AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0614290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614290 MtrunA17_Chr4g0050291 96.702 667 18 1 12 678 3 665 0.0 1333
Msa0614290 MtrunA17_Chr4g0050251 74.886 657 152 6 25 678 41 687 0.0 1002
Msa0614290 MtrunA17_Chr4g0050261 71.367 695 145 7 25 674 41 726 0.0 991
Msa0614290 MtrunA17_Chr4g0026731 70.401 598 152 4 92 668 12 605 0.0 869
Msa0614290 MtrunA17_Chr4g0050221 60.224 626 232 9 30 653 6 616 0.0 757
Msa0614290 MtrunA17_Chr4g0050201 58.664 554 210 6 99 648 2 540 0.0 673
Msa0614290 MtrunA17_Chr6g0477811 52.550 647 281 6 37 672 47 678 0.0 658
Msa0614290 MtrunA17_Chr4g0039261 45.763 649 322 8 26 661 20 651 0.0 578
Msa0614290 MtrunA17_Chr4g0039251 45.534 683 338 10 6 669 35 702 0.0 563
Msa0614290 MtrunA17_Chr4g0039231 42.155 631 290 8 101 669 2 619 1.76e-161 479
Msa0614290 MtrunA17_Chr2g0327241 37.439 617 356 9 34 640 104 700 2.61e-129 399
Msa0614290 MtrunA17_Chr1g0176451 32.914 556 326 15 49 582 17 547 1.28e-77 259
Msa0614290 MtrunA17_Chr1g0213091 29.141 652 388 14 54 647 117 752 3.46e-76 259
Msa0614290 MtrunA17_Chr7g0263351 27.500 640 409 10 52 647 120 748 1.77e-75 257
Msa0614290 MtrunA17_Chr8g0384391 29.264 598 393 11 57 641 54 634 2.34e-75 254
Msa0614290 MtrunA17_Chr1g0208391 29.970 664 410 16 30 676 66 691 8.51e-75 255
Msa0614290 MtrunA17_Chr2g0316301 30.221 589 376 12 56 640 70 627 1.76e-74 252
Msa0614290 MtrunA17_Chr7g0267971 31.754 570 349 13 35 580 136 689 1.16e-73 252
Msa0614290 MtrunA17_Chr3g0130331 29.766 598 388 14 57 641 56 634 4.53e-72 246
Msa0614290 MtrunA17_Chr4g0065231 28.378 592 384 12 58 640 74 634 4.97e-72 245
Msa0614290 MtrunA17_Chr1g0176441 30.541 573 356 14 35 582 147 702 3.37e-70 243
Msa0614290 MtrunA17_Chr1g0200651 33.333 492 287 17 20 491 51 521 1.94e-63 223
Msa0614290 MtrunA17_Chr1g0202431 27.825 593 391 13 59 647 50 609 1.02e-61 217
Msa0614290 MtrunA17_Chr1g0198931 29.744 585 355 20 33 589 72 628 3.78e-61 216
Msa0614290 MtrunA17_Chr5g0408061 28.846 624 394 16 35 641 45 635 4.69e-61 215
Msa0614290 MtrunA17_Chr8g0359931 30.478 502 317 9 55 546 62 541 7.62e-58 206
Msa0614290 MtrunA17_Chr5g0446901 30.651 522 328 13 44 546 94 600 6.13e-57 203
Msa0614290 MtrunA17_Chr2g0318061 39.100 289 164 5 55 340 27 306 1.13e-55 194
Msa0614290 MtrunA17_Chr3g0102731 32.473 465 285 11 59 510 98 546 1.75e-54 196
Msa0614290 MtrunA17_Chr8g0393191 41.502 253 141 4 54 304 64 311 4.72e-52 193
Msa0614290 MtrunA17_Chr8g0393191 23.513 353 235 11 310 645 479 813 3.58e-18 89.0
Msa0614290 MtrunA17_Chr2g0331081 28.972 535 343 14 51 569 883 1396 5.42e-51 191
Msa0614290 MtrunA17_Chr2g0331081 24.724 635 397 15 58 640 178 783 8.09e-43 167
Msa0614290 MtrunA17_Chr7g0262251 25.616 609 383 15 15 579 771 1353 7.40e-50 188
Msa0614290 MtrunA17_Chr7g0262251 25.287 609 420 12 52 640 168 761 2.69e-40 159
Msa0614290 MtrunA17_Chr2g0332241 26.415 583 372 15 10 559 791 1349 1.54e-49 187
Msa0614290 MtrunA17_Chr2g0332241 23.688 629 411 16 58 642 166 769 2.18e-38 153
Msa0614290 MtrunA17_Chr3g0104621 25.293 597 389 13 2 567 695 1265 2.79e-49 186
Msa0614290 MtrunA17_Chr3g0104621 26.911 628 389 14 55 638 52 653 1.75e-44 172
Msa0614290 MtrunA17_Chr7g0261971 26.364 660 419 17 14 642 819 1442 4.29e-49 186
Msa0614290 MtrunA17_Chr7g0261971 25.000 632 411 16 58 646 157 768 3.55e-40 159
Msa0614290 MtrunA17_Chr2g0332221 27.360 519 334 13 59 559 855 1348 7.78e-49 185
Msa0614290 MtrunA17_Chr2g0332221 24.165 629 408 16 58 642 166 769 6.38e-40 158
Msa0614290 MtrunA17_Chr4g0003981 25.785 605 389 16 59 642 866 1431 8.96e-49 185
Msa0614290 MtrunA17_Chr4g0003981 23.840 625 415 14 58 640 172 777 2.65e-35 144
Msa0614290 MtrunA17_Chr7g0262241 26.252 579 366 14 14 559 823 1373 1.59e-48 184
Msa0614290 MtrunA17_Chr7g0262241 24.723 631 414 15 58 646 161 772 8.37e-40 157
Msa0614290 MtrunA17_Chr0c20g0493841 26.917 639 397 14 46 638 154 768 4.38e-48 183
Msa0614290 MtrunA17_Chr0c20g0493841 26.190 546 357 12 53 579 852 1370 2.44e-43 168
Msa0614290 MtrunA17_Chr7g0265981 26.471 612 397 15 49 641 873 1450 1.28e-47 181
Msa0614290 MtrunA17_Chr7g0265981 24.559 623 414 11 59 640 184 791 3.13e-42 165
Msa0614290 MtrunA17_Chr8g0340651 28.386 539 329 15 51 567 897 1400 1.36e-47 181
Msa0614290 MtrunA17_Chr8g0340651 25.714 665 411 18 58 674 177 806 7.12e-44 170
Msa0614290 MtrunA17_Chr7g0265991 26.923 624 390 18 49 641 49 637 2.17e-47 177
Msa0614290 MtrunA17_Chr2g0332211 26.250 560 358 15 30 559 898 1432 3.00e-47 180
Msa0614290 MtrunA17_Chr2g0332211 24.089 631 406 17 58 642 247 850 2.66e-38 153
Msa0614290 MtrunA17_Chr5g0411621 35.691 311 165 8 12 314 25 308 3.27e-47 178
Msa0614290 MtrunA17_Chr5g0411621 25.623 281 197 5 365 645 455 723 9.31e-24 106
Msa0614290 MtrunA17_Chr1g0171351 27.184 515 340 11 59 559 894 1387 1.40e-46 178
Msa0614290 MtrunA17_Chr1g0171351 24.960 629 400 19 59 638 176 781 4.32e-37 149
Msa0614290 MtrunA17_Chr7g0262231 26.046 526 348 10 51 559 875 1376 1.88e-45 175
Msa0614290 MtrunA17_Chr7g0262231 24.100 639 408 14 58 646 161 772 1.16e-40 160
Msa0614290 MtrunA17_Chr7g0262261 26.365 641 428 16 28 642 760 1382 7.08e-45 173
Msa0614290 MtrunA17_Chr7g0262261 24.920 626 415 14 52 638 126 735 7.49e-42 164
Msa0614290 MtrunA17_Chr3g0138261 25.470 585 390 11 20 579 819 1382 8.00e-45 173
Msa0614290 MtrunA17_Chr3g0138261 25.280 625 390 17 58 632 165 762 3.54e-39 155
Msa0614290 MtrunA17_Chr4g0062871 26.778 661 408 18 58 667 149 784 9.51e-45 172
Msa0614290 MtrunA17_Chr4g0062871 26.054 522 353 11 51 559 836 1337 1.03e-39 157
Msa0614290 MtrunA17_Chr7g0261951 25.339 663 422 17 14 642 823 1446 1.04e-44 172
Msa0614290 MtrunA17_Chr7g0261951 24.842 632 412 15 58 646 161 772 3.67e-41 162
Msa0614290 MtrunA17_Chr7g0262221 25.112 669 422 19 18 646 803 1432 2.67e-44 171
Msa0614290 MtrunA17_Chr7g0262221 25.000 632 407 15 58 638 162 777 2.86e-38 153
Msa0614290 MtrunA17_Chr7g0265971 26.190 630 390 17 49 641 865 1456 4.62e-44 171
Msa0614290 MtrunA17_Chr7g0265971 25.082 610 401 12 59 627 178 772 1.71e-42 166
Msa0614290 MtrunA17_Chr4g0003971 25.944 609 383 18 59 642 825 1390 5.78e-44 170
Msa0614290 MtrunA17_Chr4g0003971 25.710 634 392 20 58 640 160 765 6.00e-41 161
Msa0614290 MtrunA17_Chr7g0266001 26.045 622 402 14 59 638 63 668 1.93e-43 166
Msa0614290 MtrunA17_Chr1g0148841 25.568 528 348 13 51 559 869 1370 5.49e-43 167
Msa0614290 MtrunA17_Chr1g0148841 26.398 644 375 19 59 641 166 771 1.78e-42 166
Msa0614290 MtrunA17_Chr1g0148811 24.807 649 420 20 19 639 803 1411 9.27e-43 166
Msa0614290 MtrunA17_Chr1g0148811 25.755 629 396 15 59 640 154 758 8.93e-35 142
Msa0614290 MtrunA17_Chr1g0198291 27.132 516 339 15 59 559 894 1387 2.46e-42 165
Msa0614290 MtrunA17_Chr1g0198291 24.242 627 407 15 59 638 189 794 3.61e-33 137
Msa0614290 MtrunA17_Chr1g0199471 38.849 278 151 8 26 295 486 752 2.53e-42 165
Msa0614290 MtrunA17_Chr4g0069211 26.954 627 387 17 53 638 160 756 3.59e-42 164
Msa0614290 MtrunA17_Chr4g0069211 35.922 206 126 3 53 256 840 1041 6.55e-28 120
Msa0614290 MtrunA17_Chr5g0429871 25.130 577 374 12 99 636 18 575 1.68e-41 162
