AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0368380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0368380 MtrunA17_Chr3g0112291 95.396 391 11 3 1 387 1 388 0.0 761
Msa0368380 MtrunA17_Chr5g0435721 65.491 397 113 5 1 380 92 481 1.34e-166 475
Msa0368380 MtrunA17_Chr4g0070871 44.543 339 144 5 69 379 186 508 2.43e-87 273
Msa0368380 MtrunA17_Chr1g0158781 45.777 367 163 10 23 375 36 380 5.27e-83 258
Msa0368380 MtrunA17_Chr3g0135961 43.452 336 138 5 82 379 223 544 7.02e-81 258
Msa0368380 MtrunA17_Chr2g0299981 41.108 343 160 5 73 379 204 540 1.42e-80 257
Msa0368380 MtrunA17_Chr1g0150781 42.985 335 136 6 82 379 232 548 1.46e-79 254
Msa0368380 MtrunA17_Chr5g0396731 49.609 256 114 4 76 325 59 305 9.67e-77 241
Msa0368380 MtrunA17_Chr8g0389921 43.810 315 130 5 90 380 149 440 1.73e-76 243
Msa0368380 MtrunA17_Chr3g0136711 33.439 314 170 3 74 387 19 293 1.22e-46 161
Msa0368380 MtrunA17_Chr3g0126511 36.395 294 146 4 91 383 96 349 1.31e-46 163
Msa0368380 MtrunA17_Chr1g0212961 36.700 297 143 5 90 386 96 347 3.64e-45 159
Msa0368380 MtrunA17_Chr1g0150451 34.365 323 171 6 65 387 55 336 9.12e-45 157
Msa0368380 MtrunA17_Chr3g0105371 34.323 303 161 6 76 375 72 339 5.09e-41 147
Msa0368380 MtrunA17_Chr3g0105351 32.119 302 167 6 76 375 50 315 5.07e-39 142
Msa0368380 MtrunA17_Chr5g0430481 32.665 349 179 10 46 375 64 375 9.17e-39 142
Msa0368380 MtrunA17_Chr4g0001761 34.767 279 133 9 89 325 23 294 2.13e-33 127
Msa0368380 MtrunA17_Chr1g0171571 31.987 297 168 8 82 375 380 645 1.75e-32 129
Msa0368380 MtrunA17_Chr3g0136811 33.333 273 133 9 89 319 23 288 7.66e-32 123
Msa0368380 MtrunA17_Chr5g0407161 31.230 317 165 10 75 377 71 348 1.60e-30 120
Msa0368380 MtrunA17_Chr2g0317021 32.343 303 159 9 77 375 73 333 1.93e-29 116
Msa0368380 MtrunA17_Chr8g0360351 33.942 274 136 7 102 372 48 279 3.75e-29 114
Msa0368380 MtrunA17_Chr2g0293811 31.679 262 144 6 117 372 97 329 8.15e-29 115
Msa0368380 MtrunA17_Chr4g0050381 31.271 291 154 9 89 375 29 277 1.41e-28 112
Msa0368380 MtrunA17_Chr3g0138281 30.368 326 172 10 64 372 56 343 1.73e-28 114
Msa0368380 MtrunA17_Chr1g0150071 30.466 279 139 10 89 322 23 291 2.12e-28 114
Msa0368380 MtrunA17_Chr1g0194191 31.641 256 131 7 97 328 87 322 3.82e-27 111
Msa0368380 MtrunA17_Chr4g0051661 33.191 235 120 7 102 326 165 372 4.34e-27 111
Msa0368380 MtrunA17_Chr2g0279151 31.987 297 151 11 86 375 29 281 2.06e-26 107
Msa0368380 MtrunA17_Chr5g0426141 30.872 298 154 8 85 375 30 282 9.71e-26 105
Msa0368380 MtrunA17_Chr4g0065141 27.986 293 147 9 89 372 111 348 1.91e-25 106
Msa0368380 MtrunA17_Chr3g0115851 30.263 304 164 8 77 375 22 282 4.21e-25 103
Msa0368380 MtrunA17_Chr3g0127091 25.617 324 169 8 89 374 60 349 2.50e-24 103
Msa0368380 MtrunA17_Chr3g0144111 30.916 262 115 8 117 372 24 225 1.83e-23 98.6
Msa0368380 MtrunA17_Chr7g0243571 31.061 264 120 10 103 318 75 324 4.13e-23 100
Msa0368380 MtrunA17_Chr1g0185141 32.068 237 96 6 197 383 226 447 9.33e-23 100
Msa0368380 MtrunA17_Chr4g0004971 30.315 254 126 8 97 311 55 296 1.05e-22 98.2
Msa0368380 MtrunA17_Chr7g0272061 30.000 330 176 14 33 318 3 321 1.10e-22 98.2
Msa0368380 MtrunA17_Chr4g0067711 31.890 254 146 10 97 326 68 318 4.43e-22 96.3
Msa0368380 MtrunA17_Chr1g0192421 32.971 276 141 13 77 318 45 310 5.63e-22 95.9
Msa0368380 MtrunA17_Chr2g0324061 32.222 270 121 11 97 318 68 323 2.69e-21 95.1
Msa0368380 MtrunA17_Chr2g0295401 30.418 263 124 10 97 318 69 313 7.93e-21 92.8
Msa0368380 MtrunA17_Chr7g0249421 29.537 281 130 8 97 318 73 344 1.83e-20 92.8
Msa0368380 MtrunA17_Chr1g0207571 26.301 346 190 12 75 384 29 345 2.72e-20 91.7
Msa0368380 MtrunA17_Chr1g0151781 30.682 264 134 11 92 320 41 290 7.68e-20 89.7
Msa0368380 MtrunA17_Chr4g0066371 28.745 247 124 10 103 314 69 298 1.48e-18 86.7
Msa0368380 MtrunA17_Chr8g0342431 29.286 280 145 10 92 318 55 334 2.06e-18 86.3
Msa0368380 MtrunA17_Chr4g0022171 30.996 271 124 11 97 318 74 330 3.84e-18 85.9
Msa0368380 MtrunA17_Chr6g0483411 27.309 249 144 7 97 323 52 285 2.61e-17 82.0
Msa0368380 MtrunA17_Chr7g0221691 30.515 272 131 9 97 318 106 369 3.92e-17 82.8
Msa0368380 MtrunA17_Chr1g0213351 25.987 304 147 11 120 374 80 354 5.58e-17 81.6
Msa0368380 MtrunA17_Chr8g0371321 27.885 312 150 10 111 374 69 353 1.28e-16 80.9
Msa0368380 MtrunA17_Chr7g0263281 26.068 234 126 7 120 318 71 292 1.39e-16 80.5
Msa0368380 MtrunA17_Chr2g0286951 29.719 249 123 12 100 313 67 298 1.89e-16 80.5
Msa0368380 MtrunA17_Chr1g0181901 26.923 234 124 7 120 318 76 297 5.57e-16 79.0
Msa0368380 MtrunA17_Chr1g0211251 27.778 234 124 7 120 319 81 303 9.00e-16 78.2
Msa0368380 MtrunA17_Chr7g0250061 25.436 287 166 7 120 372 76 348 1.72e-15 77.4
Msa0368380 MtrunA17_Chr7g0271971 29.245 212 118 5 118 314 66 260 6.40e-15 75.9
Msa0368380 MtrunA17_Chr7g0225501 32.093 215 108 10 118 312 84 280 7.76e-15 75.9
Msa0368380 MtrunA17_Chr6g0486661 27.953 254 128 9 103 318 107 343 1.20e-14 75.9
Msa0368380 MtrunA17_Chr1g0209451 28.571 217 123 6 113 314 61 260 1.60e-14 74.7
Msa0368380 MtrunA17_Chr7g0256751 26.621 293 161 12 67 319 13 291 2.91e-14 73.9
Msa0368380 MtrunA17_Chr3g0089721 26.271 236 125 7 120 319 68 290 1.13e-13 71.6
Msa0368380 MtrunA17_Chr1g0192471 27.315 216 125 5 114 314 62 260 1.67e-13 71.6
Msa0368380 MtrunA17_Chr3g0089711 25.847 236 126 7 120 319 68 290 4.64e-13 69.7
Msa0368380 MtrunA17_Chr7g0238501 23.208 293 178 8 120 374 263 546 2.38e-12 68.6
Msa0368380 MtrunA17_Chr7g0256771 27.197 239 119 10 120 319 70 292 3.59e-12 66.6
Msa0368380 MtrunA17_Chr4g0063051 25.463 216 121 8 120 318 61 253 1.70e-11 65.1
Msa0368380 MtrunA17_Chr2g0295991 27.542 236 122 7 189 384 260 486 7.13e-11 63.5
Msa0368380 MtrunA17_Chr3g0089691 30.357 168 76 6 188 319 42 204 8.23e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0368380 AT1G07430.1 61.194 335 98 5 76 380 107 439 2.19e-141 410
Msa0368380 AT2G29380.1 59.207 353 127 6 33 376 18 362 8.83e-141 405
Msa0368380 AT3G11410.1 57.946 409 137 10 1 384 1 399 5.77e-137 397
Msa0368380 AT5G59220.1 65.161 310 87 4 85 377 107 412 2.21e-122 360
Msa0368380 AT5G51760.2 49.848 329 128 8 74 375 64 382 3.85e-92 282
Msa0368380 AT5G51760.1 49.848 329 128 8 74 375 94 412 1.11e-91 282
Msa0368380 AT4G26080.1 45.455 330 139 5 82 386 121 434 1.01e-88 275
Msa0368380 AT5G59220.2 66.495 194 55 3 85 272 107 296 3.84e-87 266
