AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0638820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638820 MtrunA17_Chr4g0050291 96.988 664 19 1 12 675 3 665 0.0 1334
Msa0638820 MtrunA17_Chr4g0050251 71.758 694 170 7 1 675 1 687 0.0 999
Msa0638820 MtrunA17_Chr4g0050261 71.243 692 148 7 25 671 41 726 0.0 985
Msa0638820 MtrunA17_Chr4g0026731 70.252 595 155 4 92 665 12 605 0.0 863
Msa0638820 MtrunA17_Chr4g0050221 60.353 623 233 8 30 650 6 616 0.0 753
Msa0638820 MtrunA17_Chr4g0050201 59.165 551 209 6 99 645 2 540 0.0 676
Msa0638820 MtrunA17_Chr6g0477811 52.174 644 285 6 37 669 47 678 0.0 652
Msa0638820 MtrunA17_Chr4g0039261 44.611 668 337 9 26 671 20 676 0.0 576
Msa0638820 MtrunA17_Chr4g0039251 45.562 676 337 9 10 666 39 702 0.0 560
Msa0638820 MtrunA17_Chr4g0039231 42.038 628 292 7 101 666 2 619 7.72e-161 477
Msa0638820 MtrunA17_Chr2g0327241 37.296 614 358 9 34 637 104 700 3.58e-129 398
Msa0638820 MtrunA17_Chr1g0176451 33.094 556 325 15 49 582 17 547 6.54e-78 259
Msa0638820 MtrunA17_Chr8g0384391 29.244 595 394 11 57 638 54 634 2.22e-76 257
Msa0638820 MtrunA17_Chr1g0213091 31.115 556 339 11 54 579 117 658 1.05e-75 258
Msa0638820 MtrunA17_Chr7g0263351 29.412 544 360 8 52 580 120 654 1.79e-75 257
Msa0638820 MtrunA17_Chr1g0208391 30.226 665 404 18 30 673 66 691 7.66e-75 255
Msa0638820 MtrunA17_Chr3g0130331 29.916 595 388 14 57 638 56 634 3.45e-74 251
Msa0638820 MtrunA17_Chr2g0316301 29.932 588 376 13 56 637 70 627 4.69e-74 251
Msa0638820 MtrunA17_Chr7g0267971 32.428 552 333 13 53 580 154 689 1.00e-73 252
Msa0638820 MtrunA17_Chr4g0065231 28.523 589 384 11 58 637 74 634 1.70e-71 244
Msa0638820 MtrunA17_Chr1g0176441 30.541 573 356 14 35 582 147 702 5.48e-70 242
Msa0638820 MtrunA17_Chr1g0200651 33.333 492 287 17 20 491 51 521 2.56e-63 222
Msa0638820 MtrunA17_Chr1g0198931 29.846 583 357 17 33 589 72 628 2.04e-61 217
Msa0638820 MtrunA17_Chr5g0408061 29.006 624 390 17 35 638 45 635 8.30e-61 214
Msa0638820 MtrunA17_Chr1g0202431 27.349 596 387 14 59 644 50 609 6.19e-60 212
Msa0638820 MtrunA17_Chr8g0359931 30.478 502 317 9 55 546 62 541 1.22e-57 206
Msa0638820 MtrunA17_Chr5g0446901 30.651 522 328 13 44 546 94 600 1.41e-56 202
Msa0638820 MtrunA17_Chr2g0318061 39.100 289 164 5 55 340 27 306 2.12e-55 193
Msa0638820 MtrunA17_Chr3g0102731 32.473 465 285 11 59 510 98 546 4.35e-54 195
Msa0638820 MtrunA17_Chr8g0393191 41.107 253 142 4 54 304 64 311 1.48e-51 191
Msa0638820 MtrunA17_Chr8g0393191 23.796 353 231 10 310 642 479 813 3.52e-18 89.0
Msa0638820 MtrunA17_Chr2g0331081 28.759 532 336 15 51 567 883 1386 1.12e-50 191
Msa0638820 MtrunA17_Chr2g0331081 25.276 633 393 16 58 637 178 783 4.02e-43 167
Msa0638820 MtrunA17_Chr2g0332241 25.151 664 431 19 10 639 791 1422 2.14e-49 187
Msa0638820 MtrunA17_Chr2g0332241 24.032 620 405 16 58 633 166 763 1.63e-38 153
Msa0638820 MtrunA17_Chr7g0262251 25.452 609 384 15 15 579 771 1353 4.50e-49 186
Msa0638820 MtrunA17_Chr7g0262251 25.743 606 418 12 52 637 168 761 1.58e-40 160
Msa0638820 MtrunA17_Chr3g0104621 26.119 536 351 13 51 567 756 1265 1.12e-48 184
Msa0638820 MtrunA17_Chr3g0104621 27.040 625 389 14 55 635 52 653 2.08e-44 171
Msa0638820 MtrunA17_Chr7g0261971 26.220 656 420 17 14 638 819 1441 1.24e-48 184
Msa0638820 MtrunA17_Chr7g0261971 24.880 623 408 16 58 637 157 762 3.53e-39 155
Msa0638820 MtrunA17_Chr2g0332221 25.710 599 395 16 59 639 855 1421 1.45e-48 184
Msa0638820 MtrunA17_Chr2g0332221 24.355 620 403 15 58 633 166 763 7.93e-40 157
Msa0638820 MtrunA17_Chr4g0003981 25.624 601 390 16 59 638 866 1430 5.95e-48 182
Msa0638820 MtrunA17_Chr4g0003981 23.794 622 416 13 58 637 172 777 6.52e-35 142
Msa0638820 MtrunA17_Chr7g0262241 25.913 575 373 13 14 559 823 1373 6.11e-48 182
Msa0638820 MtrunA17_Chr7g0262241 24.601 626 406 15 58 637 161 766 7.26e-40 157
Msa0638820 MtrunA17_Chr0c20g0493841 27.187 640 391 15 46 635 154 768 8.72e-48 182
Msa0638820 MtrunA17_Chr0c20g0493841 26.742 531 338 13 53 564 852 1350 1.12e-42 166
Msa0638820 MtrunA17_Chr7g0265981 26.446 605 403 15 49 638 873 1450 1.19e-47 181
Msa0638820 MtrunA17_Chr7g0265981 24.638 621 413 10 59 637 184 791 9.39e-43 166
Msa0638820 MtrunA17_Chr8g0340651 28.571 539 328 15 51 567 897 1400 1.99e-47 181
Msa0638820 MtrunA17_Chr8g0340651 25.348 647 410 16 58 660 177 794 4.05e-43 167
Msa0638820 MtrunA17_Chr2g0332211 25.041 607 405 16 51 639 931 1505 3.09e-47 180
Msa0638820 MtrunA17_Chr2g0332211 24.277 622 401 16 58 633 247 844 2.12e-38 153
Msa0638820 MtrunA17_Chr5g0411621 35.691 311 165 8 12 314 25 308 4.12e-47 177
Msa0638820 MtrunA17_Chr5g0411621 25.180 278 199 4 365 642 455 723 1.10e-22 103
Msa0638820 MtrunA17_Chr7g0265991 26.923 624 387 19 49 638 49 637 2.29e-46 174
Msa0638820 MtrunA17_Chr1g0171351 26.990 515 341 11 59 559 894 1387 8.08e-46 176
Msa0638820 MtrunA17_Chr1g0171351 24.640 625 404 16 59 635 176 781 5.07e-38 152
Msa0638820 MtrunA17_Chr3g0138261 25.467 589 403 12 49 624 860 1425 5.55e-45 173
Msa0638820 MtrunA17_Chr3g0138261 25.241 622 391 17 58 629 165 762 7.41e-39 154
Msa0638820 MtrunA17_Chr7g0262231 25.862 522 354 9 51 559 875 1376 8.03e-45 173
Msa0638820 MtrunA17_Chr7g0262231 24.359 624 410 14 58 637 161 766 2.10e-40 159
Msa0638820 MtrunA17_Chr7g0262261 26.803 638 424 17 28 638 760 1381 8.61e-45 173
Msa0638820 MtrunA17_Chr7g0262261 24.719 623 417 14 52 635 126 735 3.15e-41 162
Msa0638820 MtrunA17_Chr4g0062871 26.748 658 409 19 58 664 149 784 2.05e-44 171
Msa0638820 MtrunA17_Chr4g0062871 25.862 522 354 11 51 559 836 1337 2.18e-39 156
Msa0638820 MtrunA17_Chr7g0261951 25.382 654 428 15 14 638 823 1445 2.14e-44 171
Msa0638820 MtrunA17_Chr7g0261951 24.719 623 409 15 58 637 161 766 2.62e-40 159
Msa0638820 MtrunA17_Chr7g0266001 26.129 620 401 13 59 635 63 668 8.45e-44 167
Msa0638820 MtrunA17_Chr4g0003971 25.914 602 387 16 59 638 825 1389 9.08e-44 169
Msa0638820 MtrunA17_Chr4g0003971 25.278 629 398 18 58 637 160 765 3.10e-40 159
Msa0638820 MtrunA17_Chr7g0262221 25.818 581 367 15 18 559 803 1358 1.00e-43 169
Msa0638820 MtrunA17_Chr7g0262221 24.960 629 408 15 58 635 162 777 4.22e-38 152
Msa0638820 MtrunA17_Chr1g0148841 25.758 528 347 13 51 559 869 1370 1.35e-43 169
Msa0638820 MtrunA17_Chr1g0148841 26.521 641 375 20 59 638 166 771 5.36e-42 164
Msa0638820 MtrunA17_Chr1g0148811 24.613 646 422 19 19 636 803 1411 1.47e-43 169
Msa0638820 MtrunA17_Chr1g0148811 25.879 626 396 16 59 637 154 758 1.67e-34 141
Msa0638820 MtrunA17_Chr7g0265971 25.879 626 394 17 49 638 865 1456 2.02e-43 169
Msa0638820 MtrunA17_Chr7g0265971 25.164 608 400 11 59 624 178 772 1.03e-42 166
Msa0638820 MtrunA17_Chr1g0199471 39.163 263 145 7 37 295 501 752 4.44e-42 164
Msa0638820 MtrunA17_Chr5g0429871 25.391 575 372 13 99 633 18 575 1.01e-41 163
Msa0638820 MtrunA17_Chr5g0429871 27.609 460 275 11 59 492 667 1094 5.86e-41 161
Msa0638820 MtrunA17_Chr1g0198291 26.938 516 340 15 59 559 894 1387 1.18e-41 163
Msa0638820 MtrunA17_Chr1g0198291 24.281 626 409 14 59 637 189 796 1.46e-34 141
Msa0638820 MtrunA17_Chr4g0069211 27.229 628 381 18 53 635 160 756 2.10e-41 162
Msa0638820 MtrunA17_Chr4g0069211 35.922 206 126 3 53 256 840 1041 6.11e-28 120