Msa0614290 MtrunA17_Chr5g0429871 27.391 460 276 11 59 492 667 1094 2.12e-40 159
Msa0614290 MtrunA17_Chr7g0261981 25.512 635 404 19 58 646 161 772 7.09e-41 160
Msa0614290 MtrunA17_Chr7g0261981 24.500 600 379 16 59 642 861 1402 3.69e-37 149
Msa0614290 MtrunA17_Chr7g0264441 38.934 244 142 6 55 295 275 514 1.94e-40 159
Msa0614290 MtrunA17_Chr7g0265961 25.515 631 382 20 59 638 182 775 5.73e-40 158
Msa0614290 MtrunA17_Chr7g0265961 24.631 609 395 17 49 641 821 1381 1.36e-35 144
Msa0614290 MtrunA17_Chr1g0180971 36.641 262 153 6 37 295 397 648 3.30e-39 154
Msa0614290 MtrunA17_Chr4g0004021 27.610 431 273 12 59 473 863 1270 1.08e-36 148
Msa0614290 MtrunA17_Chr4g0004021 23.307 635 406 15 58 640 170 775 3.09e-35 143
Msa0614290 MtrunA17_Chr4g0028621 33.969 262 160 6 37 295 491 742 9.28e-34 139
Msa0614290 MtrunA17_Chr3g0093331 35.238 210 130 3 79 285 18 224 8.97e-33 127
Msa0614290 MtrunA17_Chr4g0050241 31.650 297 66 6 359 655 9 168 2.95e-31 120
Msa0614290 MtrunA17_Chr6g0472481 31.858 226 135 4 59 269 13 234 7.60e-29 116
Msa0614290 MtrunA17_Chr7g0262321 27.801 482 273 21 36 481 540 982 2.59e-28 121
Msa0614290 MtrunA17_Chr7g0262321 23.619 525 367 13 159 667 18 524 7.72e-20 94.7
Msa0614290 MtrunA17_Chr4g0026741 54.717 106 34 5 1 94 1 104 2.24e-22 93.6
Msa0614290 MtrunA17_Chr4g0050191 62.500 64 20 1 29 92 33 92 7.48e-16 73.9
Msa0614290 MtrunA17_Chr7g0215001 24.242 396 230 13 206 559 1 368 6.24e-15 77.0
Msa0614290 MtrunA17_Chr7g0249091 30.901 233 129 8 57 268 98 319 1.82e-14 75.5
Msa0614290 MtrunA17_Chr4g0047831 41.860 86 47 1 175 260 1 83 2.94e-14 68.9
Msa0614290 MtrunA17_Chr4g0061601 30.415 217 130 10 59 268 404 606 3.54e-14 75.9
Msa0614290 MtrunA17_Chr4g0050231 72.549 51 8 1 41 91 4 48 4.47e-14 67.4
Msa0614290 MtrunA17_Chr4g0041871 27.972 286 167 14 3 268 295 561 6.11e-14 75.9
Msa0614290 MtrunA17_Chr4g0041871 29.224 219 129 8 59 268 1023 1224 7.13e-14 75.5
Msa0614290 MtrunA17_Chr7g0227391 29.648 199 116 7 59 247 442 626 1.46e-13 74.3
Msa0614290 MtrunA17_Chr1g0178481 32.710 214 120 11 59 263 396 594 6.02e-13 72.0
Msa0614290 MtrunA17_Chr6g0481921 25.796 314 203 10 59 359 288 584 7.94e-13 72.0
Msa0614290 MtrunA17_Chr3g0132711 30.000 190 112 5 60 243 210 384 1.11e-12 71.2
Msa0614290 MtrunA17_Chr1g0194031 27.413 259 163 13 59 304 401 647 1.84e-12 70.9
Msa0614290 MtrunA17_Chr7g0257321 46.552 58 26 1 35 92 1 53 2.00e-12 62.8
Msa0614290 MtrunA17_Chr3g0093041 29.609 179 105 5 71 243 207 370 2.40e-12 70.1
Msa0614290 MtrunA17_Chr1g0193991 31.282 195 116 10 59 247 406 588 4.38e-12 69.7
Msa0614290 MtrunA17_Chr7g0257341 33.163 196 110 7 24 214 541 720 5.01e-12 69.7
Msa0614290 MtrunA17_Chr7g0257341 26.733 202 126 7 49 243 1468 1654 2.57e-11 67.4
Msa0614290 MtrunA17_Chr4g0039221 53.333 60 26 2 35 94 7 64 7.04e-12 61.6
Msa0614290 MtrunA17_Chr7g0264631 33.862 189 101 10 68 247 1107 1280 7.32e-12 68.9
Msa0614290 MtrunA17_Chr3g0119381 31.799 239 133 13 57 280 414 637 7.84e-12 68.9
Msa0614290 MtrunA17_Chr6g0452081 33.333 186 102 9 70 247 51 222 8.86e-12 65.5
Msa0614290 MtrunA17_Chr5g0433051 28.194 227 127 8 57 269 479 683 1.04e-11 68.2
Msa0614290 MtrunA17_Chr2g0285301 26.923 234 147 7 59 280 381 602 1.28e-11 68.2
Msa0614290 MtrunA17_Chr1g0180601 32.836 201 105 11 59 247 1072 1254 2.09e-11 67.8
Msa0614290 MtrunA17_Chr6g0451911 28.854 253 150 11 70 309 389 624 2.76e-11 67.4
Msa0614290 MtrunA17_Chr5g0433071 27.273 220 138 6 57 269 481 685 3.24e-11 66.6
Msa0614290 MtrunA17_Chr6g0463151 27.703 296 172 16 52 341 448 707 3.41e-11 67.0
Msa0614290 MtrunA17_Chr3g0123411 27.434 226 130 9 59 271 922 1126 3.68e-11 66.6
Msa0614290 MtrunA17_Chr6g0452171 29.956 227 127 9 59 272 1037 1244 5.07e-11 66.2
Msa0614290 MtrunA17_Chr6g0472531 25.940 266 167 9 5 269 541 777 5.17e-11 66.2
Msa0614290 MtrunA17_Chr6g0452041 30.102 196 119 5 59 247 1036 1220 6.72e-11 65.9
Msa0614290 MtrunA17_Chr4g0047821 58.696 46 19 0 54 99 45 90 6.79e-11 59.3
Msa0614290 MtrunA17_Chr6g0451881 30.102 196 119 5 59 247 1024 1208 6.94e-11 65.9
Msa0614290 MtrunA17_Chr6g0452111 29.464 224 132 8 59 272 1035 1242 7.32e-11 65.9
Msa0614290 MtrunA17_Chr6g0452111 33.333 186 102 9 70 247 396 567 9.71e-11 65.5
Msa0614290 MtrunA17_Chr6g0452141 31.313 198 114 9 59 247 1034 1218 7.51e-11 65.9
Msa0614290 MtrunA17_Chr6g0452141 31.188 202 119 10 70 262 390 580 8.32e-11 65.9
Msa0614290 MtrunA17_Chr6g0452061 31.222 221 132 8 59 272 546 753 7.82e-11 65.5
Msa0614290 MtrunA17_Chr7g0233901 28.959 221 140 6 58 272 1011 1220 9.32e-11 65.5
Msa0614290 MtrunA17_Chr2g0285191 28.497 193 124 5 59 247 415 597 9.75e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614290 AT1G17840.1 53.014 647 277 6 37 672 50 680 0.0 637
Msa0614290 AT3G21090.1 46.222 675 325 12 12 669 1 654 0.0 587
Msa0614290 AT1G51500.1 44.547 651 332 9 33 669 20 655 0.0 544
Msa0614290 AT1G51460.1 41.892 666 338 10 32 669 5 649 4.48e-176 518
Msa0614290 AT2G28070.2 36.570 618 362 9 34 641 111 708 3.18e-130 402
Msa0614290 AT2G28070.1 36.570 618 362 9 34 641 111 708 3.18e-130 402
Msa0614290 AT3G55110.1 31.009 545 351 9 49 580 81 613 2.14e-79 267
Msa0614290 AT3G55130.1 30.435 552 348 9 52 580 92 630 4.69e-78 264
Msa0614290 AT2G01320.8 31.197 593 365 17 11 586 44 610 5.14e-78 262
Msa0614290 AT2G01320.5 31.197 593 365 17 11 586 44 610 5.14e-78 262
Msa0614290 AT2G37360.1 31.066 544 343 9 56 580 130 660 7.24e-78 264
Msa0614290 AT2G13610.1 28.930 598 397 12 54 641 57 636 1.39e-77 261
Msa0614290 AT2G01320.1 31.250 592 364 17 11 585 44 609 2.75e-77 262
Msa0614290 AT2G01320.4 31.250 592 364 17 11 585 44 609 2.75e-77 262
Msa0614290 AT2G01320.3 31.250 592 364 17 11 585 44 609 3.09e-77 262
Msa0614290 AT2G01320.2 31.250 592 364 17 11 585 44 609 4.22e-77 261
Msa0614290 AT3G53510.1 33.148 540 328 9 56 580 123 644 5.02e-77 261
Msa0614290 AT3G55100.1 30.970 536 341 11 57 580 49 567 2.07e-75 255
Msa0614290 AT3G55100.2 30.970 536 341 11 57 580 49 567 2.07e-75 255
Msa0614290 AT5G13580.1 30.514 603 367 11 1 579 57 631 6.81e-75 255
Msa0614290 AT5G19410.2 27.768 587 372 14 59 635 75 619 4.40e-73 248
Msa0614290 AT5G19410.1 27.768 587 372 14 59 635 66 610 5.78e-73 248
Msa0614290 AT3G55090.1 27.714 700 420 15 4 647 65 734 1.11e-72 249
Msa0614290 AT5G06530.3 32.463 536 326 13 35 546 155 678 9.75e-71 243
Msa0614290 AT5G06530.2 32.246 552 337 14 20 546 139 678 1.36e-70 244
Msa0614290 AT5G06530.1 32.246 552 337 14 20 546 139 678 1.36e-70 244
Msa0614290 AT2G01320.7 32.179 491 294 14 11 485 44 511 5.65e-68 232
Msa0614290 AT2G01320.6 32.179 491 294 14 11 485 44 511 5.65e-68 232
Msa0614290 AT1G53270.1 28.549 634 386 13 20 640 2 581 3.51e-67 231
Msa0614290 AT2G39350.1 29.891 552 348 11 55 579 105 644 1.35e-66 233
Msa0614290 AT4G25750.1 28.620 594 360 18 59 641 30 570 1.45e-66 229
Msa0614290 AT5G52860.1 28.499 593 372 14 53 641 38 582 3.33e-66 229
Msa0614290 AT5G06530.4 32.525 495 298 13 76 546 1 483 1.35e-64 222
Msa0614290 AT1G31770.1 29.302 587 385 14 54 635 76 637 2.19e-64 225
Msa0614290 AT4G27420.1 31.663 499 320 9 55 546 62 546 3.10e-61 216
Msa0614290 AT1G71960.1 30.470 617 371 22 52 642 76 660 8.06e-61 216
