:intergenic
ATATCTACATATGTAGATTT+TGG 0.133651 3_1:-25422948 Msa0354350:CDS
CTCTTCTCTCACACATTTCA+TGG 0.203556 3_1:-25425030 Msa0354350:exon
CTTCCTTATTTCTTCTACTA+AGG 0.243305 3_1:+25414400 None:intergenic
TATAGTCATAATATGGCTTC+TGG 0.249282 3_1:+25414224 None:intergenic
GGAGAGGCTATTACACATTT+TGG 0.259480 3_1:-25418430 Msa0354350:CDS
CACACCAGTGAAAGATTTAA+TGG 0.270263 3_1:-25414813 Msa0354350:CDS
TGAAGTTTCCGTATAGGTTT+TGG 0.285338 3_1:-25418496 Msa0354350:CDS
CTTGTATTGCAAGTAAAATT+AGG 0.292745 3_1:+25413890 None:intergenic
CGATTACTTGCTATACAAAA+TGG 0.298129 3_1:-25422889 Msa0354350:CDS
AATATCGCATTTGTGGATAT+TGG 0.304813 3_1:+25414283 None:intergenic
TGCTTTGTTGCCATCATCAT+TGG 0.306407 3_1:+25423782 None:intergenic
TTCTTGAATGTTGCAATTCC+CGG 0.314171 3_1:+25420346 None:intergenic
AAGCCTTAGTAGAAGAAATA+AGG 0.318756 3_1:-25414403 Msa0354350:CDS
AACAGACAGAATCACATAAT+TGG 0.318861 3_1:+25420281 None:intergenic
TTAGTTCATTCCACTCCTAA+TGG 0.327824 3_1:-25414034 Msa0354350:three_prime_UTR
CGTCGAAGACATAGTGATTC+TGG 0.330057 3_1:-25424812 Msa0354350:CDS
TTCCCCGCTGGTGGAATAAC+AGG 0.331812 3_1:-25416285 Msa0354350:CDS
AACTCCATATAGTCATAATA+TGG 0.338518 3_1:+25414217 None:intergenic
CTCGGTGCCGGTTGGATCGC+TGG 0.340198 3_1:-25424727 Msa0354350:CDS
AAATCTACATATGTAGATAT+TGG 0.354394 3_1:+25422951 None:intergenic
CAATGTCACGACTAAGATAT+TGG 0.355167 3_1:+25416426 None:intergenic
AAGGTTCCAACAATAGAGTT+TGG 0.355586 3_1:+25414354 None:intergenic
TCTTTCTGAAGTTTCCGTAT+AGG 0.358661 3_1:-25418502 Msa0354350:CDS
TAGTCGTGACATTGACTAAT+GGG 0.362163 3_1:-25416417 Msa0354350:CDS
CCACATGGCCAAAACCTATA+CGG 0.371294 3_1:+25418488 None:intergenic
GAAGCCATATTATGACTATA+TGG 0.371310 3_1:-25414221 Msa0354350:exon
ACTTTACGATTGGAGATAAT+CGG 0.378806 3_1:+25416235 None:intergenic
GCGAAAGTTACCGGAGATTC+CGG 0.379873 3_1:+25424971 None:intergenic
TACGGATCCTGCCGCCGATT+CGG 0.390118 3_1:+25424779 None:intergenic
TAGATTGATTGACAAAATAC+TGG 0.391689 3_1:-25414115 Msa0354350:three_prime_UTR
GTCGTGAAGCTAATCCTGTT+TGG 0.396223 3_1:-25424696 Msa0354350:CDS
TTAACCTAGTTGGCTCCATT+AGG 0.400382 3_1:+25414019 None:intergenic
GCGAGTTCTACTGGCGTCTT+AGG 0.406999 3_1:+25423564 None:intergenic
TATATGTTGGTGAGGTTAAG+AGG 0.410503 3_1:-25414089 Msa0354350:three_prime_UTR
AAATCAATGGCGAGTTCTAC+TGG 0.413846 3_1:+25423555 None:intergenic
TTAGTCGTGACATTGACTAA+TGG 0.414836 3_1:-25416418 Msa0354350:CDS
GTGAAGAAAATGCGACCAAC+AGG 0.420723 3_1:+25414843 None:intergenic
GAGAAGCTATGGCGGTGCTC+AGG 0.428843 3_1:-25416351 Msa0354350:CDS
CGGAAACTTCAGAAAGATCT+TGG 0.431867 3_1:+25418508 None:intergenic
TCGTGAAGCTAATCCTGTTT+GGG 0.433490 3_1:-25424695 Msa0354350:CDS
GATGACGGAGGAGCGATTAG+AGG 0.434555 3_1:+25425004 None:intergenic
TGAAAGCCAAACTCTATTGT+TGG 0.437206 3_1:-25414360 Msa0354350:CDS
GTCAATAGCATCGGGGATGT+TGG 0.437825 3_1:+25416315 None:intergenic
ATTATAAGAATCGTAATTGA+TGG 0.444001 3_1:-25414175 Msa0354350:three_prime_UTR
ATAAGTAAGATTACAATGTA+AGG 0.447759 3_1:-25413936 Msa0354350:three_prime_UTR
CACTCCTAATGGAGCCAACT+AGG 0.452521 3_1:-25414023 Msa0354350:three_prime_UTR
TCAATAGCATCGGGGATGTT+GGG 0.456466 3_1:+25416316 None:intergenic
GAATTGCAACATTCAAGAAA+TGG 0.457567 3_1:-25420342 Msa0354350:CDS
ATGGAATTATACAGGTCGTC+CGG 0.460415 3_1:-25420365 Msa0354350:intron
ATAGTCATAATATGGCTTCT+GGG 0.463515 3_1:+25414225 None:intergenic
CGGTGGAACTCGGTGCCGGT+TGG 0.464338 3_1:-25424735 Msa0354350:CDS
CATTACATCACATTTCTCAA+TGG 0.466921 3_1:+25418538 None:intergenic
TTGGCCATGTGGACCCGAAA+AGG 0.467710 3_1:-25418477 Msa0354350:CDS
TTATATCTGAGTGGCAAGCT+TGG 0.468336 3_1:-25414251 Msa0354350:CDS
ATCATCGGCGCCGGAATCTC+CGG 0.471467 3_1:-25424981 Msa0354350:intron
GCCGGTTGGATCGCTGGTGT+TGG 0.475999 3_1:-25424721 Msa0354350:CDS
ACAAGTATGTCAATAGCATC+GGG 0.478636 3_1:+25416307 None:intergenic
GAACCTTTGCTAGCATTGAC+AGG 0.480559 3_1:-25414338 Msa0354350:CDS
TCTTTCACTGGTGTGCTCTC+CGG 0.484186 3_1:+25414821 None:intergenic
GCGGTGCTCAGGGATATGTT+TGG 0.484250 3_1:-25416340 Msa0354350:CDS
GTGTAGGAATATCGCATTTG+TGG 0.485006 3_1:+25414276 None:intergenic
CACATCGGAAGGTAGAATCT+TGG 0.485410 3_1:-25422850 Msa0354350:CDS
TACTGGTAAGGGTGGATTGA+AGG 0.489901 3_1:+25420227 None:intergenic
TCAACAGCGAGTTCCCAAAC+AGG 0.493183 3_1:+25424682 None:intergenic
GACTTTCTCTTCACATCGGA+AGG 0.497849 3_1:-25422861 Msa0354350:CDS
ATTGAGAAAACGTACTGGTA+AGG 0.498411 3_1:+25420215 None:intergenic
TTCTCTCAAGGTCTCTTCAT+CGG 0.500684 3_1:+25416369 None:intergenic
GTGATTCTGTCTGTTAGCAT+TGG 0.501514 3_1:-25420273 Msa0354350:CDS
CACGACTAAGATATTGGAGC+CGG 0.502176 3_1:+25416432 None:intergenic
TATATCTTTCAGGCTCCTGT+TGG 0.504815 3_1:-25414858 Msa0354350:intron
CGCTCCTCCGTCATCATCAT+CGG 0.505916 3_1:-25424996 Msa0354350:CDS
AGGATCCGTAAGGAATGTTT+CGG 0.507515 3_1:-25424766 Msa0354350:CDS
CTGGAAGCGTCGGACCGAAT+CGG 0.507596 3_1:-25424793 Msa0354350:CDS
ATATCCATTAAATCTTTCAC+TGG 0.511525 3_1:+25414809 None:intergenic
TCCAACACCAGCGATCCAAC+CGG 0.512194 3_1:+25424720 None:intergenic
TTGACATACTTGTTCCCCGC+TGG 0.514737 3_1:-25416297 Msa0354350:CDS
CGTCGGACCGAATCGGCGGC+AGG 0.516972 3_1:-25424786 Msa0354350:CDS
AACAAGTATGTCAATAGCAT+CGG 0.517386 3_1:+25416306 None:intergenic
GTGTCGGTGGAACTCGGTGC+CGG 0.518469 3_1:-25424739 Msa0354350:CDS
GGAGTTGTAGAGAATCCTCT+TGG 0.518489 3_1:-25414200 Msa0354350:three_prime_UTR
GCGAAAGTGTTAGCCGAAAA+CGG 0.521957 3_1:-25424835 Msa0354350:CDS
AGAAGCTATGGCGGTGCTCA+GGG 0.523544 3_1:-25416350 Msa0354350:CDS
ACATACTTGTTCCCCGCTGG+TGG 0.527068 3_1:-25416294 Msa0354350:CDS
TCCGTCATCATCATCGGCGC+CGG 0.529667 3_1:-25424990 Msa0354350:CDS
AAACCTGTTATTCCACCAGC+GGG 0.532910 3_1:+25416282 None:intergenic
GATTTGCTTAACATTATAGC+GGG 0.532975 3_1:+25425090 None:intergenic
GGTGGCGTGTCGGTGGAACT+CGG 0.534783 3_1:-25424745 Msa0354350:CDS
TTGGTGAGGTTAAGAGGTGA+TGG 0.535422 3_1:-25414083 Msa0354350:three_prime_UTR
TTGAGAAAACGTACTGGTAA+GGG 0.538437 3_1:+25420216 None:intergenic
CACATGGATAATGCATATCC+CGG 0.542495 3_1:-25416451 Msa0354350:CDS
TGGAATTATACAGGTCGTCC+GGG 0.549725 3_1:-25420364 Msa0354350:intron
GATGATGAAGCCAATGATGA+TGG 0.554008 3_1:-25423792 Msa0354350:CDS
ACATTCAAGAAATGGTGTTA+CGG 0.556836 3_1:-25420334 Msa0354350:CDS
ATGTTTCGGTGGCGTGTCGG+TGG 0.559971 3_1:-25424752 Msa0354350:CDS
CGCCACCGAAACATTCCTTA+CGG 0.564803 3_1:+25424761 None:intergenic
CCACTCAGATATAATTGTGT+AGG 0.567769 3_1:+25414260 None:intergenic
AAATGGTGTTACGGTGATCA+CGG 0.568810 3_1:-25420325 Msa0354350:CDS
AGAGACCTTGAGAGAAGCTA+TGG 0.571528 3_1:-25416362 Msa0354350:CDS
ATCATGCAGAATGAAATCAA+TGG 0.573821 3_1:+25423542 None:intergenic
GGTTGGATCGCTGGTGTTGG+AGG 0.575776 3_1:-25424718 Msa0354350:CDS
AGATTTAATGGATATGTACA+TGG 0.576830 3_1:-25414801 Msa0354350:CDS
GCTTCAACATCTATGATCAA+AGG 0.581866 3_1:-25424618 Msa0354350:intron
CATCATTGCATGGTGAGTCA+TGG 0.582682 3_1:-25414143 Msa0354350:three_prime_UTR
CATTGAGAAATGTGATGTAA+TGG 0.583606 3_1:-25418537 Msa0354350:CDS
GGAATGTTTCGGTGGCGTGT+CGG 0.591455 3_1:-25424755 Msa0354350:CDS
ACGACTAAGATATTGGAGCC+GGG 0.601492 3_1:+25416433 None:intergenic
GATCCTGTCAATGCTAGCAA+AGG 0.602229 3_1:+25414335 None:intergenic
AAAATACTGGAAGTATATGT+TGG 0.608134 3_1:-25414102 Msa0354350:three_prime_UTR
AGGGTGGATTGAAGGCAAGT+AGG 0.612427 3_1:+25420235 None:intergenic
AGAATTTGCACTTACAACGA+CGG 0.612960 3_1:+25423753 None:intergenic
AATCGGCGGCAGGATCCGTA+AGG 0.614605 3_1:-25424776 Msa0354350:CDS
CTAGTTGGCTCCATTAGGAG+TGG 0.614630 3_1:+25414024 None:intergenic
CATAGTGATTCTGGAAGCGT+CGG 0.615402 3_1:-25424803 Msa0354350:CDS
GAGTCAGCAGCGATTCCACT+CGG 0.620752 3_1:+25423870 None:intergenic
ACTGGAAGTATATGTTGGTG+AGG 0.625538 3_1:-25414097 Msa0354350:three_prime_UTR
AGAAAACGTACTGGTAAGGG+TGG 0.625810 3_1:+25420219 None:intergenic
GTACATGGCGGATATCTCGC+AGG 0.628156 3_1:-25414786 Msa0354350:intron
TGATTTGCTTAACATTATAG+CGG 0.629449 3_1:+25425089 None:intergenic
GTTACGGTGATCACGGAAGA+TGG 0.630346 3_1:-25420318 Msa0354350:CDS
ATCCGTAAGGAATGTTTCGG+TGG 0.632872 3_1:-25424763 Msa0354350:CDS
ATCTATGCTCACGAGCGGAG+AGG 0.634203 3_1:-25418446 Msa0354350:CDS
CACCGCCATAGCTTCTCTCA+AGG 0.636491 3_1:+25416357 None:intergenic
TAATGGGGAATCAAAACGCG+TGG 0.637303 3_1:-25416401 Msa0354350:CDS
GAAGCGTCGGACCGAATCGG+CGG 0.639310 3_1:-25424790 Msa0354350:CDS
TGAAGACTTTCTCTTCACAT+CGG 0.644219 3_1:-25422865 Msa0354350:CDS
CGATTCTTATAATTTCCAAG+AGG 0.645431 3_1:+25414185 None:intergenic
GACCTTGAGAGAAGCTATGG+CGG 0.651467 3_1:-25416359 Msa0354350:CDS
TCCGGCGCCGATGATGATGA+CGG 0.653886 3_1:+25424989 None:intergenic
ATCTTAACAGGTATTGACAC+AGG 0.654307 3_1:-25414428 Msa0354350:intron
TGGTGAGGTTAAGAGGTGAT+GGG 0.658676 3_1:-25414082 Msa0354350:three_prime_UTR
GTATGAGAATCATCATTGCA+TGG 0.661302 3_1:-25414153 Msa0354350:three_prime_UTR
