Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796460 | XP_003611333.2 | 96.915 | 389 | 11 | 1 | 1 | 389 | 1 | 388 | 0.0 | 787 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796460 | sp|Q8W4K5|VAB_ARATH | 37.662 | 308 | 143 | 6 | 105 | 379 | 189 | 480 | 8.84e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796460 | G7JXD4 | 96.915 | 389 | 11 | 1 | 1 | 389 | 1 | 388 | 0.0 | 787 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005630 | Msa0796460 | 0.825941 | 3.562425e-54 | -8.615850e-47 |
| Msa0008850 | Msa0796460 | 0.805473 | 1.312403e-49 | -8.615850e-47 |
| Msa0021980 | Msa0796460 | 0.845496 | 3.917952e-59 | -8.615850e-47 |
| Msa0028280 | Msa0796460 | 0.809328 | 1.997365e-50 | -8.615850e-47 |
| Msa0039200 | Msa0796460 | 0.828666 | 7.918623e-55 | -8.615850e-47 |
| Msa0041780 | Msa0796460 | 0.822106 | 2.829309e-53 | -8.615850e-47 |
| Msa0047470 | Msa0796460 | 0.806893 | 6.592816e-50 | -8.615850e-47 |
| Msa0051100 | Msa0796460 | 0.807104 | 5.948691e-50 | -8.615850e-47 |
| Msa0053480 | Msa0796460 | 0.812554 | 3.999495e-51 | -8.615850e-47 |
| Msa0053960 | Msa0796460 | 0.817207 | 3.717852e-52 | -8.615850e-47 |
| Msa0057740 | Msa0796460 | 0.818142 | 2.287145e-52 | -8.615850e-47 |
| Msa0070090 | Msa0796460 | 0.845109 | 4.983372e-59 | -8.615850e-47 |
| Msa0086820 | Msa0796460 | 0.828437 | 8.994027e-55 | -8.615850e-47 |
| Msa0089530 | Msa0796460 | 0.820458 | 6.788552e-53 | -8.615850e-47 |
| Msa0096570 | Msa0796460 | 0.818221 | 2.194531e-52 | -8.615850e-47 |
| Msa0103060 | Msa0796460 | 0.833697 | 4.596276e-56 | -8.615850e-47 |
| Msa0117300 | Msa0796460 | 0.829080 | 6.288304e-55 | -8.615850e-47 |
| Msa0605230 | Msa0796460 | 0.824810 | 6.595918e-54 | -8.615850e-47 |
| Msa0606680 | Msa0796460 | 0.819726 | 9.981107e-53 | -8.615850e-47 |
| Msa0616910 | Msa0796460 | 0.801199 | 1.007675e-48 | -8.615850e-47 |
| Msa0617370 | Msa0796460 | 0.814696 | 1.350516e-51 | -8.615850e-47 |
| Msa0623360 | Msa0796460 | 0.825369 | 4.867709e-54 | -8.615850e-47 |
| Msa0630850 | Msa0796460 | 0.852039 | 5.997117e-61 | -8.615850e-47 |
| Msa0635990 | Msa0796460 | 0.814436 | 1.542011e-51 | -8.615850e-47 |
| Msa0639030 | Msa0796460 | 0.829011 | 6.535252e-55 | -8.615850e-47 |
| Msa0646390 | Msa0796460 | 0.807352 | 5.272408e-50 | -8.615850e-47 |
| Msa0648170 | Msa0796460 | 0.812713 | 3.691626e-51 | -8.615850e-47 |
| Msa0648200 | Msa0796460 | 0.828192 | 1.030864e-54 | -8.615850e-47 |
| Msa0648300 | Msa0796460 | 0.858697 | 6.895106e-63 | -8.615850e-47 |