Msa0368380 AT5G57050.2 41.753 388 182 6 29 386 10 383 4.03e-87 269
Msa0368380 AT5G57050.1 44.068 354 154 6 63 386 84 423 2.64e-86 268
Msa0368380 AT1G17550.1 45.373 335 147 7 82 384 181 511 3.88e-83 263
Msa0368380 AT1G17550.2 45.373 335 147 7 82 384 181 511 3.88e-83 263
Msa0368380 AT1G72770.4 43.598 328 152 4 82 379 182 506 4.42e-80 255
Msa0368380 AT1G72770.1 43.598 328 152 4 82 379 182 506 4.42e-80 255
Msa0368380 AT1G72770.3 43.598 328 152 4 82 379 182 506 4.42e-80 255
Msa0368380 AT5G57050.3 43.568 241 94 5 63 276 84 309 1.94e-54 182
Msa0368380 AT5G53140.1 35.906 298 150 4 91 387 103 360 3.86e-47 166
Msa0368380 AT5G53140.2 35.906 298 150 4 91 387 103 360 3.86e-47 166
Msa0368380 AT1G67820.2 40.417 240 125 2 90 328 85 307 2.74e-46 164
Msa0368380 AT1G67820.1 40.417 240 125 2 90 328 121 343 6.29e-46 164
Msa0368380 AT1G72770.2 40.455 220 102 2 82 272 182 401 1.35e-45 162
Msa0368380 AT1G72770.5 40.455 220 102 2 82 272 182 401 1.35e-45 162
Msa0368380 AT5G24940.1 38.211 246 136 2 74 319 18 247 3.43e-45 162
Msa0368380 AT4G31750.1 34.426 305 161 4 74 378 18 283 6.07e-45 157
Msa0368380 AT4G31750.3 34.426 305 161 4 74 378 18 283 6.07e-45 157
Msa0368380 AT5G10740.1 34.091 308 164 4 65 372 9 277 7.94e-45 158
Msa0368380 AT5G10740.2 34.091 308 164 4 65 372 9 277 7.94e-45 158
Msa0368380 AT4G31750.2 34.426 305 161 4 74 378 18 283 9.61e-45 157
Msa0368380 AT1G43900.1 40.598 234 114 5 90 319 124 336 2.04e-43 155
Msa0368380 AT2G30020.1 36.170 282 144 6 97 376 147 394 1.18e-39 145
Msa0368380 AT2G40180.1 34.783 299 155 8 83 375 122 386 1.34e-38 142
Msa0368380 AT2G40860.4 34.256 289 153 9 91 375 296 551 8.24e-36 138
Msa0368380 AT1G07160.1 33.333 279 153 5 97 374 130 376 1.67e-35 134
Msa0368380 AT2G40860.1 33.910 289 154 9 91 375 394 649 2.00e-35 137
Msa0368380 AT2G40860.2 34.746 236 141 5 91 323 394 619 3.20e-33 131
Msa0368380 AT1G48040.1 33.935 277 132 8 111 372 107 347 1.07e-31 124
Msa0368380 AT2G25620.1 30.769 325 162 9 77 375 70 357 1.72e-31 123
Msa0368380 AT2G25620.2 30.769 325 162 9 77 375 70 357 1.72e-31 123
Msa0368380 AT3G15260.2 33.218 289 147 8 91 375 43 289 7.26e-30 117
Msa0368380 AT3G15260.1 33.218 289 147 8 91 375 43 289 7.26e-30 117
Msa0368380 AT3G51470.2 34.363 259 125 8 120 372 62 281 2.77e-29 115
Msa0368380 AT3G51470.1 34.363 259 125 8 120 372 106 325 4.00e-29 116
Msa0368380 AT3G17250.1 32.979 282 118 7 117 372 155 391 9.16e-29 116
Msa0368380 AT2G25070.1 30.714 280 143 9 89 325 23 294 2.35e-28 114
Msa0368380 AT2G25070.2 30.714 280 143 9 89 325 23 294 2.35e-28 114
Msa0368380 AT4G31860.3 32.075 265 131 7 89 311 23 280 7.87e-28 111
Msa0368380 AT4G31860.1 30.824 279 144 7 89 325 23 294 2.06e-27 111
Msa0368380 AT4G31860.2 32.308 260 127 7 89 306 23 275 3.96e-27 109
Msa0368380 AT1G78200.1 30.333 300 156 10 85 375 28 283 4.25e-27 109
Msa0368380 AT1G78200.3 30.333 300 156 10 85 375 28 283 4.25e-27 109
Msa0368380 AT1G78200.2 30.333 300 156 10 85 375 28 283 4.25e-27 109
Msa0368380 AT3G62260.2 31.987 297 146 9 97 372 86 347 6.54e-27 110
Msa0368380 AT3G62260.1 31.987 297 146 9 97 372 85 346 6.99e-27 110
Msa0368380 AT2G33700.1 31.660 259 132 8 120 372 123 342 1.34e-26 109
Msa0368380 AT3G16800.2 30.818 318 183 13 28 319 3 309 1.46e-26 109
Msa0368380 AT3G16800.1 30.818 318 183 13 28 319 3 309 1.46e-26 109
Msa0368380 AT3G16800.3 30.818 318 183 13 28 319 3 309 1.46e-26 109
Msa0368380 AT3G62260.3 32.028 281 143 8 105 372 12 257 2.64e-26 107
Msa0368380 AT2G34740.1 31.786 280 138 9 102 374 101 334 2.72e-26 108
Msa0368380 AT1G78200.5 30.851 282 143 9 102 375 1 238 3.33e-26 105
Msa0368380 AT1G78200.4 30.851 282 143 9 102 375 1 238 3.33e-26 105
Msa0368380 AT1G34750.2 32.203 295 146 10 89 375 34 282 9.42e-26 105
Msa0368380 AT1G34750.1 32.203 295 146 10 89 375 34 282 9.42e-26 105
Msa0368380 AT1G34750.3 32.203 295 146 10 89 375 34 282 9.42e-26 105
Msa0368380 AT4G28400.3 33.484 221 125 6 102 319 27 228 2.76e-25 103
Msa0368380 AT5G26010.1 33.913 230 112 7 122 325 75 290 3.97e-25 104
Msa0368380 AT1G22280.3 29.530 298 164 8 85 375 29 287 4.49e-25 103
Msa0368380 AT4G28400.1 33.484 221 125 6 102 319 49 250 5.09e-25 103
Msa0368380 AT4G32950.1 32.389 247 132 9 92 318 45 276 1.07e-24 103
Msa0368380 AT3G05640.2 34.630 257 129 10 92 318 62 309 3.87e-24 102
Msa0368380 AT3G05640.1 34.630 257 129 10 92 318 62 309 3.87e-24 102
Msa0368380 AT3G05640.3 34.630 257 129 10 92 318 62 309 3.87e-24 102
Msa0368380 AT2G40860.3 34.272 213 125 6 91 299 394 595 4.75e-24 104
Msa0368380 AT2G20630.1 32.579 221 127 6 102 319 45 246 1.75e-23 99.4
Msa0368380 AT1G22280.1 29.492 295 162 8 85 375 29 281 2.08e-23 99.0
Msa0368380 AT2G20630.2 32.579 221 127 6 102 319 45 246 3.26e-23 98.6
Msa0368380 AT2G34740.2 34.579 214 110 7 102 308 115 305 6.62e-23 98.6
Msa0368380 AT2G34740.3 34.579 214 110 7 102 308 97 287 7.03e-23 98.2
Msa0368380 AT5G27930.1 31.761 318 179 12 33 318 3 314 8.07e-23 99.0
Msa0368380 AT5G27930.2 31.761 318 179 12 33 318 3 314 8.07e-23 99.0
Msa0368380 AT4G28400.2 33.333 210 118 6 102 308 49 239 8.68e-23 96.7
Msa0368380 AT4G27800.1 27.356 329 161 9 89 376 59 350 6.30e-22 96.7
Msa0368380 AT1G34750.4 33.621 232 127 8 89 315 34 243 7.58e-22 94.0
Msa0368380 AT5G01700.1 32.000 250 141 9 97 321 6 251 8.83e-22 95.5
Msa0368380 AT5G01700.2 32.000 250 141 9 97 321 55 300 1.46e-21 95.5
Msa0368380 AT3G16800.4 40.714 140 66 4 197 319 75 214 3.27e-21 92.4
Msa0368380 AT3G16800.6 40.714 140 66 4 197 319 75 214 3.27e-21 92.4
Msa0368380 AT1G18030.1 29.787 282 153 10 68 323 53 315 5.33e-21 93.6
Msa0368380 AT4G08260.1 29.710 276 127 9 102 376 1 210 5.44e-21 90.9
Msa0368380 AT4G03415.1 31.985 272 121 9 97 318 75 332 2.15e-20 92.8
Msa0368380 AT4G03415.3 31.985 272 121 9 97 318 75 332 2.15e-20 92.8
Msa0368380 AT4G03415.2 31.985 272 121 9 97 318 75 332 2.15e-20 92.8
Msa0368380 AT2G20050.1 31.890 254 115 13 103 318 126 359 4.76e-20 92.8
Msa0368380 AT2G20050.2 31.890 254 115 13 103 318 126 359 5.21e-20 92.8
Msa0368380 AT4G32950.2 30.172 232 131 7 92 305 45 263 6.27e-20 89.4
Msa0368380 AT4G11040.1 28.328 293 120 12 91 375 80 290 7.02e-20 89.4
Msa0368380 AT1G79630.1 28.772 285 140 7 97 318 75 359 2.87e-19 89.7
Msa0368380 AT1G79630.8 28.772 285 140 7 97 318 71 355 3.47e-19 89.7
Msa0368380 AT1G16220.1 34.328 201 100 6 190 374 192 376 6.86e-19 88.6
Msa0368380 AT1G79630.6 40.000 145 71 4 190 318 105 249 6.96e-19 87.8
