Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1353280 | XP_003611333.2 | 97.172 | 389 | 10 | 1 | 1 | 389 | 1 | 388 | 0.0 | 788 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1353280 | sp|Q8W4K5|VAB_ARATH | 37.662 | 308 | 143 | 6 | 105 | 379 | 189 | 480 | 7.42e-28 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1353280 | G7JXD4 | 97.172 | 389 | 10 | 1 | 1 | 389 | 1 | 388 | 0.0 | 788 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021980 | Msa1353280 | 0.840589 | 7.937903e-58 | -8.615850e-47 |
| Msa0030030 | Msa1353280 | 0.803392 | 3.562744e-49 | -8.615850e-47 |
| Msa0039200 | Msa1353280 | 0.826258 | 2.993740e-54 | -8.615850e-47 |
| Msa0040190 | Msa1353280 | 0.801159 | 1.027118e-48 | -8.615850e-47 |
| Msa0041780 | Msa1353280 | 0.821761 | 3.399786e-53 | -8.615850e-47 |
| Msa0051100 | Msa1353280 | 0.806542 | 7.819587e-50 | -8.615850e-47 |
| Msa0053480 | Msa1353280 | 0.804888 | 1.739990e-49 | -8.615850e-47 |
| Msa0053960 | Msa1353280 | 0.815737 | 7.931216e-52 | -8.615850e-47 |
| Msa0054000 | Msa1353280 | 0.811183 | 7.952839e-51 | -8.615850e-47 |
| Msa0057740 | Msa1353280 | 0.825065 | 5.742243e-54 | -8.615850e-47 |
| Msa0070090 | Msa1353280 | 0.823360 | 1.444518e-53 | -8.615850e-47 |
| Msa0085580 | Msa1353280 | 0.815395 | 9.449713e-52 | -8.615850e-47 |
| Msa0086820 | Msa1353280 | 0.825675 | 4.119666e-54 | -8.615850e-47 |
| Msa0103060 | Msa1353280 | 0.830315 | 3.147259e-55 | -8.615850e-47 |
| Msa0117300 | Msa1353280 | 0.815760 | 7.835634e-52 | -8.615850e-47 |
| Msa1351590 | Msa1353280 | 0.800592 | 1.340683e-48 | -8.615850e-47 |
| Msa1353280 | Msa1356730 | 0.805371 | 1.378932e-49 | -8.615850e-47 |
| Msa1353280 | Msa1357720 | 0.840120 | 1.052687e-57 | -8.615850e-47 |
| Msa1353280 | Msa1360380 | 0.817627 | 2.989956e-52 | -8.615850e-47 |
| Msa1353280 | Msa1364520 | 0.817298 | 3.546593e-52 | -8.615850e-47 |
| Msa1353280 | Msa1368660 | 0.843166 | 1.655741e-58 | -8.615850e-47 |
| Msa1353280 | Msa1370630 | 0.850596 | 1.533257e-60 | -8.615850e-47 |
| Msa1353280 | Msa1370910 | -0.809454 | 1.877597e-50 | -8.615850e-47 |
| Msa1353280 | Msa1381720 | 0.817998 | 2.464653e-52 | -8.615850e-47 |
| Msa1353280 | Msa1385940 | 0.807137 | 5.854717e-50 | -8.615850e-47 |
| Msa1353280 | Msa1388270 | 0.822720 | 2.037343e-53 | -8.615850e-47 |
| Msa1353280 | Msa1393600 | 0.808117 | 3.625307e-50 | -8.615850e-47 |
| Msa1353280 | Msa1395640 | 0.813688 | 2.255202e-51 | -8.615850e-47 |
| Msa1353280 | Msa1401000 | 0.854903 | 9.028986e-62 | -8.615850e-47 |
| Msa1353280 | Msa1405190 | 0.829367 | 5.356162e-55 | -8.615850e-47 |
| Msa1353280 | Msa1407200 | 0.804862 | 1.761741e-49 | -8.615850e-47 |
| Msa1353280 | Msa1409050 | 0.800335 | 1.512423e-48 | -8.615850e-47 |
| Msa1353280 | Msa1409760 | 0.803264 | 3.787588e-49 | -8.615850e-47 |
| Msa1353280 | Msa1413220 | 0.834723 | 2.541752e-56 | -8.615850e-47 |
| Msa1353280 | Msa1413880 | 0.800062 | 1.718915e-48 | -8.615850e-47 |
| Msa1353280 | Msa1413900 | 0.827777 | 1.297407e-54 | -8.615850e-47 |
| Msa1353280 | Msa1415120 | 0.822212 | 2.673004e-53 | -8.615850e-47 |
| Msa1353280 | Msa1415270 | 0.816537 | 5.256059e-52 | -8.615850e-47 |
| Msa1353280 | Msa1419230 | 0.847156 | 1.381787e-59 | -8.615850e-47 |
| Msa1353280 | Msa1427180 | 0.808289 | 3.332769e-50 | -8.615850e-47 |
| Msa1353280 | Msa1428440 | 0.837433 | 5.214288e-57 | -8.615850e-47 |
| Msa1353280 | Msa1432250 | 0.822246 | 2.624884e-53 | -8.615850e-47 |
| Msa1353280 | Msa1433380 | 0.842020 | 3.336121e-58 | -8.615850e-47 |
| Msa1353280 | Msa1440180 | 0.803220 | 3.868011e-49 | -8.615850e-47 |
| Msa1353280 | Msa1445700 | 0.841437 | 4.755603e-58 | -8.615850e-47 |
| Msa1353280 | Msa1446220 | 0.813275 | 2.778909e-51 | -8.615850e-47 |
| Msa1353280 | Msa1449740 | 0.800236 | 1.584618e-48 | -8.615850e-47 |
| Msa1353280 | Msa1450850 | 0.808937 | 2.422541e-50 | -8.615850e-47 |
| Msa1353280 | Msa1452200 | 0.806488 | 8.030025e-50 | -8.615850e-47 |
| Msa1353280 | Msa1452940 | 0.813089 | 3.053400e-51 | -8.615850e-47 |
| Msa1353280 | Msa1459630 | 0.828135 | 1.063605e-54 | -8.615850e-47 |
| Msa0606680 | Msa1353280 | 0.818639 | 1.764485e-52 | -8.615850e-47 |
| Msa0615850 | Msa1353280 | 0.802217 | 6.230522e-49 | -8.615850e-47 |
| Msa0623360 | Msa1353280 | 0.852414 | 4.689221e-61 | -8.615850e-47 |
| Msa0630850 | Msa1353280 | 0.845760 | 3.321301e-59 | -8.615850e-47 |
| Msa0639030 | Msa1353280 | 0.828504 | 8.667181e-55 | -8.615850e-47 |
| Msa0643020 | Msa1353280 | -0.809237 | 2.089635e-50 | -8.615850e-47 |
| Msa0648170 | Msa1353280 | 0.804002 | 2.661870e-49 | -8.615850e-47 |
| Msa0648200 | Msa1353280 | 0.842282 | 2.844101e-58 | -8.615850e-47 |
| Msa0648300 | Msa1353280 | 0.867100 | 1.755148e-65 | -8.615850e-47 |
| Msa0653710 | Msa1353280 | 0.833809 | 4.309068e-56 | -8.615850e-47 |
| Msa0656270 | Msa1353280 | 0.812877 | 3.397678e-51 | -8.615850e-47 |
| Msa0664110 | Msa1353280 | 0.831918 | 1.271108e-55 | -8.615850e-47 |
| Msa0664130 | Msa1353280 | 0.836667 | 8.182636e-57 | -8.615850e-47 |
| Msa0670740 | Msa1353280 | -0.810751 | 9.864696e-51 | -8.615850e-47 |
| Msa0681880 | Msa1353280 | 0.850479 | 1.653956e-60 | -8.615850e-47 |
| Msa0682730 | Msa1353280 | -0.819644 | 1.042305e-52 | -8.615850e-47 |
| Msa0685880 | Msa1353280 | 0.820880 | 5.428660e-53 | -8.615850e-47 |
| Msa0687320 | Msa1353280 | 0.800215 | 1.600121e-48 | -8.615850e-47 |
| Msa0691140 | Msa1353280 | 0.814451 | 1.530281e-51 | -8.615850e-47 |
| Msa0697600 | Msa1353280 | 0.835871 | 1.303991e-56 | -8.615850e-47 |
| Msa0698900 | Msa1353280 | 0.816963 | 4.216760e-52 | -8.615850e-47 |
| Msa0700070 | Msa1353280 | 0.804563 | 2.034481e-49 | -8.615850e-47 |
| Msa0705050 | Msa1353280 | 0.802140 | 6.461469e-49 | -8.615850e-47 |
| Msa0713530 | Msa1353280 | 0.808198 | 3.484731e-50 | -8.615850e-47 |
| Msa0714060 | Msa1353280 | 0.819975 | 8.758694e-53 | -8.615850e-47 |
| Msa0714200 | Msa1353280 | 0.826561 | 2.536326e-54 | -8.615850e-47 |
| Msa0729780 | Msa1353280 | 0.827834 | 1.256539e-54 | -8.615850e-47 |
| Msa0736930 | Msa1353280 | 0.821995 | 3.000503e-53 | -8.615850e-47 |
| Msa0738600 | Msa1353280 | 0.838128 | 3.455951e-57 | -8.615850e-47 |
| Msa0739610 | Msa1353280 | 0.830571 | 2.724576e-55 | -8.615850e-47 |
| Msa0755590 | Msa1353280 | 0.804555 | 2.042516e-49 | -8.615850e-47 |