| Msa0653710 | Msa0796460 | 0.831432 | 1.674738e-55 | -8.615850e-47 |
| Msa0656270 | Msa0796460 | 0.818102 | 2.335660e-52 | -8.615850e-47 |
| Msa0656680 | Msa0796460 | 0.800754 | 1.242760e-48 | -8.615850e-47 |
| Msa0657820 | Msa0796460 | 0.804694 | 1.909807e-49 | -8.615850e-47 |
| Msa0664110 | Msa0796460 | 0.815141 | 1.076025e-51 | -8.615850e-47 |
| Msa0664130 | Msa0796460 | 0.830591 | 2.693935e-55 | -8.615850e-47 |
| Msa0681880 | Msa0796460 | 0.831416 | 1.690083e-55 | -8.615850e-47 |
| Msa0682730 | Msa0796460 | -0.842693 | 2.212240e-58 | -8.615850e-47 |
| Msa0685880 | Msa0796460 | 0.805353 | 1.390467e-49 | -8.615850e-47 |
| Msa0697600 | Msa0796460 | 0.835969 | 1.231522e-56 | -8.615850e-47 |
| Msa0700070 | Msa0796460 | 0.812088 | 5.053662e-51 | -8.615850e-47 |
| Msa0722930 | Msa0796460 | 0.818835 | 1.592691e-52 | -8.615850e-47 |
| Msa0723140 | Msa0796460 | 0.823865 | 1.100310e-53 | -8.615850e-47 |
| Msa0724050 | Msa0796460 | 0.814634 | 1.393897e-51 | -8.615850e-47 |
| Msa0726610 | Msa0796460 | 0.810639 | 1.043213e-50 | -8.615850e-47 |
| Msa0736930 | Msa0796460 | 0.823358 | 1.446181e-53 | -8.615850e-47 |
| Msa0738600 | Msa0796460 | 0.833092 | 6.503808e-56 | -8.615850e-47 |
| Msa0739610 | Msa0796460 | 0.832918 | 7.185454e-56 | -8.615850e-47 |
| Msa0756440 | Msa0796460 | 0.806022 | 1.006346e-49 | -8.615850e-47 |
| Msa0756940 | Msa0796460 | 0.800548 | 1.368875e-48 | -8.615850e-47 |
| Msa0763880 | Msa0796460 | 0.816808 | 4.569739e-52 | -8.615850e-47 |
| Msa0763910 | Msa0796460 | 0.817917 | 2.571887e-52 | -8.615850e-47 |
| Msa0766880 | Msa0796460 | 0.827695 | 1.357509e-54 | -8.615850e-47 |
| Msa0772040 | Msa0796460 | 0.835056 | 2.095253e-56 | -8.615850e-47 |
| Msa0773290 | Msa0796460 | 0.829387 | 5.297067e-55 | -8.615850e-47 |
| Msa0775420 | Msa0796460 | 0.814833 | 1.259788e-51 | -8.615850e-47 |
| Msa0778580 | Msa0796460 | 0.840696 | 7.443164e-58 | -8.615850e-47 |
| Msa0782030 | Msa0796460 | 0.846260 | 2.428619e-59 | -8.615850e-47 |
| Msa0796450 | Msa0796460 | 0.808981 | 2.371072e-50 | -8.615850e-47 |
| Msa0796460 | Msa0801390 | 0.807333 | 5.321164e-50 | -8.615850e-47 |
| Msa0796460 | Msa0807980 | 0.832941 | 7.090221e-56 | -8.615850e-47 |
| Msa0796460 | Msa0815950 | 0.854516 | 1.168754e-61 | -8.615850e-47 |
| Msa0796460 | Msa0818950 | 0.834053 | 3.743050e-56 | -8.615850e-47 |
| Msa0796460 | Msa0819670 | 0.811092 | 8.321208e-51 | -8.615850e-47 |
| Msa0796460 | Msa0822370 | 0.846796 | 1.734219e-59 | -8.615850e-47 |