Msa0368380 AT1G79630.3 40.000 145 71 4 190 318 105 249 6.96e-19 87.8
Msa0368380 AT1G79630.4 40.000 145 71 4 190 318 105 249 6.96e-19 87.8
Msa0368380 AT1G79630.5 40.000 145 71 4 190 318 105 249 6.96e-19 87.8
Msa0368380 AT1G79630.2 40.000 145 71 4 190 318 145 289 8.13e-19 88.2
Msa0368380 AT1G79630.7 40.000 145 71 4 190 318 145 289 8.13e-19 88.2
Msa0368380 AT1G03590.1 30.483 269 126 9 97 318 68 322 9.84e-19 88.2
Msa0368380 AT1G18030.2 29.588 267 143 11 68 308 53 300 1.04e-18 86.3
Msa0368380 AT3G55050.1 26.846 298 154 10 120 375 84 359 1.11e-18 87.4
Msa0368380 AT3G55050.2 26.846 298 154 10 120 375 84 359 1.11e-18 87.4
Msa0368380 AT4G27800.3 27.778 270 148 7 89 323 59 316 1.62e-18 85.9
Msa0368380 AT4G27800.2 27.778 270 148 7 89 323 59 316 1.63e-18 86.3
Msa0368380 AT1G09160.2 29.954 217 120 6 118 319 66 265 2.17e-18 86.7
Msa0368380 AT1G09160.1 29.954 217 120 6 118 319 66 265 2.17e-18 86.7
Msa0368380 AT3G02750.2 34.031 191 99 6 144 318 174 353 2.41e-18 87.0
Msa0368380 AT3G02750.1 34.031 191 99 6 144 318 174 353 2.41e-18 87.0
Msa0368380 AT4G33920.1 26.625 323 178 9 102 385 47 349 3.34e-18 85.9
Msa0368380 AT5G02760.1 27.931 290 157 12 120 374 72 344 4.12e-18 85.5
Msa0368380 AT3G63320.2 35.152 165 61 5 197 315 85 249 6.93e-18 84.7
Msa0368380 AT3G63320.1 29.278 263 116 9 122 315 71 332 7.61e-18 85.1
Msa0368380 AT3G27140.1 29.091 275 108 7 102 375 1 189 1.60e-17 81.6
Msa0368380 AT5G36250.1 28.782 271 143 10 97 318 75 344 5.73e-17 82.8
Msa0368380 AT3G12620.2 26.897 290 162 10 120 374 83 357 5.90e-17 82.0
Msa0368380 AT3G12620.1 26.897 290 162 10 120 374 83 357 5.90e-17 82.0
Msa0368380 AT3G06270.1 28.458 253 131 9 100 318 68 304 1.91e-16 80.1
Msa0368380 AT4G33920.2 29.565 230 124 5 191 385 40 266 2.37e-16 79.3
Msa0368380 AT4G33920.3 29.694 229 123 5 191 384 10 235 3.74e-16 78.2
Msa0368380 AT5G66080.1 27.922 308 155 11 111 374 72 356 4.56e-16 79.3
Msa0368380 AT3G63340.11 29.098 244 107 8 197 387 233 463 3.37e-15 77.8
Msa0368380 AT3G63340.6 29.098 244 107 8 197 387 233 463 3.78e-15 77.8
Msa0368380 AT3G63340.3 29.098 244 107 8 197 387 233 463 3.78e-15 77.8
Msa0368380 AT3G63340.10 29.098 244 107 8 197 387 233 463 3.78e-15 77.8
Msa0368380 AT3G63340.4 29.098 244 107 8 197 387 233 463 3.78e-15 77.8
Msa0368380 AT3G63340.8 28.571 245 107 8 197 387 233 463 3.82e-15 77.8
Msa0368380 AT3G63340.5 28.571 245 107 8 197 387 233 463 3.96e-15 77.8
Msa0368380 AT3G63340.1 28.571 245 107 8 197 387 233 463 3.96e-15 77.8
Msa0368380 AT3G63340.7 28.571 245 107 8 197 387 233 463 4.41e-15 77.8
Msa0368380 AT3G63340.12 29.098 244 107 8 197 387 233 463 4.84e-15 77.0
Msa0368380 AT4G38520.2 27.953 254 119 9 111 319 69 303 8.68e-15 75.9
Msa0368380 AT4G38520.1 27.953 254 119 9 111 319 69 303 8.68e-15 75.9
Msa0368380 AT3G51370.1 24.765 319 148 12 120 383 79 360 1.17e-14 75.1
Msa0368380 AT3G51370.3 24.765 319 148 12 120 383 79 360 1.17e-14 75.1
Msa0368380 AT3G16560.1 29.565 230 117 7 191 384 270 490 1.53e-14 75.5
Msa0368380 AT3G16560.4 29.565 230 117 7 191 384 270 490 1.53e-14 75.5
Msa0368380 AT3G16560.2 29.565 230 117 7 191 384 270 490 1.53e-14 75.5
Msa0368380 AT1G68410.4 29.876 241 130 8 100 319 48 270 1.66e-14 75.1
Msa0368380 AT1G68410.3 29.876 241 130 8 100 319 48 270 1.66e-14 75.1
Msa0368380 AT1G68410.1 29.876 241 130 8 100 319 48 270 1.66e-14 75.1
Msa0368380 AT1G68410.2 29.876 241 130 8 100 319 48 270 1.66e-14 75.1
Msa0368380 AT5G66080.2 30.396 227 101 8 191 374 40 252 4.26e-14 72.4
Msa0368380 AT5G36250.3 28.309 272 144 11 97 318 75 345 4.71e-14 73.2
Msa0368380 AT2G05050.1 38.095 126 56 5 252 376 87 191 7.16e-14 70.1
Msa0368380 AT3G51370.2 28.270 237 109 9 191 383 56 275 7.78e-14 72.0
Msa0368380 AT5G36250.2 27.368 285 143 11 97 318 75 358 8.82e-14 73.2
Msa0368380 AT3G63340.2 33.721 172 89 7 227 387 339 496 6.50e-13 70.9
Msa0368380 AT1G47380.1 29.717 212 117 6 118 314 62 256 1.70e-12 68.9
Msa0368380 AT3G16560.3 31.875 160 73 4 191 319 270 424 3.72e-12 68.2

Find 122 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAATTAATCAATTAATTA+AGG 0.136334 3_1:-65019944 Msa0368380:three_prime_UTR
TCCCTCCCGGCGCCGGAATT+TGG 0.164906 3_1:-65021223 Msa0368380:CDS
ACTGAAGTAACACCGAATTT+TGG 0.230737 3_1:+65021018 None:intergenic
CTGGAGGGCGCGTGATCTAT+TGG 0.235228 3_1:-65020447 Msa0368380:CDS
ATGTAATGGGATGGGAATTT+AGG 0.269328 3_1:-65019827 Msa0368380:three_prime_UTR
TGTTCTTATGAATGAACTAT+TGG 0.270978 3_1:-65019599 Msa0368380:three_prime_UTR
TCCTAGCGAGTGATGGACTA+TGG 0.324174 3_1:-65020213 Msa0368380:CDS
TCGAAATTACCTTCCGTAGA+AGG 0.328474 3_1:+65021054 None:intergenic
TTAATTAATTTAATTATTGT+TGG 0.337176 3_1:+65019958 None:intergenic
TTAATTAATCAATTAATTAA+GGG 0.339918 3_1:-65019943 Msa0368380:three_prime_UTR
CAGAAGCTGCCGTCGCTGCC+GGG 0.350611 3_1:-65020136 Msa0368380:CDS
CCTTCTTAAGATCTGGTTGC+CGG 0.378935 3_1:+65021145 None:intergenic
CAACAAAGGTATTAATTAAC+CGG 0.381726 3_1:-65019710 Msa0368380:three_prime_UTR
TTGTGGTAGAAGAAGAGATA+TGG 0.384132 3_1:-65020995 Msa0368380:CDS
GGCTTTGGCAAGACATAGTT+CGG 0.395382 3_1:-65020038 Msa0368380:CDS
TTTGTTGACGAAGTTGGCTT+TGG 0.396568 3_1:-65020053 Msa0368380:CDS
ACAGAAGCTGCCGTCGCTGC+CGG 0.399031 3_1:-65020137 Msa0368380:CDS
TTCTCTCCCACCCATTCTCA+TGG 0.399483 3_1:-65021449 None:intergenic
CCGGCGTTTACGAGAAGTTC+CGG 0.400169 3_1:+65021164 None:intergenic
CGAAATCGAATCTATAAGAT+TGG 0.407955 3_1:-65019661 Msa0368380:three_prime_UTR
TGGAGGGCGCGTGATCTATT+GGG 0.410207 3_1:-65020446 Msa0368380:CDS
CACATCTACATGTAACAGTT+TGG 0.412786 3_1:+65020656 None:intergenic
TCGAAATCCTTCTTAAGATC+TGG 0.418009 3_1:+65021138 None:intergenic
TCAATTATCATGTAATGTAA+TGG 0.418524 3_1:-65019841 Msa0368380:three_prime_UTR
TGACGACGGATGGTTCTGAT+AGG 0.419384 3_1:-65020096 Msa0368380:CDS
GAAGGAACGGTGAGAGAGAG+AGG 0.435691 3_1:+65021402 None:intergenic
TCCGGTGTCCCCGGCAGCGA+CGG 0.443630 3_1:+65020127 None:intergenic
GTTGAAGAGTGTCCAAAATT+CGG 0.449606 3_1:-65021030 Msa0368380:CDS
TACATTACATGATAATTGAC+AGG 0.451396 3_1:+65019845 None:intergenic
TTTCGATTATAGACAAAGAA+AGG 0.452370 3_1:+65019679 None:intergenic
TTAATTAAGGGCGGTGAGAA+AGG 0.453120 3_1:-65019931 Msa0368380:three_prime_UTR
CAATTATCATGTAATGTAAT+GGG 0.453575 3_1:-65019840 Msa0368380:three_prime_UTR
TTCGGTGTTACTTCAGTTTG+TGG 0.455399 3_1:-65021012 Msa0368380:CDS
TCCAAATTCCGGCGCCGGGA+GGG 0.471151 3_1:+65021222 None:intergenic