Msa0638820 MtrunA17_Chr7g0264441 38.934 244 142 6 55 295 275 514 2.22e-40 158
Msa0638820 MtrunA17_Chr7g0265961 25.437 629 382 19 59 635 182 775 3.66e-40 159
Msa0638820 MtrunA17_Chr7g0265961 24.587 606 396 17 49 638 821 1381 3.46e-35 143
Msa0638820 MtrunA17_Chr7g0261981 25.518 627 399 19 58 637 161 766 2.14e-39 156
Msa0638820 MtrunA17_Chr7g0261981 24.161 596 381 16 59 638 861 1401 1.26e-36 147
Msa0638820 MtrunA17_Chr1g0180971 36.641 262 153 6 37 295 397 648 4.12e-39 154
Msa0638820 MtrunA17_Chr4g0004021 27.610 431 273 12 59 473 863 1270 1.51e-36 147
Msa0638820 MtrunA17_Chr4g0004021 23.259 632 407 14 58 637 170 775 8.91e-35 142
Msa0638820 MtrunA17_Chr4g0028621 33.969 262 160 6 37 295 491 742 1.16e-33 138
Msa0638820 MtrunA17_Chr4g0050241 32.013 303 70 7 359 661 9 175 1.67e-32 124
Msa0638820 MtrunA17_Chr3g0093331 35.238 210 130 3 79 285 18 224 2.92e-32 125
Msa0638820 MtrunA17_Chr6g0472481 31.858 226 135 4 59 269 13 234 8.96e-29 115
Msa0638820 MtrunA17_Chr7g0262321 26.108 609 359 26 36 607 540 1094 1.20e-28 122
Msa0638820 MtrunA17_Chr7g0262321 26.689 296 209 4 159 451 18 308 8.93e-19 91.3
Msa0638820 MtrunA17_Chr4g0026741 61.446 83 20 3 12 94 34 104 5.43e-22 92.4
Msa0638820 MtrunA17_Chr4g0050191 58.571 70 24 2 24 92 27 92 1.10e-15 73.6
Msa0638820 MtrunA17_Chr7g0249091 28.571 266 150 9 24 268 73 319 1.61e-14 75.5
Msa0638820 MtrunA17_Chr4g0047831 41.860 86 47 1 175 260 1 83 3.07e-14 68.9
Msa0638820 MtrunA17_Chr4g0061601 30.415 217 130 10 59 268 404 606 3.60e-14 75.9
Msa0638820 MtrunA17_Chr4g0050231 72.549 51 8 1 41 91 4 48 4.03e-14 67.4
Msa0638820 MtrunA17_Chr4g0041871 29.224 219 129 8 59 268 1023 1224 6.43e-14 75.9
Msa0638820 MtrunA17_Chr4g0041871 27.645 293 173 13 3 275 295 568 1.13e-13 75.1
Msa0638820 MtrunA17_Chr7g0227391 29.648 199 116 7 59 247 442 626 1.42e-13 74.3
Msa0638820 MtrunA17_Chr1g0178481 32.710 214 120 11 59 263 396 594 4.98e-13 72.4
Msa0638820 MtrunA17_Chr3g0132711 30.000 190 112 5 60 243 210 384 1.01e-12 71.2
Msa0638820 MtrunA17_Chr7g0257321 48.214 56 24 1 37 92 3 53 1.99e-12 62.8
Msa0638820 MtrunA17_Chr3g0093041 29.609 179 105 5 71 243 207 370 2.09e-12 70.5
Msa0638820 MtrunA17_Chr6g0481921 25.478 314 204 10 59 359 288 584 2.57e-12 70.5
Msa0638820 MtrunA17_Chr7g0257341 33.163 196 110 7 24 214 541 720 3.95e-12 70.1
Msa0638820 MtrunA17_Chr7g0257341 26.733 202 126 7 49 243 1468 1654 2.25e-11 67.8
Msa0638820 MtrunA17_Chr1g0193991 31.282 195 116 10 59 247 406 588 4.65e-12 69.7
Msa0638820 MtrunA17_Chr1g0194031 29.439 214 129 11 59 262 401 602 5.66e-12 69.3
Msa0638820 MtrunA17_Chr5g0433051 28.261 230 129 8 57 272 479 686 5.73e-12 68.9
Msa0638820 MtrunA17_Chr7g0264631 33.862 189 101 10 68 247 1107 1280 7.14e-12 69.3
Msa0638820 MtrunA17_Chr4g0039221 53.333 60 26 2 35 94 7 64 7.96e-12 61.2
Msa0638820 MtrunA17_Chr6g0452081 33.333 186 102 9 70 247 51 222 9.59e-12 65.5
Msa0638820 MtrunA17_Chr3g0119381 34.000 200 108 11 57 247 414 598 1.12e-11 68.6
Msa0638820 MtrunA17_Chr2g0285301 28.497 193 124 5 59 247 381 563 1.64e-11 67.8
Msa0638820 MtrunA17_Chr5g0433071 27.354 223 140 6 57 272 481 688 1.76e-11 67.4
Msa0638820 MtrunA17_Chr1g0180601 32.836 201 105 11 59 247 1072 1254 2.05e-11 67.8
Msa0638820 MtrunA17_Chr6g0451911 27.953 254 151 11 70 309 389 624 2.37e-11 67.4
Msa0638820 MtrunA17_Chr3g0123411 27.434 226 130 9 59 271 922 1126 3.41e-11 67.0
Msa0638820 MtrunA17_Chr6g0452171 30.088 226 126 9 59 271 1037 1243 5.44e-11 66.2
Msa0638820 MtrunA17_Chr4g0047821 58.696 46 19 0 54 99 45 90 6.01e-11 59.3
Msa0638820 MtrunA17_Chr6g0452141 31.313 198 114 9 59 247 1034 1218 6.28e-11 66.2
Msa0638820 MtrunA17_Chr6g0452141 31.188 202 119 10 70 262 390 580 7.52e-11 65.9
Msa0638820 MtrunA17_Chr6g0463151 25.882 340 203 17 8 341 411 707 6.36e-11 65.9
Msa0638820 MtrunA17_Chr6g0451881 30.102 196 119 5 59 247 1024 1208 6.38e-11 65.9
Msa0638820 MtrunA17_Chr6g0452041 30.102 196 119 5 59 247 1036 1220 6.56e-11 65.9
Msa0638820 MtrunA17_Chr6g0452111 33.333 186 102 9 70 247 396 567 8.70e-11 65.5
Msa0638820 MtrunA17_Chr6g0452111 29.596 223 131 8 59 271 1035 1241 8.92e-11 65.5
Msa0638820 MtrunA17_Chr6g0452061 31.364 220 131 8 59 271 546 752 9.06e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638820 AT1G17840.1 52.950 644 279 6 37 669 50 680 0.0 635
Msa0638820 AT3G21090.1 46.131 672 327 12 12 666 1 654 0.0 583
Msa0638820 AT1G51500.1 44.444 648 334 9 33 666 20 655 0.0 543
Msa0638820 AT1G51460.1 41.780 663 340 10 32 666 5 649 2.45e-174 513
Msa0638820 AT2G28070.2 36.260 615 365 9 34 638 111 708 1.67e-129 399
Msa0638820 AT2G28070.1 36.260 615 365 9 34 638 111 708 1.67e-129 399
Msa0638820 AT3G55110.1 30.926 540 358 8 49 580 81 613 7.05e-79 266
Msa0638820 AT2G01320.8 30.870 609 374 18 11 602 44 622 4.21e-78 262
Msa0638820 AT2G01320.5 30.870 609 374 18 11 602 44 622 4.21e-78 262
Msa0638820 AT3G55130.1 30.435 552 348 9 52 580 92 630 7.11e-78 263
Msa0638820 AT2G13610.1 29.244 595 396 12 54 638 57 636 8.17e-78 261
Msa0638820 AT2G37360.1 31.066 544 343 9 56 580 130 660 1.39e-77 263
Msa0638820 AT2G01320.1 30.984 610 374 18 11 603 44 623 2.57e-77 262
Msa0638820 AT2G01320.4 30.984 610 374 18 11 603 44 623 2.57e-77 262
Msa0638820 AT2G01320.2 30.984 610 374 18 11 603 44 623 2.70e-77 262
Msa0638820 AT2G01320.3 30.984 610 374 18 11 603 44 623 3.27e-77 261
Msa0638820 AT3G53510.1 32.965 543 325 10 56 580 123 644 2.12e-76 259
Msa0638820 AT3G55100.1 30.970 536 341 11 57 580 49 567 1.30e-75 256
Msa0638820 AT3G55100.2 30.970 536 341 11 57 580 49 567 1.30e-75 256
Msa0638820 AT5G13580.1 30.514 603 367 11 1 579 57 631 5.47e-75 256
Msa0638820 AT5G19410.1 27.863 585 371 14 59 632 66 610 7.65e-72 245
Msa0638820 AT5G19410.2 27.863 585 371 14 59 632 75 619 9.82e-72 244
Msa0638820 AT3G55090.1 29.917 605 366 14 4 579 65 640 1.05e-71 247
Msa0638820 AT5G06530.2 30.964 591 357 16 20 580 139 708 2.26e-70 244
Msa0638820 AT5G06530.1 30.964 591 357 16 20 580 139 708 2.26e-70 244
Msa0638820 AT5G06530.3 32.276 536 327 13 35 546 155 678 3.06e-70 242
Msa0638820 AT2G01320.7 32.383 491 293 14 11 485 44 511 5.11e-68 232
Msa0638820 AT2G01320.6 32.383 491 293 14 11 485 44 511 5.11e-68 232
Msa0638820 AT1G53270.1 28.843 631 385 13 20 637 2 581 1.49e-67 232
Msa0638820 AT2G39350.1 29.891 552 348 11 55 579 105 644 1.17e-66 233
Msa0638820 AT4G25750.1 28.596 591 361 18 59 638 30 570 1.82e-66 229
Msa0638820 AT5G52860.1 28.331 593 370 15 53 638 38 582 8.45e-65 225
Msa0638820 AT5G06530.4 32.525 495 298 13 76 546 1 483 2.24e-64 221
Msa0638820 AT1G31770.1 29.202 589 380 15 54 632 76 637 1.52e-63 223
Msa0638820 AT4G27420.1 31.337 501 319 9 55 546 62 546 4.58e-61 216
Msa0638820 AT1G71960.1 33.978 465 254 18 52 490 76 513 8.24e-60 213
Msa0638820 AT3G25620.2 29.110 584 362 19 33 589 64 622 1.93e-59 212
Msa0638820 AT2G29940.1 27.018 570 366 11 31 573 813 1359 9.74e-55 203
Msa0638820 AT2G29940.1 25.549 638 400 16 58 644 174 787 1.61e-47 181
Msa0638820 AT4G15233.7 26.142 635 425 13 42 647 133 752 1.52e-54 202
Msa0638820 AT4G15233.7 26.587 583 377 16 23 585 768 1319 1.25e-47 182
Msa0638820 AT4G15233.5 26.209 641 430 14 42 654 71 696 6.61e-54 201