| Msa0796460 | Msa0824770 | 0.808488 | 3.022042e-50 | -8.615850e-47 |
| Msa0796460 | Msa0834200 | 0.842737 | 2.153379e-58 | -8.615850e-47 |
| Msa0796460 | Msa0834240 | 0.843411 | 1.424999e-58 | -8.615850e-47 |
| Msa0796460 | Msa0835550 | 0.829150 | 6.047475e-55 | -8.615850e-47 |
| Msa0796460 | Msa0839730 | 0.808276 | 3.354014e-50 | -8.615850e-47 |
| Msa0796460 | Msa0843280 | 0.800030 | 1.744713e-48 | -8.615850e-47 |
| Msa0796460 | Msa0844100 | 0.830426 | 2.957371e-55 | -8.615850e-47 |
| Msa0796460 | Msa0861480 | 0.840222 | 9.900468e-58 | -8.615850e-47 |
| Msa0796460 | Msa0861560 | 0.849193 | 3.782659e-60 | -8.615850e-47 |
| Msa0796460 | Msa0861800 | 0.854430 | 1.237562e-61 | -8.615850e-47 |
| Msa0796460 | Msa0871310 | 0.843537 | 1.318495e-58 | -8.615850e-47 |
| Msa0796460 | Msa0873010 | 0.822920 | 1.829546e-53 | -8.615850e-47 |
| Msa0796460 | Msa0883410 | 0.815057 | 1.123340e-51 | -8.615850e-47 |
| Msa0796460 | Msa0883660 | 0.816960 | 4.224713e-52 | -8.615850e-47 |
| Msa0796460 | Msa0883670 | 0.827053 | 1.934901e-54 | -8.615850e-47 |
| Msa0796460 | Msa0883700 | 0.804919 | 1.714610e-49 | -8.615850e-47 |
| Msa0796460 | Msa0887000 | 0.829901 | 3.971597e-55 | -8.615850e-47 |
| Msa0796460 | Msa0887070 | 0.840266 | 9.641969e-58 | -8.615850e-47 |
| Msa0796460 | Msa0895860 | 0.811043 | 8.527059e-51 | -8.615850e-47 |
| Msa0796460 | Msa0897390 | 0.830713 | 2.515405e-55 | -8.615850e-47 |
| Msa0796460 | Msa0899730 | 0.821407 | 4.105599e-53 | -8.615850e-47 |
| Msa0796460 | Msa0906280 | 0.821328 | 4.280785e-53 | -8.615850e-47 |
| Msa0796460 | Msa0924820 | 0.805891 | 1.072565e-49 | -8.615850e-47 |
| Msa0796460 | Msa0924970 | 0.800167 | 1.636038e-48 | -8.615850e-47 |
| Msa0796460 | Msa0927890 | 0.810757 | 9.836457e-51 | -8.615850e-47 |
| Msa0796460 | Msa0934830 | 0.810707 | 1.008048e-50 | -8.615850e-47 |
| Msa0796460 | Msa0942300 | 0.802227 | 6.200676e-49 | -8.615850e-47 |
| Msa0796460 | Msa0946300 | 0.807549 | 4.788478e-50 | -8.615850e-47 |
| Msa0796460 | Msa0950410 | 0.800586 | 1.344411e-48 | -8.615850e-47 |
| Msa0796460 | Msa0964650 | 0.831595 | 1.527472e-55 | -8.615850e-47 |
| Msa0796460 | Msa0978000 | 0.815227 | 1.029742e-51 | -8.615850e-47 |
| Msa0796460 | Msa0984820 | 0.800043 | 1.734580e-48 | -8.615850e-47 |
| Msa0796460 | Msa0984850 | 0.825388 | 4.815957e-54 | -8.615850e-47 |
| Msa0796460 | Msa0984860 | 0.835114 | 2.025333e-56 | -8.615850e-47 |
| Msa0796460 | Msa0985040 | 0.806055 | 9.905244e-50 | -8.615850e-47 |