AGTCGTGACATTGACTAATG+GGG 0.663310 3_1:-25416416 Msa0354350:CDS
TCTTCATCTATGCTCACGAG+CGG 0.668267 3_1:-25418451 Msa0354350:CDS
GAAACCTGTTATTCCACCAG+CGG 0.675023 3_1:+25416281 None:intergenic
CTGATTTGAAGGTATCTCTG+CGG 0.685392 3_1:-25424857 Msa0354350:intron
AGTGGAAAGTTAATTCCGAG+TGG 0.687576 3_1:-25423885 Msa0354350:CDS
TGATCGTCTCAAACTCAACA+AGG 0.693245 3_1:-25422826 Msa0354350:intron
GGCGCCGATGATGATGACGG+AGG 0.694860 3_1:+25424992 None:intergenic
CCTACACAATTATATCTGAG+TGG 0.695407 3_1:-25414260 Msa0354350:CDS
TTTAATGGATATGTACATGG+CGG 0.732094 3_1:-25414798 Msa0354350:CDS
CAAGTATGTCAATAGCATCG+GGG 0.762193 3_1:+25416308 None:intergenic
TGGAATAACAGGTTTCAGCG+CGG 0.786015 3_1:-25416274 Msa0354350:CDS
AACCTGTTATTCCACCAGCG+GGG 0.800283 3_1:+25416283 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAATAAAATAAAAA+AGG + chr3_1:25417486-25417505 None:intergenic 0.0%
!! TAAAATTTATAATTATTTAA+GGG + chr3_1:25420127-25420146 None:intergenic 0.0%
!! TTAAAATTTATAATTATTTA+AGG + chr3_1:25420128-25420147 None:intergenic 0.0%
!!! TTTTTATTTTTATTTTTAAT+AGG + chr3_1:25420703-25420722 None:intergenic 0.0%
!! AAATAAATAAATAAATATTT+AGG + chr3_1:25421887-25421906 None:intergenic 0.0%
!!! TTATTTATTTATTTATATTT+TGG - chr3_1:25421893-25421912 Msa0354350:intron 0.0%
!! AGAAATTAAATAAAAAAAGT+AGG + chr3_1:25414972-25414991 None:intergenic 10.0%
!!! TAAAAATGATTATTTCTTTT+TGG + chr3_1:25415632-25415651 None:intergenic 10.0%
!!! TTTTGATTACTTTTATTTTA+AGG - chr3_1:25416627-25416646 Msa0354350:intron 10.0%
!!! AAATTTTATTTTTCTCATTA+GGG - chr3_1:25420649-25420668 Msa0354350:intron 10.0%
!! TAATAATTAATTCAAAATTG+TGG - chr3_1:25421494-25421513 Msa0354350:intron 10.0%
!! TTTATAATATTAAGGTAATA+AGG - chr3_1:25422753-25422772 Msa0354350:intron 10.0%
!! AAAATTGTAAAAAAAAATTC+GGG - chr3_1:25423386-25423405 Msa0354350:intron 10.0%
!! TATTTGATTCATAATTTAAT+GGG + chr3_1:25423760-25423779 None:intergenic 10.0%
!! TTATTTGATTCATAATTTAA+TGG + chr3_1:25423761-25423780 None:intergenic 10.0%
!! CTAAAAAGAAAATGAAAAAA+TGG + chr3_1:25414402-25414421 None:intergenic 15.0%
!!! TAAACTTATTTTTTTAGTTG+TGG + chr3_1:25414615-25414634 None:intergenic 15.0%
!!! CTGTTTTTATGATTTTATAT+CGG - chr3_1:25414707-25414726 Msa0354350:intron 15.0%
!! AAAAAAAGTAGGAAAAAAAA+CGG + chr3_1:25414961-25414980 None:intergenic 15.0%
!!! AATTTCTTTTTTTTTTCTTC+TGG - chr3_1:25414985-25415004 Msa0354350:intron 15.0%
!! TAAAAGTAAACATTTCAAAA+AGG + chr3_1:25415311-25415330 None:intergenic 15.0%
!! CAATATAAAGAAACAAAAAA+AGG + chr3_1:25415340-25415359 None:intergenic 15.0%
!! AAGTTCAAAATTTGTATTTA+TGG - chr3_1:25415793-25415812 Msa0354350:intron 15.0%
!! AGTTCAAAATTTGTATTTAT+GGG - chr3_1:25415794-25415813 Msa0354350:intron 15.0%
!!! GATTTTTACTTTGTTAAAAA+AGG - chr3_1:25416196-25416215 Msa0354350:intron 15.0%
!!! TGTTAAAAAAGGATTTTTTT+TGG - chr3_1:25416207-25416226 Msa0354350:intron 15.0%
!!! ATTTTTTTTTACAAGCTAAA+TGG + chr3_1:25416283-25416302 None:intergenic 15.0%
!!! TATTATTTTATTGAAGAAAG+TGG + chr3_1:25416926-25416945 None:intergenic 15.0%
!! ACTTTCTTCAATAAAATAAT+AGG - chr3_1:25416925-25416944 Msa0354350:intron 15.0%
!! TAAAATGAACATATTATGAA+TGG - chr3_1:25417101-25417120 Msa0354350:intron 15.0%
!! TGTTGTATACAATAAAATAA+TGG - chr3_1:25417382-25417401 Msa0354350:intron 15.0%
!! GTATATCAATAATAATTCAT+TGG + chr3_1:25418028-25418047 None:intergenic 15.0%
!! TTAAATCTCAAATTCAAATT+CGG + chr3_1:25418097-25418116 None:intergenic 15.0%
!!! TTTTGAATAATGAAGAAAAA+TGG + chr3_1:25418321-25418340 None:intergenic 15.0%
!! ACTTAACAAGAATATAAATA+TGG - chr3_1:25419977-25419996 Msa0354350:intron 15.0%
!! TCATCAAATTAAACAATTAT+GGG - chr3_1:25420218-25420237 Msa0354350:intron 15.0%
!!! TTGTTTTAAATTTTCCTTAA+TGG - chr3_1:25420561-25420580 Msa0354350:intron 15.0%
!! AAAATAAAATTTCTTCAAAC+TGG + chr3_1:25420641-25420660 None:intergenic 15.0%
!!! GAAATTTTATTTTTCTCATT+AGG - chr3_1:25420648-25420667 Msa0354350:intron 15.0%
!!! ATGATGAATTTTTAACAATT+TGG - chr3_1:25421721-25421740 Msa0354350:intron 15.0%
!!! TAAAACCAGTTTTTTATATA+TGG - chr3_1:25421814-25421833 Msa0354350:intron 15.0%
!! TATTATCAATATAAGACAAA+TGG + chr3_1:25421981-25422000 None:intergenic 15.0%
!! GATAATATTAATTATTTCCT+AGG - chr3_1:25421994-25422013 Msa0354350:intron 15.0%
!!! AATTGTTTTCTTATTTCATA+TGG - chr3_1:25422159-25422178 Msa0354350:intron 15.0%
!! ATTATAAAAAACTTTACGAT+TGG + chr3_1:25422741-25422760 None:intergenic 15.0%
!!! TAGTTTGAAATTTTGATTAT+TGG + chr3_1:25423846-25423865 None:intergenic 15.0%
!!! ATTGAACTTTTAAAATTGAA+AGG - chr3_1:25424034-25424053 Msa0354350:intron 15.0%
!! AAAAATGACAATTAACATAA+GGG + chr3_1:25424085-25424104 None:intergenic 15.0%
!! AAAAAATGACAATTAACATA+AGG + chr3_1:25424086-25424105 None:intergenic 15.0%
!!! GTTTTTCTTTAAATGTTAAA+AGG + chr3_1:25424265-25424284 None:intergenic 15.0%
!! TAAATTCATATAAATATGTG+AGG + chr3_1:25424501-25424520 None:intergenic 15.0%
!!! ATGATTTATCGAGTTTTTTT+TGG - chr3_1:25414545-25414564 Msa0354350:intron 20.0%
!! TGAGAAAATAACTAAGTTAT+CGG + chr3_1:25414824-25414843 None:intergenic 20.0%
!!! ACATAACAAAATCGTTTTAA+CGG + chr3_1:25415253-25415272 None:intergenic 20.0%
!!! TTTTTTCCTGTTACTATTTT+AGG - chr3_1:25415373-25415392 Msa0354350:intron 20.0%
!! TTATCTACTCAATCAAATTA+TGG + chr3_1:25415726-25415745 None:intergenic 20.0%
!! ATAATTTGATTGAGTAGATA+AGG - chr3_1:25415725-25415744 Msa0354350:intron 20.0%
!! TAATTTGATTGAGTAGATAA+GGG - chr3_1:25415726-25415745 Msa0354350:intron 20.0%
!! AAATCTACATATGTAGATAT+TGG + chr3_1:25416015-25416034 None:intergenic 20.0%
!!! ATATCTACATATGTAGATTT+TGG - chr3_1:25416015-25416034 Msa0354350:intron 20.0%
!!! TATCTACATATGTAGATTTT+GGG - chr3_1:25416016-25416035 Msa0354350:intron 20.0%
!! TAAAAATCTCAATCAAAGAA+AGG + chr3_1:25416184-25416203 None:intergenic 20.0%
!! AAGATAACAAAATAGCAAAA+GGG + chr3_1:25416338-25416357 None:intergenic 20.0%
!!! AAACAATGACAATAACTTTT+AGG - chr3_1:25416792-25416811 Msa0354350:intron 20.0%
!!! ATTTTTTTTGCTCTCTTTTA+GGG + chr3_1:25417190-25417209 None:intergenic 20.0%
!!! AATTTTTTTTGCTCTCTTTT+AGG + chr3_1:25417191-25417210 None:intergenic 20.0%
!!! AATGGTCTAATATTTTAACT+GGG + chr3_1:25417241-25417260 None:intergenic 20.0%
!!! TAATGGTCTAATATTTTAAC+TGG + chr3_1:25417242-25417261 None:intergenic 20.0%
!!! ACCATTAAGAAGTTTTTATA+GGG - chr3_1:25417255-25417274 Msa0354350:intron 20.0%
!! AAATATAAGAAAGATGTCAT+AGG + chr3_1:25417534-25417553 None:intergenic 20.0%
!! AGATAGAAGATATTAATTGT+GGG + chr3_1:25417797-25417816 None:intergenic 20.0%
!!! AACTATGATTTTATTTTGCA+TGG - chr3_1:25418579-25418598 Msa0354350:intron 20.0%
!!! ACCAATAATATTTAAGACTA+GGG + chr3_1:25419027-25419046 None:intergenic 20.0%
!!! AACCAATAATATTTAAGACT+AGG + chr3_1:25419028-25419047 None:intergenic 20.0%
!!! TAGTCTTAAATATTATTGGT+TGG - chr3_1:25419027-25419046 Msa0354350:intron 20.0%
!!! AGTCTTAAATATTATTGGTT+GGG - chr3_1:25419028-25419047 Msa0354350:intron 20.0%
!! ATAGCTCACTATATTTATTT+AGG - chr3_1:25419816-25419835 Msa0354350:intron 20.0%
!! GTCATCAAATTAAACAATTA+TGG - chr3_1:25420217-25420236 Msa0354350:intron 20.0%
!!! TTTCATTATTTTATCCATCA+TGG + chr3_1:25420386-25420405 None:intergenic 20.0%
!! AACAGAATTAAAATCTCTTA+AGG - chr3_1:25420766-25420785 Msa0354350:intron 20.0%
!!! AGTGTGATTGAAATTTTATA+TGG + chr3_1:25420818-25420837 None:intergenic 20.0%
!!! TATTCTATTTTTCTGTTTGA+AGG + chr3_1:25421159-25421178 None:intergenic 20.0%
!! ACTGATAATTAACTCATATT+TGG + chr3_1:25421693-25421712 None:intergenic 20.0%
!! AACAAAATATACAAATGCTA+TGG + chr3_1:25421754-25421773 None:intergenic 20.0%
!!! GTTTTATCAATTTTAGTCTT+CGG + chr3_1:25421800-25421819 None:intergenic 20.0%
!! AATATAAGACAAATGGTAAT+AGG + chr3_1:25421974-25421993 None:intergenic 20.0%
!! ATATTAATTATTTCCTAGGA+AGG - chr3_1:25421998-25422017 Msa0354350:intron 20.0%
!! TGAAATAAGAAAACAATTCA+AGG + chr3_1:25422157-25422176 None:intergenic 20.0%
!!! ACTATAGTTTGAAATATGTT+AGG + chr3_1:25422197-25422216 None:intergenic 20.0%
!! ACATAATATTGTAATTGTCT+AGG - chr3_1:25422436-25422455 Msa0354350:intron 20.0%
!! AAGAACAGAAAATATTCAAA+GGG + chr3_1:25422830-25422849 None:intergenic 20.0%
!! TAAGAACAGAAAATATTCAA+AGG + chr3_1:25422831-25422850 None:intergenic 20.0%
!! TTAAGCCTATATTTAATTCA+GGG + chr3_1:25423040-25423059 None:intergenic 20.0%
!! TTTAAGCCTATATTTAATTC+AGG + chr3_1:25423041-25423060 None:intergenic 20.0%
!!! CTGAAAAAACTGAAATTTTT+CGG - chr3_1:25423359-25423378 Msa0354350:intron 20.0%
!!! TGGGAAAAAATTTTTTTTGA+AGG - chr3_1:25423416-25423435 Msa0354350:intron 20.0%
!! AAGGAAAAAAAAATAAGCTA+GGG - chr3_1:25423435-25423454 Msa0354350:intron 20.0%
!! TTTAAGCCTTAAATATAACA+TGG - chr3_1:25423604-25423623 Msa0354350:intron 20.0%
!! ACAAAACCATGTTATATTTA+AGG + chr3_1:25423613-25423632 None:intergenic 20.0%