Msa0638820 AT4G15233.5 26.766 538 346 15 68 585 685 1194 2.66e-44 171
Msa0638820 AT4G15233.4 26.209 641 430 14 42 654 71 696 6.61e-54 201
Msa0638820 AT4G15233.4 26.766 538 346 15 68 585 685 1194 2.66e-44 171
Msa0638820 AT4G15233.2 25.421 653 425 13 42 647 133 770 1.15e-53 200
Msa0638820 AT4G15233.2 26.516 577 369 16 23 577 786 1329 6.69e-46 176
Msa0638820 AT4G15233.1 25.421 653 425 13 42 647 133 770 1.35e-53 200
Msa0638820 AT4G15233.1 26.587 583 377 16 23 585 786 1337 1.36e-47 182
Msa0638820 AT4G15233.3 25.421 653 425 13 42 647 71 708 1.50e-53 199
Msa0638820 AT4G15233.3 26.587 583 377 16 23 585 724 1275 1.27e-47 182
Msa0638820 AT4G15233.6 25.421 653 425 13 42 647 71 708 1.50e-53 199
Msa0638820 AT4G15233.6 26.587 583 377 16 23 585 724 1275 1.27e-47 182
Msa0638820 AT3G13220.1 29.590 561 341 18 57 591 104 636 4.45e-53 194
Msa0638820 AT4G15215.11 26.398 644 407 15 42 637 131 755 1.50e-52 197
Msa0638820 AT4G15215.11 26.049 572 374 14 33 585 801 1342 9.69e-48 182
Msa0638820 AT4G15215.9 26.398 644 407 15 42 637 128 752 1.60e-52 196
Msa0638820 AT4G15215.9 26.049 572 374 14 33 585 798 1339 1.04e-47 182
Msa0638820 AT4G15215.4 26.398 644 407 15 42 637 128 752 1.60e-52 196
Msa0638820 AT4G15215.4 26.049 572 374 14 33 585 798 1339 1.04e-47 182
Msa0638820 AT4G15215.5 26.398 644 407 15 42 637 128 752 1.60e-52 196
Msa0638820 AT4G15215.5 26.049 572 374 14 33 585 798 1339 1.04e-47 182
Msa0638820 AT4G15215.3 26.398 644 407 15 42 637 128 752 1.60e-52 196
Msa0638820 AT4G15215.3 26.049 572 374 14 33 585 798 1339 1.04e-47 182
Msa0638820 AT4G15215.2 26.398 644 407 15 42 637 128 752 1.60e-52 196
Msa0638820 AT4G15215.2 26.049 572 374 14 33 585 798 1339 1.04e-47 182
Msa0638820 AT4G15215.8 26.708 644 398 16 42 637 128 745 1.73e-52 196
Msa0638820 AT4G15215.8 26.049 572 374 14 33 585 791 1332 8.96e-48 182
Msa0638820 AT4G15215.10 26.708 644 398 16 42 637 128 745 1.73e-52 196
Msa0638820 AT4G15215.10 26.049 572 374 14 33 585 791 1332 8.96e-48 182
Msa0638820 AT4G15215.6 26.708 644 398 16 42 637 128 745 1.73e-52 196
Msa0638820 AT4G15215.6 26.049 572 374 14 33 585 791 1332 8.96e-48 182
Msa0638820 AT4G15215.7 26.708 644 398 16 42 637 128 745 1.73e-52 196
Msa0638820 AT4G15215.7 26.049 572 374 14 33 585 791 1332 8.96e-48 182
Msa0638820 AT4G15215.1 26.708 644 398 16 42 637 131 748 2.22e-52 196
Msa0638820 AT4G15215.1 26.049 572 374 14 33 585 794 1335 1.07e-47 182
Msa0638820 AT4G15236.1 25.077 650 431 11 42 647 131 768 2.75e-51 193
Msa0638820 AT4G15236.1 26.689 592 379 17 16 585 777 1335 8.64e-49 185
Msa0638820 AT1G59870.1 27.632 532 342 12 51 567 886 1389 2.99e-51 192
Msa0638820 AT1G59870.1 25.079 630 400 16 58 637 185 792 4.97e-41 162
Msa0638820 AT2G37280.2 26.415 689 429 20 14 647 104 769 2.37e-50 190
Msa0638820 AT2G37280.2 27.639 521 330 13 33 530 809 1305 8.62e-46 176
Msa0638820 AT2G37280.1 26.415 689 429 20 14 647 104 769 3.41e-50 189
Msa0638820 AT2G37280.1 27.170 530 342 14 54 567 834 1335 1.95e-46 178
Msa0638820 AT3G25620.1 36.196 326 188 9 33 343 64 384 4.77e-50 181
Msa0638820 AT3G53480.1 26.852 648 379 21 46 633 175 787 1.33e-49 187
Msa0638820 AT3G53480.1 25.284 617 388 17 15 590 816 1400 7.48e-45 173
Msa0638820 AT1G15210.1 26.960 523 341 12 59 567 867 1362 1.50e-49 187
Msa0638820 AT1G15210.1 24.961 633 408 16 58 643 183 795 5.66e-40 158
Msa0638820 AT4G15233.8 25.268 653 417 14 42 647 133 761 1.83e-49 187
Msa0638820 AT4G15233.8 26.587 583 377 16 23 585 777 1328 1.73e-47 181
Msa0638820 AT4G15230.2 25.312 640 415 14 42 635 134 756 8.35e-49 185
Msa0638820 AT4G15230.2 26.277 548 351 16 33 556 804 1322 3.66e-45 174
Msa0638820 AT4G15230.3 25.234 642 413 14 42 635 134 756 1.29e-48 185
Msa0638820 AT4G15230.3 25.265 566 374 15 33 579 804 1339 3.63e-46 177
Msa0638820 AT4G15230.1 25.234 642 413 14 42 635 134 756 1.29e-48 185
Msa0638820 AT4G15230.1 25.265 566 374 15 33 579 804 1339 3.63e-46 177
Msa0638820 AT4G15230.4 25.234 642 413 14 42 635 55 677 1.31e-48 184
Msa0638820 AT4G15230.4 25.265 566 374 15 33 579 725 1260 4.15e-46 177
Msa0638820 AT3G16340.2 26.642 533 346 13 51 567 828 1331 1.97e-48 184
Msa0638820 AT3G16340.2 25.000 636 410 17 58 647 161 775 1.50e-36 148
Msa0638820 AT3G16340.1 26.642 533 346 13 51 567 833 1336 2.01e-48 184
Msa0638820 AT3G16340.1 24.882 635 417 15 58 647 161 780 9.71e-38 151
Msa0638820 AT1G15520.1 26.904 591 379 17 13 574 796 1362 2.68e-47 181
Msa0638820 AT1G15520.1 24.880 623 408 13 58 637 168 773 8.66e-44 170
Msa0638820 AT2G37280.3 27.027 555 357 15 33 567 838 1364 2.16e-46 178
Msa0638820 AT2G37280.3 25.348 718 429 21 14 647 104 798 3.23e-45 174
Msa0638820 AT2G37280.4 27.170 530 342 14 54 567 676 1177 2.60e-46 177
Msa0638820 AT2G37280.4 26.316 627 389 17 71 647 8 611 2.85e-45 174
Msa0638820 AT1G15520.2 24.880 623 408 13 58 637 168 773 1.35e-43 169
Msa0638820 AT1G15520.2 28.571 483 293 16 13 467 796 1254 2.88e-38 153
Msa0638820 AT1G53390.1 36.981 265 154 6 37 298 507 761 2.47e-42 165
Msa0638820 AT2G36380.1 25.755 629 396 14 59 637 188 795 1.09e-41 164
Msa0638820 AT2G36380.1 25.142 529 353 13 49 559 869 1372 4.69e-38 152
Msa0638820 AT2G37010.2 36.585 287 161 8 37 320 484 752 2.85e-41 162
Msa0638820 AT2G37010.1 36.585 287 161 8 37 320 484 752 2.85e-41 162
Msa0638820 AT2G26910.1 25.314 636 403 16 51 637 143 755 5.89e-41 161
Msa0638820 AT2G26910.1 24.390 533 367 9 51 566 837 1350 4.99e-40 159
Msa0638820 AT3G30842.1 27.647 510 312 15 44 524 826 1307 7.93e-41 161
Msa0638820 AT3G30842.1 25.627 558 348 15 58 564 160 701 1.21e-38 154
Msa0638820 AT1G66950.1 25.321 624 405 12 59 637 190 797 1.90e-40 160
Msa0638820 AT1G66950.1 24.294 531 355 13 49 559 870 1373 4.06e-37 149
Msa0638820 AT5G60740.1 33.588 262 161 6 37 295 499 750 6.58e-33 136
Msa0638820 AT3G21080.1 36.170 141 78 4 510 645 106 239 1.42e-16 80.5
Msa0638820 AT5G61700.2 28.218 202 126 5 54 248 610 799 3.07e-14 77.0
Msa0638820 AT5G61700.4 28.218 202 126 5 54 248 610 799 3.07e-14 77.0
Msa0638820 AT3G47730.1 30.890 191 109 6 60 243 547 721 1.47e-13 74.7
Msa0638820 AT5G61700.1 27.919 197 119 6 54 243 610 790 1.85e-13 74.7
Msa0638820 AT1G70610.2 27.059 255 154 9 53 295 285 519 2.02e-13 73.9
Msa0638820 AT1G27940.1 30.412 194 119 6 59 247 388 570 2.50e-13 74.3
Msa0638820 AT1G27940.1 29.167 216 133 8 59 268 1021 1222 2.43e-11 67.8
Msa0638820 AT1G27940.2 30.412 194 119 6 59 247 174 356 2.80e-13 73.9
Msa0638820 AT1G27940.2 29.167 216 133 8 59 268 807 1008 1.98e-11 68.2
Msa0638820 AT5G39040.1 30.638 235 137 11 56 282 410 626 3.24e-13 73.6
Msa0638820 AT1G70610.1 27.059 255 154 9 53 295 466 700 3.70e-13 73.2
Msa0638820 AT4G33460.1 28.279 244 151 7 35 277 38 258 3.80e-13 70.9
Msa0638820 AT1G28010.1 30.412 194 119 7 59 247 389 571 5.55e-13 73.2
Msa0638820 AT1G28010.1 31.336 217 129 9 58 268 1022 1224 9.32e-11 65.9
Msa0638820 AT5G61690.2 30.366 191 110 7 60 243 548 722 8.55e-13 72.4
Msa0638820 AT5G61730.1 30.890 191 109 7 60 243 539 713 1.89e-12 71.2
Msa0638820 AT5G61730.2 30.890 191 109 7 60 243 549 723 1.98e-12 71.2
Msa0638820 AT3G47750.1 25.269 186 124 5 54 234 630 805 2.36e-12 70.9
Msa0638820 AT2G41700.2 32.308 195 113 7 24 214 466 645 2.91e-12 70.9