| Msa0756440 | Msa1353280 | 0.828703 | 7.759563e-55 | -8.615850e-47 |
| Msa0766880 | Msa1353280 | 0.831992 | 1.218485e-55 | -8.615850e-47 |
| Msa0770020 | Msa1353280 | 0.834028 | 3.798343e-56 | -8.615850e-47 |
| Msa0772040 | Msa1353280 | 0.813126 | 2.997583e-51 | -8.615850e-47 |
| Msa0773290 | Msa1353280 | 0.820896 | 5.383958e-53 | -8.615850e-47 |
| Msa0775420 | Msa1353280 | 0.829245 | 5.733697e-55 | -8.615850e-47 |
| Msa0776290 | Msa1353280 | 0.808170 | 3.532497e-50 | -8.615850e-47 |
| Msa0782030 | Msa1353280 | 0.836507 | 8.987823e-57 | -8.615850e-47 |
| Msa0796460 | Msa1353280 | 0.949389 | 1.405893e-107 | -8.615850e-47 |
| Msa0797240 | Msa1353280 | 0.805763 | 1.141115e-49 | -8.615850e-47 |
| Msa0810590 | Msa1353280 | 0.806027 | 1.004128e-49 | -8.615850e-47 |
| Msa0812800 | Msa1353280 | 0.812789 | 3.552309e-51 | -8.615850e-47 |
| Msa0815950 | Msa1353280 | 0.820149 | 7.987772e-53 | -8.615850e-47 |
| Msa0818950 | Msa1353280 | 0.840418 | 8.798810e-58 | -8.615850e-47 |
| Msa0819670 | Msa1353280 | 0.809100 | 2.235279e-50 | -8.615850e-47 |
| Msa0822370 | Msa1353280 | 0.822560 | 2.219314e-53 | -8.615850e-47 |
| Msa0834160 | Msa1353280 | 0.818707 | 1.703251e-52 | -8.615850e-47 |
| Msa0834200 | Msa1353280 | 0.865314 | 6.461084e-65 | -8.615850e-47 |
| Msa0834240 | Msa1353280 | 0.853263 | 2.681752e-61 | -8.615850e-47 |
| Msa0835010 | Msa1353280 | 0.804871 | 1.754148e-49 | -8.615850e-47 |
| Msa0835550 | Msa1353280 | 0.845144 | 4.878578e-59 | -8.615850e-47 |
| Msa0131090 | Msa1353280 | 0.812196 | 4.787089e-51 | -8.615850e-47 |
| Msa0133670 | Msa1353280 | 0.825964 | 3.517368e-54 | -8.615850e-47 |
| Msa0133880 | Msa1353280 | 0.831059 | 2.068192e-55 | -8.615850e-47 |
| Msa0134550 | Msa1353280 | 0.806320 | 8.712643e-50 | -8.615850e-47 |
| Msa0139740 | Msa1353280 | 0.811640 | 6.327426e-51 | -8.615850e-47 |
| Msa0143210 | Msa1353280 | 0.813727 | 2.211005e-51 | -8.615850e-47 |
| Msa0156780 | Msa1353280 | 0.822087 | 2.857237e-53 | -8.615850e-47 |
| Msa0160650 | Msa1353280 | 0.820716 | 5.920344e-53 | -8.615850e-47 |
| Msa0181290 | Msa1353280 | 0.822323 | 2.518763e-53 | -8.615850e-47 |
| Msa0184030 | Msa1353280 | 0.807786 | 4.263561e-50 | -8.615850e-47 |
| Msa0184120 | Msa1353280 | 0.828475 | 8.805877e-55 | -8.615850e-47 |
| Msa0188500 | Msa1353280 | 0.859316 | 4.499049e-63 | -8.615850e-47 |
| Msa0197730 | Msa1353280 | 0.814322 | 1.634404e-51 | -8.615850e-47 |
| Msa0200840 | Msa1353280 | 0.822004 | 2.987289e-53 | -8.615850e-47 |
| Msa0200870 | Msa1353280 | 0.842842 | 2.019599e-58 | -8.615850e-47 |
| Msa0201130 | Msa1353280 | 0.824508 | 7.771227e-54 | -8.615850e-47 |
| Msa0203180 | Msa1353280 | 0.809230 | 2.097359e-50 | -8.615850e-47 |
| Msa0218480 | Msa1353280 | 0.800771 | 1.232840e-48 | -8.615850e-47 |
| Msa0218590 | Msa1353280 | 0.803439 | 3.484683e-49 | -8.615850e-47 |
| Msa0221860 | Msa1353280 | 0.822169 | 2.735538e-53 | -8.615850e-47 |
| Msa0221940 | Msa1353280 | 0.813402 | 2.607136e-51 | -8.615850e-47 |
| Msa0223190 | Msa1353280 | 0.804214 | 2.404849e-49 | -8.615850e-47 |
| Msa0225880 | Msa1353280 | 0.825376 | 4.847612e-54 | -8.615850e-47 |
| Msa0230980 | Msa1353280 | 0.861106 | 1.295006e-63 | -8.615850e-47 |
| Msa1229770 | Msa1353280 | 0.836077 | 1.156000e-56 | -8.615850e-47 |
| Msa1230190 | Msa1353280 | 0.820255 | 7.555714e-53 | -8.615850e-47 |
| Msa1231520 | Msa1353280 | 0.806370 | 8.503635e-50 | -8.615850e-47 |
| Msa1237260 | Msa1353280 | 0.818449 | 1.948888e-52 | -8.615850e-47 |
| Msa1238370 | Msa1353280 | 0.827365 | 1.628585e-54 | -8.615850e-47 |
| Msa1240060 | Msa1353280 | -0.815039 | 1.133631e-51 | -8.615850e-47 |
| Msa1240820 | Msa1353280 | 0.842183 | 3.021213e-58 | -8.615850e-47 |
| Msa1242990 | Msa1353280 | 0.833260 | 5.905325e-56 | -8.615850e-47 |
| Msa1245300 | Msa1353280 | 0.808883 | 2.488046e-50 | -8.615850e-47 |
| Msa1246420 | Msa1353280 | 0.825428 | 4.714201e-54 | -8.615850e-47 |
| Msa1259010 | Msa1353280 | 0.840787 | 7.047383e-58 | -8.615850e-47 |
| Msa1262740 | Msa1353280 | 0.811524 | 6.707022e-51 | -8.615850e-47 |
| Msa1263610 | Msa1353280 | 0.849728 | 2.683443e-60 | -8.615850e-47 |
| Msa1264140 | Msa1353280 | 0.814996 | 1.159082e-51 | -8.615850e-47 |
| Msa1274310 | Msa1353280 | 0.817012 | 4.112598e-52 | -8.615850e-47 |
| Msa1281370 | Msa1353280 | -0.805414 | 1.350487e-49 | -8.615850e-47 |
| Msa1282210 | Msa1353280 | 0.820405 | 6.979023e-53 | -8.615850e-47 |
| Msa1283120 | Msa1353280 | 0.800954 | 1.131056e-48 | -8.615850e-47 |
| Msa1287160 | Msa1353280 | 0.803488 | 3.403633e-49 | -8.615850e-47 |
| Msa1287340 | Msa1353280 | 0.812095 | 5.036535e-51 | -8.615850e-47 |
| Msa1299280 | Msa1353280 | -0.803840 | 2.876549e-49 | -8.615850e-47 |
| Msa1299370 | Msa1353280 | 0.805280 | 1.440530e-49 | -8.615850e-47 |
| Msa1302780 | Msa1353280 | 0.807621 | 4.621929e-50 | -8.615850e-47 |
| Msa1306700 | Msa1353280 | 0.823035 | 1.720153e-53 | -8.615850e-47 |
| Msa1320530 | Msa1353280 | -0.821369 | 4.187467e-53 | -8.615850e-47 |
| Msa1321390 | Msa1353280 | 0.812678 | 3.757251e-51 | -8.615850e-47 |
| Msa1323920 | Msa1353280 | 0.842897 | 1.952808e-58 | -8.615850e-47 |
| Msa1327820 | Msa1353280 | 0.802135 | 6.477207e-49 | -8.615850e-47 |
| Msa1329660 | Msa1353280 | 0.807533 | 4.824540e-50 | -8.615850e-47 |
| Msa1330660 | Msa1353280 | 0.832235 | 1.061037e-55 | -8.615850e-47 |
| Msa1335720 | Msa1353280 | 0.805068 | 1.595948e-49 | -8.615850e-47 |
| Msa1342400 | Msa1353280 | 0.858300 | 9.054834e-63 | -8.615850e-47 |
| Msa0365150 | Msa1353280 | 0.808024 | 3.794400e-50 | -8.615850e-47 |
| Msa0368380 | Msa1353280 | 0.809610 | 1.738062e-50 | -8.615850e-47 |
| Msa0369750 | Msa1353280 | 0.801123 | 1.044345e-48 | -8.615850e-47 |
| Msa0372990 | Msa1353280 | 0.813902 | 2.023187e-51 | -8.615850e-47 |
| Msa0373110 | Msa1353280 | 0.801474 | 8.853586e-49 | -8.615850e-47 |
| Msa0378670 | Msa1353280 | 0.814437 | 1.541642e-51 | -8.615850e-47 |
| Msa0378700 | Msa1353280 | 0.821126 | 4.765927e-53 | -8.615850e-47 |
| Msa0379500 | Msa1353280 | 0.817827 | 2.694815e-52 | -8.615850e-47 |
| Msa0379720 | Msa1353280 | 0.822312 | 2.533325e-53 | -8.615850e-47 |
| Msa0403720 | Msa1353280 | 0.826857 | 2.155125e-54 | -8.615850e-47 |
| Msa0404180 | Msa1353280 | 0.818742 | 1.672207e-52 | -8.615850e-47 |
| Msa0411000 | Msa1353280 | 0.825391 | 4.808337e-54 | -8.615850e-47 |