!!! AAATATAACATGGTTTTGTT+TGG - chr3_1:25423614-25423633 Msa0354350:intron 20.0%
!!! ACCACAATCTTTTTTATTTT+GGG + chr3_1:25423666-25423685 None:intergenic 20.0%
!! ATGTTAAATAAAGGACATTT+AGG + chr3_1:25423718-25423737 None:intergenic 20.0%
!! CAGTATATCATGTTAAATAA+AGG + chr3_1:25423727-25423746 None:intergenic 20.0%
!!! TTGATGTTACTATCATTTTA+TGG - chr3_1:25423782-25423801 Msa0354350:CDS 20.0%
!! AGAATTGGAACAAATTAAAA+GGG + chr3_1:25423971-25423990 None:intergenic 20.0%
!! AAGAATTGGAACAAATTAAA+AGG + chr3_1:25423972-25423991 None:intergenic 20.0%
!!! TGTCATTTTTTATATCTTTC+AGG - chr3_1:25424095-25424114 Msa0354350:intron 20.0%
!! TGTACACAATATTTATTTGA+GGG + chr3_1:25424339-25424358 None:intergenic 20.0%
!! ATGTACACAATATTTATTTG+AGG + chr3_1:25424340-25424359 None:intergenic 20.0%
!! TCTTAATGCATTAACAATTA+TGG + chr3_1:25424399-25424418 None:intergenic 20.0%
!! ATTATAAGAATCGTAATTGA+TGG - chr3_1:25424788-25424807 Msa0354350:CDS 20.0%
!! TCAAAAAAATTTAACCTAGT+TGG + chr3_1:25424957-25424976 None:intergenic 20.0%
!!! ACTAGGTTAAATTTTTTTGA+AGG - chr3_1:25424957-25424976 Msa0354350:intron 20.0%
!!! CTAGGTTAAATTTTTTTGAA+GGG - chr3_1:25424958-25424977 Msa0354350:intron 20.0%
!!! TTTTTTTGAAGGGAATTAAT+TGG - chr3_1:25424968-25424987 Msa0354350:intron 20.0%
!! ATAAGTAAGATTACAATGTA+AGG - chr3_1:25425027-25425046 Msa0354350:exon 20.0%
!!! TGTTGGTGTTTTATATTACA+CGG - chr3_1:25414902-25414921 Msa0354350:intron 25.0%
!! GAATAATGAGATTTTTGTTG+TGG - chr3_1:25415043-25415062 Msa0354350:intron 25.0%
! AAATTTGTCTTACAATAGCT+GGG + chr3_1:25415665-25415684 None:intergenic 25.0%
! TAAATTTGTCTTACAATAGC+TGG + chr3_1:25415666-25415685 None:intergenic 25.0%
! TATCCAAATCATCATTGAAA+TGG + chr3_1:25415756-25415775 None:intergenic 25.0%
!!! ATGGGGTTATTTTAAGAAAA+AGG - chr3_1:25415845-25415864 Msa0354350:intron 25.0%
!!! TTTTAAGAAAAAGGAAGAAG+TGG - chr3_1:25415854-25415873 Msa0354350:intron 25.0%
! TTTAAGAAAAAGGAAGAAGT+GGG - chr3_1:25415855-25415874 Msa0354350:intron 25.0%
!!! TTTTGTCTCTGTTCTAAAAT+TGG - chr3_1:25415950-25415969 Msa0354350:intron 25.0%
!! ATCTACATATGTAGATTTTG+GGG - chr3_1:25416017-25416036 Msa0354350:intron 25.0%
! CAAGATAACAAAATAGCAAA+AGG + chr3_1:25416339-25416358 None:intergenic 25.0%
!! TGGCTTTTAATAAAGATGTA+AGG + chr3_1:25416723-25416742 None:intergenic 25.0%
!!! AGTTCTGAATATTTCTCTAT+AGG + chr3_1:25416763-25416782 None:intergenic 25.0%
!! TTTTATTGAAGAAAGTGGTA+TGG + chr3_1:25416921-25416940 None:intergenic 25.0%
! AAATAATAGGCAGACTTATT+TGG - chr3_1:25416938-25416957 Msa0354350:intron 25.0%
!!! ATGGTCTAATATTTTAACTG+GGG + chr3_1:25417240-25417259 None:intergenic 25.0%
!! GACCATTAAGAAGTTTTTAT+AGG - chr3_1:25417254-25417273 Msa0354350:intron 25.0%
! TCCCTATAAAAACTTCTTAA+TGG + chr3_1:25417259-25417278 None:intergenic 25.0%
! ATCTTTCTTATATTTGTACG+TGG - chr3_1:25417539-25417558 Msa0354350:intron 25.0%
! TCTTTCTTATATTTGTACGT+GGG - chr3_1:25417540-25417559 Msa0354350:intron 25.0%
!!! TATAGTCCTCTAAAATGTTT+CGG + chr3_1:25417757-25417776 None:intergenic 25.0%
! GAGATAGAAGATATTAATTG+TGG + chr3_1:25417798-25417817 None:intergenic 25.0%
!! TTCTATCTCAATCCATTTTA+AGG - chr3_1:25417809-25417828 Msa0354350:intron 25.0%
! AATTTCCCCATTCATATATT+GGG - chr3_1:25417970-25417989 Msa0354350:intron 25.0%
! ATCATTTCTAAACTCTTGTA+TGG - chr3_1:25418048-25418067 Msa0354350:intron 25.0%
! ATTCAAGGAAAGATTTACTA+CGG + chr3_1:25418395-25418414 None:intergenic 25.0%
! TCTCATGAGATATTATTGTT+TGG - chr3_1:25418449-25418468 Msa0354350:CDS 25.0%
! CTCATGAGATATTATTGTTT+GGG - chr3_1:25418450-25418469 Msa0354350:CDS 25.0%
!! TATTTTGCATGGAATTATAC+AGG - chr3_1:25418590-25418609 Msa0354350:intron 25.0%
!!! CTTTTCCTTTATTTACTCTA+AGG - chr3_1:25418778-25418797 Msa0354350:intron 25.0%
!! CAATAATATTTAAGACTAGG+GGG + chr3_1:25419025-25419044 None:intergenic 25.0%
!! CCAATAATATTTAAGACTAG+GGG + chr3_1:25419026-25419045 None:intergenic 25.0%
!!! TTGTATTAAATTTAGCTCTC+TGG - chr3_1:25419081-25419100 Msa0354350:intron 25.0%
! TGTAAATTGACCAATTAAGT+TGG + chr3_1:25419254-25419273 None:intergenic 25.0%
! TTACAAGAATTATGTGACTA+TGG + chr3_1:25419546-25419565 None:intergenic 25.0%
! TCACATAATTCTTGTAATCA+AGG - chr3_1:25419549-25419568 Msa0354350:intron 25.0%
! CACATAATTCTTGTAATCAA+GGG - chr3_1:25419550-25419569 Msa0354350:intron 25.0%
! TTGTTACATGTTATTCATCT+AGG - chr3_1:25420037-25420056 Msa0354350:intron 25.0%
! ATGAAATTACCAATGATATG+AGG - chr3_1:25420195-25420214 Msa0354350:intron 25.0%
! GGGATTATGATATATTATTG+AGG - chr3_1:25420238-25420257 Msa0354350:CDS 25.0%
! CTAAAACACAAATAAGTTCA+TGG + chr3_1:25420277-25420296 None:intergenic 25.0%
! CTATTAATAACATCACTGAA+GGG + chr3_1:25420312-25420331 None:intergenic 25.0%
! ACTATTAATAACATCACTGA+AGG + chr3_1:25420313-25420332 None:intergenic 25.0%
! TGGATAAAATAATGAAACAG+AGG - chr3_1:25420389-25420408 Msa0354350:intron 25.0%
! ATAAAATAATGAAACAGAGG+TGG - chr3_1:25420392-25420411 Msa0354350:intron 25.0%
!! ATAGATGAAGAATTCCTTTT+CGG + chr3_1:25420503-25420522 None:intergenic 25.0%
!!! TAATTTTAGGTGAAGTTCTA+TGG - chr3_1:25420725-25420744 Msa0354350:intron 25.0%
!!! AATTTTAGGTGAAGTTCTAT+GGG - chr3_1:25420726-25420745 Msa0354350:intron 25.0%
! AAATCTCTTAAGGATGTATT+TGG - chr3_1:25420776-25420795 Msa0354350:intron 25.0%
!!! TTTTGTTTGTATACCCTTAT+TGG - chr3_1:25421518-25421537 Msa0354350:intron 25.0%
! TTTGTTTGTATACCCTTATT+GGG - chr3_1:25421519-25421538 Msa0354350:intron 25.0%
!! TTGTATATTTTGTTCTTGTC+CGG - chr3_1:25421760-25421779 Msa0354350:intron 25.0%
!!! AACCAGTTTTTTATATATGG+AGG - chr3_1:25421817-25421836 Msa0354350:intron 25.0%
! TTCCTCCATATATAAAAAAC+TGG + chr3_1:25421822-25421841 None:intergenic 25.0%
! GAATTATACAGCAAGAAATT+TGG - chr3_1:25422245-25422264 Msa0354350:intron 25.0%
!! ACAATATTATGTTTCTGTGT+TGG + chr3_1:25422428-25422447 None:intergenic 25.0%
! AAATCAACAGATAAGTGATT+TGG + chr3_1:25422480-25422499 None:intergenic 25.0%
! AGAACAGAAAATATTCAAAG+GGG + chr3_1:25422829-25422848 None:intergenic 25.0%
! TTAGTCCCTGAATTAAATAT+AGG - chr3_1:25423032-25423051 Msa0354350:intron 25.0%
! TTAAGGAAAAAAATAAGCCA+GGG + chr3_1:25423236-25423255 None:intergenic 25.0%
! TTTAAGGAAAAAAATAAGCC+AGG + chr3_1:25423237-25423256 None:intergenic 25.0%
! AAAAAAATTCGGGAAAAATC+TGG - chr3_1:25423396-25423415 Msa0354350:intron 25.0%
! AAAAAATTCGGGAAAAATCT+GGG - chr3_1:25423397-25423416 Msa0354350:intron 25.0%
! GAAGGAAAAAAAAATAAGCT+AGG - chr3_1:25423434-25423453 Msa0354350:intron 25.0%
! AGGAAAAAAAAATAAGCTAG+GGG - chr3_1:25423436-25423455 Msa0354350:intron 25.0%
! TTTAACTGATTAAACTTTGC+AGG - chr3_1:25423508-25423527 Msa0354350:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG - chr3_1:25423509-25423528 Msa0354350:intron 25.0%
!!! CCACAATCTTTTTTATTTTG+GGG + chr3_1:25423665-25423684 None:intergenic 25.0%
!!! GACCACAATCTTTTTTATTT+TGG + chr3_1:25423667-25423686 None:intergenic 25.0%
! AATAAAAAAGATTGTGGTCA+AGG - chr3_1:25423668-25423687 Msa0354350:intron 25.0%
! GGAATTTCAAACATAATAGA+TGG - chr3_1:25423894-25423913 Msa0354350:intron 25.0%
! TCCAATTCTTTAGTAGTATT+AGG - chr3_1:25423982-25424001 Msa0354350:intron 25.0%
! ATATCCATTAAATCTTTCAC+TGG + chr3_1:25424157-25424176 None:intergenic 25.0%
!! AGATTTAATGGATATGTACA+TGG - chr3_1:25424162-25424181 Msa0354350:intron 25.0%
!! TTTCAAGACTGTATTTCTAA+TGG - chr3_1:25424209-25424228 Msa0354350:intron 25.0%
! TAAAGAAAAACCATCTAAAG+TGG - chr3_1:25424274-25424293 Msa0354350:intron 25.0%
! CAATTATGGTAAACAAGTAT+TGG + chr3_1:25424385-25424404 None:intergenic 25.0%
! TATAAATATGTGAGGTCTTT+GGG + chr3_1:25424493-25424512 None:intergenic 25.0%
! ATATAAATATGTGAGGTCTT+TGG + chr3_1:25424494-25424513 None:intergenic 25.0%
! AACTCCATATAGTCATAATA+TGG + chr3_1:25424749-25424768 None:intergenic 25.0%
! TAGATTGATTGACAAAATAC+TGG - chr3_1:25424848-25424867 Msa0354350:CDS 25.0%
!! AAAATACTGGAAGTATATGT+TGG - chr3_1:25424861-25424880 Msa0354350:intron 25.0%
! CTTGTATTGCAAGTAAAATT+AGG + chr3_1:25425076-25425095 None:intergenic 25.0%
AATCAGAAAGAGAAAGAGAA+AGG + chr3_1:25414074-25414093 None:intergenic 30.0%
!! CTCTATTTTCTCTGATTTGA+AGG - chr3_1:25414095-25414114 Msa0354350:three_prime_UTR 30.0%
AACTGAGATGTTTCATTTCA+AGG - chr3_1:25414580-25414599 Msa0354350:intron 30.0%
! TTGTATTTGAGTCTTGTGTT+TGG - chr3_1:25414866-25414885 Msa0354350:intron 30.0%
! TGTATTTGAGTCTTGTGTTT+GGG - chr3_1:25414867-25414886 Msa0354350:intron 30.0%
ATAAAACACCAACACATACA+CGG + chr3_1:25414896-25414915 None:intergenic 30.0%
!! TAATGAGATTTTTGTTGTGG+TGG - chr3_1:25415046-25415065 Msa0354350:intron 30.0%
ATCATGCAGAATGAAATCAA+TGG + chr3_1:25415424-25415443 None:intergenic 30.0%
!! CATTCTGCATGATTTTGAAA+TGG - chr3_1:25415431-25415450 Msa0354350:intron 30.0%