Msa0638820 AT2G41700.2 26.633 199 124 6 52 243 1424 1607 4.35e-11 67.0
Msa0638820 AT3G47780.1 25.128 195 127 6 54 243 628 808 3.38e-12 70.5
Msa0638820 AT3G47790.2 25.405 185 125 4 54 234 482 657 3.70e-12 70.1
Msa0638820 AT2G41700.1 32.308 195 113 7 24 214 536 715 3.94e-12 70.5
Msa0638820 AT2G41700.1 26.633 199 124 6 52 243 1466 1649 4.83e-11 67.0
Msa0638820 AT2G47000.4 30.698 215 124 11 40 247 387 583 4.07e-12 70.5
Msa0638820 AT3G47790.3 25.405 185 125 4 54 234 601 776 4.48e-12 70.1
Msa0638820 AT2G47000.2 30.698 215 124 11 40 247 387 583 4.96e-12 70.1
Msa0638820 AT2G47000.3 30.698 215 124 11 40 247 387 583 5.43e-12 69.7
Msa0638820 AT2G47000.7 30.698 215 124 11 40 247 387 583 5.43e-12 69.7
Msa0638820 AT5G61740.3 25.000 236 153 8 13 243 427 643 6.00e-12 69.7
Msa0638820 AT4G28620.1 28.636 220 141 6 57 272 452 659 6.06e-12 69.3
Msa0638820 AT3G47790.1 25.773 194 127 5 54 243 601 781 6.33e-12 69.7
Msa0638820 AT2G47000.6 30.698 215 124 11 40 247 387 583 7.87e-12 69.3
Msa0638820 AT2G47000.5 30.698 215 124 11 40 247 387 583 7.87e-12 69.3
Msa0638820 AT2G47000.1 30.698 215 124 11 40 247 387 583 7.87e-12 69.3
Msa0638820 AT3G28390.1 32.178 202 117 10 70 262 375 565 8.46e-12 69.3
Msa0638820 AT3G28390.1 29.545 220 135 6 59 271 997 1203 1.17e-11 68.9
Msa0638820 AT5G61740.2 26.190 210 135 7 13 217 532 726 1.03e-11 68.9
Msa0638820 AT5G61740.1 26.190 210 135 7 13 217 566 760 1.16e-11 68.6
Msa0638820 AT1G10680.2 31.351 185 107 9 70 247 389 560 1.43e-11 68.6
Msa0638820 AT1G10680.1 31.351 185 107 9 70 247 389 560 1.45e-11 68.6
Msa0638820 AT3G28360.1 30.198 202 121 9 70 262 374 564 1.55e-11 68.6
Msa0638820 AT5G61690.1 29.670 182 100 7 71 243 559 721 1.89e-11 68.2
Msa0638820 AT3G28380.1 32.020 203 118 10 69 262 386 577 1.91e-11 68.2
Msa0638820 AT3G47770.1 26.404 178 115 5 54 224 599 767 2.47e-11 67.8
Msa0638820 AT3G47770.2 26.404 178 115 5 54 224 625 793 3.05e-11 67.4
Msa0638820 AT4G25960.1 29.808 208 120 10 70 268 429 619 3.79e-11 67.4
Msa0638820 AT3G28415.2 29.245 212 124 8 70 271 1012 1207 3.81e-11 67.0
Msa0638820 AT3G47760.1 22.222 261 170 10 54 308 589 822 3.83e-11 67.0
Msa0638820 AT3G28415.1 29.245 212 124 8 70 271 1004 1199 3.94e-11 67.0
Msa0638820 AT3G47760.3 22.605 261 169 10 54 308 629 862 4.35e-11 67.0
Msa0638820 AT3G47760.2 22.605 261 169 10 54 308 599 832 4.85e-11 66.6
Msa0638820 AT1G02530.2 29.091 220 138 9 57 271 383 589 6.11e-11 66.2
Msa0638820 AT3G28345.1 31.188 202 119 9 70 262 387 577 7.91e-11 66.2
Msa0638820 AT1G02530.1 29.091 220 138 9 57 271 383 589 8.90e-11 65.9

Find 134 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTAACTTGGAAAGATTTA+TGG 0.118017 4_3:-34417869 Msa0638820:CDS
GTCTATAGTATTGTCTTTAA+AGG 0.148699 4_3:-34415359 Msa0638820:intron
ATGATCTTCCTAATCCATTT+TGG 0.156981 4_3:-34414268 Msa0638820:CDS
GATATCAATTGCTTGTTCTA+TGG 0.227852 4_3:+34415444 None:intergenic
ATTGGAGGGTGGGGTGTTAA+AGG 0.234899 4_3:-34416452 Msa0638820:CDS
ACTGAAATCATCAGCAAATA+TGG 0.242245 4_3:+34414506 None:intergenic
AACATAGGGTATTTCCAAAA+TGG 0.259735 4_3:+34414254 None:intergenic
AGCCACTGTCTTTAATGATT+TGG 0.262428 4_3:-34415106 Msa0638820:CDS
ATTATTCCCATTAGAAAATC+AGG 0.278005 4_3:+34414350 None:intergenic
TTTAATTTCTTGGTTTCTTT+CGG 0.280423 4_3:+34415399 None:intergenic
TACCCTCCAGGTCTTCAAAA+AGG 0.282844 4_3:-34414461 Msa0638820:CDS
CTTTCAATCTCTAGGATATT+AGG 0.283672 4_3:+34417951 None:intergenic
TTTGAACGTGAAAGACTAAA+TGG 0.294897 4_3:-34414578 Msa0638820:CDS
AATAGCTTCCTTGGACAAAA+AGG 0.296864 4_3:-34416303 Msa0638820:CDS
TGCAAAGCCTGGTCAGCTTT+TGG 0.303335 4_3:-34417778 Msa0638820:CDS
AAGACAAAAGACAAAGATTA+TGG 0.307904 4_3:+34416216 None:intergenic
TGAAAGCAAATCAATTCTTC+AGG 0.309362 4_3:-34417814 Msa0638820:CDS
CTGATGATTTCAGTCATTCC+TGG 0.309905 4_3:-34414497 Msa0638820:CDS
CATGTTCACAAAAGATCTTC+TGG 0.312879 4_3:+34415191 None:intergenic
CTTAACTTGGAAAGATTTAT+GGG 0.314150 4_3:-34417868 Msa0638820:CDS
TTCGTGATCTTGGCTATTAT+TGG 0.317963 4_3:-34415167 Msa0638820:CDS
CACTGCTTCTTTAACGGTTA+AGG 0.320519 4_3:+34416586 None:intergenic
TTGGCTATAATGGGTCCTTC+TGG 0.326290 4_3:-34417759 Msa0638820:CDS
AAGAATTGATTTGCTTTCAT+TGG 0.326703 4_3:+34417818 None:intergenic
TTTCTAATGGGAATAATAAC+TGG 0.328894 4_3:-34414344 Msa0638820:CDS
TAAAAGTAATGGCTCAATTC+AGG 0.332362 4_3:-34415082 Msa0638820:intron
ATAGTACACTGCTTCTTTAA+CGG 0.351217 4_3:+34416580 None:intergenic
TAGGCAAACAAGACAATTCT+TGG 0.351823 4_3:-34413952 Msa0638820:CDS
AGAAGGGAGTTTGCTTAACT+TGG 0.354423 4_3:-34417881 Msa0638820:CDS
GGGTATTTCCAAAATGGATT+AGG 0.357240 4_3:+34414260 None:intergenic
AAATTTGAAAGAGATGAAAT+TGG 0.358441 4_3:-34414170 Msa0638820:CDS
TACTCAAAGTGGGTTGATCT+TGG 0.362481 4_3:-34414080 Msa0638820:CDS
AACAAACAAGCATTGGCTTA+TGG 0.366572 4_3:-34416823 Msa0638820:CDS
TGTTCTATATTGCCTTTCAT+AGG 0.369421 4_3:-34414235 Msa0638820:CDS
GATGCAATCAACACAAGAAT+TGG 0.372547 4_3:-34416470 Msa0638820:CDS
GGTTCAAACACAAGACAATC+AGG 0.375821 4_3:-34416865 Msa0638820:CDS
TGGGGTGTTAAAGGCATAAG+TGG 0.376232 4_3:-34416443 Msa0638820:CDS
AAACTTCAGTACTAGGTTGA+TGG 0.382630 4_3:+34416249 None:intergenic
ATATGTATTTCAGGGAGATT+AGG 0.390555 4_3:-34416886 Msa0638820:intron
GGTGTTACGGCATATGTAAT+TGG 0.394392 4_3:-34414548 Msa0638820:CDS
CACCAATGGTCATGAAAGTT+AGG 0.401646 4_3:+34414934 None:intergenic
ATAACTGGTGCTGGAATTCA+AGG 0.403511 4_3:-34414329 Msa0638820:CDS
GTGAACATGTTTCGTGATCT+TGG 0.409054 4_3:-34415177 Msa0638820:CDS
TATGAAAAGAATAGCTTCCT+TGG 0.410861 4_3:-34416312 Msa0638820:CDS
TGGTGGATTCCCTTCTTATG+TGG 0.415254 4_3:-34414916 Msa0638820:CDS
AGTCGAATATATAGACAGTT+TGG 0.415658 4_3:+34418030 None:intergenic
GTGACTGTTTCTGCTTCAAC+AGG 0.427001 4_3:-34417846 Msa0638820:CDS
GGCTATTATTGGTTACGCCT+TGG 0.429860 4_3:-34415156 Msa0638820:CDS
AAAGAAGTCTTGGACGTGTT+AGG 0.439769 4_3:+34416384 None:intergenic
CACTTATGTCGGTGTCTCCT+AGG 0.440631 4_3:-34413971 Msa0638820:CDS
GTTGATCTTGGAATATTGTT+GGG 0.450271 4_3:-34414068 Msa0638820:CDS
GGGGTGTTAAAGGCATAAGT+GGG 0.451027 4_3:-34416442 Msa0638820:CDS
TCAGGCAAAACAGTTTACTT+TGG 0.455818 4_3:-34416194 Msa0638820:CDS
TTGATGGATTGAGGCAATAA+TGG 0.456241 4_3:+34416265 None:intergenic
ATGGGAATAATAACTGGTGC+TGG 0.457311 4_3:-34414338 Msa0638820:CDS
GAAAGACTAAATGGACACTA+TGG 0.458475 4_3:-34414569 Msa0638820:CDS
TTCCTAACTTTCATGACCAT+TGG 0.458620 4_3:-34414936 Msa0638820:CDS
AATGATTTGGATAAAAGTAA+TGG 0.458739 4_3:-34415093 Msa0638820:CDS
GGTTGATCTTGGAATATTGT+TGG 0.459097 4_3:-34414069 Msa0638820:CDS
AAATGGATTAGGAAGATCAT+TGG 0.460933 4_3:+34414271 None:intergenic
TTGTGTCAGGTAATTGAAGT+TGG 0.471985 4_3:+34416552 None:intergenic
TCTTCATTAGACATTGTGTC+AGG 0.473825 4_3:+34416539 None:intergenic
TCAATTCTTCAGGGTCTGAC+TGG 0.475591 4_3:-34417804 Msa0638820:CDS
GAGATGGATTTAGCAGAGAC+TGG 0.477488 4_3:-34415475 Msa0638820:CDS
CTAACTTTCATGACCATTGG+TGG 0.478663 4_3:-34414933 Msa0638820:CDS
TTCATGTCCTCCACATAAGA+AGG 0.479736 4_3:+34414906 None:intergenic
ATAATGGGTCCTTCTGGTTG+TGG 0.481002 4_3:-34417753 Msa0638820:CDS
GATGAATGGAGGAGAAGAGA+AGG 0.482193 4_3:-34417898 Msa0638820:CDS
GACATAAGTGACATAACAAT+AGG 0.486627 4_3:+34413984 None:intergenic
ACCTCAGATGCAACAGAAGC+AGG 0.491002 4_3:+34416170 None:intergenic