GGTTCTTGTGAAGAGAAAGA+AGG 0.475214 3_1:+65020952 None:intergenic
AAGCAATGGACCCATGAGAA+TGG 0.477694 3_1:+65021438 None:intergenic
ACAAAGAAAGGTGTGTCAAC+CGG 0.481889 3_1:+65019691 None:intergenic
GCCCTCCAGCCGCTTCGACT+CGG 0.483374 3_1:+65020461 None:intergenic
GCAACAAGGCTTTGCTCGCA+TGG 0.484219 3_1:-65020710 Msa0368380:CDS
TTGCTCCGAGTCGAAGCGGC+TGG 0.488328 3_1:-65020466 Msa0368380:CDS
GTGTGGTGGTGATTGATTTG+AGG 0.488649 3_1:-65020006 Msa0368380:CDS
AGCAATTCATCGGGTCGATC+CGG 0.489756 3_1:+65020484 None:intergenic
TGGGATGGTCCAAGAGTCCT+TGG 0.490045 3_1:-65020427 Msa0368380:CDS
CGTTCCGTTACCGTTACCTC+AGG 0.490802 3_1:+65020259 None:intergenic
GCAAGTACTCCAAGGACTCT+TGG 0.490900 3_1:+65020418 None:intergenic
TTCGACTCGGAGCAATTCAT+CGG 0.491804 3_1:+65020474 None:intergenic
GTTCACGTCCCTCCCGGCGC+CGG 0.501266 3_1:-65021230 Msa0368380:CDS
ATGGTAGTAAGTCCAAATTC+CGG 0.501602 3_1:+65021211 None:intergenic
CTCCGAGTCGAAGCGGCTGG+AGG 0.504826 3_1:-65020463 Msa0368380:CDS
TACATCGCCGACATGGCGTC+CGG 0.508772 3_1:-65021183 Msa0368380:CDS
GCCGTCGCTGCCGGGGACAC+CGG 0.510962 3_1:-65020128 Msa0368380:CDS
TGAGAGAGAGAGGATGAAAG+AGG 0.511680 3_1:+65021412 None:intergenic
AGAAGCTGCCGTCGCTGCCG+GGG 0.515882 3_1:-65020135 Msa0368380:CDS
TCTTTCCTCCGATCATAAGC+CGG 0.517809 3_1:-65020503 Msa0368380:CDS
TATCATGTAATGTAATGGGA+TGG 0.519697 3_1:-65019836 Msa0368380:three_prime_UTR
AGCAATGGACCCATGAGAAT+GGG 0.521705 3_1:+65021439 None:intergenic
TAAGTCCAAATTCCGGCGCC+GGG 0.526065 3_1:+65021218 None:intergenic
GAGGAATAGCAACGCCGCTA+CGG 0.531063 3_1:+65020524 None:intergenic
TCAGGCTCAGATATCACATA+AGG 0.533412 3_1:+65020277 None:intergenic
CTTGCCATGTCTAGAGCCAT+AGG 0.533980 3_1:-65020400 Msa0368380:intron
TGTTGTAAGGATGTGTTTGA+AGG 0.534394 3_1:-65020161 Msa0368380:CDS
GTAAGTCCAAATTCCGGCGC+CGG 0.536382 3_1:+65021217 None:intergenic
GGAATGTGTTGTGGTGTTGT+CGG 0.536644 3_1:-65021273 Msa0368380:CDS
GATGAAAGAGGAGGAAGCAA+TGG 0.538789 3_1:+65021424 None:intergenic
CGGCGAGTTCACGTCCCTCC+CGG 0.540502 3_1:-65021236 Msa0368380:CDS
TGATAAAGAAAAGCCTTCTA+CGG 0.540988 3_1:-65021067 Msa0368380:CDS
ACACAGCTTGTGGTGTTGTA+AGG 0.542876 3_1:-65020174 Msa0368380:CDS
TCTCTCCCACCCATTCTCAT+GGG 0.545619 3_1:-65021448 None:intergenic
ATCATGTAATGTAATGGGAT+GGG 0.548896 3_1:-65019835 Msa0368380:three_prime_UTR
TGTTGTGGTGTTGTCGGAGA+AGG 0.549714 3_1:-65021267 Msa0368380:CDS
TCCGAGTCGAAGCGGCTGGA+GGG 0.554311 3_1:-65020462 Msa0368380:CDS
TGGACGATGAAGTTCAAAGA+TGG 0.557447 3_1:-65020690 Msa0368380:CDS
AAAGAAAAGCCTTCTACGGA+AGG 0.558816 3_1:-65021063 Msa0368380:CDS
AAAACACCGAAGTAGTGAAA+AGG 0.560512 3_1:+65020931 None:intergenic
ACTCCTCACTGTGATGCTGT+TGG 0.560714 3_1:-65020625 Msa0368380:CDS
ATTATGGCTGGAATGTGTTG+TGG 0.564647 3_1:-65021282 Msa0368380:CDS
TCGACTCGGAGCAATTCATC+GGG 0.565795 3_1:+65020475 None:intergenic
ATTTAGAACAAAACTTAACT+CGG 0.567159 3_1:-65019574 Msa0368380:three_prime_UTR
AAAATTATCGTCTCAAACTG+TGG 0.567276 3_1:-65020568 Msa0368380:CDS
CGTCAACAAAATTGAAGCAT+CGG 0.569155 3_1:+65020066 None:intergenic
ATGTCGGCGATGTATTTGAA+TGG 0.578204 3_1:+65021192 None:intergenic
GAAAACGAGGTGACGACGGA+TGG 0.579693 3_1:-65020106 Msa0368380:CDS
GGGTCGATCCGGCTTATGAT+CGG 0.579727 3_1:+65020495 None:intergenic
ATTCAAATACATCGCCGACA+TGG 0.580427 3_1:-65021190 Msa0368380:CDS
AACGCCGCTACGGCAAAGAA+CGG 0.583085 3_1:+65020534 None:intergenic
GATATCTGAGCCTGAGGTAA+CGG 0.584421 3_1:-65020269 Msa0368380:CDS
CGGGAGGGACGTGAACTCGC+CGG 0.591475 3_1:+65021237 None:intergenic
AATGGACCCATGAGAATGGG+TGG 0.593984 3_1:+65021442 None:intergenic
GGGAAAATTTGTGTCAACAA+AGG 0.594315 3_1:-65019724 Msa0368380:three_prime_UTR
GGCTTATGATCGGAGGAAAG+AGG 0.597269 3_1:+65020505 None:intergenic
GTCCAAATTCCGGCGCCGGG+AGG 0.598614 3_1:+65021221 None:intergenic
CCCATAGTCCATCACTCGCT+AGG 0.599236 3_1:+65020212 None:intergenic
CTCACCTATGGCTCTAGACA+TGG 0.599722 3_1:+65020396 None:intergenic
GAGAGAGAGGATGAAAGAGG+AGG 0.601955 3_1:+65021415 None:intergenic
CCGGCAACCAGATCTTAAGA+AGG 0.602537 3_1:-65021145 Msa0368380:CDS
CCTAGCGAGTGATGGACTAT+GGG 0.603792 3_1:-65020212 Msa0368380:CDS
GACGACGGATGGTTCTGATA+GGG 0.604150 3_1:-65020095 Msa0368380:CDS
TGTCGGAGAAGGTGACTCAC+CGG 0.606589 3_1:-65021256 Msa0368380:CDS
AGAGCCGTTCTTTGCCGTAG+CGG 0.606690 3_1:-65020538 Msa0368380:CDS
TGAGCCTGAGGTAACGGTAA+CGG 0.607863 3_1:-65020263 Msa0368380:CDS
TGTTTGATCCTAGCGAGTGA+TGG 0.608748 3_1:-65020220 Msa0368380:CDS
AGGATGTGGAGAAAATGGAA+TGG 0.611587 3_1:-65019883 Msa0368380:three_prime_UTR
GAGACTTCACGAAATTGTGA+AGG 0.612907 3_1:-65020779 Msa0368380:CDS
ACCGGAAAACGAGGTGACGA+CGG 0.614531 3_1:-65020110 Msa0368380:CDS
AGAAGTTCCGGACGCCATGT+CGG 0.617679 3_1:+65021176 None:intergenic
ATTAATCAATTAATTAAGGG+CGG 0.618802 3_1:-65019940 Msa0368380:three_prime_UTR
TTATGTGATATCTGAGCCTG+AGG 0.624755 3_1:-65020275 Msa0368380:CDS
TAGACATGGCAAGTACTCCA+AGG 0.628683 3_1:+65020410 None:intergenic
GGGCGCGTGATCTATTGGGA+TGG 0.628862 3_1:-65020442 Msa0368380:CDS
GCGAGCAAAGCCTTGTTGCA+TGG 0.634973 3_1:+65020714 None:intergenic
GACAACGGCAACAACAGCTG+TGG 0.638597 3_1:+65020600 None:intergenic
GCCGGGGACACCGGAAAACG+AGG 0.642141 3_1:-65020119 Msa0368380:CDS
TGAATTGCTCCGAGTCGAAG+CGG 0.644062 3_1:-65020470 Msa0368380:CDS
ATGGACCCATGAGAATGGGT+GGG 0.654858 3_1:+65021443 None:intergenic
GTTTCAAATGACACAGCTTG+TGG 0.656333 3_1:-65020184 Msa0368380:CDS
TGGAACAACACCATGCAACA+AGG 0.659515 3_1:-65020724 Msa0368380:CDS
TTCGGATAATGTTAGTGTGG+TGG 0.663276 3_1:-65020020 Msa0368380:CDS
CCGGAACTTCTCGTAAACGC+CGG 0.665427 3_1:-65021164 Msa0368380:CDS
TCGATCCGGCTTATGATCGG+AGG 0.674358 3_1:+65020498 None:intergenic
AAGCTCAAGAGAATTTAGAG+TGG 0.674587 3_1:-65020744 Msa0368380:CDS
TAGTTCGGATAATGTTAGTG+TGG 0.677611 3_1:-65020023 Msa0368380:CDS
GATCCAACAGCATCACAGTG+AGG 0.730432 3_1:+65020622 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGAAAAAAAATGAATGA+AGG + chr3_1:65019633-65019652 None:intergenic 15.0%
!!! TAATGAAATGAAACATTTTA+AGG - chr3_1:65021111-65021130 Msa0368380:CDS 15.0%
!! ACAAAAAAAAAAATTAGTGT+AGG - chr3_1:65021269-65021288 Msa0368380:CDS 15.0%
!! CAAAAAAAAAAATTAGTGTA+GGG - chr3_1:65021270-65021289 Msa0368380:CDS 15.0%
!! ATATGAAAAAAAATGAATGA+AGG + chr3_1:65019633-65019652 None:intergenic 15.0%
!!! TAATGAAATGAAACATTTTA+AGG - chr3_1:65021111-65021130 Msa0368380:CDS 15.0%