CAAATCATCATTGAAATGGT+GGG + chr3_1:25415752-25415771 None:intergenic 30.0%
ATCAGTCAGGAATTGAAAAT+GGG - chr3_1:25415827-25415846 Msa0354350:intron 30.0%
! AAGAAGTGGGATAACTTTTT+AGG - chr3_1:25415868-25415887 Msa0354350:intron 30.0%
! AGAAGTGGGATAACTTTTTA+GGG - chr3_1:25415869-25415888 Msa0354350:intron 30.0%
TGAAAAACTTTAAGCAGAAG+TGG - chr3_1:25415987-25416006 Msa0354350:intron 30.0%
!!! GGAAAGAGAATTTTTAGTTG+CGG - chr3_1:25416038-25416057 Msa0354350:intron 30.0%
!! CGATTACTTGCTATACAAAA+TGG - chr3_1:25416074-25416093 Msa0354350:intron 30.0%
TACTGACATATAAACAGGTA+GGG + chr3_1:25416234-25416253 None:intergenic 30.0%
TGAGTTCGATCTAAATTTGA+TGG + chr3_1:25416427-25416446 None:intergenic 30.0%
CAAATTTAGATCGAACTCAT+AGG - chr3_1:25416428-25416447 Msa0354350:CDS 30.0%
!!! GTTGTTGACATTTTTTTCGA+TGG - chr3_1:25416523-25416542 Msa0354350:intron 30.0%
TTCACGAAAACAAATGTATG+GGG + chr3_1:25416605-25416624 None:intergenic 30.0%
CTTCACGAAAACAAATGTAT+GGG + chr3_1:25416606-25416625 None:intergenic 30.0%
ACTTCACGAAAACAAATGTA+TGG + chr3_1:25416607-25416626 None:intergenic 30.0%
! TTTTTCTCATACCTCTCAAA+GGG - chr3_1:25416840-25416859 Msa0354350:intron 30.0%
!!! TCTTTATTTTTCCCTTTGAG+AGG + chr3_1:25416854-25416873 None:intergenic 30.0%
!!! ATGATTTTTTCCCACATACA+TGG + chr3_1:25417010-25417029 None:intergenic 30.0%
! AAAAGGACAGACTTTTTGAA+CGG + chr3_1:25417469-25417488 None:intergenic 30.0%
AGAAAGATGTCATAGGAATT+AGG + chr3_1:25417527-25417546 None:intergenic 30.0%
CTTTCTTATATTTGTACGTG+GGG - chr3_1:25417541-25417560 Msa0354350:intron 30.0%
TTTCTTATATTTGTACGTGG+GGG - chr3_1:25417542-25417561 Msa0354350:intron 30.0%
!! ATTTTAGAGGACTATAGTAC+AGG - chr3_1:25417761-25417780 Msa0354350:intron 30.0%
ATGAGTAAAAGGCCTTAAAA+TGG + chr3_1:25417824-25417843 None:intergenic 30.0%
!! CCTACTGATTTATGAGTAAA+AGG + chr3_1:25417835-25417854 None:intergenic 30.0%
! CCTTTTACTCATAAATCAGT+AGG - chr3_1:25417832-25417851 Msa0354350:intron 30.0%
GTAACTGAAATTGGAACTTT+GGG + chr3_1:25417859-25417878 None:intergenic 30.0%
CAATTTCCCCATTCATATAT+TGG - chr3_1:25417969-25417988 Msa0354350:intron 30.0%
TATGACCCAATATATGAATG+GGG + chr3_1:25417978-25417997 None:intergenic 30.0%
CTATGACCCAATATATGAAT+GGG + chr3_1:25417979-25417998 None:intergenic 30.0%
ACTATGACCCAATATATGAA+TGG + chr3_1:25417980-25417999 None:intergenic 30.0%
AAATCTTTCCTTGAATTCAG+TGG - chr3_1:25418399-25418418 Msa0354350:intron 30.0%
! AATTCAGTGGTTGATTTCAA+GGG - chr3_1:25418412-25418431 Msa0354350:intron 30.0%
CAAAAACAATTGCAGTCAAA+TGG + chr3_1:25418494-25418513 None:intergenic 30.0%
GAATTGCAACATTCAAGAAA+TGG - chr3_1:25418621-25418640 Msa0354350:intron 30.0%
! ACATTCAAGAAATGGTGTTA+CGG - chr3_1:25418629-25418648 Msa0354350:intron 30.0%
AACAGACAGAATCACATAAT+TGG + chr3_1:25418685-25418704 None:intergenic 30.0%
TATGTATTGAGAAAACGTAC+TGG + chr3_1:25418756-25418775 None:intergenic 30.0%
CCACATCATACAATATTCTA+CGG + chr3_1:25418829-25418848 None:intergenic 30.0%
CGTAGAATATTGTATGATGT+GGG - chr3_1:25418827-25418846 Msa0354350:intron 30.0%
ATGATGTGGGATACATTTAT+TGG - chr3_1:25418840-25418859 Msa0354350:intron 30.0%
!! CCCCTAGTCTTAAATATTAT+TGG - chr3_1:25419023-25419042 Msa0354350:intron 30.0%
TTGGGAATGTAAAGAAATGT+AGG - chr3_1:25419046-25419065 Msa0354350:intron 30.0%
TGGGAATGTAAAGAAATGTA+GGG - chr3_1:25419047-25419066 Msa0354350:intron 30.0%
CAATCATGTCAACAATTGTA+AGG + chr3_1:25419316-25419335 None:intergenic 30.0%
TGTAGCTAATCTTGAATATC+TGG - chr3_1:25419434-25419453 Msa0354350:intron 30.0%
! TCGTTGATTGGTTGAAAAAA+AGG - chr3_1:25419666-25419685 Msa0354350:intron 30.0%
GAAACTTGGTAGAAGAAATT+AGG - chr3_1:25419772-25419791 Msa0354350:intron 30.0%
GTATTATTACTACTACGAAC+CGG - chr3_1:25419838-25419857 Msa0354350:intron 30.0%
AATAACATGTAACAACAGGT+TGG + chr3_1:25420032-25420051 None:intergenic 30.0%
GATGAATAACATGTAACAAC+AGG + chr3_1:25420036-25420055 None:intergenic 30.0%
AGTCATGGTACATAATTACA+TGG - chr3_1:25420063-25420082 Msa0354350:intron 30.0%
CTTTAGACCTTAGCTAATAA+GGG + chr3_1:25420089-25420108 None:intergenic 30.0%
! ATTTGATGACCTCATATCAT+TGG + chr3_1:25420207-25420226 None:intergenic 30.0%
CTGATTCAATAATTCCATGA+TGG - chr3_1:25420369-25420388 Msa0354350:intron 30.0%
CATTACATCACATTTCTCAA+TGG + chr3_1:25420428-25420447 None:intergenic 30.0%
CATTGAGAAATGTGATGTAA+TGG - chr3_1:25420426-25420445 Msa0354350:intron 30.0%
! TAGATGAAGAATTCCTTTTC+GGG + chr3_1:25420502-25420521 None:intergenic 30.0%
AAAAGAACTGACAACCATTA+AGG + chr3_1:25420578-25420597 None:intergenic 30.0%
!!! TGGTTGTCAGTTCTTTTTTT+AGG - chr3_1:25420581-25420600 Msa0354350:intron 30.0%
! ACAGAGAATAACTTAGCTTT+AGG - chr3_1:25420674-25420693 Msa0354350:intron 30.0%
!! GTGTAAATGAATGTTTTGGA+CGG + chr3_1:25420856-25420875 None:intergenic 30.0%
! GACAGTGTAAATGAATGTTT+TGG + chr3_1:25420860-25420879 None:intergenic 30.0%
! ACAGTGCAAATGAATGTTTT+GGG + chr3_1:25420914-25420933 None:intergenic 30.0%
TTAAGATTCGACGTCTTTAT+AGG + chr3_1:25421037-25421056 None:intergenic 30.0%
TATAAAGACGTCGAATCTTA+AGG - chr3_1:25421036-25421055 Msa0354350:intron 30.0%
GTATTTAAATCCATAGCATC+AGG + chr3_1:25421349-25421368 None:intergenic 30.0%
TTGTTTGTATACCCTTATTG+GGG - chr3_1:25421520-25421539 Msa0354350:intron 30.0%
TCTGTATACCATATGTGAAA+TGG - chr3_1:25421595-25421614 Msa0354350:intron 30.0%
AGAAACTTCCATTTCACATA+TGG + chr3_1:25421606-25421625 None:intergenic 30.0%
CAATTTATAATGAGCGCATT+AGG + chr3_1:25421643-25421662 None:intergenic 30.0%
TTCGGTTATATGAATTGTAC+CGG + chr3_1:25421782-25421801 None:intergenic 30.0%
!! GTTGTAATTTTGACCTTCTT+AGG - chr3_1:25421917-25421936 Msa0354350:intron 30.0%
! ATATCTTTGTTATCCTTCCT+AGG + chr3_1:25422014-25422033 None:intergenic 30.0%
! TATTTGCTAACAGTAGTAAG+AGG + chr3_1:25422048-25422067 None:intergenic 30.0%
AATTTACACAGAAAACTCCA+AGG + chr3_1:25422117-25422136 None:intergenic 30.0%
AGTCAATGCATTATTGCATA+GGG + chr3_1:25422308-25422327 None:intergenic 30.0%
AAGTCAATGCATTATTGCAT+AGG + chr3_1:25422309-25422328 None:intergenic 30.0%
!! ATGCAATAATGCATTGACTT+TGG - chr3_1:25422309-25422328 Msa0354350:intron 30.0%
ACTTTGGATCTAAACTTATG+TGG - chr3_1:25422325-25422344 Msa0354350:intron 30.0%
AACAAGTATGTCAATAGCAT+CGG + chr3_1:25422660-25422679 None:intergenic 30.0%
ACTTTACGATTGGAGATAAT+CGG + chr3_1:25422731-25422750 None:intergenic 30.0%
TAACTGATTAAACTTTGCAG+TGG + chr3_1:25423510-25423529 None:intergenic 30.0%
CAATTTACCAAAAATGGCAT+GGG - chr3_1:25423195-25423214 Msa0354350:intron 30.0%
TAAGGAAAAAAATAAGCCAG+GGG + chr3_1:25423235-25423254 None:intergenic 30.0%
TAACTGATTAAACTTTGCAG+GGG - chr3_1:25423510-25423529 Msa0354350:intron 30.0%
CCCCAAAATAAAAAAGATTG+TGG - chr3_1:25423662-25423681 Msa0354350:intron 30.0%
AAAAGACAGCATAGGAAATT+AGG + chr3_1:25423935-25423954 None:intergenic 30.0%
! TAATTTCCTATGCTGTCTTT+TGG - chr3_1:25423934-25423953 Msa0354350:intron 30.0%
GCCTAATACTACTAAAGAAT+TGG + chr3_1:25423986-25424005 None:intergenic 30.0%
! TTTAATGGATATGTACATGG+CGG - chr3_1:25424165-25424184 Msa0354350:intron 30.0%
! ACTGTATTTCTAATGGTTGA+TGG - chr3_1:25424216-25424235 Msa0354350:intron 30.0%
ATACCAAATTTCATAGCAAG+TGG - chr3_1:25424239-25424258 Msa0354350:intron 30.0%
ATAAGTTACCATCTATGCTT+TGG + chr3_1:25424463-25424482 None:intergenic 30.0%
ATAAATATGTGAGGTCTTTG+GGG + chr3_1:25424492-25424511 None:intergenic 30.0%
ACCTGTTAAGATTTCAAGAA+GGG + chr3_1:25424527-25424546 None:intergenic 30.0%
TACCTGTTAAGATTTCAAGA+AGG + chr3_1:25424528-25424547 None:intergenic 30.0%
AAGCCTTAGTAGAAGAAATA+AGG - chr3_1:25424560-25424579 Msa0354350:intron 30.0%
! CTTCCTTATTTCTTCTACTA+AGG + chr3_1:25424566-25424585 None:intergenic 30.0%
AATATCGCATTTGTGGATAT+TGG + chr3_1:25424683-25424702 None:intergenic 30.0%
ATAGTCATAATATGGCTTCT+GGG + chr3_1:25424741-25424760 None:intergenic 30.0%
TATAGTCATAATATGGCTTC+TGG + chr3_1:25424742-25424761 None:intergenic 30.0%
GAAGCCATATTATGACTATA+TGG - chr3_1:25424742-25424761 Msa0354350:CDS 30.0%
CGATTCTTATAATTTCCAAG+AGG + chr3_1:25424781-25424800 None:intergenic 30.0%
AATAATTGAGAAACGCGTTG+CGG + chr3_1:25414051-25414070 None:intergenic 35.0%
GCTTCAACATCTATGATCAA+AGG - chr3_1:25414345-25414364 Msa0354350:CDS 35.0%
TTTATATCGGAAAGTAGCTG+CGG - chr3_1:25414720-25414739 Msa0354350:intron 35.0%
! GGTGTTTGTATGATAGTGTT+TGG + chr3_1:25414803-25414822 None:intergenic 35.0%
! GTTGCTCTGTTTTGTGATTT+TGG - chr3_1:25415021-25415040 Msa0354350:intron 35.0%
!! TGCTGACTCATACAAAAAAG+CGG - chr3_1:25415107-25415126 Msa0354350:intron 35.0%
AGAATTTGCACTTACAACGA+CGG + chr3_1:25415213-25415232 None:intergenic 35.0%
!!! ATGATTTTGAAATGGCAGGT+AGG - chr3_1:25415439-25415458 Msa0354350:intron 35.0%
! TGCTGAAAAGTGATAATGTG+AGG + chr3_1:25415511-25415530 None:intergenic 35.0%