ACCTGCTTCTGTTGCATCTG+AGG 0.494598 4_3:-34416171 Msa0638820:intron
ACACTTCTTGATGCTTTAGC+AGG 0.497837 4_3:-34417723 Msa0638820:intron
AGTACTAGGTTGATGGATTG+AGG 0.499081 4_3:+34416256 None:intergenic
CAAGGGATTATGATGTTGGC+AGG 0.499670 4_3:-34414311 Msa0638820:CDS
TGAAAGGCAATATAGAACAT+AGG 0.502086 4_3:+34414239 None:intergenic
TATTAGGCACAGATAAAAGA+AGG 0.502223 4_3:+34417967 None:intergenic
GAAAGCAAATCAATTCTTCA+GGG 0.502763 4_3:-34417813 Msa0638820:CDS
AATGGATTAGGAAGATCATT+GGG 0.503000 4_3:+34414272 None:intergenic
AAATGGACACTATGGTGTTA+CGG 0.505004 4_3:-34414561 Msa0638820:CDS
GGATCACTCAATTACATTAG+TGG 0.505948 4_3:-34414143 Msa0638820:CDS
TTCTTATGTGGAGGACATGA+AGG 0.508636 4_3:-34414904 Msa0638820:intron
AAGAATTGTCTTGTTTGCCT+AGG 0.509069 4_3:+34413954 None:intergenic
GCCATAGCATATTACCCTCC+AGG 0.509466 4_3:-34414473 Msa0638820:CDS
AATTCAAGGGATTATGATGT+TGG 0.510525 4_3:-34414315 Msa0638820:CDS
GGGTAATATGCTATGGCTCC+AGG 0.511427 4_3:+34414479 None:intergenic
CTCTTGCGCTTTCAATCTCT+AGG 0.511830 4_3:+34417943 None:intergenic
AACACAAGAATTGGAGGGTG+GGG 0.512629 4_3:-34416461 Msa0638820:CDS
GAAAGGCAATATAGAACATA+GGG 0.518508 4_3:+34414240 None:intergenic
ATGAATGGAGGAGAAGAGAA+GGG 0.524895 4_3:-34417897 Msa0638820:CDS
GAAAGAGATGAAATTGGTGG+TGG 0.530992 4_3:-34414164 Msa0638820:CDS
TGGATTCCCTTCTTATGTGG+AGG 0.531042 4_3:-34414913 Msa0638820:CDS
CAATGGCAACAAACAAGCAT+TGG 0.531389 4_3:-34416830 Msa0638820:CDS
GATTGAAAGCGCAAGAGAAG+AGG 0.532796 4_3:-34417937 Msa0638820:CDS
TTGATATGAGTTACTCAAAG+TGG 0.535183 4_3:-34414091 Msa0638820:CDS
TCTTATAAGAATGAGTTTGA+AGG 0.538328 4_3:-34414197 Msa0638820:CDS
TATACAACATCTATATGTAA+AGG 0.538931 4_3:+34413912 None:intergenic
ACCTGGAGGGTAATATGCTA+TGG 0.542119 4_3:+34414472 None:intergenic
CTGACTGGTTATGCAAAGCC+TGG 0.543693 4_3:-34417789 Msa0638820:CDS
TATTGTTATGTCACTTATGT+CGG 0.544402 4_3:-34413982 Msa0638820:CDS
GCACTATCAAGTCCACTAGT+TGG 0.553890 4_3:+34416350 None:intergenic
CCTTGGCATATATATTGCGT+TGG 0.554763 4_3:-34415139 Msa0638820:CDS
ATATAGACAGTTTGGCATGA+GGG 0.558443 4_3:+34418038 None:intergenic
GCAATCAACACAAGAATTGG+AGG 0.560697 4_3:-34416467 Msa0638820:CDS
ATTATAGCCAAAAGCTGACC+AGG 0.561158 4_3:+34417771 None:intergenic
TGTGTCAGGTAATTGAAGTT+GGG 0.561591 4_3:+34416553 None:intergenic
ATCCAAATCATTAAAGACAG+TGG 0.564200 4_3:+34415104 None:intergenic
CAACACAAGAATTGGAGGGT+GGG 0.564826 4_3:-34416462 Msa0638820:CDS
TTTCTTGATGAACCAACTAG+TGG 0.565982 4_3:-34416362 Msa0638820:CDS
ATATGTAAAGGAGTGGCACT+AGG 0.573329 4_3:+34413924 None:intergenic
TTGAAAAGCATACCTATGAA+AGG 0.573338 4_3:+34414223 None:intergenic
TGATATGAGTTACTCAAAGT+GGG 0.574550 4_3:-34414090 Msa0638820:CDS
TTATTCCCATTAGAAAATCA+GGG 0.576168 4_3:+34414351 None:intergenic
GGGTGTTAAAGGCATAAGTG+GGG 0.578959 4_3:-34416441 Msa0638820:CDS
TTTGAAAGAGATGAAATTGG+TGG 0.584768 4_3:-34414167 Msa0638820:CDS
GAAAGCGCAAGAGAAGAGGT+AGG 0.592493 4_3:-34417933 Msa0638820:CDS
TATATAGACAGTTTGGCATG+AGG 0.598734 4_3:+34418037 None:intergenic
TCAATGTTAGGATATTGAGA+TGG 0.603713 4_3:-34415491 Msa0638820:intron
GTTCAAACACAAGACAATCA+GGG 0.607925 4_3:-34416864 Msa0638820:CDS
TTTGCTTAAAACTATAAACA+AGG 0.608099 4_3:-34416008 Msa0638820:CDS
AACATCTATATGTAAAGGAG+TGG 0.624574 4_3:+34413917 None:intergenic
CCAACGCAATATATATGCCA+AGG 0.625218 4_3:+34415139 None:intergenic
ATGAAGAATATGAGCTCACA+AGG 0.626092 4_3:+34415422 None:intergenic
GGGATTATGATGTTGGCAGG+TGG 0.630683 4_3:-34414308 Msa0638820:CDS
TGAGAACTAAGCACTGATTG+AGG 0.631489 4_3:+34415214 None:intergenic
TTCAAACACAAGACAATCAG+GGG 0.633055 4_3:-34416863 Msa0638820:CDS
TCATGTCCTCCACATAAGAA+GGG 0.633774 4_3:+34414907 None:intergenic
TCAACACAAGAATTGGAGGG+TGG 0.634185 4_3:-34416463 Msa0638820:CDS
AGCATTGGCTTATGGAACCT+CGG 0.634970 4_3:-34416815 Msa0638820:intron
ATTCTTATATGTTCACAACA+TGG 0.654855 4_3:-34417994 Msa0638820:exon
ATTAGGCACAGATAAAAGAA+GGG 0.655682 4_3:+34417968 None:intergenic
TAACTGGTGCTGGAATTCAA+GGG 0.666097 4_3:-34414328 Msa0638820:CDS
CAATCAACACAAGAATTGGA+GGG 0.667741 4_3:-34416466 Msa0638820:CDS
ATAAGAAGGGAATCCACCAA+TGG 0.674842 4_3:+34414920 None:intergenic
GGTGTTAAAGGCATAAGTGG+GGG 0.724955 4_3:-34416440 Msa0638820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATATAATATTTTAAT+TGG + chr4_3:34415073-34415092 None:intergenic 0.0%
!! GATATTTATATACAAATTAT+TGG - chr4_3:34414930-34414949 Msa0638820:CDS 10.0%
!!! ATTATTTTTATATGTATTTC+AGG - chr4_3:34415086-34415105 Msa0638820:CDS 10.0%
!!! TTATTTTTATATGTATTTCA+GGG - chr4_3:34415087-34415106 Msa0638820:CDS 10.0%
!! TAAAATATTAATTGAAAGAA+TGG + chr4_3:34415329-34415348 None:intergenic 10.0%
!! TATATAATTGAAAATTAACA+TGG + chr4_3:34415853-34415872 None:intergenic 10.0%
!!! TTGGATATTTTTTTATTGAT+TGG - chr4_3:34414540-34414559 Msa0638820:CDS 15.0%
!!! TTACAAATTGTTTTTATTGA+AGG + chr4_3:34415211-34415230 None:intergenic 15.0%
!! ATATCAATTGGAATAATTTA+TGG + chr4_3:34415253-34415272 None:intergenic 15.0%
!! GATTAAATATACATATCAAT+TGG + chr4_3:34415265-34415284 None:intergenic 15.0%
!! AAACAGAATTAATTACTAAA+TGG + chr4_3:34415886-34415905 None:intergenic 15.0%
!!! ATACTTCATTTTTAATTTCT+TGG + chr4_3:34416595-34416614 None:intergenic 15.0%
!!! CACTAAATTATTGTTTTATT+CGG - chr4_3:34417342-34417361 Msa0638820:intron 15.0%
!! ATATTGTTGAAATAGTATGT+TGG + chr4_3:34414364-34414383 None:intergenic 20.0%
!! GCAAATATATTAATATGCTT+AGG + chr4_3:34414430-34414449 None:intergenic 20.0%
!!! ATGGTTTCTATTTCATTTTT+TGG - chr4_3:34414521-34414540 Msa0638820:CDS 20.0%
!!! AATTTGGTTTTAAACTAAGA+AGG - chr4_3:34414732-34414751 Msa0638820:intron 20.0%
!!! ATTTGGTTTTAAACTAAGAA+GGG - chr4_3:34414733-34414752 Msa0638820:intron 20.0%
!!! TGTGTTTTTAATTCTTAAAC+AGG - chr4_3:34414830-34414849 Msa0638820:intron 20.0%
!! TATTATTTAATGTGTGTACA+TGG + chr4_3:34414904-34414923 None:intergenic 20.0%
!! TTTATATACAAATTATTGGG+TGG - chr4_3:34414934-34414953 Msa0638820:CDS 20.0%
!! TTATATACAAATTATTGGGT+GGG - chr4_3:34414935-34414954 Msa0638820:CDS 20.0%
!!! TTTAGATTTTATATATACCG+AGG + chr4_3:34415186-34415205 None:intergenic 20.0%
!!! TAATATTTTAATGTGATCAC+AGG - chr4_3:34415339-34415358 Msa0638820:intron 20.0%
!!! TGATTTTACAATAAGAGAAA+TGG - chr4_3:34415480-34415499 Msa0638820:CDS 20.0%
!!! GATTTTACAATAAGAGAAAT+GGG - chr4_3:34415481-34415500 Msa0638820:CDS 20.0%
!!! TATAGTTTTAAGCAAATGAT+CGG + chr4_3:34415969-34415988 None:intergenic 20.0%
!! TTTGCTTAAAACTATAAACA+AGG - chr4_3:34415973-34415992 Msa0638820:intron 20.0%
!! GTTGAATCTTGAATTATTTA+AGG - chr4_3:34416297-34416316 Msa0638820:CDS 20.0%
!! TTGAAATATGTTTCAATGTT+AGG - chr4_3:34416478-34416497 Msa0638820:CDS 20.0%
!!! TTTAATTTCTTGGTTTCTTT+CGG + chr4_3:34416585-34416604 None:intergenic 20.0%
!!! TAAATTTAGCTCAAATTTAG+AGG + chr4_3:34416651-34416670 None:intergenic 20.0%
!!! AATGATTTGGATAAAAGTAA+TGG - chr4_3:34416888-34416907 Msa0638820:intron 20.0%
!! GCAAATATATATTGAATGAA+TGG - chr4_3:34417139-34417158 Msa0638820:intron 20.0%
!!! CATATGCTATTAATTTGTAT+AGG - chr4_3:34417378-34417397 Msa0638820:intron 20.0%
!! AAATTTGAAAGAGATGAAAT+TGG - chr4_3:34417811-34417830 Msa0638820:CDS 20.0%
!! TATACAACATCTATATGTAA+AGG + chr4_3:34418072-34418091 None:intergenic 20.0%