| Msa0417130 | Msa1353280 | 0.808493 | 3.014226e-50 | -8.615850e-47 |
| Msa0417150 | Msa1353280 | 0.800091 | 1.695836e-48 | -8.615850e-47 |
| Msa0421100 | Msa1353280 | 0.802044 | 6.761068e-49 | -8.615850e-47 |
| Msa0421390 | Msa1353280 | 0.818900 | 1.539721e-52 | -8.615850e-47 |
| Msa0427050 | Msa1353280 | 0.828882 | 7.021295e-55 | -8.615850e-47 |
| Msa0429100 | Msa1353280 | 0.835716 | 1.426947e-56 | -8.615850e-47 |
| Msa0429130 | Msa1353280 | 0.822358 | 2.471949e-53 | -8.615850e-47 |
| Msa0431940 | Msa1353280 | 0.844062 | 9.536810e-59 | -8.615850e-47 |
| Msa0436600 | Msa1353280 | 0.817276 | 3.587204e-52 | -8.615850e-47 |
| Msa0448400 | Msa1353280 | 0.833176 | 6.197376e-56 | -8.615850e-47 |
| Msa0454940 | Msa1353280 | 0.853835 | 1.837200e-61 | -8.615850e-47 |
| Msa0455230 | Msa1353280 | 0.809747 | 1.624360e-50 | -8.615850e-47 |
| Msa0456480 | Msa1353280 | 0.850976 | 1.198339e-60 | -8.615850e-47 |
| Msa0459080 | Msa1353280 | 0.804077 | 2.567984e-49 | -8.615850e-47 |
| Msa0465640 | Msa1353280 | 0.813947 | 1.977920e-51 | -8.615850e-47 |
| Msa0473450 | Msa1353280 | 0.805091 | 1.578140e-49 | -8.615850e-47 |
| Msa0475360 | Msa1353280 | 0.810453 | 1.143854e-50 | -8.615850e-47 |
| Msa0984820 | Msa1353280 | 0.815066 | 1.118520e-51 | -8.615850e-47 |
| Msa0984850 | Msa1353280 | 0.810100 | 1.363195e-50 | -8.615850e-47 |
| Msa0984860 | Msa1353280 | 0.840736 | 7.266140e-58 | -8.615850e-47 |
| Msa0985040 | Msa1353280 | 0.819621 | 1.055213e-52 | -8.615850e-47 |
| Msa0995220 | Msa1353280 | 0.813895 | 2.029876e-51 | -8.615850e-47 |
| Msa0995660 | Msa1353280 | 0.826264 | 2.984870e-54 | -8.615850e-47 |
| Msa0998940 | Msa1353280 | 0.810605 | 1.060855e-50 | -8.615850e-47 |
| Msa0999590 | Msa1353280 | 0.833291 | 5.801008e-56 | -8.615850e-47 |
| Msa1016130 | Msa1353280 | 0.871589 | 6.090362e-67 | -8.615850e-47 |
| Msa1024580 | Msa1353280 | 0.815645 | 8.313222e-52 | -8.615850e-47 |
| Msa1028720 | Msa1353280 | 0.813998 | 1.927155e-51 | -8.615850e-47 |
| Msa1031220 | Msa1353280 | 0.805240 | 1.468947e-49 | -8.615850e-47 |
| Msa1031760 | Msa1353280 | 0.822146 | 2.769082e-53 | -8.615850e-47 |
| Msa1038110 | Msa1353280 | 0.853175 | 2.843568e-61 | -8.615850e-47 |
| Msa1041550 | Msa1353280 | 0.827699 | 1.353960e-54 | -8.615850e-47 |
| Msa1043870 | Msa1353280 | 0.812458 | 4.198047e-51 | -8.615850e-47 |
| Msa1044450 | Msa1353280 | 0.837623 | 4.660814e-57 | -8.615850e-47 |
| Msa1049440 | Msa1353280 | 0.819583 | 1.076343e-52 | -8.615850e-47 |
| Msa1053990 | Msa1353280 | -0.813275 | 2.778909e-51 | -8.615850e-47 |
| Msa1063180 | Msa1353280 | 0.817670 | 2.922987e-52 | -8.615850e-47 |
| Msa1063490 | Msa1353280 | 0.822730 | 2.025766e-53 | -8.615850e-47 |
| Msa1067710 | Msa1353280 | 0.812726 | 3.667731e-51 | -8.615850e-47 |
| Msa1070830 | Msa1353280 | 0.834254 | 3.334031e-56 | -8.615850e-47 |
| Msa1071310 | Msa1353280 | 0.828047 | 1.116880e-54 | -8.615850e-47 |
| Msa1071460 | Msa1353280 | 0.814457 | 1.525903e-51 | -8.615850e-47 |
| Msa1072770 | Msa1353280 | 0.831469 | 1.640164e-55 | -8.615850e-47 |
| Msa1079610 | Msa1353280 | 0.824336 | 8.529971e-54 | -8.615850e-47 |
| Msa1080790 | Msa1353280 | 0.812765 | 3.596260e-51 | -8.615850e-47 |
| Msa1081530 | Msa1353280 | 0.833005 | 6.837291e-56 | -8.615850e-47 |
| Msa1102180 | Msa1353280 | 0.838561 | 2.672528e-57 | -8.615850e-47 |
| Msa0243470 | Msa1353280 | 0.841640 | 4.202770e-58 | -8.615850e-47 |
| Msa0246300 | Msa1353280 | 0.801560 | 8.500410e-49 | -8.615850e-47 |
| Msa0256170 | Msa1353280 | 0.809809 | 1.575025e-50 | -8.615850e-47 |
| Msa0260470 | Msa1353280 | 0.825839 | 3.765479e-54 | -8.615850e-47 |
| Msa0264020 | Msa1353280 | 0.802456 | 5.561453e-49 | -8.615850e-47 |
| Msa0264240 | Msa1353280 | 0.811054 | 8.479885e-51 | -8.615850e-47 |
| Msa0264420 | Msa1353280 | 0.819391 | 1.190147e-52 | -8.615850e-47 |
| Msa0268460 | Msa1353280 | 0.804044 | 2.609462e-49 | -8.615850e-47 |
| Msa0270460 | Msa1353280 | 0.845276 | 4.492993e-59 | -8.615850e-47 |
| Msa0281940 | Msa1353280 | 0.802304 | 5.977353e-49 | -8.615850e-47 |
| Msa0282500 | Msa1353280 | 0.806009 | 1.012813e-49 | -8.615850e-47 |
| Msa0302310 | Msa1353280 | 0.809603 | 1.744028e-50 | -8.615850e-47 |
| Msa0303200 | Msa1353280 | 0.809595 | 1.750533e-50 | -8.615850e-47 |
| Msa0304110 | Msa1353280 | 0.822849 | 1.901114e-53 | -8.615850e-47 |
| Msa0305580 | Msa1353280 | 0.802027 | 6.817735e-49 | -8.615850e-47 |
| Msa0309060 | Msa1353280 | 0.825849 | 3.744798e-54 | -8.615850e-47 |
| Msa0317630 | Msa1353280 | 0.802700 | 4.953497e-49 | -8.615850e-47 |
| Msa0325510 | Msa1353280 | 0.847642 | 1.016543e-59 | -8.615850e-47 |
| Msa0339560 | Msa1353280 | 0.825592 | 4.310920e-54 | -8.615850e-47 |
| Msa0339670 | Msa1353280 | 0.813953 | 1.971407e-51 | -8.615850e-47 |
| Msa0341190 | Msa1353280 | 0.822644 | 2.121518e-53 | -8.615850e-47 |
| Msa0343990 | Msa1353280 | 0.829206 | 5.861633e-55 | -8.615850e-47 |
| Msa0352640 | Msa1353280 | 0.883750 | 3.442957e-71 | -8.615850e-47 |
| Msa0362430 | Msa1353280 | 0.855314 | 6.856808e-62 | -8.615850e-47 |
| Msa0363460 | Msa1353280 | 0.809967 | 1.456455e-50 | -8.615850e-47 |
| Msa0364010 | Msa1353280 | 0.849149 | 3.892907e-60 | -8.615850e-47 |
| Msa1108530 | Msa1353280 | 0.848355 | 6.460873e-60 | -8.615850e-47 |
| Msa1108780 | Msa1353280 | 0.819232 | 1.293912e-52 | -8.615850e-47 |
| Msa1117830 | Msa1353280 | 0.814730 | 1.327925e-51 | -8.615850e-47 |
| Msa1118930 | Msa1353280 | 0.812396 | 4.330600e-51 | -8.615850e-47 |
| Msa1122480 | Msa1353280 | 0.842818 | 2.049406e-58 | -8.615850e-47 |
| Msa1123340 | Msa1353280 | 0.820762 | 5.778284e-53 | -8.615850e-47 |
| Msa1124440 | Msa1353280 | 0.829885 | 4.006233e-55 | -8.615850e-47 |
| Msa1125610 | Msa1353280 | 0.802220 | 6.220751e-49 | -8.615850e-47 |
| Msa1129660 | Msa1353280 | 0.847353 | 1.220008e-59 | -8.615850e-47 |
| Msa1152280 | Msa1353280 | 0.850882 | 1.273483e-60 | -8.615850e-47 |
| Msa1152500 | Msa1353280 | 0.802440 | 5.605444e-49 | -8.615850e-47 |
| Msa1158650 | Msa1353280 | 0.817621 | 2.999476e-52 | -8.615850e-47 |
| Msa1161120 | Msa1353280 | 0.860490 | 1.992597e-63 | -8.615850e-47 |
| Msa1161520 | Msa1353280 | 0.822129 | 2.794144e-53 | -8.615850e-47 |
| Msa1166450 | Msa1353280 | 0.808339 | 3.251450e-50 | -8.615850e-47 |
| Msa1182400 | Msa1353280 | 0.820164 | 7.925942e-53 | -8.615850e-47 |