!! CACATTATCACTTTTCAGCA+TGG - chr3_1:25415511-25415530 Msa0354350:intron 35.0%
ACTCAGAATTAGCTAGCATA+TGG - chr3_1:25415575-25415594 Msa0354350:intron 35.0%
! GTTGACTCTCCTATTTCAAT+GGG + chr3_1:25415608-25415627 None:intergenic 35.0%
!! TGTTGACTCTCCTATTTCAA+TGG + chr3_1:25415609-25415628 None:intergenic 35.0%
CCAAATCATCATTGAAATGG+TGG + chr3_1:25415753-25415772 None:intergenic 35.0%
CCACCATTTCAATGATGATT+TGG - chr3_1:25415750-25415769 Msa0354350:intron 35.0%
CATCAGTCAGGAATTGAAAA+TGG - chr3_1:25415826-25415845 Msa0354350:intron 35.0%
TCAGTCAGGAATTGAAAATG+GGG - chr3_1:25415828-25415847 Msa0354350:intron 35.0%
ACACACAATCACAATCACAA+TGG + chr3_1:25415896-25415915 None:intergenic 35.0%
!!! TTTTTAGTTGCGGATGAAAG+AGG - chr3_1:25416048-25416067 Msa0354350:intron 35.0%
!! TTTTAGTTGCGGATGAAAGA+GGG - chr3_1:25416049-25416068 Msa0354350:intron 35.0%
TGAAGACTTTCTCTTCACAT+CGG - chr3_1:25416098-25416117 Msa0354350:intron 35.0%
ACTGACATATAAACAGGTAG+GGG + chr3_1:25416233-25416252 None:intergenic 35.0%
! GTACTGACATATAAACAGGT+AGG + chr3_1:25416235-25416254 None:intergenic 35.0%
TTTATATGTCAGTACCCTGT+TGG - chr3_1:25416240-25416259 Msa0354350:CDS 35.0%
TAGATCGAACTCATAGGATT+TGG - chr3_1:25416434-25416453 Msa0354350:CDS 35.0%
AAGCCATGACAAAAACTTTC+AGG - chr3_1:25416737-25416756 Msa0354350:intron 35.0%
! GTTTTTCTCATACCTCTCAA+AGG - chr3_1:25416839-25416858 Msa0354350:intron 35.0%
TTTCACATGCTTGCAGATTT+GGG + chr3_1:25417424-25417443 None:intergenic 35.0%
TTCTTATATTTGTACGTGGG+GGG - chr3_1:25417543-25417562 Msa0354350:intron 35.0%
TGCTTACTAGTATTCAAACG+TGG + chr3_1:25417670-25417689 None:intergenic 35.0%
ACGTTTGAATACTAGTAAGC+AGG - chr3_1:25417669-25417688 Msa0354350:intron 35.0%
GACTATCTGCTACATATTCA+TGG - chr3_1:25417711-25417730 Msa0354350:intron 35.0%
! CAAATGCCGAAACATTTTAG+AGG - chr3_1:25417748-25417767 Msa0354350:intron 35.0%
GGTAACTGAAATTGGAACTT+TGG + chr3_1:25417860-25417879 None:intergenic 35.0%
! AGTGTACTGGTAACTGAAAT+TGG + chr3_1:25417868-25417887 None:intergenic 35.0%
GACATATCACCATAGATCAT+TGG + chr3_1:25417909-25417928 None:intergenic 35.0%
AACTCCAATAAATCTGCAAC+AGG - chr3_1:25418341-25418360 Msa0354350:intron 35.0%
ACTCCAATAAATCTGCAACA+GGG - chr3_1:25418342-25418361 Msa0354350:intron 35.0%
GAAATCAACCACTGAATTCA+AGG + chr3_1:25418410-25418429 None:intergenic 35.0%
! GAATTCAGTGGTTGATTTCA+AGG - chr3_1:25418411-25418430 Msa0354350:intron 35.0%
!!! CAATTGTTTTTGTCCTGTCA+CGG - chr3_1:25418502-25418521 Msa0354350:CDS 35.0%
AGTAGAATCTTCTTCATCAC+TGG - chr3_1:25418542-25418561 Msa0354350:CDS 35.0%
TTCTTGAATGTTGCAATTCC+CGG + chr3_1:25418620-25418639 None:intergenic 35.0%
! TTGAGAAAACGTACTGGTAA+GGG + chr3_1:25418750-25418769 None:intergenic 35.0%
! ATTGAGAAAACGTACTGGTA+AGG + chr3_1:25418751-25418770 None:intergenic 35.0%
CCGTAGAATATTGTATGATG+TGG - chr3_1:25418826-25418845 Msa0354350:intron 35.0%
! AGATTCCATTTTCACCATGT+TGG + chr3_1:25418941-25418960 None:intergenic 35.0%
ATGGTGAAAATGGAATCTCT+AGG - chr3_1:25418943-25418962 Msa0354350:intron 35.0%
GGTTCTTTCTGTCGATAATA+CGG - chr3_1:25418969-25418988 Msa0354350:intron 35.0%
GTTCTTTCTGTCGATAATAC+GGG - chr3_1:25418970-25418989 Msa0354350:intron 35.0%
AAAGAAATGTAGGGATAGCT+AGG - chr3_1:25419056-25419075 Msa0354350:intron 35.0%
TGTCTTCATATGCATAAACC+AGG - chr3_1:25419134-25419153 Msa0354350:intron 35.0%
GTCTTCATATGCATAAACCA+GGG - chr3_1:25419135-25419154 Msa0354350:intron 35.0%
TCTTCATATGCATAAACCAG+GGG - chr3_1:25419136-25419155 Msa0354350:intron 35.0%
AGACATCAACAATGAGACTA+TGG + chr3_1:25419188-25419207 None:intergenic 35.0%
GAAGAGAACACCAACTTAAT+TGG - chr3_1:25419241-25419260 Msa0354350:intron 35.0%
CTTCTCAAAAATCACGAGTA+TGG + chr3_1:25419487-25419506 None:intergenic 35.0%
!! ATTTTTGAGAAGCCTGGATT+AGG - chr3_1:25419495-25419514 Msa0354350:intron 35.0%
GTGACTATGGTTTAAACTAG+TGG + chr3_1:25419533-25419552 None:intergenic 35.0%
AATCAACGATAACCATGCTT+TGG + chr3_1:25419655-25419674 None:intergenic 35.0%
AAAGCATGGTTATCGTTGAT+TGG - chr3_1:25419654-25419673 Msa0354350:intron 35.0%
AAATGAATCACCATGAGTTG+AGG - chr3_1:25419711-25419730 Msa0354350:intron 35.0%
AGAAGAACATGAACAAAGAG+TGG - chr3_1:25419742-25419761 Msa0354350:intron 35.0%
AGAAGAATTCGGTACGTATA+GGG + chr3_1:25419884-25419903 None:intergenic 35.0%
AACCATAGTCACATAATTCG+CGG + chr3_1:25419954-25419973 None:intergenic 35.0%
ATATGGCCTAAACCACTTAA+TGG - chr3_1:25419994-25420013 Msa0354350:intron 35.0%
TATGGCCTAAACCACTTAAT+GGG - chr3_1:25419995-25420014 Msa0354350:intron 35.0%
TATTCATCTAGGCTAAGTCA+TGG - chr3_1:25420048-25420067 Msa0354350:intron 35.0%
CCTTTAGACCTTAGCTAATA+AGG + chr3_1:25420090-25420109 None:intergenic 35.0%
CCTTATTAGCTAAGGTCTAA+AGG - chr3_1:25420087-25420106 Msa0354350:intron 35.0%
TATTTAAGGGGTCATGAAAC+AGG + chr3_1:25420114-25420133 None:intergenic 35.0%
!! TCTTTCTGAAGTTTCCGTAT+AGG - chr3_1:25420461-25420480 Msa0354350:intron 35.0%
! TGAAGTTTCCGTATAGGTTT+TGG - chr3_1:25420467-25420486 Msa0354350:intron 35.0%
!! TAAATGAATGTTTTGGACGG+AGG + chr3_1:25420853-25420872 None:intergenic 35.0%
! GACAGTGCAAATGAATGTTT+TGG + chr3_1:25420915-25420934 None:intergenic 35.0%
! ATCTTAAGGCATTAAGTGCA+TGG - chr3_1:25421050-25421069 Msa0354350:intron 35.0%
CTGTTTGAAGGCAAAGTTAT+TGG + chr3_1:25421147-25421166 None:intergenic 35.0%
AATGTTCAACTTGATCCGTA+AGG + chr3_1:25421233-25421252 None:intergenic 35.0%
AAACTATTGTCCTGATGCTA+TGG - chr3_1:25421336-25421355 Msa0354350:intron 35.0%
TTAGTGTTTAGCCCCAATAA+GGG + chr3_1:25421534-25421553 None:intergenic 35.0%
ATTATCATGTGTGCCTAAGA+AGG + chr3_1:25421933-25421952 None:intergenic 35.0%
GTTGCAATGTTGATATTCCT+TGG - chr3_1:25422097-25422116 Msa0354350:intron 35.0%
! TGTATTGGCAAGAATGGAAA+TGG + chr3_1:25422281-25422300 None:intergenic 35.0%
ATTGCATAGGGTTTGTGTAT+TGG + chr3_1:25422296-25422315 None:intergenic 35.0%
GTGTTGGATGAATAAGCAAA+AGG + chr3_1:25422412-25422431 None:intergenic 35.0%
! ATTTGTTTGTTACCAGCACA+TGG - chr3_1:25422496-25422515 Msa0354350:intron 35.0%
CAATGTCACGACTAAGATAT+TGG + chr3_1:25422540-25422559 None:intergenic 35.0%
! TTAGTCGTGACATTGACTAA+TGG - chr3_1:25422545-25422564 Msa0354350:intron 35.0%
! TAGTCGTGACATTGACTAAT+GGG - chr3_1:25422546-25422565 Msa0354350:intron 35.0%
ACAAGTATGTCAATAGCATC+GGG + chr3_1:25422659-25422678 None:intergenic 35.0%
AGTGCATGCAAAGACAAAAT+AGG - chr3_1:25422891-25422910 Msa0354350:CDS 35.0%
AGACAAAATAGGTAATGACC+TGG - chr3_1:25422902-25422921 Msa0354350:CDS 35.0%
CAGGGACTAAATAAATGCAT+GGG + chr3_1:25423022-25423041 None:intergenic 35.0%
TCAGGGACTAAATAAATGCA+TGG + chr3_1:25423023-25423042 None:intergenic 35.0%
! AAAAAGGATTAGCGATTGCA+GGG + chr3_1:25423538-25423557 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG + chr3_1:25423537-25423556 None:intergenic 35.0%
CTTTGCAGTGGCAAAAAAAA+AGG + chr3_1:25423123-25423142 None:intergenic 35.0%
!! TTTTTGGTAAATTGCTGACG+TGG + chr3_1:25423189-25423208 None:intergenic 35.0%
CGTCAGCAATTTACCAAAAA+TGG - chr3_1:25423189-25423208 Msa0354350:intron 35.0%
GCAATTTACCAAAAATGGCA+TGG - chr3_1:25423194-25423213 Msa0354350:intron 35.0%
!!! GTAAATTCCCATGCCATTTT+TGG + chr3_1:25423205-25423224 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG - chr3_1:25423537-25423556 Msa0354350:CDS 35.0%
! AAAAAGGATTAGCGATTGCA+GGG - chr3_1:25423538-25423557 Msa0354350:CDS 35.0%
TTCCTATTCATCAATGAGCT+GGG + chr3_1:25423811-25423830 None:intergenic 35.0%
TTTCCTATTCATCAATGAGC+TGG + chr3_1:25423812-25423831 None:intergenic 35.0%
! AATAGATGGTGTTTTGCTTG+TGG - chr3_1:25423908-25423927 Msa0354350:intron 35.0%
TGAAAACCAAAAGACAGCAT+AGG + chr3_1:25423943-25423962 None:intergenic 35.0%
CACACCAGTGAAAGATTTAA+TGG - chr3_1:25424150-25424169 Msa0354350:intron 35.0%
!! ACCATCTAAAGTGGCATTTT+AGG - chr3_1:25424283-25424302 Msa0354350:intron 35.0%
!! ACCTAAAATGCCACTTTAGA+TGG + chr3_1:25424287-25424306 None:intergenic 35.0%
ATTTACTGCCAAAGCATAGA+TGG - chr3_1:25424452-25424471 Msa0354350:intron 35.0%
TCCCTTCTTGAAATCTTAAC+AGG - chr3_1:25424523-25424542 Msa0354350:intron 35.0%
!! ATCTTAACAGGTATTGACAC+AGG - chr3_1:25424535-25424554 Msa0354350:intron 35.0%
TGAAAGCCAAACTCTATTGT+TGG - chr3_1:25424603-25424622 Msa0354350:intron 35.0%
AAGGTTCCAACAATAGAGTT+TGG + chr3_1:25424612-25424631 None:intergenic 35.0%
CCACTCAGATATAATTGTGT+AGG + chr3_1:25424706-25424725 None:intergenic 35.0%
CCTACACAATTATATCTGAG+TGG - chr3_1:25424703-25424722 Msa0354350:CDS 35.0%
GTATGAGAATCATCATTGCA+TGG - chr3_1:25424810-25424829 Msa0354350:CDS 35.0%
! TATATGTTGGTGAGGTTAAG+AGG - chr3_1:25424874-25424893 Msa0354350:intron 35.0%
TTAGTTCATTCCACTCCTAA+TGG - chr3_1:25424929-25424948 Msa0354350:intron 35.0%
CTCTTCTCTCACACATTTCA+TGG - chr3_1:25413933-25413952 Msa0354350:three_prime_UTR 40.0%
!! CTGATTTGAAGGTATCTCTG+CGG - chr3_1:25414106-25414125 Msa0354350:three_prime_UTR 40.0%