Msa0614290 AT3G25620.2 29.322 590 365 19 33 595 64 628 2.51e-60 214
Msa0614290 AT2G29940.1 27.018 570 366 11 31 573 813 1359 1.22e-54 203
Msa0614290 AT2G29940.1 25.781 640 399 15 58 647 174 787 8.38e-49 185
Msa0614290 AT4G15233.5 26.389 648 423 15 42 657 71 696 2.11e-54 202
Msa0614290 AT4G15233.5 26.443 537 349 14 68 585 685 1194 2.97e-44 171
Msa0614290 AT4G15233.4 26.389 648 423 15 42 657 71 696 2.11e-54 202
Msa0614290 AT4G15233.4 26.443 537 349 14 68 585 685 1194 2.97e-44 171
Msa0614290 AT3G13220.1 29.663 563 341 18 57 594 104 636 3.73e-54 197
Msa0614290 AT4G15233.7 26.292 658 430 14 42 669 133 765 4.61e-54 201
Msa0614290 AT4G15233.7 26.289 582 380 15 23 585 768 1319 1.76e-47 181
Msa0614290 AT4G15233.2 25.592 676 430 14 42 669 133 783 2.82e-53 199
Msa0614290 AT4G15233.2 26.863 577 367 17 23 577 786 1329 2.99e-46 177
Msa0614290 AT4G15233.3 25.592 676 430 14 42 669 71 721 3.17e-53 199
Msa0614290 AT4G15233.3 26.289 582 380 15 23 585 724 1275 1.20e-47 182
Msa0614290 AT4G15233.6 25.592 676 430 14 42 669 71 721 3.17e-53 199
Msa0614290 AT4G15233.6 26.289 582 380 15 23 585 724 1275 1.20e-47 182
Msa0614290 AT4G15233.1 25.592 676 430 14 42 669 133 783 3.25e-53 199
Msa0614290 AT4G15233.1 26.289 582 380 15 23 585 786 1337 1.67e-47 181
Msa0614290 AT4G15215.11 26.462 650 402 16 42 640 131 755 2.89e-52 196
Msa0614290 AT4G15215.11 26.325 566 368 14 33 579 801 1336 3.44e-48 183
Msa0614290 AT4G15215.9 26.462 650 402 16 42 640 128 752 3.43e-52 196
Msa0614290 AT4G15215.9 26.325 566 368 14 33 579 798 1333 3.73e-48 183
Msa0614290 AT4G15215.4 26.462 650 402 16 42 640 128 752 3.43e-52 196
Msa0614290 AT4G15215.4 26.325 566 368 14 33 579 798 1333 3.73e-48 183
Msa0614290 AT4G15215.5 26.462 650 402 16 42 640 128 752 3.43e-52 196
Msa0614290 AT4G15215.5 26.325 566 368 14 33 579 798 1333 3.73e-48 183
Msa0614290 AT4G15215.3 26.462 650 402 16 42 640 128 752 3.43e-52 196
Msa0614290 AT4G15215.3 26.325 566 368 14 33 579 798 1333 3.73e-48 183
Msa0614290 AT4G15215.2 26.462 650 402 16 42 640 128 752 3.43e-52 196
Msa0614290 AT4G15215.2 26.325 566 368 14 33 579 798 1333 3.73e-48 183
Msa0614290 AT4G15215.8 26.769 650 393 17 42 640 128 745 3.96e-52 195
Msa0614290 AT4G15215.8 26.325 566 368 14 33 579 791 1326 3.65e-48 183
Msa0614290 AT4G15215.10 26.769 650 393 17 42 640 128 745 3.96e-52 195
Msa0614290 AT4G15215.10 26.325 566 368 14 33 579 791 1326 3.65e-48 183
Msa0614290 AT4G15215.6 26.769 650 393 17 42 640 128 745 3.96e-52 195
Msa0614290 AT4G15215.6 26.325 566 368 14 33 579 791 1326 3.65e-48 183
Msa0614290 AT4G15215.7 26.769 650 393 17 42 640 128 745 3.96e-52 195
Msa0614290 AT4G15215.7 26.325 566 368 14 33 579 791 1326 3.65e-48 183
Msa0614290 AT4G15215.1 26.769 650 393 17 42 640 131 748 4.55e-52 195
Msa0614290 AT4G15215.1 26.325 566 368 14 33 579 794 1329 4.47e-48 183
Msa0614290 AT1G59870.1 27.444 532 343 12 51 567 886 1389 3.28e-51 192
Msa0614290 AT1G59870.1 25.118 633 399 15 58 640 185 792 2.66e-40 159
Msa0614290 AT3G25620.1 36.503 326 187 9 33 343 64 384 3.07e-50 182
Msa0614290 AT4G15236.1 25.227 662 432 12 33 650 126 768 3.25e-50 189
Msa0614290 AT4G15236.1 26.396 591 382 16 16 585 777 1335 8.63e-49 185
Msa0614290 AT2G37280.1 26.519 675 418 19 14 636 104 752 7.23e-50 189
Msa0614290 AT2G37280.1 27.207 555 356 15 33 567 809 1335 3.25e-47 181
Msa0614290 AT2G37280.2 26.519 675 418 19 14 636 104 752 7.24e-50 189
Msa0614290 AT2G37280.2 27.289 546 345 14 33 555 809 1325 2.21e-46 178
Msa0614290 AT1G15210.1 27.052 536 358 11 59 580 867 1383 1.40e-49 187
Msa0614290 AT1G15210.1 25.000 636 407 16 58 646 183 795 2.16e-40 160
Msa0614290 AT3G53480.1 26.646 653 381 21 46 638 175 789 1.60e-49 187
Msa0614290 AT3G53480.1 25.284 617 388 17 15 590 816 1400 6.92e-45 173
Msa0614290 AT3G16340.1 26.829 533 345 13 51 567 833 1336 1.93e-49 187
Msa0614290 AT3G16340.1 26.268 552 350 12 58 563 161 701 3.15e-38 153
Msa0614290 AT3G16340.2 26.829 533 345 13 51 567 828 1331 2.31e-49 187
Msa0614290 AT3G16340.2 26.401 553 343 14 58 563 161 696 6.15e-37 149
Msa0614290 AT4G15233.8 25.444 676 422 15 42 669 133 774 2.89e-49 187
Msa0614290 AT4G15233.8 26.289 582 380 15 23 585 777 1328 1.49e-47 181
Msa0614290 AT4G15230.2 25.192 651 419 14 33 638 129 756 7.01e-49 186
Msa0614290 AT4G15230.2 26.460 548 350 17 33 556 804 1322 3.29e-45 174
Msa0614290 AT4G15230.4 25.115 653 417 14 33 638 50 677 9.72e-49 185
Msa0614290 AT4G15230.4 25.618 566 372 16 33 579 725 1260 4.15e-47 180
Msa0614290 AT4G15230.3 25.192 651 419 14 33 638 129 756 9.76e-49 185
Msa0614290 AT4G15230.3 25.618 566 372 16 33 579 804 1339 4.09e-47 180
Msa0614290 AT4G15230.1 25.192 651 419 14 33 638 129 756 9.76e-49 185
Msa0614290 AT4G15230.1 25.618 566 372 16 33 579 804 1339 4.09e-47 180
Msa0614290 AT1G15520.1 25.753 664 413 20 13 642 796 1413 2.25e-47 181
Msa0614290 AT1G15520.1 25.197 635 411 15 58 648 168 782 2.25e-44 172
Msa0614290 AT2G37280.3 27.207 555 356 15 33 567 838 1364 3.77e-47 180
Msa0614290 AT2G37280.3 25.426 704 418 20 14 636 104 781 8.65e-45 173
Msa0614290 AT2G37280.4 27.207 555 356 15 33 567 651 1177 5.50e-47 180
Msa0614290 AT2G37280.4 26.427 613 378 16 71 636 8 594 8.84e-45 173
Msa0614290 AT1G15520.2 24.763 634 415 13 58 648 168 782 3.83e-44 171
Msa0614290 AT1G15520.2 28.571 483 293 16 13 467 796 1254 1.86e-38 154
Msa0614290 AT1G53390.1 36.981 265 154 6 37 298 507 761 1.80e-42 166
Msa0614290 AT2G36380.1 25.596 629 400 14 59 640 188 795 1.36e-41 163
Msa0614290 AT2G36380.1 25.331 529 352 13 49 559 869 1372 7.48e-39 155
Msa0614290 AT2G37010.2 36.585 287 161 8 37 320 484 752 2.50e-41 162
Msa0614290 AT2G37010.1 36.585 287 161 8 37 320 484 752 2.50e-41 162
Msa0614290 AT3G30842.1 27.172 541 332 16 44 555 826 1333 2.56e-41 162
Msa0614290 AT3G30842.1 25.627 558 348 15 58 564 160 701 1.59e-39 157
Msa0614290 AT2G26910.1 25.509 639 401 17 51 640 143 755 4.53e-41 162
Msa0614290 AT2G26910.1 24.904 522 359 9 51 559 837 1338 2.04e-40 160
Msa0614290 AT1G66950.1 25.276 633 397 14 59 640 190 797 2.84e-40 159
Msa0614290 AT1G66950.1 24.482 531 354 13 49 559 870 1373 6.05e-38 152
Msa0614290 AT5G60740.1 33.588 262 161 6 37 295 499 750 4.69e-33 137
Msa0614290 AT3G21080.1 36.111 144 77 4 510 648 106 239 1.57e-17 83.6
Msa0614290 AT5G61700.2 28.218 202 126 5 54 248 610 799 3.26e-14 77.0
Msa0614290 AT5G61700.4 28.218 202 126 5 54 248 610 799 3.26e-14 77.0
Msa0614290 AT3G47730.1 27.481 262 155 8 1 243 476 721 1.37e-13 75.1
Msa0614290 AT1G70610.2 27.059 255 154 9 53 295 285 519 1.90e-13 73.9
Msa0614290 AT5G61700.1 27.919 197 119 6 54 243 610 790 2.28e-13 74.3
Msa0614290 AT1G27940.1 30.412 194 119 6 59 247 388 570 2.50e-13 74.3
Msa0614290 AT1G27940.1 29.167 216 133 8 59 268 1021 1222 2.86e-11 67.8
Msa0614290 AT1G70610.1 27.059 255 154 9 53 295 466 700 2.93e-13 73.6
Msa0614290 AT1G27940.2 30.412 194 119 6 59 247 174 356 3.02e-13 73.9
Msa0614290 AT1G27940.2 29.167 216 133 8 59 268 807 1008 2.52e-11 67.8
Msa0614290 AT5G39040.1 30.638 235 137 11 56 282 410 626 3.41e-13 73.6
Msa0614290 AT1G28010.1 30.412 194 119 7 59 247 389 571 5.36e-13 73.2
Msa0614290 AT1G28010.1 31.336 217 129 9 58 268 1022 1224 9.63e-11 65.9