!! ACAAAAAAAAAAATTAGTGT+AGG - chr3_1:65021269-65021288 Msa0368380:CDS 15.0%
!! CAAAAAAAAAAATTAGTGTA+GGG - chr3_1:65021270-65021289 Msa0368380:CDS 15.0%
!! AAAAAAAATGAATGAAGGAA+CGG + chr3_1:65019628-65019647 None:intergenic 20.0%
!!! ATTGTTGAAGTTTTTCATTA+TGG - chr3_1:65019716-65019735 Msa0368380:three_prime_UTR 20.0%
!!! GTAAGTATTTTTCTTTTTTC+CGG - chr3_1:65020128-65020147 Msa0368380:CDS 20.0%
!! ATTAATCAATTAATTAAGGG+CGG - chr3_1:65021074-65021093 Msa0368380:CDS 20.0%
!! TCAATTATCATGTAATGTAA+TGG - chr3_1:65021173-65021192 Msa0368380:CDS 20.0%
!! CAATTATCATGTAATGTAAT+GGG - chr3_1:65021174-65021193 Msa0368380:CDS 20.0%
!!! ATTTAGAACAAAACTTAACT+CGG - chr3_1:65021440-65021459 Msa0368380:five_prime_UTR 20.0%
!! AAAAAAAATGAATGAAGGAA+CGG + chr3_1:65019628-65019647 None:intergenic 20.0%
!!! ATTGTTGAAGTTTTTCATTA+TGG - chr3_1:65019716-65019735 Msa0368380:three_prime_UTR 20.0%
!!! GTAAGTATTTTTCTTTTTTC+CGG - chr3_1:65020128-65020147 Msa0368380:CDS 20.0%
!! ATTAATCAATTAATTAAGGG+CGG - chr3_1:65021074-65021093 Msa0368380:CDS 20.0%
!! TCAATTATCATGTAATGTAA+TGG - chr3_1:65021173-65021192 Msa0368380:CDS 20.0%
!! CAATTATCATGTAATGTAAT+GGG - chr3_1:65021174-65021193 Msa0368380:CDS 20.0%
! CAAAAGTAAGAAAAACAAGA+AGG - chr3_1:65019923-65019942 Msa0368380:three_prime_UTR 25.0%
!!! GCTTTGTTGTTAATTTTTTC+AGG - chr3_1:65020193-65020212 Msa0368380:CDS 25.0%
! TTTGATAAAATACTCACCTA+TGG + chr3_1:65020633-65020652 None:intergenic 25.0%
!!! ATGTTTGTATTCTTTTTTGC+AGG - chr3_1:65020698-65020717 Msa0368380:CDS 25.0%
!!! AATGAAACATTTTAAGGATG+TGG - chr3_1:65021117-65021136 Msa0368380:CDS 25.0%
! TACATTACATGATAATTGAC+AGG + chr3_1:65021172-65021191 None:intergenic 25.0%
!!! CAACAAAGGTATTAATTAAC+CGG - chr3_1:65021304-65021323 Msa0368380:five_prime_UTR 25.0%
! TTTCGATTATAGACAAAGAA+AGG + chr3_1:65021338-65021357 None:intergenic 25.0%
!!! GAATCTATAAGATTGGTTTT+TGG - chr3_1:65021360-65021379 Msa0368380:five_prime_UTR 25.0%
! TGTTCTTATGAATGAACTAT+TGG - chr3_1:65021415-65021434 Msa0368380:five_prime_UTR 25.0%
! CAAAAGTAAGAAAAACAAGA+AGG - chr3_1:65019923-65019942 Msa0368380:three_prime_UTR 25.0%
!!! GCTTTGTTGTTAATTTTTTC+AGG - chr3_1:65020193-65020212 Msa0368380:CDS 25.0%
! TTTGATAAAATACTCACCTA+TGG + chr3_1:65020633-65020652 None:intergenic 25.0%
!!! ATGTTTGTATTCTTTTTTGC+AGG - chr3_1:65020698-65020717 Msa0368380:CDS 25.0%
!!! AATGAAACATTTTAAGGATG+TGG - chr3_1:65021117-65021136 Msa0368380:CDS 25.0%
! TACATTACATGATAATTGAC+AGG + chr3_1:65021172-65021191 None:intergenic 25.0%
!!! CAACAAAGGTATTAATTAAC+CGG - chr3_1:65021304-65021323 Msa0368380:five_prime_UTR 25.0%
! TTTCGATTATAGACAAAGAA+AGG + chr3_1:65021338-65021357 None:intergenic 25.0%
!!! GAATCTATAAGATTGGTTTT+TGG - chr3_1:65021360-65021379 Msa0368380:five_prime_UTR 25.0%
! TGTTCTTATGAATGAACTAT+TGG - chr3_1:65021415-65021434 Msa0368380:five_prime_UTR 25.0%
! TTGAAGTTTTTCATTATGGC+TGG - chr3_1:65019720-65019739 Msa0368380:three_prime_UTR 30.0%
TGATAAAGAAAAGCCTTCTA+CGG - chr3_1:65019947-65019966 Msa0368380:three_prime_UTR 30.0%
! GACAGATCTGTTAAATTTTC+CGG - chr3_1:65020152-65020171 Msa0368380:CDS 30.0%
! TTAAATTTTCCGGTGAATTG+CGG - chr3_1:65020162-65020181 Msa0368380:CDS 30.0%
!! TTTGAGACGATAATTTTGTC+TGG + chr3_1:65020443-65020462 None:intergenic 30.0%
AAAATTATCGTCTCAAACTG+TGG - chr3_1:65020446-65020465 Msa0368380:CDS 30.0%
! GGTGAGTATTTTATCAAAGT+CGG - chr3_1:65020635-65020654 Msa0368380:CDS 30.0%
! TTCAATTTTGTTGACGAAGT+TGG - chr3_1:65020955-65020974 Msa0368380:CDS 30.0%
!! TTTTAAGGATGTGGAGAAAA+TGG - chr3_1:65021126-65021145 Msa0368380:CDS 30.0%
! TATCATGTAATGTAATGGGA+TGG - chr3_1:65021178-65021197 Msa0368380:CDS 30.0%
! ATCATGTAATGTAATGGGAT+GGG - chr3_1:65021179-65021198 Msa0368380:CDS 30.0%
CGAAATCGAATCTATAAGAT+TGG - chr3_1:65021353-65021372 Msa0368380:five_prime_UTR 30.0%
!!! CTATAAGATTGGTTTTTGGT+TGG - chr3_1:65021364-65021383 Msa0368380:five_prime_UTR 30.0%
! TTGAAGTTTTTCATTATGGC+TGG - chr3_1:65019720-65019739 Msa0368380:three_prime_UTR 30.0%
TGATAAAGAAAAGCCTTCTA+CGG - chr3_1:65019947-65019966 Msa0368380:three_prime_UTR 30.0%
! GACAGATCTGTTAAATTTTC+CGG - chr3_1:65020152-65020171 Msa0368380:CDS 30.0%
! TTAAATTTTCCGGTGAATTG+CGG - chr3_1:65020162-65020181 Msa0368380:CDS 30.0%
!! TTTGAGACGATAATTTTGTC+TGG + chr3_1:65020443-65020462 None:intergenic 30.0%
AAAATTATCGTCTCAAACTG+TGG - chr3_1:65020446-65020465 Msa0368380:CDS 30.0%
! GGTGAGTATTTTATCAAAGT+CGG - chr3_1:65020635-65020654 Msa0368380:CDS 30.0%
! TTCAATTTTGTTGACGAAGT+TGG - chr3_1:65020955-65020974 Msa0368380:CDS 30.0%
!! TTTTAAGGATGTGGAGAAAA+TGG - chr3_1:65021126-65021145 Msa0368380:CDS 30.0%
! TATCATGTAATGTAATGGGA+TGG - chr3_1:65021178-65021197 Msa0368380:CDS 30.0%
! ATCATGTAATGTAATGGGAT+GGG - chr3_1:65021179-65021198 Msa0368380:CDS 30.0%
CGAAATCGAATCTATAAGAT+TGG - chr3_1:65021353-65021372 Msa0368380:five_prime_UTR 30.0%
!!! CTATAAGATTGGTTTTTGGT+TGG - chr3_1:65021364-65021383 Msa0368380:five_prime_UTR 30.0%
ATGGTAGTAAGTCCAAATTC+CGG + chr3_1:65019806-65019825 None:intergenic 35.0%
TCGAAATCCTTCTTAAGATC+TGG + chr3_1:65019879-65019898 None:intergenic 35.0%
!! GTTGAAGAGTGTCCAAAATT+CGG - chr3_1:65019984-65020003 Msa0368380:CDS 35.0%
! ACTGAAGTAACACCGAATTT+TGG + chr3_1:65019999-65020018 None:intergenic 35.0%
TTGTGGTAGAAGAAGAGATA+TGG - chr3_1:65020019-65020038 Msa0368380:CDS 35.0%
! CAAGAACCTTTTCACTACTT+CGG - chr3_1:65020077-65020096 Msa0368380:CDS 35.0%
AAAACACCGAAGTAGTGAAA+AGG + chr3_1:65020086-65020105 None:intergenic 35.0%
AAATTTAACAGATCTGTCGC+CGG + chr3_1:65020150-65020169 None:intergenic 35.0%
AAGCTCAAGAGAATTTAGAG+TGG - chr3_1:65020270-65020289 Msa0368380:CDS 35.0%
CACATCTACATGTAACAGTT+TGG + chr3_1:65020361-65020380 None:intergenic 35.0%
!! AATTTTGTCTGGAGTGACAA+CGG + chr3_1:65020432-65020451 None:intergenic 35.0%
TGTTGTAAGGATGTGTTTGA+AGG - chr3_1:65020853-65020872 Msa0368380:intron 35.0%
CGTCAACAAAATTGAAGCAT+CGG + chr3_1:65020951-65020970 None:intergenic 35.0%
TAGTTCGGATAATGTTAGTG+TGG - chr3_1:65020991-65021010 Msa0368380:CDS 35.0%
! ATGTAATGGGATGGGAATTT+AGG - chr3_1:65021187-65021206 Msa0368380:CDS 35.0%
GGGAAAATTTGTGTCAACAA+AGG - chr3_1:65021290-65021309 Msa0368380:exon 35.0%
!!! GATTGGTTTTTGGTTGGTAA+TGG - chr3_1:65021370-65021389 Msa0368380:five_prime_UTR 35.0%
ATGGTAGTAAGTCCAAATTC+CGG + chr3_1:65019806-65019825 None:intergenic 35.0%