AGGATCCGTAAGGAATGTTT+CGG - chr3_1:25414197-25414216 Msa0354350:three_prime_UTR 40.0%
TCGTGAAGCTAATCCTGTTT+GGG - chr3_1:25414268-25414287 Msa0354350:CDS 40.0%
ACACTTTCCATCAGAATGGT+CGG + chr3_1:25414748-25414767 None:intergenic 40.0%
GGAAACACTTTCCATCAGAA+TGG + chr3_1:25414752-25414771 None:intergenic 40.0%
!! TGGAAAGTGTTTCCGACATT+AGG - chr3_1:25414758-25414777 Msa0354350:intron 40.0%
CACAAATACGTGCCTAATGT+CGG + chr3_1:25414773-25414792 None:intergenic 40.0%
AGTGGAAAGTTAATTCCGAG+TGG - chr3_1:25415078-25415097 Msa0354350:intron 40.0%
GATGATGAAGCCAATGATGA+TGG - chr3_1:25415171-25415190 Msa0354350:intron 40.0%
! TGCTTTGTTGCCATCATCAT+TGG + chr3_1:25415184-25415203 None:intergenic 40.0%
AGGCGTCCTAAAATAGTAAC+AGG + chr3_1:25415382-25415401 None:intergenic 40.0%
AAATCAATGGCGAGTTCTAC+TGG + chr3_1:25415411-25415430 None:intergenic 40.0%
!!! CTGCATGATTTTGAAATGGC+AGG - chr3_1:25415435-25415454 Msa0354350:intron 40.0%
GGGTTTGTAATACATCAGTC+AGG - chr3_1:25415814-25415833 Msa0354350:intron 40.0%
TGATCGTCTCAAACTCAACA+AGG - chr3_1:25416137-25416156 Msa0354350:intron 40.0%
!! CAGGGTACTGACATATAAAC+AGG + chr3_1:25416239-25416258 None:intergenic 40.0%
! AGGCCTGAAAGTTTTTGTCA+TGG + chr3_1:25416743-25416762 None:intergenic 40.0%
AGGCAGACTTATTTGGTTGA+AGG - chr3_1:25416945-25416964 Msa0354350:intron 40.0%
GGCAGACTTATTTGGTTGAA+GGG - chr3_1:25416946-25416965 Msa0354350:intron 40.0%
TTCACATGCTTGCAGATTTG+GGG + chr3_1:25417423-25417442 None:intergenic 40.0%
GTTTCACATGCTTGCAGATT+TGG + chr3_1:25417425-25417444 None:intergenic 40.0%
GATGTCATAGGAATTAGGTC+AGG + chr3_1:25417522-25417541 None:intergenic 40.0%
TCTTATATTTGTACGTGGGG+GGG - chr3_1:25417544-25417563 Msa0354350:intron 40.0%
CGTCAATTCAAACAGTGTAC+TGG + chr3_1:25417881-25417900 None:intergenic 40.0%
GACGCAATTCCAATGATCTA+TGG - chr3_1:25417897-25417916 Msa0354350:intron 40.0%
CAAGGAAAGATTTACTACGG+AGG + chr3_1:25418392-25418411 None:intergenic 40.0%
AGTAAAATGAACTCCGTGAC+AGG + chr3_1:25418518-25418537 None:intergenic 40.0%
! GTCACGGAGTTCATTTTACT+AGG - chr3_1:25418518-25418537 Msa0354350:CDS 40.0%
ATGGAATTATACAGGTCGTC+CGG - chr3_1:25418598-25418617 Msa0354350:intron 40.0%
!! AAATGGTGTTACGGTGATCA+CGG - chr3_1:25418638-25418657 Msa0354350:intron 40.0%
GTGATTCTGTCTGTTAGCAT+TGG - chr3_1:25418690-25418709 Msa0354350:intron 40.0%
GGGCTCCTTAGAGTAAATAA+AGG + chr3_1:25418786-25418805 None:intergenic 40.0%
TGGGATACATTTATTGGTCC+CGG - chr3_1:25418846-25418865 Msa0354350:intron 40.0%
TTGAGAACTTGTCACCAACA+TGG - chr3_1:25418924-25418943 Msa0354350:intron 40.0%
TGTCACCAACATGGTGAAAA+TGG - chr3_1:25418933-25418952 Msa0354350:intron 40.0%
GAAAATGGAATCTCTAGGTG+TGG - chr3_1:25418948-25418967 Msa0354350:intron 40.0%
AAAGGGAAATTCCTGCTGTA+GGG + chr3_1:25418997-25419016 None:intergenic 40.0%
AAAAGGGAAATTCCTGCTGT+AGG + chr3_1:25418998-25419017 None:intergenic 40.0%
TTGATGTCTATTAGCCCTCT+TGG - chr3_1:25419199-25419218 Msa0354350:intron 40.0%
ATCAAGGGAGAATTGCGAAT+TGG - chr3_1:25419565-25419584 Msa0354350:intron 40.0%
GAAGAATTCGGTACGTATAG+GGG + chr3_1:25419883-25419902 None:intergenic 40.0%
GAGAAGAATTCGGTACGTAT+AGG + chr3_1:25419885-25419904 None:intergenic 40.0%
TACGCGACAAGAGAAGAATT+CGG + chr3_1:25419895-25419914 None:intergenic 40.0%
AACCGCGAATTATGTGACTA+TGG - chr3_1:25419949-25419968 Msa0354350:intron 40.0%
ATGGCCTAAACCACTTAATG+GGG - chr3_1:25419996-25420015 Msa0354350:intron 40.0%
TACATGGCCCTTATTAGCTA+AGG - chr3_1:25420079-25420098 Msa0354350:intron 40.0%
CGGAAACTTCAGAAAGATCT+TGG + chr3_1:25420458-25420477 None:intergenic 40.0%
! GGAGAGGCTATTACACATTT+TGG - chr3_1:25420533-25420552 Msa0354350:intron 40.0%
!! AGGCTATTACACATTTTGGC+AGG - chr3_1:25420537-25420556 Msa0354350:intron 40.0%
!! TGCAAATGAATGTTTTGGGC+GGG + chr3_1:25420910-25420929 None:intergenic 40.0%
!! GTGCAAATGAATGTTTTGGG+CGG + chr3_1:25420911-25420930 None:intergenic 40.0%
ATTGAGTCATAATACGACCC+AGG - chr3_1:25420986-25421005 Msa0354350:intron 40.0%
TTGAGTCATAATACGACCCA+GGG - chr3_1:25420987-25421006 Msa0354350:intron 40.0%
! GTCAATTTTGCTTCTCGTCA+TGG - chr3_1:25421189-25421208 Msa0354350:intron 40.0%
TCAACTTGATCCGTAAGGTT+AGG + chr3_1:25421228-25421247 None:intergenic 40.0%
GCTTCATCTTAATCTTCTGC+TGG - chr3_1:25421409-25421428 Msa0354350:intron 40.0%
TCTGCTGGCAATAGAATTTG+CGG - chr3_1:25421424-25421443 Msa0354350:intron 40.0%
CTTAGTGTTTAGCCCCAATA+AGG + chr3_1:25421535-25421554 None:intergenic 40.0%
CTTATTGGGGCTAAACACTA+AGG - chr3_1:25421533-25421552 Msa0354350:intron 40.0%
!! TACAGCAAGAAATTTGGTGC+AGG - chr3_1:25422251-25422270 Msa0354350:intron 40.0%
! GGTTTGTGTATTGGCAAGAA+TGG + chr3_1:25422287-25422306 None:intergenic 40.0%
GATATGCATTATCCATGTGC+TGG + chr3_1:25422511-25422530 None:intergenic 40.0%
CACATGGATAATGCATATCC+CGG - chr3_1:25422512-25422531 Msa0354350:intron 40.0%
! AGTCGTGACATTGACTAATG+GGG - chr3_1:25422547-25422566 Msa0354350:intron 40.0%
TTCTCTCAAGGTCTCTTCAT+CGG + chr3_1:25422597-25422616 None:intergenic 40.0%
CAAGTATGTCAATAGCATCG+GGG + chr3_1:25422658-25422677 None:intergenic 40.0%
GGAATTTACGAAAATACCCC+TGG - chr3_1:25423216-25423235 Msa0354350:intron 40.0%
ATTCCCATGCAGTGATTAAC+TGG - chr3_1:25423470-25423489 Msa0354350:intron 40.0%
TTCCCATGCAGTGATTAACT+GGG - chr3_1:25423471-25423490 Msa0354350:intron 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG - chr3_1:25423522-25423541 Msa0354350:intron 40.0%
TTATTCGTCCCTGCAAATAG+GGG + chr3_1:25423580-25423599 None:intergenic 40.0%
GTTATTCGTCCCTGCAAATA+GGG + chr3_1:25423581-25423600 None:intergenic 40.0%
TGTTATTCGTCCCTGCAAAT+AGG + chr3_1:25423582-25423601 None:intergenic 40.0%
TCCTATTCATCAATGAGCTG+GGG + chr3_1:25423810-25423829 None:intergenic 40.0%
TATATCTTTCAGGCTCCTGT+TGG - chr3_1:25424105-25424124 Msa0354350:intron 40.0%
!! AGGCCACTTGCTATGAAATT+TGG + chr3_1:25424245-25424264 None:intergenic 40.0%
TGGATATTGGAGACTGTTTC+TGG + chr3_1:25424670-25424689 None:intergenic 40.0%
GTGTAGGAATATCGCATTTG+TGG + chr3_1:25424690-25424709 None:intergenic 40.0%
TTATATCTGAGTGGCAAGCT+TGG - chr3_1:25424712-25424731 Msa0354350:CDS 40.0%
! ACTGGAAGTATATGTTGGTG+AGG - chr3_1:25424866-25424885 Msa0354350:intron 40.0%
! TTAACCTAGTTGGCTCCATT+AGG + chr3_1:25424947-25424966 None:intergenic 40.0%
!! GCGAAAGTGTTAGCCGAAAA+CGG - chr3_1:25414128-25414147 Msa0354350:three_prime_UTR 45.0%
!! TATGTCTTCGACGCCGTTTT+CGG + chr3_1:25414144-25414163 None:intergenic 45.0%
CGTCGAAGACATAGTGATTC+TGG - chr3_1:25414151-25414170 Msa0354350:three_prime_UTR 45.0%
! CATAGTGATTCTGGAAGCGT+CGG - chr3_1:25414160-25414179 Msa0354350:three_prime_UTR 45.0%
ATCCGTAAGGAATGTTTCGG+TGG - chr3_1:25414200-25414219 Msa0354350:three_prime_UTR 45.0%
GTCGTGAAGCTAATCCTGTT+TGG - chr3_1:25414267-25414286 Msa0354350:CDS 45.0%
CTCAGTGCTGTATTCGCTTA+CGG - chr3_1:25414481-25414500 Msa0354350:intron 45.0%
GCTGTATTCGCTTACGGTTA+CGG - chr3_1:25414487-25414506 Msa0354350:intron 45.0%
TTAGCTGAAACGACGTCGTT+TGG - chr3_1:25414675-25414694 Msa0354350:intron 45.0%
TTGTGGTGGTTGCAATGTAG+TGG - chr3_1:25415060-25415079 Msa0354350:intron 45.0%
GGTCTCGTTCCCATTGAAAT+AGG - chr3_1:25415596-25415615 Msa0354350:intron 45.0%
GACTTTCTCTTCACATCGGA+AGG - chr3_1:25416102-25416121 Msa0354350:intron 45.0%
CACATCGGAAGGTAGAATCT+TGG - chr3_1:25416113-25416132 Msa0354350:intron 45.0%
AGCAAACAGACAAGCCAACA+GGG + chr3_1:25416257-25416276 None:intergenic 45.0%
AAGCAAACAGACAAGCCAAC+AGG + chr3_1:25416258-25416277 None:intergenic 45.0%
ATGATCAGCTGCCATGTATG+TGG - chr3_1:25416996-25417015 Msa0354350:intron 45.0%
TGATCAGCTGCCATGTATGT+GGG - chr3_1:25416997-25417016 Msa0354350:intron 45.0%
CTTATATTTGTACGTGGGGG+GGG - chr3_1:25417545-25417564 Msa0354350:intron 45.0%
TTATATTTGTACGTGGGGGG+GGG - chr3_1:25417546-25417565 Msa0354350:intron 45.0%
AAGCCATGATAGCAGCTCAT+GGG - chr3_1:25418140-25418159 Msa0354350:intron 45.0%
CGACCCTGTTGCAGATTTAT+TGG + chr3_1:25418348-25418367 None:intergenic 45.0%
GATTTACTACGGAGGAACCT+GGG + chr3_1:25418384-25418403 None:intergenic 45.0%
AGATTTACTACGGAGGAACC+TGG + chr3_1:25418385-25418404 None:intergenic 45.0%
TGGAATTATACAGGTCGTCC+GGG - chr3_1:25418599-25418618 Msa0354350:intron 45.0%
!! TACTGGTAAGGGTGGATTGA+AGG + chr3_1:25418739-25418758 None:intergenic 45.0%
! AGAAAACGTACTGGTAAGGG+TGG + chr3_1:25418747-25418766 None:intergenic 45.0%
!! CTAGCTTGCTTGATTACACG+GGG + chr3_1:25418806-25418825 None:intergenic 45.0%
!! GCTAGCTTGCTTGATTACAC+GGG + chr3_1:25418807-25418826 None:intergenic 45.0%
!! GGCTAGCTTGCTTGATTACA+CGG + chr3_1:25418808-25418827 None:intergenic 45.0%
! CAGCAGGAATTTCCCTTTTG+TGG - chr3_1:25418999-25419018 Msa0354350:intron 45.0%
CGCTAGAAAGTAGAGTTTCG+AGG - chr3_1:25419111-25419130 Msa0354350:intron 45.0%