Msa0614290 AT4G33460.1 27.869 244 152 7 35 277 38 258 5.44e-13 70.5
Msa0614290 AT5G61690.2 30.366 191 110 7 60 243 548 722 8.12e-13 72.4
Msa0614290 AT5G61730.2 28.244 262 153 10 1 243 478 723 1.01e-12 72.0
Msa0614290 AT5G61730.1 30.890 191 109 7 60 243 539 713 2.28e-12 70.9
Msa0614290 AT3G47750.1 25.269 186 124 5 54 234 630 805 3.02e-12 70.5
Msa0614290 AT2G41700.2 32.308 195 113 7 24 214 466 645 3.48e-12 70.9
Msa0614290 AT2G41700.2 26.633 199 124 6 52 243 1424 1607 4.53e-11 67.0
Msa0614290 AT3G47780.1 25.128 195 127 6 54 243 628 808 3.90e-12 70.1
Msa0614290 AT2G47000.4 30.698 215 124 11 40 247 387 583 4.17e-12 70.1
Msa0614290 AT2G47000.3 30.698 215 124 11 40 247 387 583 4.34e-12 70.1
Msa0614290 AT2G47000.7 30.698 215 124 11 40 247 387 583 4.34e-12 70.1
Msa0614290 AT3G47790.2 25.405 185 125 4 54 234 482 657 5.05e-12 69.7
Msa0614290 AT2G47000.2 30.698 215 124 11 40 247 387 583 5.49e-12 70.1
Msa0614290 AT2G41700.1 32.308 195 113 7 24 214 536 715 5.63e-12 70.1
Msa0614290 AT2G41700.1 26.633 199 124 6 52 243 1466 1649 5.44e-11 67.0
Msa0614290 AT3G47790.3 25.405 185 125 4 54 234 601 776 5.70e-12 69.7
Msa0614290 AT2G47000.6 30.698 215 124 11 40 247 387 583 6.41e-12 69.7
Msa0614290 AT2G47000.5 30.698 215 124 11 40 247 387 583 6.41e-12 69.7
Msa0614290 AT2G47000.1 30.698 215 124 11 40 247 387 583 6.41e-12 69.7
Msa0614290 AT4G28620.1 29.744 195 123 5 57 247 452 636 7.97e-12 68.9
Msa0614290 AT3G47770.1 26.141 241 145 10 5 224 539 767 8.03e-12 69.3
Msa0614290 AT3G28390.1 32.178 202 117 10 70 262 375 565 8.10e-12 69.3
Msa0614290 AT3G28390.1 29.412 221 136 6 59 272 997 1204 8.90e-12 69.3
Msa0614290 AT3G47790.1 25.773 194 127 5 54 243 601 781 8.53e-12 69.3
Msa0614290 AT5G61740.3 24.576 236 154 8 13 243 427 643 9.62e-12 68.9
Msa0614290 AT3G47770.2 26.141 241 145 10 5 224 565 793 1.02e-11 68.9
Msa0614290 AT1G10680.2 31.351 185 107 9 70 247 389 560 1.43e-11 68.6
Msa0614290 AT1G10680.1 31.351 185 107 9 70 247 389 560 1.66e-11 68.6
Msa0614290 AT5G61740.2 25.714 210 136 7 13 217 532 726 1.67e-11 68.2
Msa0614290 AT3G28360.1 30.198 202 121 9 70 262 374 564 1.83e-11 68.2
Msa0614290 AT5G61740.1 25.714 210 136 7 13 217 566 760 1.84e-11 68.2
Msa0614290 AT5G61690.1 29.016 193 109 7 60 243 548 721 1.87e-11 68.2
Msa0614290 AT3G28380.1 32.020 203 118 10 69 262 386 577 2.15e-11 68.2
Msa0614290 AT3G28415.1 29.108 213 125 8 70 272 1004 1200 3.15e-11 67.4
Msa0614290 AT3G28415.2 29.108 213 125 8 70 272 1012 1208 3.91e-11 67.0
Msa0614290 AT4G25960.1 29.808 208 120 10 70 268 429 619 4.26e-11 67.0
Msa0614290 AT1G02530.2 29.091 220 138 9 57 271 383 589 6.54e-11 66.2
Msa0614290 AT3G47760.1 24.260 169 113 5 54 217 589 747 6.85e-11 66.2
Msa0614290 AT1G02530.1 29.091 220 138 9 57 271 383 589 7.37e-11 66.2
Msa0614290 AT3G47760.3 24.260 169 113 5 54 217 629 787 8.06e-11 65.9
Msa0614290 AT3G28345.1 31.188 202 119 9 70 262 387 577 8.60e-11 66.2
Msa0614290 AT3G47760.2 24.260 169 113 5 54 217 599 757 9.29e-11 65.9

Find 133 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTATAGTATTGTCTTTAA+AGG 0.148699 4_2:-63276815 Msa0614290:intron
ATGATCTTCCTAAGCCATTT+TGG 0.191105 4_2:-63275710 Msa0614290:CDS
GTTTAACTTGGAAAGATCTA+TGG 0.208034 4_2:-63279320 Msa0614290:CDS
GATATCAATTGCTTGTTCTA+TGG 0.227852 4_2:+63276900 None:intergenic
ATTGGAGGGTGGGGTGTTAA+AGG 0.234899 4_2:-63277908 Msa0614290:CDS
ACTGAAATCATCAGCAAATA+TGG 0.242245 4_2:+63275948 None:intergenic
TCCTTCAAACTCATTCTTAT+AGG 0.242385 4_2:+63275638 None:intergenic
AGCCACTGTCTTTAATGATT+TGG 0.262428 4_2:-63276563 Msa0614290:CDS
TTTAATTTCTTGGTTTCTTT+CGG 0.280423 4_2:+63276855 None:intergenic
TACCCTCCAGGTCTTCAAAA+AGG 0.282844 4_2:-63275903 Msa0614290:CDS
CTTTCAATCTCTAGGATATT+AGG 0.283672 4_2:+63279402 None:intergenic
ATAATTCCCATTAGAAAATC+AGG 0.292917 4_2:+63275792 None:intergenic
TTTGAACGTGAAAGACTAAA+TGG 0.294897 4_2:-63276020 Msa0614290:CDS
AATAGCTTCCTTGGACAAAA+AGG 0.296864 4_2:-63277759 Msa0614290:CDS
CTGATGATTTCAGTCATTCC+TGG 0.309905 4_2:-63275939 Msa0614290:CDS
CGAAAGCAAATCAATTCTTC+AGG 0.317266 4_2:-63279265 Msa0614290:CDS
TTCGTGATCTTGGCTATTAT+TGG 0.317963 4_2:-63276624 Msa0614290:CDS
TAAAAGTAACGGCTCAATTC+AGG 0.320224 4_2:-63276539 Msa0614290:intron
TTTCTAATGGGAATTATAAC+TGG 0.321531 4_2:-63275786 Msa0614290:CDS
TTGGCTATAATGGGTCCTTC+TGG 0.326290 4_2:-63279210 Msa0614290:CDS
TGCAAAGCCAGGTCAGCTTT+TGG 0.346322 4_2:-63279229 Msa0614290:CDS
CATGTTCACGAAAGATCTTC+TGG 0.346610 4_2:+63276648 None:intergenic
CACGGCTTCTTTAACGGTTA+AGG 0.348299 4_2:+63278042 None:intergenic
GGTGTAACTGCATATGTAAT+TGG 0.355346 4_2:-63275990 Msa0614290:CDS
AAATTTGAAAGAGATGAAAT+TGG 0.358441 4_2:-63275612 Msa0614290:CDS
AACATAGGGTATCTCCAAAA+TGG 0.359167 4_2:+63275696 None:intergenic
TACTCAAAGTGGGTTGATCT+TGG 0.362481 4_2:-63275513 Msa0614290:CDS
AACAAACAAGCATTGGCTTA+TGG 0.366572 4_2:-63278280 Msa0614290:CDS
TGTTCTATATTGCCTTTCAT+AGG 0.369421 4_2:-63275677 Msa0614290:CDS
GATGCAATCAACACAAGAAT+TGG 0.372547 4_2:-63277926 Msa0614290:CDS
GTGAACATGTTTCGTGATCT+TGG 0.373144 4_2:-63276634 Msa0614290:CDS
GGTTCAAACACAAGACAATC+AGG 0.375821 4_2:-63278322 Msa0614290:CDS
TGGGGTGTTAAAGGCATAAG+TGG 0.376232 4_2:-63277899 Msa0614290:CDS
AAACTTCAGTACTAGGTTGA+TGG 0.382630 4_2:+63277705 None:intergenic
AGAAGGGTATTTGTTTAACT+TGG 0.383966 4_2:-63279332 Msa0614290:CDS
ATAGTACACGGCTTCTTTAA+CGG 0.384633 4_2:+63278036 None:intergenic
ATATGTATTTCAGGGAGATT+AGG 0.390555 4_2:-63278343 Msa0614290:intron
ATAACTGGTGCTGGAATTCA+AGG 0.393286 4_2:-63275771 Msa0614290:CDS
CACCAATGGTCATGAAAGTT+AGG 0.401646 4_2:+63276384 None:intergenic
TATGAAAAGAATAGCTTCCT+TGG 0.410861 4_2:-63277768 Msa0614290:CDS
TGGTGGATTCCCTTCTTATG+TGG 0.415254 4_2:-63276366 Msa0614290:CDS
AGTCGAATATATAGACAGTT+TGG 0.415658 4_2:+63279481 None:intergenic
TCTGGTAAAACAGTTTACTT+TGG 0.418441 4_2:-63277650 Msa0614290:CDS
GGTTGATCTTGGAGTATTGT+TGG 0.424413 4_2:-63275502 Msa0614290:CDS
GGCTATTATTGGTTACGCCT+TGG 0.429860 4_2:-63276613 Msa0614290:CDS
AATGGCTTAGGAAGATCATT+TGG 0.432941 4_2:+63275714 None:intergenic
GTTGATCTTGGAGTATTGTT+GGG 0.434086 4_2:-63275501 Msa0614290:CDS
GTTACTGTTTCTGCTTCAAC+AGG 0.435428 4_2:-63279297 Msa0614290:CDS
CACTTATGTCGGTGTCTCCT+AGG 0.440631 4_2:-63275404 Msa0614290:CDS
AAGAATTGATTTGCTTTCGT+TGG 0.440800 4_2:+63279269 None:intergenic
GGGGTGTTAAAGGCATAAGT+GGG 0.451027 4_2:-63277898 Msa0614290:CDS
TTGATGGATTGAGGCAATAA+TGG 0.456241 4_2:+63277721 None:intergenic
GAAAGACTAAATGGACACTA+TGG 0.458475 4_2:-63276011 Msa0614290:CDS
TTCCTAACTTTCATGACCAT+TGG 0.458620 4_2:-63276386 Msa0614290:CDS
ATGGGAATTATAACTGGTGC+TGG 0.464324 4_2:-63275780 Msa0614290:CDS
GGGTATCTCCAAAATGGCTT+AGG 0.470999 4_2:+63275702 None:intergenic
TTGTGTCAGGTAATTGAAGT+TGG 0.471985 4_2:+63278008 None:intergenic
TCTTCATTAGACATTGTGTC+AGG 0.473825 4_2:+63277995 None:intergenic
TCAATTCTTCAGGGTCTGAC+TGG 0.475591 4_2:-63279255 Msa0614290:CDS
GAGATGGATTTAGCAGAGAC+TGG 0.477488 4_2:-63276931 Msa0614290:CDS
CTAACTTTCATGACCATTGG+TGG 0.478663 4_2:-63276383 Msa0614290:CDS
TTCATGTCCTCCACATAAGA+AGG 0.479736 4_2:+63276356 None:intergenic