!!! GTACATTTAATTTTGTTTTG+TGG - chr4_3:34418096-34418115 Msa0638820:five_prime_UTR 20.0%
! ATTCTTATATGTTCACAACA+TGG - chr4_3:34413987-34414006 Msa0638820:CDS 25.0%
!! CTTAACTTGGAAAGATTTAT+GGG - chr4_3:34414113-34414132 Msa0638820:CDS 25.0%
!!! AAGAATTGATTTGCTTTCAT+TGG + chr4_3:34414166-34414185 None:intergenic 25.0%
!! ATTTTGTGTATTCTTTCTCA+AGG - chr4_3:34414396-34414415 Msa0638820:CDS 25.0%
!!! AACCTTATGTTTTAAAGTTC+AGG - chr4_3:34414493-34414512 Msa0638820:CDS 25.0%
!!! ACCTTATGTTTTAAAGTTCA+GGG - chr4_3:34414494-34414513 Msa0638820:CDS 25.0%
! GAAAAACATGTGTTAATCAA+AGG + chr4_3:34414579-34414598 None:intergenic 25.0%
!! TTGATTAACACATGTTTTTC+TGG - chr4_3:34414579-34414598 Msa0638820:CDS 25.0%
! TGACAAAATTCAAATCTCTT+CGG - chr4_3:34414656-34414675 Msa0638820:intron 25.0%
! GCTACATATTACTAGTAATT+TGG - chr4_3:34414716-34414735 Msa0638820:intron 25.0%
!!! GTTTTTAATTCTTAAACAGG+AGG - chr4_3:34414833-34414852 Msa0638820:intron 25.0%
! AAGACAAAAGACAAAGATTA+TGG + chr4_3:34415768-34415787 None:intergenic 25.0%
! TTCAAAGCAAAAAACTACAT+TGG + chr4_3:34415914-34415933 None:intergenic 25.0%
!!! ATGTAGTTTTTTGCTTTGAA+CGG - chr4_3:34415914-34415933 Msa0638820:intron 25.0%
!!! TATAAACAAGGATTTTGATC+AGG - chr4_3:34415985-34416004 Msa0638820:intron 25.0%
! ACAAAGTTGACATAAAAACA+TGG + chr4_3:34416240-34416259 None:intergenic 25.0%
! GTCTATAGTATTGTCTTTAA+AGG - chr4_3:34416622-34416641 Msa0638820:CDS 25.0%
! ATATTGACATGAAACTTTGA+TGG - chr4_3:34416697-34416716 Msa0638820:intron 25.0%
! TATTGACATGAAACTTTGAT+GGG - chr4_3:34416698-34416717 Msa0638820:intron 25.0%
! AGGTCAGTTAATGTAATATA+AGG + chr4_3:34416937-34416956 None:intergenic 25.0%
!! AGTTCATAACTTTTGTGAAT+TGG - chr4_3:34417200-34417219 Msa0638820:intron 25.0%
!!! TTGTTTTATTCGGTCTTTTA+TGG - chr4_3:34417352-34417371 Msa0638820:intron 25.0%
!! ATTTTCTTGTCTAATGTTAG+TGG - chr4_3:34417576-34417595 Msa0638820:intron 25.0%
! TTATTCCCATTAGAAAATCA+GGG + chr4_3:34417633-34417652 None:intergenic 25.0%
! ATTATTCCCATTAGAAAATC+AGG + chr4_3:34417634-34417653 None:intergenic 25.0%
! TTTCTAATGGGAATAATAAC+TGG - chr4_3:34417637-34417656 Msa0638820:intron 25.0%
! TCTTATAAGAATGAGTTTGA+AGG - chr4_3:34417784-34417803 Msa0638820:CDS 25.0%
!! TATTGTTATGTCACTTATGT+CGG - chr4_3:34417999-34418018 Msa0638820:five_prime_UTR 25.0%
AGTCGAATATATAGACAGTT+TGG + chr4_3:34413954-34413973 None:intergenic 30.0%
ATTAGGCACAGATAAAAGAA+GGG + chr4_3:34414016-34414035 None:intergenic 30.0%
TATTAGGCACAGATAAAAGA+AGG + chr4_3:34414017-34414036 None:intergenic 30.0%
!! CTTTCAATCTCTAGGATATT+AGG + chr4_3:34414033-34414052 None:intergenic 30.0%
! GCTTAACTTGGAAAGATTTA+TGG - chr4_3:34414112-34414131 Msa0638820:CDS 30.0%
TGAAAGCAAATCAATTCTTC+AGG - chr4_3:34414167-34414186 Msa0638820:CDS 30.0%
GAAAGCAAATCAATTCTTCA+GGG - chr4_3:34414168-34414187 Msa0638820:CDS 30.0%
TAGTTAGTTATTTGCATGCA+TGG + chr4_3:34414300-34414319 None:intergenic 30.0%
AGGAAGTTATATATAGCAGT+TGG + chr4_3:34414327-34414346 None:intergenic 30.0%
!! AAATAGTATGTTGGTGATTG+GGG + chr4_3:34414355-34414374 None:intergenic 30.0%
!! GAAATAGTATGTTGGTGATT+GGG + chr4_3:34414356-34414375 None:intergenic 30.0%
!! TGAAATAGTATGTTGGTGAT+TGG + chr4_3:34414357-34414376 None:intergenic 30.0%
AAGTCAAAACTATTTCCATG+TGG - chr4_3:34414782-34414801 Msa0638820:intron 30.0%
!!! TATTTCCATGTGGTTTTAAC+TGG - chr4_3:34414792-34414811 Msa0638820:intron 30.0%
AAAAACCAGTTAAAACCACA+TGG + chr4_3:34414800-34414819 None:intergenic 30.0%
!!! TGTGGTTTTAACTGGTTTTT+AGG - chr4_3:34414800-34414819 Msa0638820:intron 30.0%
ATATGTATTTCAGGGAGATT+AGG - chr4_3:34415095-34415114 Msa0638820:CDS 30.0%
ATAGTACACTGCTTCTTTAA+CGG + chr4_3:34415404-34415423 None:intergenic 30.0%
TCATCAAGAAAAAGAAGTCT+TGG + chr4_3:34415610-34415629 None:intergenic 30.0%
TATGAAAAGAATAGCTTCCT+TGG - chr4_3:34415669-34415688 Msa0638820:intron 30.0%
ACAAAAAGGATGGAATTCAA+AGG - chr4_3:34415692-34415711 Msa0638820:intron 30.0%
AGTTGAAAAACTTCAGTACT+AGG + chr4_3:34415742-34415761 None:intergenic 30.0%
! AATCTTTGTCTTTTGTCTTC+AGG - chr4_3:34415769-34415788 Msa0638820:intron 30.0%
! TCCTTCTTTGTTTAGTATCA+TGG - chr4_3:34416052-34416071 Msa0638820:CDS 30.0%
ACCATGATACTAAACAAAGA+AGG + chr4_3:34416056-34416075 None:intergenic 30.0%
! ATATTTCCGATTTGTATCGA+AGG + chr4_3:34416088-34416107 None:intergenic 30.0%
TGCAAAATAGATAGACACTA+GGG + chr4_3:34416145-34416164 None:intergenic 30.0%
GATTATCAGAATTCACAATG+TGG + chr4_3:34416174-34416193 None:intergenic 30.0%
ATGGTTGGATACAAAAATGT+AGG + chr4_3:34416221-34416240 None:intergenic 30.0%
AGTTGACATAAAAACATGGT+TGG + chr4_3:34416236-34416255 None:intergenic 30.0%
TCAATGTTAGGATATTGAGA+TGG - chr4_3:34416490-34416509 Msa0638820:CDS 30.0%
GATATCAATTGCTTGTTCTA+TGG + chr4_3:34416540-34416559 None:intergenic 30.0%
ACATACAAGAAAAAACATGC+TGG - chr4_3:34416741-34416760 Msa0638820:intron 30.0%
ATCCAAATCATTAAAGACAG+TGG + chr4_3:34416880-34416899 None:intergenic 30.0%
TAAAAGTAATGGCTCAATTC+AGG - chr4_3:34416899-34416918 Msa0638820:intron 30.0%
GAAGATAGTAGCTAAACTTA+AGG + chr4_3:34416957-34416976 None:intergenic 30.0%
!!! CTAATTTTGCATGTCACTTT+TGG - chr4_3:34416976-34416995 Msa0638820:intron 30.0%
AATCGTTCAAAATTATCCCT+CGG - chr4_3:34417248-34417267 Msa0638820:intron 30.0%
TTTGAACGTGAAAGACTAAA+TGG - chr4_3:34417403-34417422 Msa0638820:intron 30.0%
ACTGAAATCATCAGCAAATA+TGG + chr4_3:34417478-34417497 None:intergenic 30.0%
! ATTGTCCCTGATTTTCTAAT+GGG - chr4_3:34417625-34417644 Msa0638820:intron 30.0%
AATTCAAGGGATTATGATGT+TGG - chr4_3:34417666-34417685 Msa0638820:intron 30.0%
!! AATGGATTAGGAAGATCATT+GGG + chr4_3:34417712-34417731 None:intergenic 30.0%
!! AAATGGATTAGGAAGATCAT+TGG + chr4_3:34417713-34417732 None:intergenic 30.0%
! ATGATCTTCCTAATCCATTT+TGG - chr4_3:34417713-34417732 Msa0638820:intron 30.0%
! AACATAGGGTATTTCCAAAA+TGG + chr4_3:34417730-34417749 None:intergenic 30.0%
GAAAGGCAATATAGAACATA+GGG + chr4_3:34417744-34417763 None:intergenic 30.0%
TGAAAGGCAATATAGAACAT+AGG + chr4_3:34417745-34417764 None:intergenic 30.0%
TGTTCTATATTGCCTTTCAT+AGG - chr4_3:34417746-34417765 Msa0638820:CDS 30.0%
! TTGAAAAGCATACCTATGAA+AGG + chr4_3:34417761-34417780 None:intergenic 30.0%
! TTTCATAGGTATGCTTTTCA+AGG - chr4_3:34417760-34417779 Msa0638820:CDS 30.0%
TTTGAAAGAGATGAAATTGG+TGG - chr4_3:34417814-34417833 Msa0638820:CDS 30.0%
TTGATATGAGTTACTCAAAG+TGG - chr4_3:34417890-34417909 Msa0638820:CDS 30.0%
TGATATGAGTTACTCAAAGT+GGG - chr4_3:34417891-34417910 Msa0638820:CDS 30.0%
GTTGATCTTGGAATATTGTT+GGG - chr4_3:34417913-34417932 Msa0638820:CDS 30.0%
GACATAAGTGACATAACAAT+AGG + chr4_3:34418000-34418019 None:intergenic 30.0%
AACATCTATATGTAAAGGAG+TGG + chr4_3:34418067-34418086 None:intergenic 30.0%
ATATAGACAGTTTGGCATGA+GGG + chr4_3:34413946-34413965 None:intergenic 35.0%
TATATAGACAGTTTGGCATG+AGG + chr4_3:34413947-34413966 None:intergenic 35.0%
! GGAGCATCAAAAAAGATGAA+TGG - chr4_3:34414069-34414088 Msa0638820:CDS 35.0%
GCATCAAAAAAGATGAATGG+AGG - chr4_3:34414072-34414091 Msa0638820:CDS 35.0%
!! AATAGTATGTTGGTGATTGG+GGG + chr4_3:34414354-34414373 None:intergenic 35.0%
!! GCCCTGAACTTTAAAACATA+AGG + chr4_3:34414498-34414517 None:intergenic 35.0%