| Msa0796460 | Msa0988500 | 0.813027 | 3.150078e-51 | -8.615850e-47 |
| Msa0796460 | Msa0995220 | 0.841175 | 5.573777e-58 | -8.615850e-47 |
| Msa0796460 | Msa0995660 | 0.803522 | 3.349753e-49 | -8.615850e-47 |
| Msa0796460 | Msa0999590 | 0.801226 | 9.952363e-49 | -8.615850e-47 |
| Msa0796460 | Msa1008960 | 0.827834 | 1.256688e-54 | -8.615850e-47 |
| Msa0796460 | Msa1016130 | 0.848836 | 4.755386e-60 | -8.615850e-47 |
| Msa0796460 | Msa1024580 | 0.822970 | 1.781705e-53 | -8.615850e-47 |
| Msa0796460 | Msa1026720 | 0.833765 | 4.418939e-56 | -8.615850e-47 |
| Msa0796460 | Msa1030430 | 0.834300 | 3.245500e-56 | -8.615850e-47 |
| Msa0796460 | Msa1031220 | 0.807638 | 4.583161e-50 | -8.615850e-47 |
| Msa0796460 | Msa1036360 | 0.808380 | 3.187031e-50 | -8.615850e-47 |
| Msa0796460 | Msa1038110 | 0.837171 | 6.085173e-57 | -8.615850e-47 |
| Msa0796460 | Msa1038820 | 0.811436 | 7.007971e-51 | -8.615850e-47 |
| Msa0796460 | Msa1040730 | -0.805377 | 1.374921e-49 | -8.615850e-47 |
| Msa0796460 | Msa1041550 | 0.806410 | 8.340354e-50 | -8.615850e-47 |
| Msa0796460 | Msa1043870 | 0.818222 | 2.194002e-52 | -8.615850e-47 |
| Msa0796460 | Msa1044450 | 0.836363 | 9.776329e-57 | -8.615850e-47 |
| Msa0796460 | Msa1049440 | 0.818556 | 1.842728e-52 | -8.615850e-47 |
| Msa0796460 | Msa1050320 | 0.804820 | 1.798146e-49 | -8.615850e-47 |
| Msa0796460 | Msa1053990 | -0.824267 | 8.855536e-54 | -8.615850e-47 |
| Msa0796460 | Msa1063180 | 0.832368 | 9.836439e-56 | -8.615850e-47 |
| Msa0796460 | Msa1063490 | 0.810624 | 1.051046e-50 | -8.615850e-47 |
| Msa0796460 | Msa1067710 | 0.816648 | 4.961553e-52 | -8.615850e-47 |
| Msa0796460 | Msa1067910 | 0.825116 | 5.587016e-54 | -8.615850e-47 |
| Msa0796460 | Msa1069440 | 0.804652 | 1.949235e-49 | -8.615850e-47 |
| Msa0796460 | Msa1070830 | 0.822851 | 1.898547e-53 | -8.615850e-47 |
| Msa0796460 | Msa1071310 | 0.848493 | 5.917440e-60 | -8.615850e-47 |
| Msa0796460 | Msa1071460 | 0.807406 | 5.134825e-50 | -8.615850e-47 |
| Msa0796460 | Msa1072770 | 0.800518 | 1.388269e-48 | -8.615850e-47 |
| Msa0796460 | Msa1076640 | 0.807596 | 4.678314e-50 | -8.615850e-47 |
| Msa0796460 | Msa1079610 | 0.853220 | 2.760189e-61 | -8.615850e-47 |
| Msa0796460 | Msa1080790 | 0.826190 | 3.107885e-54 | -8.615850e-47 |
| Msa0796460 | Msa1081530 | 0.821724 | 3.468146e-53 | -8.615850e-47 |
| Msa0796460 | Msa1102180 | 0.850117 | 2.088475e-60 | -8.615850e-47 |
| Msa0796460 | Msa1108530 | 0.855510 | 6.012711e-62 | -8.615850e-47 |