GATGAATGGAGGAGAAGAGA+AGG 0.480513 4_2:-63279349 Msa0614290:CDS
ATAATGGGTCCTTCTGGTTG+TGG 0.481002 4_2:-63279204 Msa0614290:CDS
GATGAAATTGGTGGTGGTGG+TGG 0.481966 4_2:-63275600 Msa0614290:CDS
GACATAAGTGACATAACAAT+AGG 0.486627 4_2:+63275417 None:intergenic
TAGGCAAACAAGACAAGTCT+TGG 0.487764 4_2:-63275385 Msa0614290:CDS
ACCTCAGATGCAGCAGAAGC+AGG 0.491581 4_2:+63277626 None:intergenic
TTTAACTTGGAAAGATCTAT+GGG 0.492215 4_2:-63279319 Msa0614290:CDS
ACACTTCTTGATGCTTTAGC+AGG 0.497837 4_2:-63279174 Msa0614290:intron
AGTACTAGGTTGATGGATTG+AGG 0.499081 4_2:+63277712 None:intergenic
AAGACTTGTCTTGTTTGCCT+AGG 0.501633 4_2:+63275387 None:intergenic
TGAAAGGCAATATAGAACAT+AGG 0.502086 4_2:+63275681 None:intergenic
CCTTGGCATATATATTGCAT+TGG 0.503427 4_2:-63276596 Msa0614290:CDS
GGATCACTCAATTACATTAG+TGG 0.505948 4_2:-63275576 Msa0614290:CDS
TATTAGGCACAGATGAAAGA+AGG 0.506902 4_2:+63279418 None:intergenic
TTCTTATGTGGAGGACATGA+AGG 0.508636 4_2:-63276354 Msa0614290:intron
GCCATAGCATATTACCCTCC+AGG 0.509466 4_2:-63275915 Msa0614290:CDS
GAAAGCAAATCAATTCTTCA+GGG 0.510778 4_2:-63279264 Msa0614290:CDS
GGGTAATATGCTATGGCTCC+AGG 0.511427 4_2:+63275921 None:intergenic
CTCTTGCGCTTTCAATCTCT+AGG 0.511830 4_2:+63279394 None:intergenic
AACACAAGAATTGGAGGGTG+GGG 0.512629 4_2:-63277917 Msa0614290:CDS
ACCTGCTTCTGCTGCATCTG+AGG 0.514345 4_2:-63277627 Msa0614290:intron
TATACAACATCTACATGTAA+AGG 0.517175 4_2:+63275345 None:intergenic
GAAAGGCAATATAGAACATA+GGG 0.518508 4_2:+63275682 None:intergenic
ATGAATGGAGGAGAAGAGAA+GGG 0.520708 4_2:-63279348 Msa0614290:CDS
AATGATTTGGATAAAAGTAA+CGG 0.521433 4_2:-63276550 Msa0614290:CDS
AGAGATGAAATTGGTGGTGG+TGG 0.529076 4_2:-63275603 Msa0614290:CDS
TGGATTCCCTTCTTATGTGG+AGG 0.531042 4_2:-63276363 Msa0614290:CDS
CAATGGCAACAAACAAGCAT+TGG 0.531389 4_2:-63278287 Msa0614290:CDS
GATTGAAAGCGCAAGAGAAG+AGG 0.532796 4_2:-63279388 Msa0614290:CDS
TTGATATGAGTTACTCAAAG+TGG 0.535183 4_2:-63275524 Msa0614290:CDS
TCCTATAAGAATGAGTTTGA+AGG 0.541363 4_2:-63275639 Msa0614290:CDS
ACCTGGAGGGTAATATGCTA+TGG 0.542119 4_2:+63275914 None:intergenic
TATTGTTATGTCACTTATGT+CGG 0.544402 4_2:-63275415 Msa0614290:CDS
CAAGGAATTATGATGTTGGC+TGG 0.550329 4_2:-63275753 Msa0614290:CDS
GCACTATCAAGTCCACTAGT+TGG 0.553890 4_2:+63277806 None:intergenic
ATATAGACAGTTTGGCATGA+GGG 0.558443 4_2:+63279489 None:intergenic
GCAATCAACACAAGAATTGG+AGG 0.560697 4_2:-63277923 Msa0614290:CDS
TGTGTCAGGTAATTGAAGTT+GGG 0.561591 4_2:+63278009 None:intergenic
ATCCAAATCATTAAAGACAG+TGG 0.564200 4_2:+63276561 None:intergenic
CAACACAAGAATTGGAGGGT+GGG 0.564826 4_2:-63277918 Msa0614290:CDS
CTGACTGGTTATGCAAAGCC+AGG 0.567099 4_2:-63279240 Msa0614290:CDS
ATTATAGCCAAAAGCTGACC+TGG 0.570027 4_2:+63279222 None:intergenic
TTGAAAAGCATACCTATGAA+AGG 0.573338 4_2:+63275665 None:intergenic
TGATATGAGTTACTCAAAGT+GGG 0.574550 4_2:-63275523 Msa0614290:CDS
GGGTGTTAAAGGCATAAGTG+GGG 0.578959 4_2:-63277897 Msa0614290:CDS
ACATGTAAAGGAGTGGCACT+AGG 0.582274 4_2:+63275357 None:intergenic
TTTCTTGACGAACCAACTAG+TGG 0.584184 4_2:-63277818 Msa0614290:CDS
TTTGAAAGAGATGAAATTGG+TGG 0.584768 4_2:-63275609 Msa0614290:CDS
GAAAGCGCAAGAGAAGAGGT+AGG 0.592493 4_2:-63279384 Msa0614290:CDS
GAAAGAGATGAAATTGGTGG+TGG 0.595546 4_2:-63275606 Msa0614290:CDS
TATATAGACAGTTTGGCATG+AGG 0.598734 4_2:+63279488 None:intergenic
TCAATGTTAGGATATTGAGA+TGG 0.603713 4_2:-63276947 Msa0614290:intron
TAATTCCCATTAGAAAATCA+GGG 0.604509 4_2:+63275793 None:intergenic
CCAATGCAATATATATGCCA+AGG 0.604975 4_2:+63276596 None:intergenic
AATTCAAGGAATTATGATGT+TGG 0.605834 4_2:-63275757 Msa0614290:CDS
GTTCAAACACAAGACAATCA+GGG 0.607925 4_2:-63278321 Msa0614290:CDS
TTTGCTTAAAACTATAAACA+AGG 0.608099 4_2:-63277464 Msa0614290:CDS
ATTAGGCACAGATGAAAGAA+GGG 0.612796 4_2:+63279419 None:intergenic
TAAGAACTAAGCACTGATTG+AGG 0.623135 4_2:+63276671 None:intergenic
ATGAAGAATATGAGCTCACA+AGG 0.626092 4_2:+63276878 None:intergenic
TTCAAACACAAGACAATCAG+GGG 0.633055 4_2:-63278320 Msa0614290:CDS
TCATGTCCTCCACATAAGAA+GGG 0.633774 4_2:+63276357 None:intergenic
TCAACACAAGAATTGGAGGG+TGG 0.634185 4_2:-63277919 Msa0614290:CDS
AGCATTGGCTTATGGAACCT+CGG 0.634970 4_2:-63278272 Msa0614290:intron
GGAATTATGATGTTGGCTGG+TGG 0.637845 4_2:-63275750 Msa0614290:CDS
AACATCTACATGTAAAGGAG+TGG 0.640252 4_2:+63275350 None:intergenic
ATTCTTATATGTTCACAACA+TGG 0.654855 4_2:-63279445 Msa0614290:exon
AAGTTGGGCTGAATAGTACA+CGG 0.665709 4_2:+63278024 None:intergenic
CAATCAACACAAGAATTGGA+GGG 0.667741 4_2:-63277922 Msa0614290:CDS
ATAAGAAGGGAATCCACCAA+TGG 0.674842 4_2:+63276370 None:intergenic
GGTGTTAAAGGCATAAGTGG+GGG 0.724955 4_2:-63277896 Msa0614290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATATTTATATACAAATTAT+TGG - chr4_2:63276353-63276372 Msa0614290:intron 10.0%
!!! ATTATTTTTATATGTATTTC+AGG - chr4_2:63276509-63276528 Msa0614290:intron 10.0%
!!! TTATTTTTATATGTATTTCA+GGG - chr4_2:63276510-63276529 Msa0614290:intron 10.0%
!!! TTTGACTTTATAATCTTAAA+TGG - chr4_2:63276058-63276077 Msa0614290:intron 15.0%
!! AAACAGAATTAATTACTAAA+TGG + chr4_2:63277310-63277329 None:intergenic 15.0%
!! ATATGTTGTAATACTAATTA+TGG + chr4_2:63277853-63277872 None:intergenic 15.0%
!!! ATACTTCATTTTTAATTTCT+TGG + chr4_2:63278019-63278038 None:intergenic 15.0%
!!! CACTAAATTATTGTTTTATT+CGG - chr4_2:63278780-63278799 Msa0614290:intron 15.0%
!!! CATATGTTATTAATTTGTAT+AGG - chr4_2:63278816-63278835 Msa0614290:intron 15.0%
!! ATATTGTTGAAATAGTATGT+TGG + chr4_2:63275787-63275806 None:intergenic 20.0%
!!! ATTTTGTATATTGTTTCTCA+AGG - chr4_2:63275819-63275838 Msa0614290:CDS 20.0%
!!! TGTGTTTTTAATTCTTAAAC+AGG - chr4_2:63276256-63276275 Msa0614290:intron 20.0%
!! TTTATATACAAATTATTGGG+TGG - chr4_2:63276357-63276376 Msa0614290:CDS 20.0%
!! TTATATACAAATTATTGGGT+GGG - chr4_2:63276358-63276377 Msa0614290:CDS 20.0%
!!! TTTAGATTTTATATATACCG+AGG + chr4_2:63276609-63276628 None:intergenic 20.0%
!!! CTACAATTTGTTTTTATTGA+AGG + chr4_2:63276634-63276653 None:intergenic 20.0%
!!! TGATTTTACAATAAGAGAAA+TGG - chr4_2:63276904-63276923 Msa0614290:CDS 20.0%
!!! GATTTTACAATAAGAGAAAT+GGG - chr4_2:63276905-63276924 Msa0614290:CDS 20.0%
!!! TATAGTTTTAAGCAAATGAT+CGG + chr4_2:63277393-63277412 None:intergenic 20.0%
!! TTTGCTTAAAACTATAAACA+AGG - chr4_2:63277397-63277416 Msa0614290:intron 20.0%
!! GTTGAATCTTCAATTATTTA+AGG - chr4_2:63277721-63277740 Msa0614290:CDS 20.0%
!!! ACATTGAATCAACTTTTATT+AGG + chr4_2:63277783-63277802 None:intergenic 20.0%
!! TTGAAATATGTTTCAATGTT+AGG - chr4_2:63277902-63277921 Msa0614290:CDS 20.0%
!!! TTTAATTTCTTGGTTTCTTT+CGG + chr4_2:63278009-63278028 None:intergenic 20.0%
!!! TAAATTTAGCTCAAATTTAG+AGG + chr4_2:63278075-63278094 None:intergenic 20.0%
!!! AATGATTTGGATAAAAGTAA+CGG - chr4_2:63278311-63278330 Msa0614290:CDS 20.0%
!! GCAAATATATATTGAATGAA+TGG - chr4_2:63278576-63278595 Msa0614290:intron 20.0%
!! AAATTTGAAAGAGATGAAAT+TGG - chr4_2:63279249-63279268 Msa0614290:CDS 20.0%
!!! GTACATTTAATTTTGTTTTG+TGG - chr4_2:63279543-63279562 Msa0614290:five_prime_UTR 20.0%
! ATTCTTATATGTTCACAACA+TGG - chr4_2:63275416-63275435 Msa0614290:CDS 25.0%
!!! TTTAACTTGGAAAGATCTAT+GGG - chr4_2:63275542-63275561 Msa0614290:CDS 25.0%