ATGAAACAAAGCACAATCTG+TGG - chr4_3:34414968-34414987 Msa0638820:CDS 35.0%
GTTCAAACACAAGACAATCA+GGG - chr4_3:34415117-34415136 Msa0638820:CDS 35.0%
TTCAAACACAAGACAATCAG+GGG - chr4_3:34415118-34415137 Msa0638820:CDS 35.0%
!!! TCAGGGGATATTTTGATCAA+TGG - chr4_3:34415134-34415153 Msa0638820:CDS 35.0%
!! AACAAACAAGCATTGGCTTA+TGG - chr4_3:34415158-34415177 Msa0638820:CDS 35.0%
TGTGTCAGGTAATTGAAGTT+GGG + chr4_3:34415431-34415450 None:intergenic 35.0%
TTGTGTCAGGTAATTGAAGT+TGG + chr4_3:34415432-34415451 None:intergenic 35.0%
TCTTCATTAGACATTGTGTC+AGG + chr4_3:34415445-34415464 None:intergenic 35.0%
GATGCAATCAACACAAGAAT+TGG - chr4_3:34415511-34415530 Msa0638820:intron 35.0%
CAATCAACACAAGAATTGGA+GGG - chr4_3:34415515-34415534 Msa0638820:intron 35.0%
TTTCTTGATGAACCAACTAG+TGG - chr4_3:34415619-34415638 Msa0638820:intron 35.0%
AATAGCTTCCTTGGACAAAA+AGG - chr4_3:34415678-34415697 Msa0638820:intron 35.0%
! AATTCCATCCTTTTTGTCCA+AGG + chr4_3:34415689-34415708 None:intergenic 35.0%
!! TTGATGGATTGAGGCAATAA+TGG + chr4_3:34415719-34415738 None:intergenic 35.0%
! AAACTTCAGTACTAGGTTGA+TGG + chr4_3:34415735-34415754 None:intergenic 35.0%
TCAGGCAAAACAGTTTACTT+TGG - chr4_3:34415787-34415806 Msa0638820:intron 35.0%
!! ATGATCGGATGGATTTTGTA+GGG + chr4_3:34415954-34415973 None:intergenic 35.0%
!! AATGATCGGATGGATTTTGT+AGG + chr4_3:34415955-34415974 None:intergenic 35.0%
!! GTTTTAAGCAAATGATCGGA+TGG + chr4_3:34415965-34415984 None:intergenic 35.0%
CAGTATCCTTCGATACAAAT+CGG - chr4_3:34416079-34416098 Msa0638820:intron 35.0%
GTGCAAAATAGATAGACACT+AGG + chr4_3:34416146-34416165 None:intergenic 35.0%
ATGAAGAATATGAGCTCACA+AGG + chr4_3:34416562-34416581 None:intergenic 35.0%
!! GAAACTTTGATGGGTGTTTT+AGG - chr4_3:34416707-34416726 Msa0638820:intron 35.0%
CATGTTCACAAAAGATCTTC+TGG + chr4_3:34416793-34416812 None:intergenic 35.0%
TTCGTGATCTTGGCTATTAT+TGG - chr4_3:34416814-34416833 Msa0638820:intron 35.0%
AGCCACTGTCTTTAATGATT+TGG - chr4_3:34416875-34416894 Msa0638820:CDS 35.0%
!!! CACTTTTGGTTTTCCTTTTC+AGG - chr4_3:34416990-34417009 Msa0638820:intron 35.0%
TTCCTAACTTTCATGACCAT+TGG - chr4_3:34417045-34417064 Msa0638820:intron 35.0%
ATTCTCGAAGTTGTTAGCAT+CGG - chr4_3:34417170-34417189 Msa0638820:intron 35.0%
GAAAGACTAAATGGACACTA+TGG - chr4_3:34417412-34417431 Msa0638820:intron 35.0%
! AAATGGACACTATGGTGTTA+CGG - chr4_3:34417420-34417439 Msa0638820:intron 35.0%
!! TCAAATCCTTTTTGAAGACC+TGG + chr4_3:34417529-34417548 None:intergenic 35.0%
! CATTGTCCCTGATTTTCTAA+TGG - chr4_3:34417624-34417643 Msa0638820:intron 35.0%
! GGGTATTTCCAAAATGGATT+AGG + chr4_3:34417724-34417743 None:intergenic 35.0%
GGATCACTCAATTACATTAG+TGG - chr4_3:34417838-34417857 Msa0638820:CDS 35.0%
GGTTGATCTTGGAATATTGT+TGG - chr4_3:34417912-34417931 Msa0638820:CDS 35.0%
!! AAGAATTGTCTTGTTTGCCT+AGG + chr4_3:34418030-34418049 None:intergenic 35.0%
TAGGCAAACAAGACAATTCT+TGG - chr4_3:34418029-34418048 Msa0638820:five_prime_UTR 35.0%
!!! GAGGGTTTTTAGCATGCATT+TGG + chr4_3:34413928-34413947 None:intergenic 40.0%
ATGAATGGAGGAGAAGAGAA+GGG - chr4_3:34414084-34414103 Msa0638820:CDS 40.0%
! AGAAGGGAGTTTGCTTAACT+TGG - chr4_3:34414100-34414119 Msa0638820:CDS 40.0%
ATTATAGCCAAAAGCTGACC+AGG + chr4_3:34414213-34414232 None:intergenic 40.0%
!! TGGTCAGCTTTTGGCTATAA+TGG - chr4_3:34414212-34414231 Msa0638820:CDS 40.0%
!! GGTCAGCTTTTGGCTATAAT+GGG - chr4_3:34414213-34414232 Msa0638820:CDS 40.0%
! GTAGATTTTCCACAACCAGA+AGG + chr4_3:34414240-34414259 None:intergenic 40.0%
ACACTTCTTGATGCTTTAGC+AGG - chr4_3:34414258-34414277 Msa0638820:CDS 40.0%
!!! TTTTAAAGTTCAGGGCTCGA+TGG - chr4_3:34414502-34414521 Msa0638820:CDS 40.0%
GGTTCAAAGACTACATGCAT+TGG + chr4_3:34415052-34415071 None:intergenic 40.0%
GGTTCAAACACAAGACAATC+AGG - chr4_3:34415116-34415135 Msa0638820:CDS 40.0%
CAATGGCAACAAACAAGCAT+TGG - chr4_3:34415151-34415170 Msa0638820:CDS 40.0%
CACTGCTTCTTTAACGGTTA+AGG + chr4_3:34415398-34415417 None:intergenic 40.0%
GCAATCAACACAAGAATTGG+AGG - chr4_3:34415514-34415533 Msa0638820:intron 40.0%
AAAGAAGTCTTGGACGTGTT+AGG + chr4_3:34415600-34415619 None:intergenic 40.0%
!! AGTACTAGGTTGATGGATTG+AGG + chr4_3:34415728-34415747 None:intergenic 40.0%
!! TGATCGGATGGATTTTGTAG+GGG + chr4_3:34415953-34415972 None:intergenic 40.0%
!! TGAGAACTAAGCACTGATTG+AGG + chr4_3:34416770-34416789 None:intergenic 40.0%
GTGAACATGTTTCGTGATCT+TGG - chr4_3:34416804-34416823 Msa0638820:intron 40.0%
CCAACGCAATATATATGCCA+AGG + chr4_3:34416845-34416864 None:intergenic 40.0%
CCTTGGCATATATATTGCGT+TGG - chr4_3:34416842-34416861 Msa0638820:CDS 40.0%
!! GGTTTTCCTTTTCAGGATAG+AGG - chr4_3:34416997-34417016 Msa0638820:intron 40.0%
AGTGAACCTCTATCCTGAAA+AGG + chr4_3:34417006-34417025 None:intergenic 40.0%
CACCAATGGTCATGAAAGTT+AGG + chr4_3:34417050-34417069 None:intergenic 40.0%
CTAACTTTCATGACCATTGG+TGG - chr4_3:34417048-34417067 Msa0638820:intron 40.0%
ATAAGAAGGGAATCCACCAA+TGG + chr4_3:34417064-34417083 None:intergenic 40.0%
TCATGTCCTCCACATAAGAA+GGG + chr4_3:34417077-34417096 None:intergenic 40.0%
TTCATGTCCTCCACATAAGA+AGG + chr4_3:34417078-34417097 None:intergenic 40.0%
TTCTTATGTGGAGGACATGA+AGG - chr4_3:34417077-34417096 Msa0638820:intron 40.0%
! GGTGTTACGGCATATGTAAT+TGG - chr4_3:34417433-34417452 Msa0638820:intron 40.0%
CTGATGATTTCAGTCATTCC+TGG - chr4_3:34417484-34417503 Msa0638820:intron 40.0%
!! ATCCTTTTTGAAGACCTGGA+GGG + chr4_3:34417525-34417544 None:intergenic 40.0%
!! AATCCTTTTTGAAGACCTGG+AGG + chr4_3:34417526-34417545 None:intergenic 40.0%
ATGGGAATAATAACTGGTGC+TGG - chr4_3:34417643-34417662 Msa0638820:intron 40.0%
! ATAACTGGTGCTGGAATTCA+AGG - chr4_3:34417652-34417671 Msa0638820:intron 40.0%
! TAACTGGTGCTGGAATTCAA+GGG - chr4_3:34417653-34417672 Msa0638820:intron 40.0%
GAAAGAGATGAAATTGGTGG+TGG - chr4_3:34417817-34417836 Msa0638820:CDS 40.0%
!! TACTCAAAGTGGGTTGATCT+TGG - chr4_3:34417901-34417920 Msa0638820:CDS 40.0%
ATATGTAAAGGAGTGGCACT+AGG + chr4_3:34418060-34418079 None:intergenic 40.0%
CTCTTGCGCTTTCAATCTCT+AGG + chr4_3:34414041-34414060 None:intergenic 45.0%
! GATTGAAAGCGCAAGAGAAG+AGG - chr4_3:34414044-34414063 Msa0638820:CDS 45.0%
GATGAATGGAGGAGAAGAGA+AGG - chr4_3:34414083-34414102 Msa0638820:CDS 45.0%
!! GTGACTGTTTCTGCTTCAAC+AGG - chr4_3:34414135-34414154 Msa0638820:CDS 45.0%
TCAATTCTTCAGGGTCTGAC+TGG - chr4_3:34414177-34414196 Msa0638820:CDS 45.0%
!! TTGGCTATAATGGGTCCTTC+TGG - chr4_3:34414222-34414241 Msa0638820:CDS 45.0%
!! ATAATGGGTCCTTCTGGTTG+TGG - chr4_3:34414228-34414247 Msa0638820:CDS 45.0%
!! TGTTGGTGATTGGGGGATTT+AGG + chr4_3:34414347-34414366 None:intergenic 45.0%
!! AGCATTGGCTTATGGAACCT+CGG - chr4_3:34415166-34415185 Msa0638820:CDS 45.0%
TCAACACAAGAATTGGAGGG+TGG - chr4_3:34415518-34415537 Msa0638820:intron 45.0%
CAACACAAGAATTGGAGGGT+GGG - chr4_3:34415519-34415538 Msa0638820:intron 45.0%
AACACAAGAATTGGAGGGTG+GGG - chr4_3:34415520-34415539 Msa0638820:intron 45.0%
! TGGGGTGTTAAAGGCATAAG+TGG - chr4_3:34415538-34415557 Msa0638820:intron 45.0%
! GGGGTGTTAAAGGCATAAGT+GGG - chr4_3:34415539-34415558 Msa0638820:intron 45.0%
! GGGTGTTAAAGGCATAAGTG+GGG - chr4_3:34415540-34415559 Msa0638820:intron 45.0%