| Msa1186010 | Msa1353280 | 0.819634 | 1.047840e-52 | -8.615850e-47 |
| Msa1186580 | Msa1353280 | 0.834022 | 3.809817e-56 | -8.615850e-47 |
| Msa1188820 | Msa1353280 | 0.832282 | 1.033113e-55 | -8.615850e-47 |
| Msa1194170 | Msa1353280 | -0.845002 | 5.328044e-59 | -8.615850e-47 |
| Msa1204110 | Msa1353280 | 0.838115 | 3.484050e-57 | -8.615850e-47 |
| Msa1204380 | Msa1353280 | 0.802391 | 5.737715e-49 | -8.615850e-47 |
| Msa1208810 | Msa1353280 | 0.820557 | 6.440798e-53 | -8.615850e-47 |
| Msa1211260 | Msa1353280 | 0.828492 | 8.724484e-55 | -8.615850e-47 |
| Msa1211300 | Msa1353280 | 0.827189 | 1.794775e-54 | -8.615850e-47 |
| Msa1211370 | Msa1353280 | 0.805413 | 1.351048e-49 | -8.615850e-47 |
| Msa1211390 | Msa1353280 | 0.836959 | 6.893216e-57 | -8.615850e-47 |
| Msa1215660 | Msa1353280 | 0.811880 | 5.610901e-51 | -8.615850e-47 |
| Msa1216700 | Msa1353280 | 0.815399 | 9.431396e-52 | -8.615850e-47 |
| Msa1223510 | Msa1353280 | 0.806517 | 7.917063e-50 | -8.615850e-47 |
| Msa0496460 | Msa1353280 | 0.837512 | 4.976029e-57 | -8.615850e-47 |
| Msa0496470 | Msa1353280 | 0.839993 | 1.136229e-57 | -8.615850e-47 |
| Msa0496570 | Msa1353280 | 0.819515 | 1.115464e-52 | -8.615850e-47 |
| Msa0502910 | Msa1353280 | 0.844521 | 7.182215e-59 | -8.615850e-47 |
| Msa0508140 | Msa1353280 | 0.821571 | 3.762008e-53 | -8.615850e-47 |
| Msa0509510 | Msa1353280 | 0.808394 | 3.164074e-50 | -8.615850e-47 |
| Msa0520810 | Msa1353280 | 0.830157 | 3.439091e-55 | -8.615850e-47 |
| Msa0521100 | Msa1353280 | 0.804222 | 2.395431e-49 | -8.615850e-47 |
| Msa0534380 | Msa1353280 | 0.836270 | 1.032393e-56 | -8.615850e-47 |
| Msa0546370 | Msa1353280 | 0.880286 | 6.221940e-70 | -8.615850e-47 |
| Msa0551520 | Msa1353280 | 0.827171 | 1.813133e-54 | -8.615850e-47 |
| Msa0553520 | Msa1353280 | 0.802554 | 5.310744e-49 | -8.615850e-47 |
| Msa0554440 | Msa1353280 | 0.865992 | 3.949361e-65 | -8.615850e-47 |
| Msa0555510 | Msa1353280 | 0.802898 | 4.508485e-49 | -8.615850e-47 |
| Msa0558890 | Msa1353280 | 0.827396 | 1.600866e-54 | -8.615850e-47 |
| Msa0560370 | Msa1353280 | 0.821577 | 3.749699e-53 | -8.615850e-47 |
| Msa0568490 | Msa1353280 | 0.859947 | 2.907240e-63 | -8.615850e-47 |
| Msa0579240 | Msa1353280 | 0.803823 | 2.900456e-49 | -8.615850e-47 |
| Msa0585930 | Msa1353280 | 0.806695 | 7.260865e-50 | -8.615850e-47 |
| Msa0601920 | Msa1353280 | -0.811442 | 6.985779e-51 | -8.615850e-47 |
| Msa0848980 | Msa1353280 | 0.837549 | 4.868668e-57 | -8.615850e-47 |
| Msa0861480 | Msa1353280 | 0.821560 | 3.783495e-53 | -8.615850e-47 |
| Msa0861560 | Msa1353280 | 0.840254 | 9.714774e-58 | -8.615850e-47 |
| Msa0861800 | Msa1353280 | 0.826876 | 2.132649e-54 | -8.615850e-47 |
| Msa0871310 | Msa1353280 | 0.856575 | 2.933178e-62 | -8.615850e-47 |
| Msa0873010 | Msa1353280 | 0.804072 | 2.575095e-49 | -8.615850e-47 |
| Msa0883670 | Msa1353280 | 0.809466 | 1.865707e-50 | -8.615850e-47 |
| Msa0883700 | Msa1353280 | 0.808172 | 3.529316e-50 | -8.615850e-47 |
| Msa0887000 | Msa1353280 | 0.804398 | 2.202336e-49 | -8.615850e-47 |
| Msa0895860 | Msa1353280 | 0.821274 | 4.404661e-53 | -8.615850e-47 |
| Msa0897390 | Msa1353280 | 0.826535 | 2.572515e-54 | -8.615850e-47 |
| Msa0899080 | Msa1353280 | 0.802525 | 5.382637e-49 | -8.615850e-47 |
| Msa0899730 | Msa1353280 | 0.804993 | 1.654604e-49 | -8.615850e-47 |
| Msa0923910 | Msa1353280 | 0.802686 | 4.986757e-49 | -8.615850e-47 |
| Msa0924820 | Msa1353280 | 0.812088 | 5.056006e-51 | -8.615850e-47 |
| Msa0925020 | Msa1353280 | 0.800211 | 1.602727e-48 | -8.615850e-47 |
| Msa0927890 | Msa1353280 | 0.817723 | 2.844086e-52 | -8.615850e-47 |
| Msa0934830 | Msa1353280 | 0.800133 | 1.662665e-48 | -8.615850e-47 |
| Msa0942300 | Msa1353280 | 0.841230 | 5.390445e-58 | -8.615850e-47 |
| Msa0946300 | Msa1353280 | 0.802737 | 4.867668e-49 | -8.615850e-47 |
| Msa0964650 | Msa1353280 | 0.803974 | 2.698514e-49 | -8.615850e-47 |
| Msa0967250 | Msa1353280 | 0.823028 | 1.727063e-53 | -8.615850e-47 |
| Msa0967260 | Msa1353280 | 0.800873 | 1.175126e-48 | -8.615850e-47 |
| Msa0978000 | Msa1353280 | 0.802521 | 5.392559e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1353280 | MtrunA17_Chr5g0399391 | 97.172 | 389 | 10 | 1 | 1 | 389 | 1 | 388 | 0.0 | 788 |
| Msa1353280 | MtrunA17_Chr3g0140081 | 35.492 | 386 | 168 | 11 | 55 | 379 | 1 | 366 | 1.12e-45 | 161 |
| Msa1353280 | MtrunA17_Chr4g0019631 | 37.884 | 293 | 153 | 9 | 66 | 346 | 18 | 293 | 8.54e-35 | 130 |
| Msa1353280 | MtrunA17_Chr7g0260211 | 36.545 | 301 | 151 | 6 | 113 | 382 | 175 | 466 | 5.82e-34 | 131 |
| Msa1353280 | MtrunA17_Chr1g0166381 | 38.793 | 232 | 121 | 3 | 169 | 379 | 226 | 457 | 5.87e-32 | 126 |
| Msa1353280 | MtrunA17_Chr1g0185201 | 39.407 | 236 | 121 | 5 | 169 | 382 | 241 | 476 | 1.08e-29 | 120 |
| Msa1353280 | MtrunA17_Chr1g0204831 | 40.969 | 227 | 113 | 4 | 172 | 379 | 220 | 444 | 2.50e-29 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1353280 | AT4G17350.1 | 56.618 | 408 | 154 | 11 | 7 | 398 | 2 | 402 | 2.43e-133 | 388 |
| Msa1353280 | AT5G47440.1 | 55.256 | 371 | 149 | 7 | 42 | 399 | 37 | 403 | 1.34e-118 | 351 |
| Msa1353280 | AT4G16670.1 | 51.762 | 369 | 156 | 9 | 53 | 401 | 63 | 429 | 1.46e-100 | 305 |
| Msa1353280 | AT4G16670.2 | 54.325 | 289 | 112 | 7 | 53 | 322 | 63 | 350 | 5.73e-79 | 248 |
| Msa1353280 | AT4G16670.3 | 49.686 | 318 | 111 | 8 | 53 | 322 | 63 | 379 | 1.30e-73 | 234 |
| Msa1353280 | AT3G22810.3 | 41.026 | 312 | 143 | 7 | 99 | 379 | 21 | 322 | 2.35e-56 | 188 |
| Msa1353280 | AT3G22810.1 | 41.026 | 312 | 143 | 7 | 99 | 379 | 159 | 460 | 2.95e-55 | 189 |
| Msa1353280 | AT4G14740.3 | 39.172 | 314 | 146 | 8 | 99 | 379 | 25 | 326 | 5.02e-49 | 169 |
| Msa1353280 | AT4G14740.1 | 39.172 | 314 | 146 | 8 | 99 | 379 | 164 | 465 | 6.61e-48 | 170 |
| Msa1353280 | AT4G14740.2 | 39.172 | 314 | 146 | 8 | 99 | 379 | 164 | 465 | 6.61e-48 | 170 |
| Msa1353280 | AT5G43870.1 | 39.661 | 295 | 150 | 6 | 104 | 379 | 158 | 443 | 1.85e-39 | 147 |
| Msa1353280 | AT4G32780.1 | 34.133 | 375 | 189 | 10 | 48 | 379 | 35 | 394 | 3.43e-39 | 145 |
| Msa1353280 | AT4G32780.2 | 34.133 | 375 | 189 | 10 | 48 | 379 | 54 | 413 | 4.19e-39 | 145 |
| Msa1353280 | AT3G22810.2 | 39.179 | 268 | 117 | 6 | 99 | 337 | 159 | 409 | 7.54e-39 | 144 |
| Msa1353280 | AT4G14740.4 | 39.216 | 255 | 112 | 6 | 99 | 322 | 164 | 406 | 1.73e-34 | 132 |