!!! ACCTTATGTTTTAAAGTTCA+TGG - chr4_2:63275917-63275936 Msa0614290:CDS 25.0%
!!! ATGGCTTCTATTTCATTTTT+TGG - chr4_2:63275943-63275962 Msa0614290:CDS 25.0%
! GAAAAACATGTGTTAATCAA+AGG + chr4_2:63276001-63276020 None:intergenic 25.0%
!! TTGATTAACACATGTTTTTC+TGG - chr4_2:63276001-63276020 Msa0614290:CDS 25.0%
! GCTACATATTACTAGTAATT+TGG - chr4_2:63276138-63276157 Msa0614290:intron 25.0%
! CATATTACTAGTAATTTGGT+TGG - chr4_2:63276142-63276161 Msa0614290:intron 25.0%
!!! GTTTTTAATTCTTAAACAGG+AGG - chr4_2:63276259-63276278 Msa0614290:intron 25.0%
! TAATATGTATATGTGATCAC+AGG - chr4_2:63276763-63276782 Msa0614290:intron 25.0%
! TTCAAAGCAAAAAACTACAT+TGG + chr4_2:63277338-63277357 None:intergenic 25.0%
!!! ATGTAGTTTTTTGCTTTGAA+CGG - chr4_2:63277338-63277357 Msa0614290:intron 25.0%
!!! TATAAACAAGGATTTTGATC+AGG - chr4_2:63277409-63277428 Msa0614290:intron 25.0%
! ACAAAGTTGACATAAAAACA+TGG + chr4_2:63277664-63277683 None:intergenic 25.0%
! GTCTATAGTATTGTCTTTAA+AGG - chr4_2:63278046-63278065 Msa0614290:CDS 25.0%
! AGGTCAGTTAATGTAATATA+AGG + chr4_2:63278360-63278379 None:intergenic 25.0%
! TTAGCTAAAGTCTAAACTTT+AGG + chr4_2:63278380-63278399 None:intergenic 25.0%
!! AGTTCATAACTTTTGTGAAT+TGG - chr4_2:63278638-63278657 Msa0614290:intron 25.0%
! TATCATTCAAAATTATCCCT+CGG - chr4_2:63278686-63278705 Msa0614290:intron 25.0%
!!! TTGTTTTATTCGGTCTTTTA+TGG - chr4_2:63278790-63278809 Msa0614290:intron 25.0%
!! ATTTTCTTGTCTAATGTTAG+TGG - chr4_2:63279014-63279033 Msa0614290:intron 25.0%
! TAATTCCCATTAGAAAATCA+GGG + chr4_2:63279071-63279090 None:intergenic 25.0%
! ATAATTCCCATTAGAAAATC+AGG + chr4_2:63279072-63279091 None:intergenic 25.0%
! TTTCTAATGGGAATTATAAC+TGG - chr4_2:63279075-63279094 Msa0614290:intron 25.0%
! AATTCAAGGAATTATGATGT+TGG - chr4_2:63279104-63279123 Msa0614290:intron 25.0%
!! TATTGTTATGTCACTTATGT+CGG - chr4_2:63279446-63279465 Msa0614290:exon 25.0%
! TATACAACATCTACATGTAA+AGG + chr4_2:63279519-63279538 None:intergenic 25.0%
AGTCGAATATATAGACAGTT+TGG + chr4_2:63275383-63275402 None:intergenic 30.0%
!! CTTTCAATCTCTAGGATATT+AGG + chr4_2:63275462-63275481 None:intergenic 30.0%
!! AGAAGGGTATTTGTTTAACT+TGG - chr4_2:63275529-63275548 Msa0614290:CDS 30.0%
!! GTTTAACTTGGAAAGATCTA+TGG - chr4_2:63275541-63275560 Msa0614290:CDS 30.0%
!! AAGAATTGATTTGCTTTCGT+TGG + chr4_2:63275595-63275614 None:intergenic 30.0%
GAAAGCAAATCAATTCTTCA+GGG - chr4_2:63275597-63275616 Msa0614290:CDS 30.0%
AAGTTAGTTATTTGCATGCA+TGG + chr4_2:63275729-63275748 None:intergenic 30.0%
AGGAAGTTATATATAGCAGT+TGG + chr4_2:63275752-63275771 None:intergenic 30.0%
!! TATGTTGGTGATTTGGATTT+AGG + chr4_2:63275772-63275791 None:intergenic 30.0%
!! GAAATAGTATGTTGGTGATT+TGG + chr4_2:63275779-63275798 None:intergenic 30.0%
!! GCCATGAACTTTAAAACATA+AGG + chr4_2:63275921-63275940 None:intergenic 30.0%
TGGCAAAATTCAAATCTCTT+CGG - chr4_2:63276078-63276097 Msa0614290:intron 30.0%
TGGTTGGAATTAAACTAAGA+AGG - chr4_2:63276158-63276177 Msa0614290:intron 30.0%
GGTTGGAATTAAACTAAGAA+GGG - chr4_2:63276159-63276178 Msa0614290:intron 30.0%
AAAAACCAGTTAAAACCACA+TGG + chr4_2:63276226-63276245 None:intergenic 30.0%
!!! TGTGGTTTTAACTGGTTTTT+AGG - chr4_2:63276226-63276245 Msa0614290:intron 30.0%
ATATGTATTTCAGGGAGATT+AGG - chr4_2:63276518-63276537 Msa0614290:intron 30.0%
TATGAAAAGAATAGCTTCCT+TGG - chr4_2:63277093-63277112 Msa0614290:intron 30.0%
ACAAAAAGGATGGAATTCAA+AGG - chr4_2:63277116-63277135 Msa0614290:intron 30.0%
AGTTGAAAAACTTCAGTACT+AGG + chr4_2:63277166-63277185 None:intergenic 30.0%
! AATCTTTGTCTTTTGTCTTC+TGG - chr4_2:63277193-63277212 Msa0614290:intron 30.0%
TCTGGTAAAACAGTTTACTT+TGG - chr4_2:63277211-63277230 Msa0614290:intron 30.0%
! TCCTTCTTTGTTTAGTATCA+TGG - chr4_2:63277476-63277495 Msa0614290:CDS 30.0%
ACCATGATACTAAACAAAGA+AGG + chr4_2:63277480-63277499 None:intergenic 30.0%
TGCAAAATAGATAGACACTA+GGG + chr4_2:63277569-63277588 None:intergenic 30.0%
GATTATCAGAATTCACAATG+TGG + chr4_2:63277598-63277617 None:intergenic 30.0%
ATGGTTGGATACAAAAATGT+AGG + chr4_2:63277645-63277664 None:intergenic 30.0%
AGTTGACATAAAAACATGGT+TGG + chr4_2:63277660-63277679 None:intergenic 30.0%
TCAATGTTAGGATATTGAGA+TGG - chr4_2:63277914-63277933 Msa0614290:CDS 30.0%
GATATCAATTGCTTGTTCTA+TGG + chr4_2:63277964-63277983 None:intergenic 30.0%
ACATTGACATGAAACTTTGA+TGG - chr4_2:63278120-63278139 Msa0614290:intron 30.0%
CATTGACATGAAACTTTGAT+GGG - chr4_2:63278121-63278140 Msa0614290:intron 30.0%
ACATACAAGAAAAAACATGC+TGG - chr4_2:63278164-63278183 Msa0614290:intron 30.0%
ATCCAAATCATTAAAGACAG+TGG + chr4_2:63278303-63278322 None:intergenic 30.0%
!!! CTAATTTTGCATGTCACTTT+TGG - chr4_2:63278406-63278425 Msa0614290:intron 30.0%
TTTGAACGTGAAAGACTAAA+TGG - chr4_2:63278841-63278860 Msa0614290:intron 30.0%
ACTGAAATCATCAGCAAATA+TGG + chr4_2:63278916-63278935 None:intergenic 30.0%
! ATTGTCCCTGATTTTCTAAT+GGG - chr4_2:63279063-63279082 Msa0614290:intron 30.0%
GAAAGGCAATATAGAACATA+GGG + chr4_2:63279182-63279201 None:intergenic 30.0%
TGAAAGGCAATATAGAACAT+AGG + chr4_2:63279183-63279202 None:intergenic 30.0%
TGTTCTATATTGCCTTTCAT+AGG - chr4_2:63279184-63279203 Msa0614290:CDS 30.0%
! TTGAAAAGCATACCTATGAA+AGG + chr4_2:63279199-63279218 None:intergenic 30.0%
! TTTCATAGGTATGCTTTTCA+AGG - chr4_2:63279198-63279217 Msa0614290:CDS 30.0%
TCCTATAAGAATGAGTTTGA+AGG - chr4_2:63279222-63279241 Msa0614290:CDS 30.0%
TCCTTCAAACTCATTCTTAT+AGG + chr4_2:63279226-63279245 None:intergenic 30.0%
TTTGAAAGAGATGAAATTGG+TGG - chr4_2:63279252-63279271 Msa0614290:CDS 30.0%
TTGATATGAGTTACTCAAAG+TGG - chr4_2:63279337-63279356 Msa0614290:CDS 30.0%
TGATATGAGTTACTCAAAGT+GGG - chr4_2:63279338-63279357 Msa0614290:CDS 30.0%
GACATAAGTGACATAACAAT+AGG + chr4_2:63279447-63279466 None:intergenic 30.0%
! TGAGGGTTTTTACATGCATT+TGG + chr4_2:63275358-63275377 None:intergenic 35.0%
ATATAGACAGTTTGGCATGA+GGG + chr4_2:63275375-63275394 None:intergenic 35.0%
TATATAGACAGTTTGGCATG+AGG + chr4_2:63275376-63275395 None:intergenic 35.0%
ATTAGGCACAGATGAAAGAA+GGG + chr4_2:63275445-63275464 None:intergenic 35.0%
TATTAGGCACAGATGAAAGA+AGG + chr4_2:63275446-63275465 None:intergenic 35.0%
! GGAGCATCAAAAAAGATGAA+TGG - chr4_2:63275498-63275517 Msa0614290:CDS 35.0%
GCATCAAAAAAGATGAATGG+AGG - chr4_2:63275501-63275520 Msa0614290:CDS 35.0%
CGAAAGCAAATCAATTCTTC+AGG - chr4_2:63275596-63275615 Msa0614290:CDS 35.0%
!!! GTTTTAAAGTTCATGGCTGA+TGG - chr4_2:63275924-63275943 Msa0614290:CDS 35.0%
ATGTCAAAACTACTTCCATG+TGG - chr4_2:63276208-63276227 Msa0614290:intron 35.0%
!!! TACTTCCATGTGGTTTTAAC+TGG - chr4_2:63276218-63276237 Msa0614290:intron 35.0%
GTTCAAACACAAGACAATCA+GGG - chr4_2:63276540-63276559 Msa0614290:CDS 35.0%
TTCAAACACAAGACAATCAG+GGG - chr4_2:63276541-63276560 Msa0614290:CDS 35.0%
!!! TCAGGGGATATTTTGATCAA+TGG - chr4_2:63276557-63276576 Msa0614290:CDS 35.0%
!! AACAAACAAGCATTGGCTTA+TGG - chr4_2:63276581-63276600 Msa0614290:CDS 35.0%
ATAGTACACGGCTTCTTTAA+CGG + chr4_2:63276828-63276847 None:intergenic 35.0%
TGTGTCAGGTAATTGAAGTT+GGG + chr4_2:63276855-63276874 None:intergenic 35.0%
TTGTGTCAGGTAATTGAAGT+TGG + chr4_2:63276856-63276875 None:intergenic 35.0%