TCGAAATCCTTCTTAAGATC+TGG + chr3_1:65019879-65019898 None:intergenic 35.0%
!! GTTGAAGAGTGTCCAAAATT+CGG - chr3_1:65019984-65020003 Msa0368380:CDS 35.0%
! ACTGAAGTAACACCGAATTT+TGG + chr3_1:65019999-65020018 None:intergenic 35.0%
TTGTGGTAGAAGAAGAGATA+TGG - chr3_1:65020019-65020038 Msa0368380:CDS 35.0%
! CAAGAACCTTTTCACTACTT+CGG - chr3_1:65020077-65020096 Msa0368380:CDS 35.0%
AAAACACCGAAGTAGTGAAA+AGG + chr3_1:65020086-65020105 None:intergenic 35.0%
AAATTTAACAGATCTGTCGC+CGG + chr3_1:65020150-65020169 None:intergenic 35.0%
AAGCTCAAGAGAATTTAGAG+TGG - chr3_1:65020270-65020289 Msa0368380:CDS 35.0%
CACATCTACATGTAACAGTT+TGG + chr3_1:65020361-65020380 None:intergenic 35.0%
!! AATTTTGTCTGGAGTGACAA+CGG + chr3_1:65020432-65020451 None:intergenic 35.0%
TGTTGTAAGGATGTGTTTGA+AGG - chr3_1:65020853-65020872 Msa0368380:intron 35.0%
CGTCAACAAAATTGAAGCAT+CGG + chr3_1:65020951-65020970 None:intergenic 35.0%
TAGTTCGGATAATGTTAGTG+TGG - chr3_1:65020991-65021010 Msa0368380:CDS 35.0%
! ATGTAATGGGATGGGAATTT+AGG - chr3_1:65021187-65021206 Msa0368380:CDS 35.0%
GGGAAAATTTGTGTCAACAA+AGG - chr3_1:65021290-65021309 Msa0368380:exon 35.0%
!!! GATTGGTTTTTGGTTGGTAA+TGG - chr3_1:65021370-65021389 Msa0368380:five_prime_UTR 35.0%
ATTATGGCTGGAATGTGTTG+TGG - chr3_1:65019732-65019751 Msa0368380:three_prime_UTR 40.0%
ATGTCGGCGATGTATTTGAA+TGG + chr3_1:65019825-65019844 None:intergenic 40.0%
ATTCAAATACATCGCCGACA+TGG - chr3_1:65019824-65019843 Msa0368380:three_prime_UTR 40.0%
AAAGAAAAGCCTTCTACGGA+AGG - chr3_1:65019951-65019970 Msa0368380:exon 40.0%
TCGAAATTACCTTCCGTAGA+AGG + chr3_1:65019963-65019982 None:intergenic 40.0%
!! TTCGGTGTTACTTCAGTTTG+TGG - chr3_1:65020002-65020021 Msa0368380:CDS 40.0%
GGTTCTTGTGAAGAGAAAGA+AGG + chr3_1:65020065-65020084 None:intergenic 40.0%
CAATTAACACCGCAATTCAC+CGG + chr3_1:65020174-65020193 None:intergenic 40.0%
GAGACTTCACGAAATTGTGA+AGG - chr3_1:65020235-65020254 Msa0368380:CDS 40.0%
TGGACGATGAAGTTCAAAGA+TGG - chr3_1:65020324-65020343 Msa0368380:intron 40.0%
TCAGGCTCAGATATCACATA+AGG + chr3_1:65020740-65020759 None:intergenic 40.0%
TTATGTGATATCTGAGCCTG+AGG - chr3_1:65020739-65020758 Msa0368380:CDS 40.0%
GTTTCAAATGACACAGCTTG+TGG - chr3_1:65020830-65020849 Msa0368380:intron 40.0%
! TTTGTTGACGAAGTTGGCTT+TGG - chr3_1:65020961-65020980 Msa0368380:CDS 40.0%
TTCGGATAATGTTAGTGTGG+TGG - chr3_1:65020994-65021013 Msa0368380:CDS 40.0%
TTAATTAAGGGCGGTGAGAA+AGG - chr3_1:65021083-65021102 Msa0368380:CDS 40.0%
AGGATGTGGAGAAAATGGAA+TGG - chr3_1:65021131-65021150 Msa0368380:CDS 40.0%
! ACAAAGAAAGGTGTGTCAAC+CGG + chr3_1:65021326-65021345 None:intergenic 40.0%
ATTATGGCTGGAATGTGTTG+TGG - chr3_1:65019732-65019751 Msa0368380:three_prime_UTR 40.0%
ATGTCGGCGATGTATTTGAA+TGG + chr3_1:65019825-65019844 None:intergenic 40.0%
ATTCAAATACATCGCCGACA+TGG - chr3_1:65019824-65019843 Msa0368380:three_prime_UTR 40.0%
AAAGAAAAGCCTTCTACGGA+AGG - chr3_1:65019951-65019970 Msa0368380:exon 40.0%
TCGAAATTACCTTCCGTAGA+AGG + chr3_1:65019963-65019982 None:intergenic 40.0%
!! TTCGGTGTTACTTCAGTTTG+TGG - chr3_1:65020002-65020021 Msa0368380:CDS 40.0%
GGTTCTTGTGAAGAGAAAGA+AGG + chr3_1:65020065-65020084 None:intergenic 40.0%
CAATTAACACCGCAATTCAC+CGG + chr3_1:65020174-65020193 None:intergenic 40.0%
GAGACTTCACGAAATTGTGA+AGG - chr3_1:65020235-65020254 Msa0368380:CDS 40.0%
TGGACGATGAAGTTCAAAGA+TGG - chr3_1:65020324-65020343 Msa0368380:intron 40.0%
TCAGGCTCAGATATCACATA+AGG + chr3_1:65020740-65020759 None:intergenic 40.0%
TTATGTGATATCTGAGCCTG+AGG - chr3_1:65020739-65020758 Msa0368380:CDS 40.0%
GTTTCAAATGACACAGCTTG+TGG - chr3_1:65020830-65020849 Msa0368380:intron 40.0%
! TTTGTTGACGAAGTTGGCTT+TGG - chr3_1:65020961-65020980 Msa0368380:CDS 40.0%
TTCGGATAATGTTAGTGTGG+TGG - chr3_1:65020994-65021013 Msa0368380:CDS 40.0%
TTAATTAAGGGCGGTGAGAA+AGG - chr3_1:65021083-65021102 Msa0368380:CDS 40.0%
AGGATGTGGAGAAAATGGAA+TGG - chr3_1:65021131-65021150 Msa0368380:CDS 40.0%
! ACAAAGAAAGGTGTGTCAAC+CGG + chr3_1:65021326-65021345 None:intergenic 40.0%
AGCAATGGACCCATGAGAAT+GGG + chr3_1:65019578-65019597 None:intergenic 45.0%
AAGCAATGGACCCATGAGAA+TGG + chr3_1:65019579-65019598 None:intergenic 45.0%
GATGAAAGAGGAGGAAGCAA+TGG + chr3_1:65019593-65019612 None:intergenic 45.0%
TGAGAGAGAGAGGATGAAAG+AGG + chr3_1:65019605-65019624 None:intergenic 45.0%
!! GGAATGTGTTGTGGTGTTGT+CGG - chr3_1:65019741-65019760 Msa0368380:three_prime_UTR 45.0%
CCTTCTTAAGATCTGGTTGC+CGG + chr3_1:65019872-65019891 None:intergenic 45.0%
!!! CACTACTTCGGTGTTTTCGA+CGG - chr3_1:65020089-65020108 Msa0368380:CDS 45.0%
TGGAACAACACCATGCAACA+AGG - chr3_1:65020290-65020309 Msa0368380:CDS 45.0%
TCTTTCCTCCGATCATAAGC+CGG - chr3_1:65020511-65020530 Msa0368380:CDS 45.0%
!! TTCGACTCGGAGCAATTCAT+CGG + chr3_1:65020543-65020562 None:intergenic 45.0%
TAGACATGGCAAGTACTCCA+AGG + chr3_1:65020607-65020626 None:intergenic 45.0%
GATATCTGAGCCTGAGGTAA+CGG - chr3_1:65020745-65020764 Msa0368380:CDS 45.0%
TGTTTGATCCTAGCGAGTGA+TGG - chr3_1:65020794-65020813 Msa0368380:CDS 45.0%
!! ACACAGCTTGTGGTGTTGTA+AGG - chr3_1:65020840-65020859 Msa0368380:intron 45.0%
! GGCTTTGGCAAGACATAGTT+CGG - chr3_1:65020976-65020995 Msa0368380:CDS 45.0%
!! GTGTGGTGGTGATTGATTTG+AGG - chr3_1:65021008-65021027 Msa0368380:CDS 45.0%
AGCAATGGACCCATGAGAAT+GGG + chr3_1:65019578-65019597 None:intergenic 45.0%
AAGCAATGGACCCATGAGAA+TGG + chr3_1:65019579-65019598 None:intergenic 45.0%
GATGAAAGAGGAGGAAGCAA+TGG + chr3_1:65019593-65019612 None:intergenic 45.0%
TGAGAGAGAGAGGATGAAAG+AGG + chr3_1:65019605-65019624 None:intergenic 45.0%
!! GGAATGTGTTGTGGTGTTGT+CGG - chr3_1:65019741-65019760 Msa0368380:three_prime_UTR 45.0%
CCTTCTTAAGATCTGGTTGC+CGG + chr3_1:65019872-65019891 None:intergenic 45.0%
!!! CACTACTTCGGTGTTTTCGA+CGG - chr3_1:65020089-65020108 Msa0368380:CDS 45.0%
TGGAACAACACCATGCAACA+AGG - chr3_1:65020290-65020309 Msa0368380:CDS 45.0%
TCTTTCCTCCGATCATAAGC+CGG - chr3_1:65020511-65020530 Msa0368380:CDS 45.0%
!! TTCGACTCGGAGCAATTCAT+CGG + chr3_1:65020543-65020562 None:intergenic 45.0%
TAGACATGGCAAGTACTCCA+AGG + chr3_1:65020607-65020626 None:intergenic 45.0%
GATATCTGAGCCTGAGGTAA+CGG - chr3_1:65020745-65020764 Msa0368380:CDS 45.0%
TGTTTGATCCTAGCGAGTGA+TGG - chr3_1:65020794-65020813 Msa0368380:CDS 45.0%
!! ACACAGCTTGTGGTGTTGTA+AGG - chr3_1:65020840-65020859 Msa0368380:intron 45.0%