CATATGCATAAACCAGGGGA+TGG - chr3_1:25419140-25419159 Msa0354350:intron 45.0%
ACTATGGATCACTGATACCG+TGG + chr3_1:25419172-25419191 None:intergenic 45.0%
GTCTATTAGCCCTCTTGGAT+AGG - chr3_1:25419204-25419223 Msa0354350:intron 45.0%
ACGTGTCAACCTATCCAAGA+GGG + chr3_1:25419216-25419235 None:intergenic 45.0%
!! CTCGTGATTTTTGAGAAGCC+TGG - chr3_1:25419489-25419508 Msa0354350:intron 45.0%
! CAGAGCATTAGTCCTAATCC+AGG + chr3_1:25419510-25419529 None:intergenic 45.0%
!! TGGTACGTGAGTACCGAATT+CGG - chr3_1:25419585-25419604 Msa0354350:intron 45.0%
! AGTACCGAATTCGGGTACTT+CGG - chr3_1:25419594-25419613 Msa0354350:intron 45.0%
TAACCATGCTTTGGTACGCT+TGG + chr3_1:25419646-25419665 None:intergenic 45.0%
AGAGTGGAGAGTGAGAAACT+TGG - chr3_1:25419758-25419777 Msa0354350:intron 45.0%
! CGTATAGGGGTATACAGCTT+CGG + chr3_1:25419870-25419889 None:intergenic 45.0%
ACATAATTCGCGGTTCGTTC+CGG + chr3_1:25419944-25419963 None:intergenic 45.0%
TGGCCTAAACCACTTAATGG+GGG - chr3_1:25419997-25420016 Msa0354350:intron 45.0%
TACCCCCCATTAAGTGGTTT+AGG + chr3_1:25420003-25420022 None:intergenic 45.0%
TAAACCACTTAATGGGGGGT+AGG - chr3_1:25420002-25420021 Msa0354350:intron 45.0%
CCACATGGCCAAAACCTATA+CGG + chr3_1:25420478-25420497 None:intergenic 45.0%
!!! AATTCCTTTTCGGGTCCACA+TGG + chr3_1:25420493-25420512 None:intergenic 45.0%
TCTTCATCTATGCTCACGAG+CGG - chr3_1:25420512-25420531 Msa0354350:intron 45.0%
!! CAAATGAATGTTTTGGGCGG+GGG + chr3_1:25420908-25420927 None:intergenic 45.0%
!! GCAAATGAATGTTTTGGGCG+GGG + chr3_1:25420909-25420928 None:intergenic 45.0%
TGAGTCATAATACGACCCAG+GGG - chr3_1:25420988-25421007 Msa0354350:intron 45.0%
GTTAAACGAGATGATCCCCT+GGG + chr3_1:25421006-25421025 None:intergenic 45.0%
AGTTAAACGAGATGATCCCC+TGG + chr3_1:25421007-25421026 None:intergenic 45.0%
TGAAACGTCTAACGCACACT+TGG - chr3_1:25421117-25421136 Msa0354350:intron 45.0%
! TTGCCGCTTACCTAACCTTA+CGG - chr3_1:25421215-25421234 Msa0354350:intron 45.0%
GATCCGTAAGGTTAGGTAAG+CGG + chr3_1:25421221-25421240 None:intergenic 45.0%
CAGCTTGCATAAATCAGGGA+GGG + chr3_1:25421863-25421882 None:intergenic 45.0%
AGGCCAGCTTGCATAAATCA+GGG + chr3_1:25421867-25421886 None:intergenic 45.0%
TAGGCCAGCTTGCATAAATC+AGG + chr3_1:25421868-25421887 None:intergenic 45.0%
GGTAATAGGTGTAGCTGATC+AGG + chr3_1:25421960-25421979 None:intergenic 45.0%
ACGACTAAGATATTGGAGCC+GGG + chr3_1:25422533-25422552 None:intergenic 45.0%
CACGACTAAGATATTGGAGC+CGG + chr3_1:25422534-25422553 None:intergenic 45.0%
TAATGGGGAATCAAAACGCG+TGG - chr3_1:25422562-25422581 Msa0354350:intron 45.0%
AGAGACCTTGAGAGAAGCTA+TGG - chr3_1:25422601-25422620 Msa0354350:intron 45.0%
! TCAATAGCATCGGGGATGTT+GGG + chr3_1:25422650-25422669 None:intergenic 45.0%
AAACCTGTTATTCCACCAGC+GGG + chr3_1:25422684-25422703 None:intergenic 45.0%
GAAACCTGTTATTCCACCAG+CGG + chr3_1:25422685-25422704 None:intergenic 45.0%
TGGAATAACAGGTTTCAGCG+CGG - chr3_1:25422689-25422708 Msa0354350:intron 45.0%
AATAGCAAGCTGTAAGCTCC+AGG + chr3_1:25422923-25422942 None:intergenic 45.0%
TGTGATTCGTCCCTGCAAAT+AGG - chr3_1:25423063-25423082 Msa0354350:intron 45.0%
GTGATTCGTCCCTGCAAATA+GGG - chr3_1:25423064-25423083 Msa0354350:intron 45.0%
TGATTCGTCCCTGCAAATAG+GGG - chr3_1:25423065-25423084 Msa0354350:intron 45.0%
TTAAGCGACCCCTATTTGCA+GGG + chr3_1:25423569-25423588 None:intergenic 45.0%
TTTAAGCGACCCCTATTTGC+AGG + chr3_1:25423568-25423587 None:intergenic 45.0%
GCAGTGATTAACTGGGTCAA+AGG + chr3_1:25423478-25423497 None:intergenic 45.0%
TGACGTGGCAGTGATTAACT+GGG + chr3_1:25423174-25423193 None:intergenic 45.0%
GACCCAGTTAATCACTGCAT+GGG + chr3_1:25423476-25423495 None:intergenic 45.0%
TGACCCAGTTAATCACTGCA+TGG + chr3_1:25423477-25423496 None:intergenic 45.0%
GCAGTGATTAACTGGGTCAA+AGG - chr3_1:25423478-25423497 Msa0354350:intron 45.0%
TTTAAGCGACCCCTATTTGC+AGG - chr3_1:25423568-25423587 Msa0354350:CDS 45.0%
TTAAGCGACCCCTATTTGCA+GGG - chr3_1:25423569-25423588 Msa0354350:CDS 45.0%
GTGAAGAAAATGCGACCAAC+AGG + chr3_1:25424123-25424142 None:intergenic 45.0%
! GTTGGTCGCATTTTCTTCAC+CGG - chr3_1:25424123-25424142 Msa0354350:intron 45.0%
!! GAACCTTTGCTAGCATTGAC+AGG - chr3_1:25424625-25424644 Msa0354350:CDS 45.0%
GATCCTGTCAATGCTAGCAA+AGG + chr3_1:25424631-25424650 None:intergenic 45.0%
GGAGTTGTAGAGAATCCTCT+TGG - chr3_1:25424763-25424782 Msa0354350:CDS 45.0%
CATCATTGCATGGTGAGTCA+TGG - chr3_1:25424820-25424839 Msa0354350:CDS 45.0%
TTGGTGAGGTTAAGAGGTGA+TGG - chr3_1:25424880-25424899 Msa0354350:intron 45.0%
TGGTGAGGTTAAGAGGTGAT+GGG - chr3_1:25424881-25424900 Msa0354350:intron 45.0%
!! AAAATTTATAATTATTTAAG+GGG + chr3_1:25420126-25420145 None:intergenic 5.0%
!!! AAAAATAAAAACTTAATTTT+AGG - chr3_1:25420712-25420731 Msa0354350:intron 5.0%
!! AGTATAATATTATTATAAAT+TGG - chr3_1:25422214-25422233 Msa0354350:intron 5.0%
!!! TAAAGTTTTTTATAATATTA+AGG - chr3_1:25422745-25422764 Msa0354350:intron 5.0%
!!! AATTTCAAAAAAAATTTTTA+AGG + chr3_1:25423253-25423272 None:intergenic 5.0%
!! TTAAAAATCATAAAAAATTT+CGG - chr3_1:25423313-25423332 Msa0354350:intron 5.0%
!! AAAAATTGTAAAAAAAAATT+CGG - chr3_1:25423385-25423404 Msa0354350:intron 5.0%
GCGAAAGTTACCGGAGATTC+CGG + chr3_1:25413995-25414014 None:intergenic 50.0%
TTGTGGAGGGGAGATGTGAA+TGG + chr3_1:25414025-25414044 None:intergenic 50.0%
AATTGAGAAACGCGTTGCGG+AGG + chr3_1:25414048-25414067 None:intergenic 50.0%
CGCCACCGAAACATTCCTTA+CGG + chr3_1:25414205-25414224 None:intergenic 50.0%
TCAACAGCGAGTTCCCAAAC+AGG + chr3_1:25414284-25414303 None:intergenic 50.0%
TTGGGTGTCCGTGTATGTGT+TGG - chr3_1:25414885-25414904 Msa0354350:intron 50.0%
TATATTTGTACGTGGGGGGG+GGG - chr3_1:25417547-25417566 Msa0354350:intron 50.0%
CAAGCCATGATAGCAGCTCA+TGG - chr3_1:25418139-25418158 Msa0354350:intron 50.0%
AGCCATGATAGCAGCTCATG+GGG - chr3_1:25418141-25418160 Msa0354350:intron 50.0%
AACCCCATGAGCTGCTATCA+TGG + chr3_1:25418146-25418165 None:intergenic 50.0%
GTTACGGTGATCACGGAAGA+TGG - chr3_1:25418645-25418664 Msa0354350:intron 50.0%
!! AGGGTGGATTGAAGGCAAGT+AGG + chr3_1:25418731-25418750 None:intergenic 50.0%
! ATATCAGCGTGAGAAGCACG+AGG + chr3_1:25418883-25418902 None:intergenic 50.0%
ATAATACGGGTCCCTACAGC+AGG - chr3_1:25418983-25419002 Msa0354350:intron 50.0%
AAGACTAGGGGGCCACAAAA+GGG + chr3_1:25419014-25419033 None:intergenic 50.0%
TAAGACTAGGGGGCCACAAA+AGG + chr3_1:25419015-25419034 None:intergenic 50.0%
CACGTGTCAACCTATCCAAG+AGG + chr3_1:25419217-25419236 None:intergenic 50.0%
! CTCTTGGATAGGTTGACACG+TGG - chr3_1:25419215-25419234 Msa0354350:intron 50.0%
!! GGTACGTGAGTACCGAATTC+GGG - chr3_1:25419586-25419605 Msa0354350:intron 50.0%
! TACGCCGAAGTACCCGAATT+CGG + chr3_1:25419601-25419620 None:intergenic 50.0%
ATTCGGGTACTTCGGCGTAT+TGG - chr3_1:25419602-25419621 Msa0354350:intron 50.0%
GAACCAAGCGTACCAAAGCA+TGG - chr3_1:25419640-25419659 Msa0354350:intron 50.0%
CTCACTCAGTCCTCAACTCA+TGG + chr3_1:25419724-25419743 None:intergenic 50.0%
TATACAGCTTCGGTACGCTC+CGG + chr3_1:25419860-25419879 None:intergenic 50.0%
GGCCTAAACCACTTAATGGG+GGG - chr3_1:25419998-25420017 Msa0354350:intron 50.0%
TTCTCCTACCCCCCATTAAG+TGG + chr3_1:25420009-25420028 None:intergenic 50.0%
!! CCGTATAGGTTTTGGCCATG+TGG - chr3_1:25420475-25420494 Msa0354350:intron 50.0%
!! ATGTTTTGGACGGAGGAGAG+AGG + chr3_1:25420846-25420865 None:intergenic 50.0%
CACTGTCGTCGATACTCACT+CGG - chr3_1:25420873-25420892 Msa0354350:intron 50.0%
CACTGTCGTCGATACTCACT+CGG - chr3_1:25420873-25420892 Msa0354350:intron 50.0%
CCAGCTTGCATAAATCAGGG+AGG + chr3_1:25421864-25421883 None:intergenic 50.0%
CCTCCCTGATTTATGCAAGC+TGG - chr3_1:25421861-25421880 Msa0354350:intron 50.0%
GACCTTGAGAGAAGCTATGG+CGG - chr3_1:25422604-25422623 Msa0354350:intron 50.0%
! GTCAATAGCATCGGGGATGT+TGG + chr3_1:25422651-25422670 None:intergenic 50.0%
TTGACATACTTGTTCCCCGC+TGG - chr3_1:25422666-25422685 Msa0354350:intron 50.0%
AACCTGTTATTCCACCAGCG+GGG + chr3_1:25422683-25422702 None:intergenic 50.0%
! AGGATTAGCGATTGCAGGGA+CGG + chr3_1:25423542-25423561 None:intergenic 50.0%
CTGACGTGGCAGTGATTAAC+TGG + chr3_1:25423175-25423194 None:intergenic 50.0%
GCCCCAGCTCATTGATGAAT+AGG - chr3_1:25423806-25423825 Msa0354350:CDS 50.0%
TCTTTCACTGGTGTGCTCTC+CGG + chr3_1:25424145-25424164 None:intergenic 50.0%
! CTAGTTGGCTCCATTAGGAG+TGG + chr3_1:25424942-25424961 None:intergenic 50.0%
CACTCCTAATGGAGCCAACT+AGG - chr3_1:25424940-25424959 Msa0354350:intron 50.0%
!! GATGACGGAGGAGCGATTAG+AGG + chr3_1:25413962-25413981 None:intergenic 55.0%
CGCTCCTCCGTCATCATCAT+CGG - chr3_1:25413967-25413986 Msa0354350:three_prime_UTR 55.0%
! GGTGTGGTGGCGAAAGTTAC+CGG + chr3_1:25414004-25414023 None:intergenic 55.0%
GGGAGATGTGAATGGTGTGG+TGG + chr3_1:25414017-25414036 None:intergenic 55.0%
GAGGGGAGATGTGAATGGTG+TGG + chr3_1:25414020-25414039 None:intergenic 55.0%