| Msa1353280 | AT3G63300.2 | 37.500 | 320 | 149 | 7 | 105 | 391 | 31 | 332 | 7.37e-29 | 115 |
| Msa1353280 | AT3G63300.1 | 37.662 | 308 | 143 | 6 | 105 | 379 | 189 | 480 | 7.55e-29 | 118 |
| Msa1353280 | AT5G43870.2 | 39.407 | 236 | 117 | 4 | 104 | 322 | 158 | 384 | 8.41e-25 | 105 |
Find 95 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTGAAGATCTCTATTT+TGG | 0.173414 | tig0013119:-738 | Msa1353280:CDS |
| ATTATTGTAGGTGTGGTTTA+TGG | 0.231356 | tig0013119:-807 | Msa1353280:intron |
| GTTGGTGGCTCAGGAATTTC+TGG | 0.231758 | tig0013119:+3031 | None:intergenic |
| TTGTTGCAGGTTACGGAAAA+AGG | 0.263078 | tig0013119:-1248 | Msa1353280:intron |
| GAACCCATACCCACTTATTC+AGG | 0.282884 | tig0013119:-3515 | Msa1353280:five_prime_UTR |
| AACCAACGTTGTAACTAAAA+AGG | 0.288132 | tig0013119:-3583 | Msa1353280:five_prime_UTR |
| CCCATTCGACAATTAGTAAA+TGG | 0.310053 | tig0013119:+2016 | None:intergenic |
| GTAAATGGTATGAGCTTTCC+AGG | 0.322981 | tig0013119:+2031 | None:intergenic |
| AGTAAAGAAAGAATATTATA+AGG | 0.331718 | tig0013119:+3428 | None:intergenic |
| TAGTGACAATCACTCTAAAT+TGG | 0.333729 | tig0013119:-1837 | Msa1353280:CDS |
| GTAGCAGTTCTTGATTTGTT+TGG | 0.333807 | tig0013119:-572 | Msa1353280:exon |
| CTATTAAGTATTAACAAATA+TGG | 0.346497 | tig0013119:+406 | None:intergenic |
| AATTGTCGAATGGGTACTAT+TGG | 0.349296 | tig0013119:-2007 | Msa1353280:CDS |
| GAATGGGTACTATTGGAAAA+TGG | 0.359539 | tig0013119:-2000 | Msa1353280:CDS |
| ATCAGTTGAGAGTGAGATAT+AGG | 0.373042 | tig0013119:+3360 | None:intergenic |
| GATTTCTGCGCCTCAATTAA+CGG | 0.383648 | tig0013119:-2882 | Msa1353280:intron |
| GGGAGATTTGTTGCAGGTTA+CGG | 0.396348 | tig0013119:-1255 | Msa1353280:CDS |
| AGCATCTTATTGTGTTGAAA+TGG | 0.401646 | tig0013119:-1783 | Msa1353280:CDS |
| TGGACTACAGGAACTGCTTA+TGG | 0.404340 | tig0013119:-429 | Msa1353280:three_prime_UTR |
| CTCACTGCTGCCGCTGCAAC+AGG | 0.409391 | tig0013119:-1674 | Msa1353280:intron |
| TAATCCTGAATAAGTGGGTA+TGG | 0.411945 | tig0013119:+3511 | None:intergenic |
| ACTGGTCCAAGCACATTGAT+TGG | 0.420396 | tig0013119:-3690 | Msa1353280:five_prime_UTR |
| CCATTTACTAATTGTCGAAT+GGG | 0.421708 | tig0013119:-2016 | Msa1353280:CDS |
| CTCTAAATTGGATGTTGCTA+TGG | 0.425258 | tig0013119:-1825 | Msa1353280:CDS |
| TCAAGAGGTGTTGGTGGCTC+AGG | 0.432946 | tig0013119:+3022 | None:intergenic |
| CATTCTGCACTGTCAATTGC+CGG | 0.433877 | tig0013119:-1893 | Msa1353280:CDS |
| ATGCGAGGGAGATTTGTTGC+AGG | 0.435484 | tig0013119:-1261 | Msa1353280:CDS |
| TTACATCAACAAGAAATATC+AGG | 0.443700 | tig0013119:-1112 | Msa1353280:intron |
| TGGAGTTCTTGTCTAGATCC+TGG | 0.446623 | tig0013119:-2994 | Msa1353280:CDS |
| ATGTTTCAACATTGGAGAAA+AGG | 0.448724 | tig0013119:-3130 | Msa1353280:CDS |
| TCCAAGCACATTGATTGGAT+TGG | 0.453538 | tig0013119:-3685 | Msa1353280:five_prime_UTR |
| TAAGACTCATGAAACATTAC+CGG | 0.454911 | tig0013119:-2909 | Msa1353280:CDS |
| AACATTGGAGAAAAGGATCA+TGG | 0.456120 | tig0013119:-3123 | Msa1353280:CDS |
| AAAACATAATCCTGAATAAG+TGG | 0.459503 | tig0013119:+3505 | None:intergenic |
| ACCAACACCTCTTGAGCCTA+TGG | 0.465547 | tig0013119:-3014 | Msa1353280:CDS |
| TTCTCTTCATCAAAATTACA+AGG | 0.467095 | tig0013119:-3327 | Msa1353280:intron |
| ACCATTTACTAATTGTCGAA+TGG | 0.480098 | tig0013119:-2017 | Msa1353280:CDS |
| GCCAATCCAATCAATGTGCT+TGG | 0.482126 | tig0013119:+3684 | None:intergenic |
| TGAGGCGCAGAAATCACTTC+CGG | 0.494790 | tig0013119:+2890 | None:intergenic |
| AATCTCCCTCGCATGGAGAA+TGG | 0.495676 | tig0013119:+1270 | None:intergenic |
| AGCCTCCGCGTTGGCTTCTG+TGG | 0.496691 | tig0013119:-1867 | Msa1353280:CDS |
| TCACTACTACCACCGTACTT+TGG | 0.497870 | tig0013119:-3559 | Msa1353280:five_prime_UTR |
| TCAATAAGTCCCTACGATAG+AGG | 0.499479 | tig0013119:-1350 | Msa1353280:CDS |
| ATAGTGTTACCACAGTATCA+TGG | 0.500136 | tig0013119:-387 | None:intergenic |
| ATAGGCTCAAGAGGTGTTGG+TGG | 0.501332 | tig0013119:+3016 | None:intergenic |
| TTCTGCTATTCCTCTATCGT+AGG | 0.504764 | tig0013119:+1340 | None:intergenic |
| TCCATAGGCTCAAGAGGTGT+TGG | 0.507446 | tig0013119:+3013 | None:intergenic |
| AACATCTGACACTCAGAAGC+AGG | 0.508571 | tig0013119:+1302 | None:intergenic |
| TGTATATGTCTCAATAGAGT+AGG | 0.509091 | tig0013119:-545 | Msa1353280:three_prime_UTR |
| GAAATAATAATGTGGACTAC+AGG | 0.514469 | tig0013119:-441 | Msa1353280:three_prime_UTR |
| TGTGAGTGGTTAGTAAATGA+TGG | 0.523669 | tig0013119:-3173 | Msa1353280:exon |
| AAAGTGATATGTTTCAACAT+TGG | 0.525411 | tig0013119:-3138 | Msa1353280:CDS |
| CATGGCCATACAGAAAAGAA+AGG | 0.529161 | tig0013119:-764 | Msa1353280:CDS |
| TCTGCTATTCCTCTATCGTA+GGG | 0.529302 | tig0013119:+1341 | None:intergenic |
| TTCTGCTTCTGAGATTTCAA+AGG | 0.533258 | tig0013119:-2966 | Msa1353280:CDS |
| GATGGAATAGAATTTCTACT+TGG | 0.537636 | tig0013119:-648 | Msa1353280:CDS |
| ATCAAAAGCAAGCACATTGG+AGG | 0.543010 | tig0013119:-998 | Msa1353280:CDS |
| CTCAGAAGCAGAAAGACTCC+AGG | 0.544523 | tig0013119:+2976 | None:intergenic |
| GTTGAAATGGCAGAGTTAGC+AGG | 0.552664 | tig0013119:-1770 | Msa1353280:CDS |
| CACTTGCATCAGAAGCAGCA+TGG | 0.555241 | tig0013119:-1974 | Msa1353280:CDS |
| TGCAACAAATCTCCCTCGCA+TGG | 0.556607 | tig0013119:+1263 | None:intergenic |
| ACTTGCATCAGAAGCAGCAT+GGG | 0.561964 | tig0013119:-1973 | Msa1353280:CDS |
| AAGAAATGAAAACCAAAGTA+CGG | 0.564926 | tig0013119:+3547 | None:intergenic |
| GTATAGCTTACCGTTAATTG+AGG | 0.566149 | tig0013119:+2872 | None:intergenic |
| AAGGATCATGGCAATGGCAA+GGG | 0.568181 | tig0013119:-3111 | Msa1353280:CDS |
| CACTTCTACTGTTAATTCTG+CGG | 0.569536 | tig0013119:-1729 | Msa1353280:CDS |
| GCGGTCGATATTCAAACGCC+AGG | 0.569915 | tig0013119:-1710 | Msa1353280:CDS |
| GTGAGAGTCATTAGATCACC+TGG | 0.573410 | tig0013119:+1692 | None:intergenic |
| AATCCTGAATAAGTGGGTAT+GGG | 0.578321 | tig0013119:+3512 | None:intergenic |
| TGTTTCATGTAAGCTTTGAG+AGG | 0.587129 | tig0013119:-1422 | Msa1353280:intron |
| ATGGCCATACAGAAAAGAAA+GGG | 0.589553 | tig0013119:-763 | Msa1353280:CDS |
| GATCTAGACAAGAACTCCAT+AGG | 0.595247 | tig0013119:+2998 | None:intergenic |
| AAGAACTCCATAGGCTCAAG+AGG | 0.596767 | tig0013119:+3007 | None:intergenic |
| AAAGGATCATGGCAATGGCA+AGG | 0.597294 | tig0013119:-3112 | Msa1353280:CDS |
| AAACATAATCCTGAATAAGT+GGG | 0.599991 | tig0013119:+3506 | None:intergenic |
| TCATTTCAGGTGCATTACGA+TGG | 0.604353 | tig0013119:-1149 | Msa1353280:intron |