! GGCTTTGGCAAGACATAGTT+CGG - chr3_1:65020976-65020995 Msa0368380:CDS 45.0%
!! GTGTGGTGGTGATTGATTTG+AGG - chr3_1:65021008-65021027 Msa0368380:CDS 45.0%
!! TTAATTAATTTAATTATTGT+TGG + chr3_1:65021059-65021078 None:intergenic 5.0%
!! ATTAATTAATCAATTAATTA+AGG - chr3_1:65021070-65021089 Msa0368380:CDS 5.0%
!! TTAATTAATCAATTAATTAA+GGG - chr3_1:65021071-65021090 Msa0368380:CDS 5.0%
!! TTAATTAATTTAATTATTGT+TGG + chr3_1:65021059-65021078 None:intergenic 5.0%
!! ATTAATTAATCAATTAATTA+AGG - chr3_1:65021070-65021089 Msa0368380:CDS 5.0%
!! TTAATTAATCAATTAATTAA+GGG - chr3_1:65021071-65021090 Msa0368380:CDS 5.0%
GAGAGAGAGGATGAAAGAGG+AGG + chr3_1:65019602-65019621 None:intergenic 50.0%
!! TGTTGTGGTGTTGTCGGAGA+AGG - chr3_1:65019747-65019766 Msa0368380:three_prime_UTR 50.0%
CCGGCAACCAGATCTTAAGA+AGG - chr3_1:65019869-65019888 Msa0368380:three_prime_UTR 50.0%
!!! TTCGGTGTTTTCGACGGTCA+CGG - chr3_1:65020095-65020114 Msa0368380:CDS 50.0%
ACTCCTCACTGTGATGCTGT+TGG - chr3_1:65020389-65020408 Msa0368380:intron 50.0%
GATCCAACAGCATCACAGTG+AGG + chr3_1:65020395-65020414 None:intergenic 50.0%
GGCTTATGATCGGAGGAAAG+AGG + chr3_1:65020512-65020531 None:intergenic 50.0%
AGCAATTCATCGGGTCGATC+CGG + chr3_1:65020533-65020552 None:intergenic 50.0%
!! TCGACTCGGAGCAATTCATC+GGG + chr3_1:65020542-65020561 None:intergenic 50.0%
TGAATTGCTCCGAGTCGAAG+CGG - chr3_1:65020544-65020563 Msa0368380:CDS 50.0%
GCAAGTACTCCAAGGACTCT+TGG + chr3_1:65020599-65020618 None:intergenic 50.0%
! CTTGCCATGTCTAGAGCCAT+AGG - chr3_1:65020614-65020633 Msa0368380:CDS 50.0%
!! CTCACCTATGGCTCTAGACA+TGG + chr3_1:65020621-65020640 None:intergenic 50.0%
! TGAGCCTGAGGTAACGGTAA+CGG - chr3_1:65020751-65020770 Msa0368380:CDS 50.0%
!! TCCTAGCGAGTGATGGACTA+TGG - chr3_1:65020801-65020820 Msa0368380:CDS 50.0%
!! CCTAGCGAGTGATGGACTAT+GGG - chr3_1:65020802-65020821 Msa0368380:CDS 50.0%
!! TGACGACGGATGGTTCTGAT+AGG - chr3_1:65020918-65020937 Msa0368380:CDS 50.0%
!! GACGACGGATGGTTCTGATA+GGG - chr3_1:65020919-65020938 Msa0368380:CDS 50.0%
GAGAGAGAGGATGAAAGAGG+AGG + chr3_1:65019602-65019621 None:intergenic 50.0%
!! TGTTGTGGTGTTGTCGGAGA+AGG - chr3_1:65019747-65019766 Msa0368380:three_prime_UTR 50.0%
CCGGCAACCAGATCTTAAGA+AGG - chr3_1:65019869-65019888 Msa0368380:three_prime_UTR 50.0%
!!! TTCGGTGTTTTCGACGGTCA+CGG - chr3_1:65020095-65020114 Msa0368380:CDS 50.0%
ACTCCTCACTGTGATGCTGT+TGG - chr3_1:65020389-65020408 Msa0368380:intron 50.0%
GATCCAACAGCATCACAGTG+AGG + chr3_1:65020395-65020414 None:intergenic 50.0%
GGCTTATGATCGGAGGAAAG+AGG + chr3_1:65020512-65020531 None:intergenic 50.0%
AGCAATTCATCGGGTCGATC+CGG + chr3_1:65020533-65020552 None:intergenic 50.0%
!! TCGACTCGGAGCAATTCATC+GGG + chr3_1:65020542-65020561 None:intergenic 50.0%
TGAATTGCTCCGAGTCGAAG+CGG - chr3_1:65020544-65020563 Msa0368380:CDS 50.0%
GCAAGTACTCCAAGGACTCT+TGG + chr3_1:65020599-65020618 None:intergenic 50.0%
! CTTGCCATGTCTAGAGCCAT+AGG - chr3_1:65020614-65020633 Msa0368380:CDS 50.0%
!! CTCACCTATGGCTCTAGACA+TGG + chr3_1:65020621-65020640 None:intergenic 50.0%
! TGAGCCTGAGGTAACGGTAA+CGG - chr3_1:65020751-65020770 Msa0368380:CDS 50.0%
!! TCCTAGCGAGTGATGGACTA+TGG - chr3_1:65020801-65020820 Msa0368380:CDS 50.0%
!! CCTAGCGAGTGATGGACTAT+GGG - chr3_1:65020802-65020821 Msa0368380:CDS 50.0%
!! TGACGACGGATGGTTCTGAT+AGG - chr3_1:65020918-65020937 Msa0368380:CDS 50.0%
!! GACGACGGATGGTTCTGATA+GGG - chr3_1:65020919-65020938 Msa0368380:CDS 50.0%
GAAGGAACGGTGAGAGAGAG+AGG + chr3_1:65019615-65019634 None:intergenic 55.0%
TGTCGGAGAAGGTGACTCAC+CGG - chr3_1:65019758-65019777 Msa0368380:three_prime_UTR 55.0%
TAAGTCCAAATTCCGGCGCC+GGG + chr3_1:65019799-65019818 None:intergenic 55.0%
GTAAGTCCAAATTCCGGCGC+CGG + chr3_1:65019800-65019819 None:intergenic 55.0%
AGAAGTTCCGGACGCCATGT+CGG + chr3_1:65019841-65019860 None:intergenic 55.0%
CCGGCGTTTACGAGAAGTTC+CGG + chr3_1:65019853-65019872 None:intergenic 55.0%
CCGGAACTTCTCGTAAACGC+CGG - chr3_1:65019850-65019869 Msa0368380:three_prime_UTR 55.0%
!! GCGAGCAAAGCCTTGTTGCA+TGG + chr3_1:65020303-65020322 None:intergenic 55.0%
GCAACAAGGCTTTGCTCGCA+TGG - chr3_1:65020304-65020323 Msa0368380:intron 55.0%
GACAACGGCAACAACAGCTG+TGG + chr3_1:65020417-65020436 None:intergenic 55.0%
AGAGCCGTTCTTTGCCGTAG+CGG - chr3_1:65020476-65020495 Msa0368380:CDS 55.0%
AACGCCGCTACGGCAAAGAA+CGG + chr3_1:65020483-65020502 None:intergenic 55.0%
GAGGAATAGCAACGCCGCTA+CGG + chr3_1:65020493-65020512 None:intergenic 55.0%
TCGATCCGGCTTATGATCGG+AGG + chr3_1:65020519-65020538 None:intergenic 55.0%
GGGTCGATCCGGCTTATGAT+CGG + chr3_1:65020522-65020541 None:intergenic 55.0%
! TGGAGGGCGCGTGATCTATT+GGG - chr3_1:65020568-65020587 Msa0368380:CDS 55.0%
TGGGATGGTCCAAGAGTCCT+TGG - chr3_1:65020587-65020606 Msa0368380:CDS 55.0%
CGTTCCGTTACCGTTACCTC+AGG + chr3_1:65020758-65020777 None:intergenic 55.0%
CCCATAGTCCATCACTCGCT+AGG + chr3_1:65020805-65020824 None:intergenic 55.0%
ACCGGAAAACGAGGTGACGA+CGG - chr3_1:65020904-65020923 Msa0368380:intron 55.0%
! TCCGTCGTCACCTCGTTTTC+CGG + chr3_1:65020908-65020927 None:intergenic 55.0%
GAAAACGAGGTGACGACGGA+TGG - chr3_1:65020908-65020927 Msa0368380:intron 55.0%
GAAGGAACGGTGAGAGAGAG+AGG + chr3_1:65019615-65019634 None:intergenic 55.0%
TGTCGGAGAAGGTGACTCAC+CGG - chr3_1:65019758-65019777 Msa0368380:three_prime_UTR 55.0%
TAAGTCCAAATTCCGGCGCC+GGG + chr3_1:65019799-65019818 None:intergenic 55.0%
GTAAGTCCAAATTCCGGCGC+CGG + chr3_1:65019800-65019819 None:intergenic 55.0%
AGAAGTTCCGGACGCCATGT+CGG + chr3_1:65019841-65019860 None:intergenic 55.0%
CCGGCGTTTACGAGAAGTTC+CGG + chr3_1:65019853-65019872 None:intergenic 55.0%
CCGGAACTTCTCGTAAACGC+CGG - chr3_1:65019850-65019869 Msa0368380:three_prime_UTR 55.0%
!! GCGAGCAAAGCCTTGTTGCA+TGG + chr3_1:65020303-65020322 None:intergenic 55.0%
GCAACAAGGCTTTGCTCGCA+TGG - chr3_1:65020304-65020323 Msa0368380:intron 55.0%
GACAACGGCAACAACAGCTG+TGG + chr3_1:65020417-65020436 None:intergenic 55.0%
AGAGCCGTTCTTTGCCGTAG+CGG - chr3_1:65020476-65020495 Msa0368380:CDS 55.0%
AACGCCGCTACGGCAAAGAA+CGG + chr3_1:65020483-65020502 None:intergenic 55.0%
GAGGAATAGCAACGCCGCTA+CGG + chr3_1:65020493-65020512 None:intergenic 55.0%
TCGATCCGGCTTATGATCGG+AGG + chr3_1:65020519-65020538 None:intergenic 55.0%
GGGTCGATCCGGCTTATGAT+CGG + chr3_1:65020522-65020541 None:intergenic 55.0%
! TGGAGGGCGCGTGATCTATT+GGG - chr3_1:65020568-65020587 Msa0368380:CDS 55.0%