TCTTCATTAGACATTGTGTC+AGG + chr4_2:63276869-63276888 None:intergenic 35.0%
GATGCAATCAACACAAGAAT+TGG - chr4_2:63276935-63276954 Msa0614290:CDS 35.0%
CAATCAACACAAGAATTGGA+GGG - chr4_2:63276939-63276958 Msa0614290:CDS 35.0%
TCGTCAAGAAAAAGAAGTCT+AGG + chr4_2:63277034-63277053 None:intergenic 35.0%
AATAGCTTCCTTGGACAAAA+AGG - chr4_2:63277102-63277121 Msa0614290:intron 35.0%
! AATTCCATCCTTTTTGTCCA+AGG + chr4_2:63277113-63277132 None:intergenic 35.0%
!! TTGATGGATTGAGGCAATAA+TGG + chr4_2:63277143-63277162 None:intergenic 35.0%
! AAACTTCAGTACTAGGTTGA+TGG + chr4_2:63277159-63277178 None:intergenic 35.0%
!! ATGATCGGATGGATTTTGTA+GGG + chr4_2:63277378-63277397 None:intergenic 35.0%
!! AATGATCGGATGGATTTTGT+AGG + chr4_2:63277379-63277398 None:intergenic 35.0%
!! GTTTTAAGCAAATGATCGGA+TGG + chr4_2:63277389-63277408 None:intergenic 35.0%
! ATATTTCCGACTTGTATCGA+AGG + chr4_2:63277512-63277531 None:intergenic 35.0%
GTGCAAAATAGATAGACACT+AGG + chr4_2:63277570-63277589 None:intergenic 35.0%
ATGAAGAATATGAGCTCACA+AGG + chr4_2:63277986-63278005 None:intergenic 35.0%
!! GAAACTTTGATGGGTGTTTT+AGG - chr4_2:63278130-63278149 Msa0614290:intron 35.0%
!! TAAGAACTAAGCACTGATTG+AGG + chr4_2:63278193-63278212 None:intergenic 35.0%
TTCGTGATCTTGGCTATTAT+TGG - chr4_2:63278237-63278256 Msa0614290:intron 35.0%
CCAATGCAATATATATGCCA+AGG + chr4_2:63278268-63278287 None:intergenic 35.0%
CCTTGGCATATATATTGCAT+TGG - chr4_2:63278265-63278284 Msa0614290:intron 35.0%
AGCCACTGTCTTTAATGATT+TGG - chr4_2:63278298-63278317 Msa0614290:CDS 35.0%
TAAAAGTAACGGCTCAATTC+AGG - chr4_2:63278322-63278341 Msa0614290:CDS 35.0%
!!! CACTTTTGGTTTTCCTTTTC+AGG - chr4_2:63278420-63278439 Msa0614290:intron 35.0%
TTCCTAACTTTCATGACCAT+TGG - chr4_2:63278475-63278494 Msa0614290:intron 35.0%
ATTCTCGAAGTTGTAAGCAT+CGG - chr4_2:63278608-63278627 Msa0614290:intron 35.0%
GAAAGACTAAATGGACACTA+TGG - chr4_2:63278850-63278869 Msa0614290:intron 35.0%
GGTGTAACTGCATATGTAAT+TGG - chr4_2:63278871-63278890 Msa0614290:intron 35.0%
!! TCAAATCCTTTTTGAAGACC+TGG + chr4_2:63278967-63278986 None:intergenic 35.0%
! CATTGTCCCTGATTTTCTAA+TGG - chr4_2:63279062-63279081 Msa0614290:intron 35.0%
AATGGCTTAGGAAGATCATT+TGG + chr4_2:63279150-63279169 None:intergenic 35.0%
! ATGATCTTCCTAAGCCATTT+TGG - chr4_2:63279151-63279170 Msa0614290:intron 35.0%
! AACATAGGGTATCTCCAAAA+TGG + chr4_2:63279168-63279187 None:intergenic 35.0%
GGATCACTCAATTACATTAG+TGG - chr4_2:63279285-63279304 Msa0614290:CDS 35.0%
!! GTTGATCTTGGAGTATTGTT+GGG - chr4_2:63279360-63279379 Msa0614290:CDS 35.0%
AACATCTACATGTAAAGGAG+TGG + chr4_2:63279514-63279533 None:intergenic 35.0%
ATGAATGGAGGAGAAGAGAA+GGG - chr4_2:63275513-63275532 Msa0614290:CDS 40.0%
!! GTTACTGTTTCTGCTTCAAC+AGG - chr4_2:63275564-63275583 Msa0614290:CDS 40.0%
ATTATAGCCAAAAGCTGACC+TGG + chr4_2:63275642-63275661 None:intergenic 40.0%
!! AGGTCAGCTTTTGGCTATAA+TGG - chr4_2:63275641-63275660 Msa0614290:CDS 40.0%
!! GGTCAGCTTTTGGCTATAAT+GGG - chr4_2:63275642-63275661 Msa0614290:CDS 40.0%
! GTAGATTTTCCACAACCAGA+AGG + chr4_2:63275669-63275688 None:intergenic 40.0%
ACACTTCTTGATGCTTTAGC+AGG - chr4_2:63275687-63275706 Msa0614290:CDS 40.0%
ATGAAACGAAGCACAATCTG+TGG - chr4_2:63276391-63276410 Msa0614290:CDS 40.0%
GGTTCAAAGACTACATGCAT+TGG + chr4_2:63276475-63276494 None:intergenic 40.0%
GGTTCAAACACAAGACAATC+AGG - chr4_2:63276539-63276558 Msa0614290:intron 40.0%
CAATGGCAACAAACAAGCAT+TGG - chr4_2:63276574-63276593 Msa0614290:CDS 40.0%
AAGTTGGGCTGAATAGTACA+CGG + chr4_2:63276840-63276859 None:intergenic 40.0%
GCAATCAACACAAGAATTGG+AGG - chr4_2:63276938-63276957 Msa0614290:CDS 40.0%
TTTCTTGACGAACCAACTAG+TGG - chr4_2:63277043-63277062 Msa0614290:intron 40.0%
!! AGTACTAGGTTGATGGATTG+AGG + chr4_2:63277152-63277171 None:intergenic 40.0%
!! TGATCGGATGGATTTTGTAG+GGG + chr4_2:63277377-63277396 None:intergenic 40.0%
CAGTATCCTTCGATACAAGT+CGG - chr4_2:63277503-63277522 Msa0614290:CDS 40.0%
CATGTTCACGAAAGATCTTC+TGG + chr4_2:63278216-63278235 None:intergenic 40.0%
GTGAACATGTTTCGTGATCT+TGG - chr4_2:63278227-63278246 Msa0614290:intron 40.0%
!! GGTTTTCCTTTTCAGGATAG+AGG - chr4_2:63278427-63278446 Msa0614290:intron 40.0%
AGTGAACCTCTATCCTGAAA+AGG + chr4_2:63278436-63278455 None:intergenic 40.0%
CACCAATGGTCATGAAAGTT+AGG + chr4_2:63278480-63278499 None:intergenic 40.0%
CTAACTTTCATGACCATTGG+TGG - chr4_2:63278478-63278497 Msa0614290:intron 40.0%
ATAAGAAGGGAATCCACCAA+TGG + chr4_2:63278494-63278513 None:intergenic 40.0%
TCATGTCCTCCACATAAGAA+GGG + chr4_2:63278507-63278526 None:intergenic 40.0%
TTCATGTCCTCCACATAAGA+AGG + chr4_2:63278508-63278527 None:intergenic 40.0%
TTCTTATGTGGAGGACATGA+AGG - chr4_2:63278507-63278526 Msa0614290:intron 40.0%
CTGATGATTTCAGTCATTCC+TGG - chr4_2:63278922-63278941 Msa0614290:intron 40.0%
!! ATCCTTTTTGAAGACCTGGA+GGG + chr4_2:63278963-63278982 None:intergenic 40.0%
!! AATCCTTTTTGAAGACCTGG+AGG + chr4_2:63278964-63278983 None:intergenic 40.0%
ATGGGAATTATAACTGGTGC+TGG - chr4_2:63279081-63279100 Msa0614290:intron 40.0%
! ATAACTGGTGCTGGAATTCA+AGG - chr4_2:63279090-63279109 Msa0614290:intron 40.0%
CAAGGAATTATGATGTTGGC+TGG - chr4_2:63279108-63279127 Msa0614290:intron 40.0%
GAAAGAGATGAAATTGGTGG+TGG - chr4_2:63279255-63279274 Msa0614290:CDS 40.0%
!! TACTCAAAGTGGGTTGATCT+TGG - chr4_2:63279348-63279367 Msa0614290:CDS 40.0%
!! GGTTGATCTTGGAGTATTGT+TGG - chr4_2:63279359-63279378 Msa0614290:CDS 40.0%
!! AAGACTTGTCTTGTTTGCCT+AGG + chr4_2:63279477-63279496 None:intergenic 40.0%
TAGGCAAACAAGACAAGTCT+TGG - chr4_2:63279476-63279495 Msa0614290:five_prime_UTR 40.0%
CTCTTGCGCTTTCAATCTCT+AGG + chr4_2:63275470-63275489 None:intergenic 45.0%
! GATTGAAAGCGCAAGAGAAG+AGG - chr4_2:63275473-63275492 Msa0614290:CDS 45.0%
GATGAATGGAGGAGAAGAGA+AGG - chr4_2:63275512-63275531 Msa0614290:CDS 45.0%
TCAATTCTTCAGGGTCTGAC+TGG - chr4_2:63275606-63275625 Msa0614290:CDS 45.0%
!! TTGGCTATAATGGGTCCTTC+TGG - chr4_2:63275651-63275670 Msa0614290:CDS 45.0%
!! ATAATGGGTCCTTCTGGTTG+TGG - chr4_2:63275657-63275676 Msa0614290:CDS 45.0%
!! AGCATTGGCTTATGGAACCT+CGG - chr4_2:63276589-63276608 Msa0614290:CDS 45.0%
CACGGCTTCTTTAACGGTTA+AGG + chr4_2:63276822-63276841 None:intergenic 45.0%
TCAACACAAGAATTGGAGGG+TGG - chr4_2:63276942-63276961 Msa0614290:intron 45.0%
CAACACAAGAATTGGAGGGT+GGG - chr4_2:63276943-63276962 Msa0614290:intron 45.0%
AACACAAGAATTGGAGGGTG+GGG - chr4_2:63276944-63276963 Msa0614290:intron 45.0%
! TGGGGTGTTAAAGGCATAAG+TGG - chr4_2:63276962-63276981 Msa0614290:intron 45.0%
! GGGGTGTTAAAGGCATAAGT+GGG - chr4_2:63276963-63276982 Msa0614290:intron 45.0%
! GGGTGTTAAAGGCATAAGTG+GGG - chr4_2:63276964-63276983 Msa0614290:intron 45.0%
! GGTGTTAAAGGCATAAGTGG+GGG - chr4_2:63276965-63276984 Msa0614290:intron 45.0%
GCATAAGTGGGGGTCAAAAA+AGG - chr4_2:63276975-63276994 Msa0614290:intron 45.0%
GCACTATCAAGTCCACTAGT+TGG + chr4_2:63277058-63277077 None:intergenic 45.0%
GCTTCCTTGGACAAAAAGGA+TGG - chr4_2:63277106-63277125 Msa0614290:intron 45.0%
! GAGATGGATTTAGCAGAGAC+TGG - chr4_2:63277930-63277949 Msa0614290:CDS 45.0%
! GGCTATTATTGGTTACGCCT+TGG - chr4_2:63278248-63278267 Msa0614290:intron 45.0%