| GGAGAAAAGGATCATGGCAA+TGG | 0.608247 | tig0013119:-3117 | Msa1353280:CDS |
| ATTGTTCTATGTGTATGTGT+AGG | 0.611832 | tig0013119:+3648 | None:intergenic |
| AAGATCAAAAGCAAGCACAT+TGG | 0.613502 | tig0013119:-1001 | Msa1353280:CDS |
| GAGAACCATTCTCCATGCGA+GGG | 0.616237 | tig0013119:-1275 | Msa1353280:CDS |
| TTTGGCCTCAAAACTGCACA+AGG | 0.625130 | tig0013119:-720 | Msa1353280:CDS |
| TGAGAACCATTCTCCATGCG+AGG | 0.636940 | tig0013119:-1276 | Msa1353280:CDS |
| AAAGGAAGTACCTGTTGCAG+CGG | 0.637979 | tig0013119:+1664 | None:intergenic |
| TGTGTAACGAAGACTCTGCA+TGG | 0.643429 | tig0013119:-782 | Msa1353280:CDS |
| TGATGTACAGAATTTGTGAG+TGG | 0.670251 | tig0013119:-3187 | Msa1353280:intron |
| TTGTGTTAAGAAGAATGTGG+TGG | 0.677334 | tig0013119:+3394 | None:intergenic |
| ATCTGACACTCAGAAGCAGG+AGG | 0.692727 | tig0013119:+1305 | None:intergenic |
| AACCACAGAAGCCAACGCGG+AGG | 0.719869 | tig0013119:+1865 | None:intergenic |
| TGTCAAAATCCATGATACTG+TGG | 0.721439 | tig0013119:+378 | None:intergenic |
| AATTAACAGTAGAAGTGACA+CGG | 0.727195 | tig0013119:+1735 | None:intergenic |
| AAATGAAAACCAAAGTACGG+TGG | 0.727522 | tig0013119:+3550 | None:intergenic |
| AGCAACCACAGAAGCCAACG+CGG | 0.728782 | tig0013119:+1862 | None:intergenic |
| TGCATTACGATGGAAACATG+TGG | 0.750334 | tig0013119:-1139 | Msa1353280:CDS |
| ATAAGATGCTAAGAGCTGTG+TGG | 0.765894 | tig0013119:+1796 | None:intergenic |
| GTGTTGTGTTAAGAAGAATG+TGG | 0.777204 | tig0013119:+3391 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CACAAATATATATATATATA+GGG | + | tig0013119:807-826 | None:intergenic | 10.0% |
| !!! | TAAAAAATTCATAGATTTTT+CGG | + | tig0013119:3482-3501 | None:intergenic | 10.0% |
| !! | AAGAAAAAAACAAAGTAATA+TGG | + | tig0013119:616-635 | None:intergenic | 15.0% |
| !! | AGTAAAGAAAGAATATTATA+AGG | + | tig0013119:656-675 | None:intergenic | 15.0% |
| !! | CCACAAATATATATATATAT+AGG | + | tig0013119:808-827 | None:intergenic | 15.0% |
| !! | CCTATATATATATATATTTG+TGG | - | tig0013119:805-824 | Msa1353280:intron | 15.0% |
| !! | TATAGAAATAGTTTATACAT+AGG | - | tig0013119:1819-1838 | Msa1353280:CDS | 15.0% |
| !!! | AGAAAACAATGTTTTAAAAA+CGG | + | tig0013119:2581-2600 | None:intergenic | 15.0% |
| !!! | TTGTATTTATCTTAATTTTC+AGG | - | tig0013119:3049-3068 | Msa1353280:CDS | 15.0% |
| !!! | TGATTTTTACAATTACATAA+TGG | + | tig0013119:3207-3226 | None:intergenic | 15.0% |
| !! | ACAAAAATGAAATAATAATG+TGG | - | tig0013119:3632-3651 | Msa1353280:five_prime_UTR | 15.0% |
| !! | CTATTAAGTATTAACAAATA+TGG | + | tig0013119:3678-3697 | None:intergenic | 15.0% |
| !! | GCTAAAAAGAAAAAGTTATA+GGG | + | tig0013119:785-804 | None:intergenic | 20.0% |
| !! | ATCAAAGTTTATAAATCAGA+TGG | - | tig0013119:833-852 | Msa1353280:intron | 20.0% |
| !! | TCAAATAATTCAATCCAAAT+AGG | + | tig0013119:1283-1302 | None:intergenic | 20.0% |
| !! | ATTAAGTTATTTATCCAAAC+AGG | - | tig0013119:1867-1886 | Msa1353280:CDS | 20.0% |
| !! | TTAAGTTATTTATCCAAACA+GGG | - | tig0013119:1868-1887 | Msa1353280:CDS | 20.0% |
| !!! | TAGTCTTTTGCTTATTTTTT+AGG | + | tig0013119:1925-1944 | None:intergenic | 20.0% |
| !! | ACATTGATAGAAAAAGATAA+AGG | + | tig0013119:2438-2457 | None:intergenic | 20.0% |
| !!! | CCTCTTAAATTTTTGTTTTT+AGG | + | tig0013119:3009-3028 | None:intergenic | 20.0% |
| !! | CCTAAAAACAAAAATTTAAG+AGG | - | tig0013119:3006-3025 | Msa1353280:CDS | 20.0% |
| !!! | AAAATTTAAGAGGTGAATTT+TGG | - | tig0013119:3016-3035 | Msa1353280:CDS | 20.0% |
| !!! | TTTTGTGATTACATTTTGTA+TGG | + | tig0013119:3618-3637 | None:intergenic | 20.0% |
| ! | AAGAAATGAAAACCAAAGTA+CGG | + | tig0013119:537-556 | None:intergenic | 25.0% |
| ! | AAACATAATCCTGAATAAGT+GGG | + | tig0013119:578-597 | None:intergenic | 25.0% |
| ! | AAAACATAATCCTGAATAAG+TGG | + | tig0013119:579-598 | None:intergenic | 25.0% |
| !!! | TAATTTTGATGAAGAGAAGA+AGG | + | tig0013119:752-771 | None:intergenic | 25.0% |
| ! | TTCTCTTCATCAAAATTACA+AGG | - | tig0013119:754-773 | Msa1353280:CDS | 25.0% |
| ! | GGCTAAAAAGAAAAAGTTAT+AGG | + | tig0013119:786-805 | None:intergenic | 25.0% |
| ! | AAAGTGATATGTTTCAACAT+TGG | - | tig0013119:943-962 | Msa1353280:intron | 25.0% |
| ! | GATTCAATGAATAGTTAACA+AGG | + | tig0013119:1234-1253 | None:intergenic | 25.0% |
| !! | AGTATTTTCATAAGCTATTC+TGG | - | tig0013119:1512-1531 | Msa1353280:intron | 25.0% |
| ! | AAGCATTTGTGAGATTATTT+AGG | + | tig0013119:1589-1608 | None:intergenic | 25.0% |
| ! | ATAAAGAGTAACAACATGTT+TGG | - | tig0013119:1972-1991 | Msa1353280:CDS | 25.0% |
| ! | GTAAGTTGTAAGATTTGATA+TGG | - | tig0013119:2607-2626 | Msa1353280:intron | 25.0% |
| ! | TTGATATGGAACAATATTGA+TGG | - | tig0013119:2621-2640 | Msa1353280:intron | 25.0% |
| !! | TAGTTGATGTATTTCATTTC+AGG | - | tig0013119:2919-2938 | Msa1353280:CDS | 25.0% |
| ! | TTACATCAACAAGAAATATC+AGG | - | tig0013119:2969-2988 | Msa1353280:CDS | 25.0% |
| !! | ATGCTTACATTTATGCTTTT+TGG | + | tig0013119:3117-3136 | None:intergenic | 25.0% |
| ! | TTTCTCCAGAAATTTCTTTA+TGG | - | tig0013119:3228-3247 | Msa1353280:intron | 25.0% |
| ! | AAGAACCATAAAGAAATTTC+TGG | + | tig0013119:3236-3255 | None:intergenic | 25.0% |
| ATTGTTCTATGTGTATGTGT+AGG | + | tig0013119:436-455 | None:intergenic | 30.0% | |
| AACCAACGTTGTAACTAAAA+AGG | - | tig0013119:498-517 | Msa1353280:three_prime_UTR | 30.0% | |
| !!! | AACCTTTTTAGTTACAACGT+TGG | + | tig0013119:503-522 | None:intergenic | 30.0% |
| ATGTTTCAACATTGGAGAAA+AGG | - | tig0013119:951-970 | Msa1353280:intron | 30.0% | |
| TAAGACTCATGAAACATTAC+CGG | - | tig0013119:1172-1191 | Msa1353280:intron | 30.0% | |
| !! | TGTTGACTAGCAATACATTT+TGG | - | tig0013119:1256-1275 | Msa1353280:CDS | 30.0% |
| ! | GTTGACTAGCAATACATTTT+GGG | - | tig0013119:1257-1276 | Msa1353280:CDS | 30.0% |
| TTGAGTTTATCTACTAGCAT+AGG | - | tig0013119:1299-1318 | Msa1353280:CDS | 30.0% | |
| !! | ACTTATTTTCATAAGCTCTC+TGG | - | tig0013119:1733-1752 | Msa1353280:CDS | 30.0% |
| !! | CTTATTTTCATAAGCTCTCT+GGG | - | tig0013119:1734-1753 | Msa1353280:CDS | 30.0% |
| ATAAAGTTGAAACCCTGATA+TGG | - | tig0013119:1945-1964 | Msa1353280:CDS | 30.0% | |
| ! | CTCTTTATTTGTCCATATCA+GGG | + | tig0013119:1960-1979 | None:intergenic | 30.0% |
| ! | ACTCTTTATTTGTCCATATC+AGG | + | tig0013119:1961-1980 | None:intergenic | 30.0% |
| ACCATTTACTAATTGTCGAA+TGG | - | tig0013119:2064-2083 | Msa1353280:intron | 30.0% | |