GGAATGTTTCGGTGGCGTGT+CGG - chr3_1:25414208-25414227 Msa0354350:three_prime_UTR 55.0%
TCCAACACCAGCGATCCAAC+CGG + chr3_1:25414246-25414265 None:intergenic 55.0%
GAGTCAGCAGCGATTCCACT+CGG + chr3_1:25415096-25415115 None:intergenic 55.0%
GCGAGTTCTACTGGCGTCTT+AGG + chr3_1:25415402-25415421 None:intergenic 55.0%
ATATTTGTACGTGGGGGGGG+GGG - chr3_1:25417548-25417567 Msa0354350:intron 55.0%
GTCGTACTCGAAGTCTACCC+AGG - chr3_1:25418364-25418383 Msa0354350:intron 55.0%
! CTTTGGTACGCTTGGTTCGC+TGG + chr3_1:25419638-25419657 None:intergenic 55.0%
TTGGCCATGTGGACCCGAAA+AGG - chr3_1:25420486-25420505 Msa0354350:intron 55.0%
ATCTATGCTCACGAGCGGAG+AGG - chr3_1:25420517-25420536 Msa0354350:intron 55.0%
CACCGCCATAGCTTCTCTCA+AGG + chr3_1:25422609-25422628 None:intergenic 55.0%
AGAAGCTATGGCGGTGCTCA+GGG - chr3_1:25422613-25422632 Msa0354350:intron 55.0%
GCGGTGCTCAGGGATATGTT+TGG - chr3_1:25422623-25422642 Msa0354350:intron 55.0%
ACATACTTGTTCCCCGCTGG+TGG - chr3_1:25422669-25422688 Msa0354350:intron 55.0%
TTCCCCGCTGGTGGAATAAC+AGG - chr3_1:25422678-25422697 Msa0354350:intron 55.0%
!! GTACATGGCGGATATCTCGC+AGG - chr3_1:25424177-25424196 Msa0354350:intron 55.0%
TCCGTCATCATCATCGGCGC+CGG - chr3_1:25413973-25413992 Msa0354350:three_prime_UTR 60.0%
!! TCCGGCGCCGATGATGATGA+CGG + chr3_1:25413977-25413996 None:intergenic 60.0%
! ATCATCGGCGCCGGAATCTC+CGG - chr3_1:25413982-25414001 Msa0354350:three_prime_UTR 60.0%
GAAACGCGTTGCGGAGGTTG+TGG + chr3_1:25414042-25414061 None:intergenic 60.0%
!! CTGGAAGCGTCGGACCGAAT+CGG - chr3_1:25414170-25414189 Msa0354350:three_prime_UTR 60.0%
! TACGGATCCTGCCGCCGATT+CGG + chr3_1:25414187-25414206 None:intergenic 60.0%
AATCGGCGGCAGGATCCGTA+AGG - chr3_1:25414187-25414206 Msa0354350:three_prime_UTR 60.0%
ATGTTTCGGTGGCGTGTCGG+TGG - chr3_1:25414211-25414230 Msa0354350:exon 60.0%
! GGTTGGATCGCTGGTGTTGG+AGG - chr3_1:25414245-25414264 Msa0354350:CDS 60.0%
!! TGCGGCACCGACCATTCTGA+TGG - chr3_1:25414738-25414757 Msa0354350:intron 60.0%
TATTTGTACGTGGGGGGGGG+GGG - chr3_1:25417549-25417568 Msa0354350:intron 60.0%
! TCAGCGTGAGAAGCACGAGG+TGG + chr3_1:25418880-25418899 None:intergenic 60.0%
CCAGGGGATGGCATGATCCA+CGG - chr3_1:25419152-25419171 Msa0354350:intron 60.0%
TTCGTTCCGGTACGCGGTAC+GGG + chr3_1:25419931-25419950 None:intergenic 60.0%
GTTCGTTCCGGTACGCGGTA+CGG + chr3_1:25419932-25419951 None:intergenic 60.0%
GAGAAGCTATGGCGGTGCTC+AGG - chr3_1:25422612-25422631 Msa0354350:intron 60.0%
!! GGCGCCGATGATGATGACGG+AGG + chr3_1:25413974-25413993 None:intergenic 65.0%
GCGTTGCGGAGGTTGTGGAG+GGG + chr3_1:25414037-25414056 None:intergenic 65.0%
CGCGTTGCGGAGGTTGTGGA+GGG + chr3_1:25414038-25414057 None:intergenic 65.0%
ACGCGTTGCGGAGGTTGTGG+AGG + chr3_1:25414039-25414058 None:intergenic 65.0%
!! GAAGCGTCGGACCGAATCGG+CGG - chr3_1:25414173-25414192 Msa0354350:three_prime_UTR 65.0%
! GGTGGCGTGTCGGTGGAACT+CGG - chr3_1:25414218-25414237 Msa0354350:exon 65.0%
!! GTGTCGGTGGAACTCGGTGC+CGG - chr3_1:25414224-25414243 Msa0354350:exon 65.0%
GCCGGTTGGATCGCTGGTGT+TGG - chr3_1:25414242-25414261 Msa0354350:CDS 65.0%
ATTTGTACGTGGGGGGGGGG+GGG - chr3_1:25417550-25417569 Msa0354350:intron 65.0%
CCGTGGATCATGCCATCCCC+TGG + chr3_1:25419155-25419174 None:intergenic 65.0%
TCCGGTACGCGGTACGGGTA+CGG + chr3_1:25419926-25419945 None:intergenic 65.0%
TCGCGGTTCGTTCCGGTACG+CGG + chr3_1:25419937-25419956 None:intergenic 65.0%
!! CGGTGGAACTCGGTGCCGGT+TGG - chr3_1:25414228-25414247 Msa0354350:exon 70.0%
!! CTCGGTGCCGGTTGGATCGC+TGG - chr3_1:25414236-25414255 Msa0354350:CDS 70.0%
TTTGTACGTGGGGGGGGGGG+GGG - chr3_1:25417551-25417570 Msa0354350:intron 70.0%
GCGGTACGGGTACGGGTTCG+CGG + chr3_1:25419918-25419937 None:intergenic 70.0%
CCGGTACGCGGTACGGGTAC+GGG + chr3_1:25419925-25419944 None:intergenic 70.0%
CCCGTACCCGTACCGCGTAC+CGG - chr3_1:25419922-25419941 Msa0354350:intron 70.0%
CGTCGGACCGAATCGGCGGC+AGG - chr3_1:25414177-25414196 Msa0354350:three_prime_UTR 75.0%
TTGTACGTGGGGGGGGGGGG+GGG - chr3_1:25417552-25417571 Msa0354350:intron 75.0%
! TGTACGTGGGGGGGGGGGGG+GGG - chr3_1:25417553-25417572 Msa0354350:intron 80.0%
! GTACGTGGGGGGGGGGGGGG+GGG - chr3_1:25417554-25417573 Msa0354350:intron 85.0%
! TACGTGGGGGGGGGGGGGGG+GGG - chr3_1:25417555-25417574 Msa0354350:intron 85.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 25413875 25425110 25413875 ID=Msa0354350;Name=Msa0354350
chr3_1 mRNA 25413875 25425110 25413875 ID=Msa0354350-mRNA-1;Parent=Msa0354350;Name=Msa0354350-mRNA-1;_AED=0.03;_eAED=0.03;_QI=77|1|1|1|1|1|10|354|499
chr3_1 exon 25413875 25414440 25413875 ID=Msa0354350-mRNA-1:exon:5621;Parent=Msa0354350-mRNA-1
chr3_1 exon 25414787 25414868 25414787 ID=Msa0354350-mRNA-1:exon:5620;Parent=Msa0354350-mRNA-1
chr3_1 exon 25416219 25416473 25416219 ID=Msa0354350-mRNA-1:exon:5619;Parent=Msa0354350-mRNA-1
chr3_1 exon 25418427 25418576 25418427 ID=Msa0354350-mRNA-1:exon:5618;Parent=Msa0354350-mRNA-1
chr3_1 exon 25420230 25420373 25420230 ID=Msa0354350-mRNA-1:exon:5617;Parent=Msa0354350-mRNA-1
chr3_1 exon 25422827 25422981 25422827 ID=Msa0354350-mRNA-1:exon:5616;Parent=Msa0354350-mRNA-1
chr3_1 exon 25423529 25423590 25423529 ID=Msa0354350-mRNA-1:exon:5615;Parent=Msa0354350-mRNA-1
chr3_1 exon 25423768 25423905 25423768 ID=Msa0354350-mRNA-1:exon:5614;Parent=Msa0354350-mRNA-1
chr3_1 exon 25424619 25424868 25424619 ID=Msa0354350-mRNA-1:exon:5613;Parent=Msa0354350-mRNA-1
chr3_1 exon 25424982 25425110 25424982 ID=Msa0354350-mRNA-1:exon:5612;Parent=Msa0354350-mRNA-1
chr3_1 five_prime_UTR 25425034 25425110 25425034 ID=Msa0354350-mRNA-1:five_prime_utr;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25424982 25425033 25424982 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25424619 25424868 25424619 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25423768 25423905 25423768 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25423529 25423590 25423529 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25422827 25422981 25422827 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25420230 25420373 25420230 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25418427 25418576 25418427 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25416219 25416473 25416219 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25414787 25414868 25414787 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 CDS 25414229 25414440 25414229 ID=Msa0354350-mRNA-1:cds;Parent=Msa0354350-mRNA-1
chr3_1 three_prime_UTR 25413875 25414228 25413875 ID=Msa0354350-mRNA-1:three_prime_utr;Parent=Msa0354350-mRNA-1
Gene Sequence

>Msa0354350

ATGGATTCCTCTAATCGCTCCTCCGTCATCATCATCGGCGCCGGAATCTCCGGTATCTCTGCGGCGAAAGTGTTAGCCGAAAACGGCGTCGAAGACATAGTGATTCTGGAAGCGTCGGACCGAATCGGCGGCAGGATCCGTAAGGAATGTTTCGGTGGCGTGTCGGTGGAACTCGGTGCCGGTTGGATCGCTGGTGTTGGAGGTCGTGAAGCTAATCCTGTTTGGGAACTCGCTGTTGAACATAATCTCAAAACGTGTTTTTCTGATTATAGCAATGCTCGCTTCAACATCTATGATCAAAGTGGAAAGTTAATTCCGAGTGGAATCGCTGCTGACTCATACAAAAAAGCGGTTGACTCAGCGATTCAGAAATTGAGAAATGAAGAAGATGAAGATGATGAAGCCAATGATGATGGCAACAAAGCAACGAAACCGTCGTTGACGCCTAAGACGCCAGTAGAACTCGCCATTGATTTCATTCTGCATGATTTTGAAATGGCAGAAGTGGAACCAATATCTACATATGTAGATTTTGGGGAAAGAGAATTTTTAGTTGCGGATGAAAGAGGGTACGATTACTTGCTATACAAAATGGCTGAAGACTTTCTCTTCACATCGGAAGGTAGAATCTTGGATGATCGTCTCAAACTCAACAAGGTCGTCCGGGAATTGCAACATTCAAGAAATGGTGTTACGGTGATCACGGAAGATGGTTGTGTTTACGAAGCCAATTATGTGATTCTGTCTGTTAGCATTGGTGTTCTTCAAAGTGACCTACTTGCCTTCAATCCACCCTTACCAAGGTGGAAATTTGAAGCCATTGAGAAATGTGATGTAATGGTGTACACCAAGATCTTTCTGAAGTTTCCGTATAGGTTTTGGCCATGTGGACCCGAAAAGGAATTCTTCATCTATGCTCACGAGCGGAGAGGCTATTACACATTTTGGCAGCACATGGATAATGCATATCCCGGCTCCAATATCTTAGTCGTGACATTGACTAATGGGGAATCAAAACGCGTGGAAGCTCAATCCGATGAAGAGACCTTGAGAGAAGCTATGGCGGTGCTCAGGGATATGTTTGGACCCAACATCCCCGATGCTATTGACATACTTGTTCCCCGCTGGTGGAATAACAGGTTTCAGCGCGGCAGCTACAGCAACTTTCCGATTATCTCCAATCGTAAAGTTTTTTATAATATTAAGGCTCCTGTTGGTCGCATTTTCTTCACCGGAGAGCACACCAGTGAAAGATTTAATGGATATGTACATGGCGGATATCTCGCAGGTATTGACACAGGCAAAGCCTTAGTAGAAGAAATAAGGAAGAAAAATGAAAGAGAAAGTGAAAGCCAAACTCTATTGTTGGAACCTTTGCTAGCATTGACAGGATCATTAACTATGTCAAAGCCAGAAACAGTCTCCAATATCCACAAATGCGATATTCCTACACAATTATATCTGAGTGGCAAGCTTGGAATCCCAGAAGCCATATTATGA
Protein sequence

>Msa0354350

MDSSNRSSVIIIGAGISGISAAKVLAENGVEDIVILEASDRIGGRIRKECFGGVSVELGAGWIAGVGGREANPVWELAVEHNLKTCFSDYSNARFNIYDQSGKLIPSGIAADSYKKAVDSAIQKLRNEEDEDDEANDDGNKATKPSLTPKTPVELAIDFILHDFEMAEVEPISTYVDFGEREFLVADERGYDYLLYKMAEDFLFTSEGRILDDRLKLNKVVRELQHSRNGVTVITEDGCVYEANYVILSVSIGVLQSDLLAFNPPLPRWKFEAIEKCDVMVYTKIFLKFPYRFWPCGPEKEFFIYAHERRGYYTFWQHMDNAYPGSNILVVTLTNGESKRVEAQSDEETLREAMAVLRDMFGPNIPDAIDILVPRWWNNRFQRGSYSNFPIISNRKVFYNIKAPVGRIFFTGEHTSERFNGYVHGGYLAGIDTGKALVEEIRKKNERESESQTLLLEPLLALTGSLTMSKPETVSNIHKCDIPTQLYLSGKLGIPEAIL*