| Msa0796460 | Msa1108780 | 0.842355 | 2.720179e-58 | -8.615850e-47 |
| Msa0796460 | Msa1113210 | 0.839620 | 1.421352e-57 | -8.615850e-47 |
| Msa0796460 | Msa1113280 | 0.800210 | 1.603902e-48 | -8.615850e-47 |
| Msa0796460 | Msa1117830 | 0.802952 | 4.395341e-49 | -8.615850e-47 |
| Msa0796460 | Msa1118930 | 0.823414 | 1.403481e-53 | -8.615850e-47 |
| Msa0796460 | Msa1122480 | 0.824032 | 1.005491e-53 | -8.615850e-47 |
| Msa0796460 | Msa1123340 | 0.825672 | 4.126010e-54 | -8.615850e-47 |
| Msa0796460 | Msa1124440 | 0.835259 | 1.861789e-56 | -8.615850e-47 |
| Msa0796460 | Msa1129660 | 0.822591 | 2.182476e-53 | -8.615850e-47 |
| Msa0796460 | Msa1152280 | 0.869110 | 3.957776e-66 | -8.615850e-47 |
| Msa0796460 | Msa1158160 | 0.808667 | 2.767913e-50 | -8.615850e-47 |
| Msa0796460 | Msa1161120 | 0.803561 | 3.287726e-49 | -8.615850e-47 |
| Msa0796460 | Msa1161520 | 0.817618 | 3.004054e-52 | -8.615850e-47 |
| Msa0796460 | Msa1168130 | 0.820538 | 6.507687e-53 | -8.615850e-47 |
| Msa0796460 | Msa1182400 | 0.817196 | 3.737821e-52 | -8.615850e-47 |
| Msa0796460 | Msa1186010 | 0.840627 | 7.758383e-58 | -8.615850e-47 |
| Msa0796460 | Msa1186580 | 0.844525 | 7.162632e-59 | -8.615850e-47 |
| Msa0796460 | Msa1188820 | 0.807580 | 4.716691e-50 | -8.615850e-47 |
| Msa0796460 | Msa1191390 | 0.812558 | 3.991380e-51 | -8.615850e-47 |
| Msa0796460 | Msa1194170 | -0.840364 | 9.091552e-58 | -8.615850e-47 |
| Msa0796460 | Msa1204110 | 0.824854 | 6.439889e-54 | -8.615850e-47 |
| Msa0796460 | Msa1208250 | 0.827236 | 1.748483e-54 | -8.615850e-47 |
| Msa0796460 | Msa1208810 | 0.834946 | 2.233630e-56 | -8.615850e-47 |
| Msa0796460 | Msa1211260 | 0.814027 | 1.899037e-51 | -8.615850e-47 |
| Msa0796460 | Msa1211280 | 0.804526 | 2.071086e-49 | -8.615850e-47 |
| Msa0796460 | Msa1211300 | 0.831121 | 1.997575e-55 | -8.615850e-47 |
| Msa0796460 | Msa1211370 | 0.830467 | 2.889698e-55 | -8.615850e-47 |
| Msa0796460 | Msa1211390 | 0.852346 | 4.902523e-61 | -8.615850e-47 |
| Msa0796460 | Msa1212740 | 0.806477 | 8.072124e-50 | -8.615850e-47 |
| Msa0796460 | Msa1216700 | 0.811597 | 6.466498e-51 | -8.615850e-47 |
| Msa0796460 | Msa1216900 | 0.802877 | 4.554617e-49 | -8.615850e-47 |
| Msa0796460 | Msa1223510 | 0.837596 | 4.736173e-57 | -8.615850e-47 |
| Msa0796460 | Msa1230190 | 0.817606 | 3.022114e-52 | -8.615850e-47 |
| Msa0796460 | Msa1231520 | 0.807716 | 4.412731e-50 | -8.615850e-47 |
| Msa0796460 | Msa1233760 | 0.807671 | 4.510847e-50 | -8.615850e-47 |