| CCATTTACTAATTGTCGAAT+GGG | - | tig0013119:2065-2084 | Msa1353280:intron | 30.0% | |
| TAGTGACAATCACTCTAAAT+TGG | - | tig0013119:2244-2263 | Msa1353280:intron | 30.0% | |
| AGCATCTTATTGTGTTGAAA+TGG | - | tig0013119:2298-2317 | Msa1353280:intron | 30.0% | |
| AATTAACAGTAGAAGTGACA+CGG | + | tig0013119:2349-2368 | None:intergenic | 30.0% | |
| AACTGACATTATCTATGGTT+TGG | - | tig0013119:2508-2527 | Msa1353280:intron | 30.0% | |
| !!! | GTTCAATTACGATTTTTTCG+TGG | - | tig0013119:2542-2561 | Msa1353280:intron | 30.0% |
| ! | GCATTTTTCTTTGCTTCTTT+TGG | + | tig0013119:2710-2729 | None:intergenic | 30.0% |
| GAGTCTAGATTGATTATTGT+AGG | - | tig0013119:3262-3281 | Msa1353280:intron | 30.0% | |
| TAGATTGATTATTGTAGGTG+TGG | - | tig0013119:3267-3286 | Msa1353280:intron | 30.0% | |
| ATTATTGTAGGTGTGGTTTA+TGG | - | tig0013119:3274-3293 | Msa1353280:intron | 30.0% | |
| GATGGAATAGAATTTCTACT+TGG | - | tig0013119:3433-3452 | Msa1353280:five_prime_UTR | 30.0% | |
| TGTATATGTCTCAATAGAGT+AGG | - | tig0013119:3536-3555 | Msa1353280:five_prime_UTR | 30.0% | |
| ! | GAAATAATAATGTGGACTAC+AGG | - | tig0013119:3640-3659 | Msa1353280:five_prime_UTR | 30.0% |
| AAATGAAAACCAAAGTACGG+TGG | + | tig0013119:534-553 | None:intergenic | 35.0% | |
| AATCCTGAATAAGTGGGTAT+GGG | + | tig0013119:572-591 | None:intergenic | 35.0% | |
| TAATCCTGAATAAGTGGGTA+TGG | + | tig0013119:573-592 | None:intergenic | 35.0% | |
| TTGTGTTAAGAAGAATGTGG+TGG | + | tig0013119:690-709 | None:intergenic | 35.0% | |
| GTGTTGTGTTAAGAAGAATG+TGG | + | tig0013119:693-712 | None:intergenic | 35.0% | |
| ATCAGTTGAGAGTGAGATAT+AGG | + | tig0013119:724-743 | None:intergenic | 35.0% | |
| TGATGTACAGAATTTGTGAG+TGG | - | tig0013119:894-913 | Msa1353280:intron | 35.0% | |
| TGTGAGTGGTTAGTAAATGA+TGG | - | tig0013119:908-927 | Msa1353280:intron | 35.0% | |
| AACATTGGAGAAAAGGATCA+TGG | - | tig0013119:958-977 | Msa1353280:intron | 35.0% | |
| !! | TTCTGCTTCTGAGATTTCAA+AGG | - | tig0013119:1115-1134 | Msa1353280:CDS | 35.0% |
| GTATAGCTTACCGTTAATTG+AGG | + | tig0013119:1212-1231 | None:intergenic | 35.0% | |
| ! | CAATACATTTTGGGCCTATT+TGG | - | tig0013119:1266-1285 | Msa1353280:CDS | 35.0% |
| CACAAATGCTTAATGCATTC+TGG | - | tig0013119:1598-1617 | Msa1353280:intron | 35.0% | |
| AGAGTAACAACATGTTTGGT+TGG | - | tig0013119:1976-1995 | Msa1353280:CDS | 35.0% | |
| CCCATTCGACAATTAGTAAA+TGG | + | tig0013119:2068-2087 | None:intergenic | 35.0% | |
| AATTGTCGAATGGGTACTAT+TGG | - | tig0013119:2074-2093 | Msa1353280:intron | 35.0% | |
| GAATGGGTACTATTGGAAAA+TGG | - | tig0013119:2081-2100 | Msa1353280:intron | 35.0% | |
| CTCTAAATTGGATGTTGCTA+TGG | - | tig0013119:2256-2275 | Msa1353280:intron | 35.0% | |
| CACTTCTACTGTTAATTCTG+CGG | - | tig0013119:2352-2371 | Msa1353280:intron | 35.0% | |
| CTGTGAACTGACATTATCTA+TGG | - | tig0013119:2503-2522 | Msa1353280:intron | 35.0% | |
| !!! | TTTTTTCGTGGTTCAATGTC+TGG | - | tig0013119:2554-2573 | Msa1353280:intron | 35.0% |
| !! | TGTTTCATGTAAGCTTTGAG+AGG | - | tig0013119:2659-2678 | Msa1353280:intron | 35.0% |
| AAGATCAAAAGCAAGCACAT+TGG | - | tig0013119:3080-3099 | Msa1353280:CDS | 35.0% | |
| ATGGCCATACAGAAAAGAAA+GGG | - | tig0013119:3318-3337 | Msa1353280:intron | 35.0% | |
| !! | GCTTCTGAAGATCTCTATTT+TGG | - | tig0013119:3343-3362 | Msa1353280:five_prime_UTR | 35.0% |
| CAAACTCCACAAGCAAAAAT+GGG | - | tig0013119:3408-3427 | Msa1353280:five_prime_UTR | 35.0% | |
| !! | GTAGCAGTTCTTGATTTGTT+TGG | - | tig0013119:3509-3528 | Msa1353280:five_prime_UTR | 35.0% |
| ! | GATTACATTTTGTATGGCAG+AGG | + | tig0013119:3612-3631 | None:intergenic | 35.0% |
| ! | TCCAAGCACATTGATTGGAT+TGG | - | tig0013119:396-415 | Msa1353280:three_prime_UTR | 40.0% |
| GATCTAGACAAGAACTCCAT+AGG | + | tig0013119:1086-1105 | None:intergenic | 40.0% | |
| GATTTCTGCGCCTCAATTAA+CGG | - | tig0013119:1199-1218 | Msa1353280:intron | 40.0% | |
| TTATGGATCCATAAGCTCTC+AGG | - | tig0013119:1348-1367 | Msa1353280:CDS | 40.0% | |
| TATGGATCCATAAGCTCTCA+GGG | - | tig0013119:1349-1368 | Msa1353280:CDS | 40.0% | |
| TCTGGAGAGCTTATAGAAGT+AGG | - | tig0013119:1530-1549 | Msa1353280:intron | 40.0% | |
| ! | AGTAGGTTGAAAACAGCTTC+TGG | - | tig0013119:1547-1566 | Msa1353280:intron | 40.0% |
| TGCTTAATGCATTCTGGATC+AGG | - | tig0013119:1604-1623 | Msa1353280:intron | 40.0% | |
| TAAACCCTTGTGAGACTGTT+TGG | - | tig0013119:1664-1683 | Msa1353280:intron | 40.0% | |
| AAACCCTTGTGAGACTGTTT+GGG | - | tig0013119:1665-1684 | Msa1353280:intron | 40.0% | |
| TATCCCAAACAGTCTCACAA+GGG | + | tig0013119:1671-1690 | None:intergenic | 40.0% | |
| TGTGGAAACAGCTTATGACA+TGG | - | tig0013119:1694-1713 | Msa1353280:CDS | 40.0% | |
| GTAAATGGTATGAGCTTTCC+AGG | + | tig0013119:2053-2072 | None:intergenic | 40.0% | |
| ATAAGATGCTAAGAGCTGTG+TGG | + | tig0013119:2288-2307 | None:intergenic | 40.0% | |
| AACTGAACCAGACAGTTCAA+CGG | - | tig0013119:2469-2488 | Msa1353280:intron | 40.0% | |
| ! | CTATGGTTTGGCTATTTGAG+TGG | - | tig0013119:2520-2539 | Msa1353280:intron | 40.0% |
| TCAATAAGTCCCTACGATAG+AGG | - | tig0013119:2731-2750 | Msa1353280:intron | 40.0% | |
| TCTGCTATTCCTCTATCGTA+GGG | + | tig0013119:2743-2762 | None:intergenic | 40.0% | |
| TTCTGCTATTCCTCTATCGT+AGG | + | tig0013119:2744-2763 | None:intergenic | 40.0% | |
| TTGTTGCAGGTTACGGAAAA+AGG | - | tig0013119:2833-2852 | Msa1353280:intron | 40.0% | |
| ! | TCATTTCAGGTGCATTACGA+TGG | - | tig0013119:2932-2951 | Msa1353280:CDS | 40.0% |
| TGCATTACGATGGAAACATG+TGG | - | tig0013119:2942-2961 | Msa1353280:CDS | 40.0% | |
| ATCAAAAGCAAGCACATTGG+AGG | - | tig0013119:3083-3102 | Msa1353280:CDS | 40.0% | |
| CATGGCCATACAGAAAAGAA+AGG | - | tig0013119:3317-3336 | Msa1353280:intron | 40.0% | |
| ! | GCTTCCCTTTCTTTTCTGTA+TGG | + | tig0013119:3325-3344 | None:intergenic | 40.0% |
| GCAAACTCCACAAGCAAAAA+TGG | - | tig0013119:3407-3426 | Msa1353280:five_prime_UTR | 40.0% | |
| !! | CATCAACCCATTTTTGCTTG+TGG | + | tig0013119:3417-3436 | None:intergenic | 40.0% |
| !! | CACAAGCAAAAATGGGTTGA+TGG | - | tig0013119:3415-3434 | Msa1353280:five_prime_UTR | 40.0% |
| ACTGGTCCAAGCACATTGAT+TGG | - | tig0013119:391-410 | Msa1353280:three_prime_UTR | 45.0% | |
| GCCAATCCAATCAATGTGCT+TGG | + | tig0013119:400-419 | None:intergenic | 45.0% | |
| TCACTACTACCACCGTACTT+TGG | - | tig0013119:522-541 | Msa1353280:three_prime_UTR | 45.0% | |