!! TGGTGGATTCCCTTCTTATG+TGG - chr4_2:63278495-63278514 Msa0614290:intron 45.0%
TGGATTCCCTTCTTATGTGG+AGG - chr4_2:63278498-63278517 Msa0614290:intron 45.0%
TAATGACGAACGTTCACCGA+GGG + chr4_2:63278705-63278724 None:intergenic 45.0%
ACCTGGAGGGTAATATGCTA+TGG + chr4_2:63278950-63278969 None:intergenic 45.0%
TACCCTCCAGGTCTTCAAAA+AGG - chr4_2:63278958-63278977 Msa0614290:intron 45.0%
! GGAATTATGATGTTGGCTGG+TGG - chr4_2:63279111-63279130 Msa0614290:intron 45.0%
GGGTATCTCCAAAATGGCTT+AGG + chr4_2:63279162-63279181 None:intergenic 45.0%
!! AGAGATGAAATTGGTGGTGG+TGG - chr4_2:63279258-63279277 Msa0614290:CDS 45.0%
ACATGTAAAGGAGTGGCACT+AGG + chr4_2:63279507-63279526 None:intergenic 45.0%
!! ATATTTATATACAAATTATT+GGG - chr4_2:63276354-63276373 Msa0614290:intron 5.0%
!!! AAATAATATCATATTTTAAT+TGG + chr4_2:63276496-63276515 None:intergenic 5.0%
! GAAAGCGCAAGAGAAGAGGT+AGG - chr4_2:63275477-63275496 Msa0614290:CDS 50.0%
! CTGACTGGTTATGCAAAGCC+AGG - chr4_2:63275621-63275640 Msa0614290:CDS 50.0%
! TGCAAAGCCAGGTCAGCTTT+TGG - chr4_2:63275632-63275651 Msa0614290:CDS 50.0%
! ATTGGAGGGTGGGGTGTTAA+AGG - chr4_2:63276953-63276972 Msa0614290:intron 50.0%
! CTTCTGCTGCATCTGAGGTT+AGG - chr4_2:63277239-63277258 Msa0614290:intron 50.0%
! GGATTTTGTAGGGGAGGACA+AGG + chr4_2:63277368-63277387 None:intergenic 50.0%
!! TCGGATGGATTTTGTAGGGG+AGG + chr4_2:63277374-63277393 None:intergenic 50.0%
CTAATGACGAACGTTCACCG+AGG + chr4_2:63278706-63278725 None:intergenic 50.0%
GGGTAATATGCTATGGCTCC+AGG + chr4_2:63278943-63278962 None:intergenic 50.0%
GCCATAGCATATTACCCTCC+AGG - chr4_2:63278946-63278965 Msa0614290:intron 50.0%
!! GATGAAATTGGTGGTGGTGG+TGG - chr4_2:63279261-63279280 Msa0614290:CDS 50.0%
! CACTTATGTCGGTGTCTCCT+AGG - chr4_2:63279457-63279476 Msa0614290:five_prime_UTR 50.0%
CGAAGCACAATCTGTGGCAG+CGG - chr4_2:63276397-63276416 Msa0614290:CDS 55.0%
GAAGCACAATCTGTGGCAGC+GGG - chr4_2:63276398-63276417 Msa0614290:CDS 55.0%
AAGCACAATCTGTGGCAGCG+GGG - chr4_2:63276399-63276418 Msa0614290:CDS 55.0%
ACCTGCTTCTGCTGCATCTG+AGG - chr4_2:63277234-63277253 Msa0614290:intron 55.0%
ACCTCAGATGCAGCAGAAGC+AGG + chr4_2:63277238-63277257 None:intergenic 55.0%
!! GAAATTGGTGGTGGTGGTGG+TGG - chr4_2:63279264-63279283 Msa0614290:CDS 55.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 63275306 63279577 63275306 ID=Msa0614290;Name=Msa0614290
chr4_2 mRNA 63275306 63279577 63275306 ID=Msa0614290-mRNA-1;Parent=Msa0614290;Name=Msa0614290-mRNA-1;_AED=0.09;_eAED=0.09;_QI=129|1|1|1|1|1|8|38|678
chr4_2 exon 63275306 63276045 63275306 ID=Msa0614290-mRNA-1:exon:17613;Parent=Msa0614290-mRNA-1
chr4_2 exon 63276355 63276441 63276355 ID=Msa0614290-mRNA-1:exon:17612;Parent=Msa0614290-mRNA-1
chr4_2 exon 63276540 63276731 63276540 ID=Msa0614290-mRNA-1:exon:17611;Parent=Msa0614290-mRNA-1
chr4_2 exon 63276816 63276959 63276816 ID=Msa0614290-mRNA-1:exon:17610;Parent=Msa0614290-mRNA-1
chr4_2 exon 63277453 63277539 63277453 ID=Msa0614290-mRNA-1:exon:17609;Parent=Msa0614290-mRNA-1
chr4_2 exon 63277628 63278098 63277628 ID=Msa0614290-mRNA-1:exon:17608;Parent=Msa0614290-mRNA-1
chr4_2 exon 63278273 63278352 63278273 ID=Msa0614290-mRNA-1:exon:17607;Parent=Msa0614290-mRNA-1
chr4_2 exon 63279175 63279577 63279175 ID=Msa0614290-mRNA-1:exon:17606;Parent=Msa0614290-mRNA-1
chr4_2 five_prime_UTR 63279449 63279577 63279449 ID=Msa0614290-mRNA-1:five_prime_utr;Parent=Msa0614290-mRNA-1
chr4_2 CDS 63279175 63279448 63279175 ID=Msa0614290-mRNA-1:cds;Parent=Msa0614290-mRNA-1
chr4_2 CDS 63278273 63278352 63278273 ID=Msa0614290-mRNA-1:cds;Parent=Msa0614290-mRNA-1
chr4_2 CDS 63277628 63278098 63277628 ID=Msa0614290-mRNA-1:cds;Parent=Msa0614290-mRNA-1
chr4_2 CDS 63277453 63277539 63277453 ID=Msa0614290-mRNA-1:cds;Parent=Msa0614290-mRNA-1
chr4_2 CDS 63276816 63276959 63276816 ID=Msa0614290-mRNA-1:cds;Parent=Msa0614290-mRNA-1
chr4_2 CDS 63276540 63276731 63276540 ID=Msa0614290-mRNA-1:cds;Parent=Msa0614290-mRNA-1
chr4_2 CDS 63276355 63276441 63276355 ID=Msa0614290-mRNA-1:cds;Parent=Msa0614290-mRNA-1
chr4_2 CDS 63275344 63276045 63275344 ID=Msa0614290-mRNA-1:cds;Parent=Msa0614290-mRNA-1
chr4_2 three_prime_UTR 63275306 63275343 63275306 ID=Msa0614290-mRNA-1:three_prime_utr;Parent=Msa0614290-mRNA-1
Gene Sequence

>Msa0614290

ATGGCTTCCCTTCTTTCATCTGTGCCTAATATCCTAGAGATTGAAAGCGCAAGAGAAGAGGTAGGAGCATCAAAAAAGATGAATGGAGGAGAAGAGAAGGGTATTTGTTTAACTTGGAAAGATCTATGGGTTACTGTTTCTGCTTCAACAGGAAAAACCAACGAAAGCAAATCAATTCTTCAGGGTCTGACTGGTTATGCAAAGCCAGGTCAGCTTTTGGCTATAATGGGTCCTTCTGGTTGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGGAGATTAGGTTCAAACACAAGACAATCAGGGGATATTTTGATCAATGGCAACAAACAAGCATTGGCTTATGGAACCTCGGCATATGTCACACAAGATGATACTTTATTAACAACCTTAACCGTTAAAGAAGCCGTGTACTATTCAGCCCAACTTCAATTACCTGACACAATGTCTAATGAAGAGAAAAAAGAAAGAGCTGATTTTACAATAAGAGAAATGGGTCTGCAAGATGCAATCAACACAAGAATTGGAGGGTGGGGTGTTAAAGGCATAAGTGGGGGTCAAAAAAGGAGAGTTAGCATTTGCATTGAGATTCTTACACGTCCTAGACTTCTTTTTCTTGACGAACCAACTAGTGGACTTGATAGTGCAGCTTCTTACTATGTTATGAAAAGAATAGCTTCCTTGGACAAAAAGGATGGAATTCAAAGGACCATTATTGCCTCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTTCATAATCTTTGTCTTTTGTCTTCTGGTAAAACAGTTTACTTTGGACCTGCTTCTGCTGCATCTGAGTTTTTTGCTTTGAACGGATTTCCTTGTCCTCCCCTACAAAATCCATCCGATCATTTGCTTAAAACTATAAACAAGGATTTTGATCAGGATATTGAGATGGATTTAGCAGAGACTGGAACAATTTCCATAGAACAAGCAATTGATATCCTTGTGAGCTCATATTCTTCATCCGAAAGAAACCAAGAAATTAAAAATGAAGTATCAATATTGTCTATAGTATTGTCTTTAAAGGACAATAACTCAACATACAAGAAAAAACATGCTGGCTTCCTCAATCAGTGCTTAGTTCTTACCAGAAGATCTTTCGTGAACATGTTTCGTGATCTTGGCTATTATTGGTTACGCCTTGGCATATATATTGCATTGGCTATAAGTTTAGCCACTGTCTTTAATGATTTGGATAAAAGTAACGGCTCAATTCAGGATAGAGGTTCACTTCTTATGTTTGTGTTTTCATTCCTAACTTTCATGACCATTGGTGGATTCCCTTCTTATGTGGAGGACATGAAGGTATTTGAACGTGAAAGACTAAATGGACACTATGGTGTAACTGCATATGTAATTGGAAACACACTTTCAGCTATTCCATATTTGCTGATGATTTCAGTCATTCCTGGAGCCATAGCATATTACCCTCCAGGTCTTCAAAAAGGATTTGAGCACTTCATATATTTTATCTGTGCTCTATTTTCTTGTCTAATGTTAGTGGAGAGTCTTATGATGATAGTTGCTAGCATTGTCCCTGATTTTCTAATGGGAATTATAACTGGTGCTGGAATTCAAGGAATTATGATGTTGGCTGGTGGATTCTTTAGATTACCAAATGATCTTCCTAAGCCATTTTGGAGATACCCTATGTTCTATATTGCCTTTCATAGGTATGCTTTTCAAGGATCCTATAAGAATGAGTTTGAAGGACTAAAATTTGAAAGAGATGAAATTGGTGGTGGTGGTGGTGGATCACTCAATTACATTAGTGGTGAAGAGATTCTAAGAAATAAATTTCAAGTTGATATGAGTTACTCAAAGTGGGTTGATCTTGGAGTATTGTTGGGTATGATTGTTCTATATCGACTTGTGTTTTTGATTATTATCAAAATTACTGAGAAGCTTAAACCTATTGTTATGTCACTTATGTCGGTGTCTCCTAGGCAAACAAGACAAGTCTTGGAGAATCCTAGTGCCACTCCTTTACATGTAGATGTTGTATAA
Protein sequence

>Msa0614290

MASLLSSVPNILEIESAREEVGASKKMNGGEEKGICLTWKDLWVTVSASTGKTNESKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTRQSGDILINGNKQALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSNEEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSSGKTVYFGPASAASEFFALNGFPCPPLQNPSDHLLKTINKDFDQDIEMDLAETGTISIEQAIDILVSSYSSSERNQEIKNEVSILSIVLSLKDNNSTYKKKHAGFLNQCLVLTRRSFVNMFRDLGYYWLRLGIYIALAISLATVFNDLDKSNGSIQDRGSLLMFVFSFLTFMTIGGFPSYVEDMKVFERERLNGHYGVTAYVIGNTLSAIPYLLMISVIPGAIAYYPPGLQKGFEHFIYFICALFSCLMLVESLMMIVASIVPDFLMGIITGAGIQGIMMLAGGFFRLPNDLPKPFWRYPMFYIAFHRYAFQGSYKNEFEGLKFERDEIGGGGGGSLNYISGEEILRNKFQVDMSYSKWVDLGVLLGMIVLYRLVFLIIIKITEKLKPIVMSLMSVSPRQTRQVLENPSATPLHVDVV*