| Msa0796460 | Msa1235760 | 0.801850 | 7.410149e-49 | -8.615850e-47 |
| Msa0796460 | Msa1237260 | 0.832859 | 7.430653e-56 | -8.615850e-47 |
| Msa0796460 | Msa1238370 | 0.832984 | 6.919589e-56 | -8.615850e-47 |
| Msa0796460 | Msa1240820 | 0.850759 | 1.379525e-60 | -8.615850e-47 |
| Msa0796460 | Msa1242990 | 0.821101 | 4.829006e-53 | -8.615850e-47 |
| Msa0796460 | Msa1245300 | 0.801977 | 6.980160e-49 | -8.615850e-47 |
| Msa0796460 | Msa1246420 | 0.828137 | 1.062540e-54 | -8.615850e-47 |
| Msa0796460 | Msa1248400 | 0.803045 | 4.203515e-49 | -8.615850e-47 |
| Msa0796460 | Msa1259010 | 0.832585 | 8.692603e-56 | -8.615850e-47 |
| Msa0796460 | Msa1263610 | 0.821701 | 3.511166e-53 | -8.615850e-47 |
| Msa0796460 | Msa1264140 | 0.808252 | 3.393051e-50 | -8.615850e-47 |
| Msa0796460 | Msa1274310 | 0.810093 | 1.368097e-50 | -8.615850e-47 |
| Msa0796460 | Msa1276070 | 0.816372 | 5.721718e-52 | -8.615850e-47 |
| Msa0796460 | Msa1282210 | 0.840802 | 6.983766e-58 | -8.615850e-47 |
| Msa0796460 | Msa1284390 | 0.835289 | 1.830052e-56 | -8.615850e-47 |
| Msa0796460 | Msa1287160 | 0.839159 | 1.871976e-57 | -8.615850e-47 |
| Msa0796460 | Msa1287340 | 0.836209 | 1.069886e-56 | -8.615850e-47 |
| Msa0796460 | Msa1306700 | 0.832616 | 8.537681e-56 | -8.615850e-47 |
| Msa0796460 | Msa1320530 | -0.806826 | 6.812634e-50 | -8.615850e-47 |
| Msa0796460 | Msa1322420 | 0.802830 | 4.655910e-49 | -8.615850e-47 |
| Msa0796460 | Msa1323920 | 0.832776 | 7.793763e-56 | -8.615850e-47 |
| Msa0796460 | Msa1327820 | 0.812402 | 4.316458e-51 | -8.615850e-47 |
| Msa0796460 | Msa1329820 | 0.805096 | 1.574139e-49 | -8.615850e-47 |
| Msa0796460 | Msa1330660 | 0.808875 | 2.498099e-50 | -8.615850e-47 |
| Msa0796460 | Msa1335720 | 0.809753 | 1.619296e-50 | -8.615850e-47 |
| Msa0796460 | Msa1336350 | 0.804066 | 2.582332e-49 | -8.615850e-47 |
| Msa0796460 | Msa1342400 | 0.856811 | 2.499622e-62 | -8.615850e-47 |
| Msa0796460 | Msa1353280 | 0.949389 | 1.405893e-107 | -8.615850e-47 |
| Msa0796460 | Msa1357380 | 0.830242 | 3.279185e-55 | -8.615850e-47 |
| Msa0796460 | Msa1357720 | 0.840557 | 8.094063e-58 | -8.615850e-47 |
| Msa0796460 | Msa1360380 | 0.811430 | 7.027813e-51 | -8.615850e-47 |
| Msa0796460 | Msa1364520 | 0.812626 | 3.856273e-51 | -8.615850e-47 |
| Msa0796460 | Msa1366700 | 0.808232 | 3.427486e-50 | -8.615850e-47 |
| Msa0796460 | Msa1368660 | 0.842567 | 2.389322e-58 | -8.615850e-47 |
| Msa0796460 | Msa1370630 | 0.840246 | 9.759024e-58 | -8.615850e-47 |
| Msa0796460 | Msa1370910 | -0.838581 | 2.642106e-57 | -8.615850e-47 |