! GGTGTTAAAGGCATAAGTGG+GGG - chr4_3:34415541-34415560 Msa0638820:intron 45.0%
GCATAAGTGGGGGTCAAAAA+AGG - chr4_3:34415551-34415570 Msa0638820:intron 45.0%
GCACTATCAAGTCCACTAGT+TGG + chr4_3:34415634-34415653 None:intergenic 45.0%
GCTTCCTTGGACAAAAAGGA+TGG - chr4_3:34415682-34415701 Msa0638820:intron 45.0%
! CTTCTGTTGCATCTGAGGTT+AGG - chr4_3:34415815-34415834 Msa0638820:intron 45.0%
! GAGATGGATTTAGCAGAGAC+TGG - chr4_3:34416506-34416525 Msa0638820:CDS 45.0%
! GGCTATTATTGGTTACGCCT+TGG - chr4_3:34416825-34416844 Msa0638820:CDS 45.0%
!! TGGTGGATTCCCTTCTTATG+TGG - chr4_3:34417065-34417084 Msa0638820:intron 45.0%
TGGATTCCCTTCTTATGTGG+AGG - chr4_3:34417068-34417087 Msa0638820:intron 45.0%
TAATGACGAACGTTCACCGA+GGG + chr4_3:34417267-34417286 None:intergenic 45.0%
ACCTGGAGGGTAATATGCTA+TGG + chr4_3:34417512-34417531 None:intergenic 45.0%
TACCCTCCAGGTCTTCAAAA+AGG - chr4_3:34417520-34417539 Msa0638820:intron 45.0%
CAAGGGATTATGATGTTGGC+AGG - chr4_3:34417670-34417689 Msa0638820:intron 45.0%
!! ATATTTATATACAAATTATT+GGG - chr4_3:34414931-34414950 Msa0638820:CDS 5.0%
! GAAAGCGCAAGAGAAGAGGT+AGG - chr4_3:34414048-34414067 Msa0638820:CDS 50.0%
! CTGACTGGTTATGCAAAGCC+TGG - chr4_3:34414192-34414211 Msa0638820:CDS 50.0%
! TGCAAAGCCTGGTCAGCTTT+TGG - chr4_3:34414203-34414222 Msa0638820:CDS 50.0%
CAAAGCACAATCTGTGGCAG+CGG - chr4_3:34414974-34414993 Msa0638820:intron 50.0%
AAAGCACAATCTGTGGCAGC+GGG - chr4_3:34414975-34414994 Msa0638820:intron 50.0%
! ATTGGAGGGTGGGGTGTTAA+AGG - chr4_3:34415529-34415548 Msa0638820:intron 50.0%
ACCTGCTTCTGTTGCATCTG+AGG - chr4_3:34415810-34415829 Msa0638820:intron 50.0%
ACCTCAGATGCAACAGAAGC+AGG + chr4_3:34415814-34415833 None:intergenic 50.0%
! GGATTTTGTAGGGGAGGACA+AGG + chr4_3:34415944-34415963 None:intergenic 50.0%
!! TCGGATGGATTTTGTAGGGG+AGG + chr4_3:34415950-34415969 None:intergenic 50.0%
CTAATGACGAACGTTCACCG+AGG + chr4_3:34417268-34417287 None:intergenic 50.0%
GGGTAATATGCTATGGCTCC+AGG + chr4_3:34417505-34417524 None:intergenic 50.0%
GCCATAGCATATTACCCTCC+AGG - chr4_3:34417508-34417527 Msa0638820:intron 50.0%
GGGATTATGATGTTGGCAGG+TGG - chr4_3:34417673-34417692 Msa0638820:intron 50.0%
! CACTTATGTCGGTGTCTCCT+AGG - chr4_3:34418010-34418029 Msa0638820:five_prime_UTR 50.0%
AAGCACAATCTGTGGCAGCG+GGG - chr4_3:34414976-34414995 Msa0638820:intron 55.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 34413873 34418130 34413873 ID=Msa0638820;Name=Msa0638820
chr4_3 mRNA 34413873 34418130 34413873 ID=Msa0638820-mRNA-1;Parent=Msa0638820;Name=Msa0638820-mRNA-1;_AED=0.26;_eAED=0.26;_QI=133|1|1|1|1|1|8|38|675
chr4_3 exon 34413873 34414603 34413873 ID=Msa0638820-mRNA-1:exon:7941;Parent=Msa0638820-mRNA-1
chr4_3 exon 34414905 34414991 34414905 ID=Msa0638820-mRNA-1:exon:7940;Parent=Msa0638820-mRNA-1
chr4_3 exon 34415083 34415274 34415083 ID=Msa0638820-mRNA-1:exon:7939;Parent=Msa0638820-mRNA-1
chr4_3 exon 34415360 34415503 34415360 ID=Msa0638820-mRNA-1:exon:7938;Parent=Msa0638820-mRNA-1
chr4_3 exon 34415997 34416083 34415997 ID=Msa0638820-mRNA-1:exon:7937;Parent=Msa0638820-mRNA-1
chr4_3 exon 34416172 34416642 34416172 ID=Msa0638820-mRNA-1:exon:7936;Parent=Msa0638820-mRNA-1
chr4_3 exon 34416816 34416895 34416816 ID=Msa0638820-mRNA-1:exon:7935;Parent=Msa0638820-mRNA-1
chr4_3 exon 34417724 34418130 34417724 ID=Msa0638820-mRNA-1:exon:7934;Parent=Msa0638820-mRNA-1
chr4_3 five_prime_UTR 34417998 34418130 34417998 ID=Msa0638820-mRNA-1:five_prime_utr;Parent=Msa0638820-mRNA-1
chr4_3 CDS 34417724 34417997 34417724 ID=Msa0638820-mRNA-1:cds;Parent=Msa0638820-mRNA-1
chr4_3 CDS 34416816 34416895 34416816 ID=Msa0638820-mRNA-1:cds;Parent=Msa0638820-mRNA-1
chr4_3 CDS 34416172 34416642 34416172 ID=Msa0638820-mRNA-1:cds;Parent=Msa0638820-mRNA-1
chr4_3 CDS 34415997 34416083 34415997 ID=Msa0638820-mRNA-1:cds;Parent=Msa0638820-mRNA-1
chr4_3 CDS 34415360 34415503 34415360 ID=Msa0638820-mRNA-1:cds;Parent=Msa0638820-mRNA-1
chr4_3 CDS 34415083 34415274 34415083 ID=Msa0638820-mRNA-1:cds;Parent=Msa0638820-mRNA-1
chr4_3 CDS 34414905 34414991 34414905 ID=Msa0638820-mRNA-1:cds;Parent=Msa0638820-mRNA-1
chr4_3 CDS 34413911 34414603 34413911 ID=Msa0638820-mRNA-1:cds;Parent=Msa0638820-mRNA-1
chr4_3 three_prime_UTR 34413873 34413910 34413873 ID=Msa0638820-mRNA-1:three_prime_utr;Parent=Msa0638820-mRNA-1
Gene Sequence

>Msa0638820

ATGGCTTCCCTTCTTTTATCTGTGCCTAATATCCTAGAGATTGAAAGCGCAAGAGAAGAGGTAGGAGCATCAAAAAAGATGAATGGAGGAGAAGAGAAGGGAGTTTGCTTAACTTGGAAAGATTTATGGGTGACTGTTTCTGCTTCAACAGGAAAAACCAATGAAAGCAAATCAATTCTTCAGGGTCTGACTGGTTATGCAAAGCCTGGTCAGCTTTTGGCTATAATGGGTCCTTCTGGTTGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGGAGATTAGGTTCAAACACAAGACAATCAGGGGATATTTTGATCAATGGCAACAAACAAGCATTGGCTTATGGAACCTCGGCATATGTCACACAAGATGATACTTTATTAACAACCTTAACCGTTAAAGAAGCAGTGTACTATTCAGCCCAACTTCAATTACCTGACACAATGTCTAATGAAGAGAAAAAAGAGAGAGCTGATTTTACAATAAGAGAAATGGGTCTGCAAGATGCAATCAACACAAGAATTGGAGGGTGGGGTGTTAAAGGCATAAGTGGGGGTCAAAAAAGGAGAGTCAGCATTTGCATTGAGATCCTAACACGTCCAAGACTTCTTTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCTTACTATGTTATGAAAAGAATAGCTTCCTTGGACAAAAAGGATGGAATTCAAAGGACCATTATTGCCTCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCCATAATCTTTGTCTTTTGTCTTCAGGCAAAACAGTTTACTTTGGACCTGCTTCTGTTGCATCTGAGTTTTTTGCTTTGAACGGATTTCCTTGTCCTCCCCTACAAAATCCATCCGATCATTTGCTTAAAACTATAAACAAGGATTTTGATCAGGATATTGAGATGGATTTAGCAGAGACTGGAACAATTTCCATAGAACAAGCAATTGATATCCTTGTGAGCTCATATTCTTCATCCGAAAGAAACCAAGAAATTAAAAATGAAGTATCAATATTGTCTATAGTATTGTCTTTAAAGGATAATAATTCAACATACAAGAAAAAACATGCTGGCTTCCTCAATCAGTGCTTAGTTCTCACCAGAAGATCTTTTGTGAACATGTTTCGTGATCTTGGCTATTATTGGTTACGCCTTGGCATATATATTGCGTTGGCTATAAGTTTAGCCACTGTCTTTAATGATTTGGATAAAAGTAATGGCTCAATTCAGGATAGAGGTTCACTTCTTATGTTTGTGTTTTCATTCCTAACTTTCATGACCATTGGTGGATTCCCTTCTTATGTGGAGGACATGAAGGTATTTGAACGTGAAAGACTAAATGGACACTATGGTGTTACGGCATATGTAATTGGAAACACACTTTCAGCTATTCCATATTTGCTGATGATTTCAGTCATTCCTGGAGCCATAGCATATTACCCTCCAGGTCTTCAAAAAGGATTTGAGCACTTCATATATTTTATCTGTGCTCTATTTTCTTGTCTAATGTTAGTGGAGAGTCTTATGATGATAGTTGCTAGCATTGTCCCTGATTTTCTAATGGGAATAATAACTGGTGCTGGAATTCAAGGGATTATGATGTTGGCAGGTGGATTCTTTAGATTGCCCAATGATCTTCCTAATCCATTTTGGAAATACCCTATGTTCTATATTGCCTTTCATAGGTATGCTTTTCAAGGATCTTATAAGAATGAGTTTGAAGGACTAAAATTTGAAAGAGATGAAATTGGTGGTGGATCACTCAATTACATTAGTGGTGAAGAGATTCTAAGAAATAAATTTCAAGTTGATATGAGTTACTCAAAGTGGGTTGATCTTGGAATATTGTTGGGTATGATTGTTCTATATCGACTTGTGTTTTTGATTATTATCAAAACTACTGAGAAGCTTAAACCTATTGTTATGTCACTTATGTCGGTGTCTCCTAGGCAAACAAGACAATTCTTGGAGAATCCTAGTGCCACTCCTTTACATATAGATGTTGTATAA
Protein sequence

>Msa0638820

MASLLLSVPNILEIESAREEVGASKKMNGGEEKGVCLTWKDLWVTVSASTGKTNESKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTRQSGDILINGNKQALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSNEEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSSGKTVYFGPASVASEFFALNGFPCPPLQNPSDHLLKTINKDFDQDIEMDLAETGTISIEQAIDILVSSYSSSERNQEIKNEVSILSIVLSLKDNNSTYKKKHAGFLNQCLVLTRRSFVNMFRDLGYYWLRLGIYIALAISLATVFNDLDKSNGSIQDRGSLLMFVFSFLTFMTIGGFPSYVEDMKVFERERLNGHYGVTAYVIGNTLSAIPYLLMISVIPGAIAYYPPGLQKGFEHFIYFICALFSCLMLVESLMMIVASIVPDFLMGIITGAGIQGIMMLAGGFFRLPNDLPNPFWKYPMFYIAFHRYAFQGSYKNEFEGLKFERDEIGGGSLNYISGEEILRNKFQVDMSYSKWVDLGILLGMIVLYRLVFLIIIKTTEKLKPIVMSLMSVSPRQTRQFLENPSATPLHIDVV*