TGGGATGGTCCAAGAGTCCT+TGG - chr3_1:65020587-65020606 Msa0368380:CDS 55.0%
CGTTCCGTTACCGTTACCTC+AGG + chr3_1:65020758-65020777 None:intergenic 55.0%
CCCATAGTCCATCACTCGCT+AGG + chr3_1:65020805-65020824 None:intergenic 55.0%
ACCGGAAAACGAGGTGACGA+CGG - chr3_1:65020904-65020923 Msa0368380:intron 55.0%
! TCCGTCGTCACCTCGTTTTC+CGG + chr3_1:65020908-65020927 None:intergenic 55.0%
GAAAACGAGGTGACGACGGA+TGG - chr3_1:65020908-65020927 Msa0368380:intron 55.0%
TACATCGCCGACATGGCGTC+CGG - chr3_1:65019831-65019850 Msa0368380:three_prime_UTR 60.0%
! CTGGAGGGCGCGTGATCTAT+TGG - chr3_1:65020567-65020586 Msa0368380:CDS 60.0%
GGGCGCGTGATCTATTGGGA+TGG - chr3_1:65020572-65020591 Msa0368380:CDS 60.0%
! ACCTCGTTTTCCGGTGTCCC+CGG + chr3_1:65020899-65020918 None:intergenic 60.0%
TACATCGCCGACATGGCGTC+CGG - chr3_1:65019831-65019850 Msa0368380:three_prime_UTR 60.0%
! CTGGAGGGCGCGTGATCTAT+TGG - chr3_1:65020567-65020586 Msa0368380:CDS 60.0%
GGGCGCGTGATCTATTGGGA+TGG - chr3_1:65020572-65020591 Msa0368380:CDS 60.0%
! ACCTCGTTTTCCGGTGTCCC+CGG + chr3_1:65020899-65020918 None:intergenic 60.0%
! TCCAAATTCCGGCGCCGGGA+GGG + chr3_1:65019795-65019814 None:intergenic 65.0%
TTGCTCCGAGTCGAAGCGGC+TGG - chr3_1:65020548-65020567 Msa0368380:CDS 65.0%
TCCGAGTCGAAGCGGCTGGA+GGG - chr3_1:65020552-65020571 Msa0368380:CDS 65.0%
ACAGAAGCTGCCGTCGCTGC+CGG - chr3_1:65020877-65020896 Msa0368380:intron 65.0%
! TCCAAATTCCGGCGCCGGGA+GGG + chr3_1:65019795-65019814 None:intergenic 65.0%
TTGCTCCGAGTCGAAGCGGC+TGG - chr3_1:65020548-65020567 Msa0368380:CDS 65.0%
TCCGAGTCGAAGCGGCTGGA+GGG - chr3_1:65020552-65020571 Msa0368380:CDS 65.0%
ACAGAAGCTGCCGTCGCTGC+CGG - chr3_1:65020877-65020896 Msa0368380:intron 65.0%
CGGGAGGGACGTGAACTCGC+CGG + chr3_1:65019780-65019799 None:intergenic 70.0%
CGGCGAGTTCACGTCCCTCC+CGG - chr3_1:65019778-65019797 Msa0368380:three_prime_UTR 70.0%
! TCCCTCCCGGCGCCGGAATT+TGG - chr3_1:65019791-65019810 Msa0368380:three_prime_UTR 70.0%
! GTCCAAATTCCGGCGCCGGG+AGG + chr3_1:65019796-65019815 None:intergenic 70.0%
CTCCGAGTCGAAGCGGCTGG+AGG - chr3_1:65020551-65020570 Msa0368380:CDS 70.0%
GCCCTCCAGCCGCTTCGACT+CGG + chr3_1:65020556-65020575 None:intergenic 70.0%
CAGAAGCTGCCGTCGCTGCC+GGG - chr3_1:65020878-65020897 Msa0368380:intron 70.0%
AGAAGCTGCCGTCGCTGCCG+GGG - chr3_1:65020879-65020898 Msa0368380:intron 70.0%
GCCGGGGACACCGGAAAACG+AGG - chr3_1:65020895-65020914 Msa0368380:intron 70.0%
CGGGAGGGACGTGAACTCGC+CGG + chr3_1:65019780-65019799 None:intergenic 70.0%
CGGCGAGTTCACGTCCCTCC+CGG - chr3_1:65019778-65019797 Msa0368380:three_prime_UTR 70.0%
! TCCCTCCCGGCGCCGGAATT+TGG - chr3_1:65019791-65019810 Msa0368380:three_prime_UTR 70.0%
! GTCCAAATTCCGGCGCCGGG+AGG + chr3_1:65019796-65019815 None:intergenic 70.0%
CTCCGAGTCGAAGCGGCTGG+AGG - chr3_1:65020551-65020570 Msa0368380:CDS 70.0%
GCCCTCCAGCCGCTTCGACT+CGG + chr3_1:65020556-65020575 None:intergenic 70.0%
CAGAAGCTGCCGTCGCTGCC+GGG - chr3_1:65020878-65020897 Msa0368380:intron 70.0%
AGAAGCTGCCGTCGCTGCCG+GGG - chr3_1:65020879-65020898 Msa0368380:intron 70.0%
GCCGGGGACACCGGAAAACG+AGG - chr3_1:65020895-65020914 Msa0368380:intron 70.0%
GTTCACGTCCCTCCCGGCGC+CGG - chr3_1:65019784-65019803 Msa0368380:three_prime_UTR 75.0%
TCCGGTGTCCCCGGCAGCGA+CGG + chr3_1:65020890-65020909 None:intergenic 75.0%
GTTCACGTCCCTCCCGGCGC+CGG - chr3_1:65019784-65019803 Msa0368380:three_prime_UTR 75.0%
TCCGGTGTCCCCGGCAGCGA+CGG + chr3_1:65020890-65020909 None:intergenic 75.0%
! GCCGTCGCTGCCGGGGACAC+CGG - chr3_1:65020886-65020905 Msa0368380:intron 80.0%
! GCCGTCGCTGCCGGGGACAC+CGG - chr3_1:65020886-65020905 Msa0368380:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 65019574 65021462 65019574 ID=Msa0368380;Name=Msa0368380
chr3_1 mRNA 65019574 65021462 65019574 ID=Msa0368380-mRNA-1;Parent=Msa0368380;Name=Msa0368380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=161|1|1|1|1|1|3|393|387
chr3_1 exon 65019574 65020316 65019574 ID=Msa0368380-mRNA-1:exon:12997;Parent=Msa0368380-mRNA-1
chr3_1 exon 65020401 65020821 65020401 ID=Msa0368380-mRNA-1:exon:12996;Parent=Msa0368380-mRNA-1
chr3_1 exon 65020909 65021462 65020909 ID=Msa0368380-mRNA-1:exon:12995;Parent=Msa0368380-mRNA-1
chr3_1 five_prime_UTR 65021302 65021462 65021302 ID=Msa0368380-mRNA-1:five_prime_utr;Parent=Msa0368380-mRNA-1
chr3_1 CDS 65020909 65021301 65020909 ID=Msa0368380-mRNA-1:cds;Parent=Msa0368380-mRNA-1
chr3_1 CDS 65020401 65020821 65020401 ID=Msa0368380-mRNA-1:cds;Parent=Msa0368380-mRNA-1
chr3_1 CDS 65019967 65020316 65019967 ID=Msa0368380-mRNA-1:cds;Parent=Msa0368380-mRNA-1
chr3_1 three_prime_UTR 65019574 65019966 65019574 ID=Msa0368380-mRNA-1:three_prime_utr;Parent=Msa0368380-mRNA-1
Gene Sequence

>Msa0368380

ATGGCTGGAATGTGTTGTGGTGTTGTCGGAGAAGGTGACTCACCGGCGAGTTCACGTCCCTCCCGGCGCCGGAATTTGGACTTACTACCATTCAAATACATCGCCGACATGGCGTCCGGAACTTCTCGTAAACGCCGGCAACCAGATCTTAAGAAGGATTTCGAAAGCTGTGAAGACTCAAGCGAAGACAAAAGTAAGAAAAACAAGAAGGATGATAAAGAAAAGCCTTCTACGGAAGGTAATTTCGAAGTTGAAGAGTGTCCAAAATTCGGTGTTACTTCAGTTTGTGGTAGAAGAAGAGATATGGAAGATTCAGTTTCAGTTAAACCTTCTTTCTCTTCACAAGAACCTTTTCACTACTTCGGTGTTTTCGACGGTCACGGTTGCTCTCATGTTGCTACTATGTGTAAAGAGAGACTTCACGAAATTGTGAAGGAAGAAATCAACGAAGCTCAAGAGAATTTAGAGTGGAACAACACCATGCAACAAGGCTTTGCTCGCATGGACGATGAAGTTCAAAGATGGAACAGCAGTAGCCAAACTGTTACATGTAGATGTGAGCTTCAAACTCCTCACTGTGATGCTGTTGGATCCACAGCTGTTGTTGCCGTTGTCACTCCAGACAAAATTATCGTCTCAAACTGTGGTGATTCAAGAGCCGTTCTTTGCCGTAGCGGCGTTGCTATTCCTCTTTCCTCCGATCATAAGCCGGATCGACCCGATGAATTGCTCCGAGTCGAAGCGGCTGGAGGGCGCGTGATCTATTGGGATGGTCCAAGAGTCCTTGGAGTACTTGCCATGTCTAGAGCCATAGGTGACAATTATTTGAAACCTTATGTGATATCTGAGCCTGAGGTAACGGTAACGGAACGAAAAGAAGAAGATGAGTGTTTGATCCTAGCGAGTGATGGACTATGGGATGTTGTTTCAAATGACACAGCTTGTGGTGTTGTAAGGATGTGTTTGAAGGCACAGAAGCTGCCGTCGCTGCCGGGGACACCGGAAAACGAGGTGACGACGGATGGTTCTGATAGGGCATGTTCCGATGCTTCAATTTTGTTGACGAAGTTGGCTTTGGCAAGACATAGTTCGGATAATGTTAGTGTGGTGGTGATTGATTTGAGGAGAGATCGACGACAAGCATCAAATTCCAACAATAATTAA

Protein sequence

>Msa0368380

MAGMCCGVVGEGDSPASSRPSRRRNLDLLPFKYIADMASGTSRKRRQPDLKKDFESCEDSSEDKSKKNKKDDKEKPSTEGNFEVEECPKFGVTSVCGRRRDMEDSVSVKPSFSSQEPFHYFGVFDGHGCSHVATMCKERLHEIVKEEINEAQENLEWNNTMQQGFARMDDEVQRWNSSSQTVTCRCELQTPHCDAVGSTAVVAVVTPDKIIVSNCGDSRAVLCRSGVAIPLSSDHKPDRPDELLRVEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERKEEDECLILASDGLWDVVSNDTACGVVRMCLKAQKLPSLPGTPENEVTTDGSDRACSDASILLTKLALARHSSDNVSVVVIDLRRDRRQASNSNNN*