| GAACCCATACCCACTTATTC+AGG | - | tig0013119:566-585 | Msa1353280:exon | 45.0% | |
| GGAGAAAAGGATCATGGCAA+TGG | - | tig0013119:964-983 | Msa1353280:intron | 45.0% | |
| AAAGGATCATGGCAATGGCA+AGG | - | tig0013119:969-988 | Msa1353280:intron | 45.0% | |
| AAGGATCATGGCAATGGCAA+GGG | - | tig0013119:970-989 | Msa1353280:intron | 45.0% | |
| AAGAACTCCATAGGCTCAAG+AGG | + | tig0013119:1077-1096 | None:intergenic | 45.0% | |
| TGGAGTTCTTGTCTAGATCC+TGG | - | tig0013119:1087-1106 | Msa1353280:intron | 45.0% | |
| TATGGATCCATAAGCTCTCC+TGG | + | tig0013119:1341-1360 | None:intergenic | 45.0% | |
| AAGTTGTCCCTGAGAGCTTA+TGG | + | tig0013119:1359-1378 | None:intergenic | 45.0% | |
| CTATCCCAAACAGTCTCACA+AGG | + | tig0013119:1672-1691 | None:intergenic | 45.0% | |
| ! | AGACTGTTTGGGATAGCTTG+TGG | - | tig0013119:1676-1695 | Msa1353280:CDS | 45.0% |
| ! | CTACTGCTATTTGCCCTGTT+TGG | + | tig0013119:1884-1903 | None:intergenic | 45.0% |
| ! | TGTGTTCATCTTTTGCAGCC+TGG | - | tig0013119:2032-2051 | Msa1353280:CDS | 45.0% |
| ACTTGCATCAGAAGCAGCAT+GGG | - | tig0013119:2108-2127 | Msa1353280:intron | 45.0% | |
| CATTCTGCACTGTCAATTGC+CGG | - | tig0013119:2188-2207 | Msa1353280:intron | 45.0% | |
| GTTGAAATGGCAGAGTTAGC+AGG | - | tig0013119:2311-2330 | Msa1353280:intron | 45.0% | |
| GTGAGAGTCATTAGATCACC+TGG | + | tig0013119:2392-2411 | None:intergenic | 45.0% | |
| !! | AAAGGAAGTACCTGTTGCAG+CGG | + | tig0013119:2420-2439 | None:intergenic | 45.0% |
| ACGTTAACCGTTGAACTGTC+TGG | + | tig0013119:2479-2498 | None:intergenic | 45.0% | |
| AACATCTGACACTCAGAAGC+AGG | + | tig0013119:2782-2801 | None:intergenic | 45.0% | |
| !! | GGGAGATTTGTTGCAGGTTA+CGG | - | tig0013119:2826-2845 | Msa1353280:intron | 45.0% |
| TGTGTAACGAAGACTCTGCA+TGG | - | tig0013119:3299-3318 | Msa1353280:intron | 45.0% | |
| TTTGGCCTCAAAACTGCACA+AGG | - | tig0013119:3361-3380 | Msa1353280:five_prime_UTR | 45.0% | |
| ! | GAAGACCTTGTGCAGTTTTG+AGG | + | tig0013119:3369-3388 | None:intergenic | 45.0% |
| TGGACTACAGGAACTGCTTA+TGG | - | tig0013119:3652-3671 | Msa1353280:five_prime_UTR | 45.0% | |
| ! | AGCGCGTTTTCGTACGTAGT+AGG | + | tig0013119:472-491 | None:intergenic | 50.0% |
| !! | GTTGGTGGCTCAGGAATTTC+TGG | + | tig0013119:1053-1072 | None:intergenic | 50.0% |
| !! | ATAGGCTCAAGAGGTGTTGG+TGG | + | tig0013119:1068-1087 | None:intergenic | 50.0% |
| ACCAACACCTCTTGAGCCTA+TGG | - | tig0013119:1067-1086 | Msa1353280:intron | 50.0% | |
| ! | TCCATAGGCTCAAGAGGTGT+TGG | + | tig0013119:1071-1090 | None:intergenic | 50.0% |
| CTCAGAAGCAGAAAGACTCC+AGG | + | tig0013119:1108-1127 | None:intergenic | 50.0% | |
| TGAGGCGCAGAAATCACTTC+CGG | + | tig0013119:1194-1213 | None:intergenic | 50.0% | |
| ATCCATAAGCTCTCCTGGAC+GGG | + | tig0013119:1336-1355 | None:intergenic | 50.0% | |
| GATCCATAAGCTCTCCTGGA+CGG | + | tig0013119:1337-1356 | None:intergenic | 50.0% | |
| CACTTGCATCAGAAGCAGCA+TGG | - | tig0013119:2107-2126 | Msa1353280:intron | 50.0% | |
| ATCTGACACTCAGAAGCAGG+AGG | + | tig0013119:2779-2798 | None:intergenic | 50.0% | |
| TGAGAACCATTCTCCATGCG+AGG | - | tig0013119:2805-2824 | Msa1353280:intron | 50.0% | |
| GAGAACCATTCTCCATGCGA+GGG | - | tig0013119:2806-2825 | Msa1353280:intron | 50.0% | |
| AATCTCCCTCGCATGGAGAA+TGG | + | tig0013119:2814-2833 | None:intergenic | 50.0% | |
| TGCAACAAATCTCCCTCGCA+TGG | + | tig0013119:2821-2840 | None:intergenic | 50.0% | |
| !! | ATGCGAGGGAGATTTGTTGC+AGG | - | tig0013119:2820-2839 | Msa1353280:intron | 50.0% |
| !! | TCAAGAGGTGTTGGTGGCTC+AGG | + | tig0013119:1062-1081 | None:intergenic | 55.0% |
| GGTATTTGTGATGCCCGTCC+AGG | - | tig0013119:1320-1339 | Msa1353280:CDS | 55.0% | |
| AGCAACCACAGAAGCCAACG+CGG | + | tig0013119:2222-2241 | None:intergenic | 55.0% | |
| GCGGTCGATATTCAAACGCC+AGG | - | tig0013119:2371-2390 | Msa1353280:intron | 55.0% | |
| TGCCCGTCCAGGAGAGCTTA+TGG | - | tig0013119:1331-1350 | Msa1353280:CDS | 60.0% | |
| AACCACAGAAGCCAACGCGG+AGG | + | tig0013119:2219-2238 | None:intergenic | 60.0% | |
| ! | AGCCAACGCGGAGGCTAGTC+CGG | + | tig0013119:2210-2229 | None:intergenic | 65.0% |
| !! | AGCCTCCGCGTTGGCTTCTG+TGG | - | tig0013119:2214-2233 | Msa1353280:intron | 65.0% |
| CTCACTGCTGCCGCTGCAAC+AGG | - | tig0013119:2407-2426 | Msa1353280:intron | 65.0% | |
| !! | TGCCGGACTAGCCTCCGCGT+TGG | - | tig0013119:2205-2224 | Msa1353280:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0013119 | gene | 390 | 3713 | 390 | ID=Msa1353280;Name=Msa1353280 |
| tig0013119 | mRNA | 390 | 3713 | 390 | ID=Msa1353280-mRNA-1;Parent=Msa1353280;Name=Msa1353280-mRNA-1;_AED=0.04;_eAED=0.04;_QI=406|1|1|1|0.83|0.71|7|191|401 |
| tig0013119 | exon | 390 | 819 | 390 | ID=Msa1353280-mRNA-1:exon:8587;Parent=Msa1353280-mRNA-1 |
| tig0013119 | exon | 975 | 1032 | 975 | ID=Msa1353280-mRNA-1:exon:8586;Parent=Msa1353280-mRNA-1 |
| tig0013119 | exon | 1113 | 1162 | 1113 | ID=Msa1353280-mRNA-1:exon:8585;Parent=Msa1353280-mRNA-1 |
| tig0013119 | exon | 1249 | 1431 | 1249 | ID=Msa1353280-mRNA-1:exon:8584;Parent=Msa1353280-mRNA-1 |
| tig0013119 | exon | 1675 | 2053 | 1675 | ID=Msa1353280-mRNA-1:exon:8583;Parent=Msa1353280-mRNA-1 |
| tig0013119 | exon | 2883 | 3199 | 2883 | ID=Msa1353280-mRNA-1:exon:8582;Parent=Msa1353280-mRNA-1 |
| tig0013119 | exon | 3328 | 3713 | 3328 | ID=Msa1353280-mRNA-1:exon:8581;Parent=Msa1353280-mRNA-1 |
| tig0013119 | five_prime_UTR | 3328 | 3713 | 3328 | ID=Msa1353280-mRNA-1:five_prime_utr;Parent=Msa1353280-mRNA-1 |
| tig0013119 | five_prime_UTR | 3180 | 3199 | 3180 | ID=Msa1353280-mRNA-1:five_prime_utr;Parent=Msa1353280-mRNA-1 |
| tig0013119 | CDS | 2883 | 3179 | 2883 | ID=Msa1353280-mRNA-1:cds;Parent=Msa1353280-mRNA-1 |
| tig0013119 | CDS | 1675 | 2053 | 1675 | ID=Msa1353280-mRNA-1:cds;Parent=Msa1353280-mRNA-1 |
| tig0013119 | CDS | 1249 | 1431 | 1249 | ID=Msa1353280-mRNA-1:cds;Parent=Msa1353280-mRNA-1 |
| tig0013119 | CDS | 1113 | 1162 | 1113 | ID=Msa1353280-mRNA-1:cds;Parent=Msa1353280-mRNA-1 |
| tig0013119 | CDS | 975 | 1032 | 975 | ID=Msa1353280-mRNA-1:cds;Parent=Msa1353280-mRNA-1 |
| tig0013119 | CDS | 581 | 819 | 581 | ID=Msa1353280-mRNA-1:cds;Parent=Msa1353280-mRNA-1 |
| tig0013119 | three_prime_UTR | 390 | 580 | 390 | ID=Msa1353280-mRNA-1:three_prime_utr;Parent=Msa1353280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