| Msa0796460 | Msa1381720 | 0.815711 | 8.038542e-52 | -8.615850e-47 |
| Msa0796460 | Msa1384980 | 0.805728 | 1.160625e-49 | -8.615850e-47 |
| Msa0796460 | Msa1385940 | 0.823550 | 1.304362e-53 | -8.615850e-47 |
| Msa0796460 | Msa1386520 | 0.801767 | 7.708739e-49 | -8.615850e-47 |
| Msa0796460 | Msa1387090 | 0.824775 | 6.721884e-54 | -8.615850e-47 |
| Msa0796460 | Msa1388520 | 0.813776 | 2.157137e-51 | -8.615850e-47 |
| Msa0796460 | Msa1393600 | 0.805043 | 1.614986e-49 | -8.615850e-47 |
| Msa0796460 | Msa1395580 | 0.809581 | 1.763146e-50 | -8.615850e-47 |
| Msa0796460 | Msa1395640 | 0.816662 | 4.926204e-52 | -8.615850e-47 |
| Msa0796460 | Msa1396090 | 0.802513 | 5.412953e-49 | -8.615850e-47 |
| Msa0796460 | Msa1397540 | 0.804393 | 2.207762e-49 | -8.615850e-47 |
| Msa0796460 | Msa1401000 | 0.830259 | 3.247389e-55 | -8.615850e-47 |
| Msa0796460 | Msa1405190 | 0.818212 | 2.205359e-52 | -8.615850e-47 |
| Msa0796460 | Msa1405470 | 0.804063 | 2.586173e-49 | -8.615850e-47 |
| Msa0796460 | Msa1413220 | 0.836066 | 1.163327e-56 | -8.615850e-47 |
| Msa0796460 | Msa1413880 | 0.813779 | 2.153807e-51 | -8.615850e-47 |
| Msa0796460 | Msa1413900 | 0.830099 | 3.553158e-55 | -8.615850e-47 |
| Msa0796460 | Msa1415120 | 0.815262 | 1.011489e-51 | -8.615850e-47 |
| Msa0796460 | Msa1415270 | 0.833544 | 5.017483e-56 | -8.615850e-47 |
| Msa0796460 | Msa1415560 | 0.808242 | 3.409869e-50 | -8.615850e-47 |
| Msa0796460 | Msa1419230 | 0.840362 | 9.101895e-58 | -8.615850e-47 |
| Msa0796460 | Msa1427180 | 0.801195 | 1.009511e-48 | -8.615850e-47 |
| Msa0796460 | Msa1428440 | 0.855398 | 6.481076e-62 | -8.615850e-47 |
| Msa0796460 | Msa1428560 | 0.828722 | 7.678372e-55 | -8.615850e-47 |
| Msa0796460 | Msa1431180 | 0.824412 | 8.187673e-54 | -8.615850e-47 |
| Msa0796460 | Msa1432250 | 0.817674 | 2.917257e-52 | -8.615850e-47 |
| Msa0796460 | Msa1433380 | 0.848549 | 5.712031e-60 | -8.615850e-47 |
| Msa0796460 | Msa1440180 | 0.815054 | 1.125270e-51 | -8.615850e-47 |
| Msa0796460 | Msa1445700 | 0.812262 | 4.631158e-51 | -8.615850e-47 |
| Msa0796460 | Msa1446220 | 0.809258 | 2.068308e-50 | -8.615850e-47 |
| Msa0796460 | Msa1449740 | 0.812917 | 3.330225e-51 | -8.615850e-47 |
| Msa0796460 | Msa1450850 | 0.813515 | 2.461217e-51 | -8.615850e-47 |
| Msa0796460 | Msa1452200 | 0.826313 | 2.904617e-54 | -8.615850e-47 |
| Msa0796460 | Msa1452940 | 0.817608 | 3.019152e-52 | -8.615850e-47 |
| Msa0796460 | Msa1457450 | 0.811646 | 6.307730e-51 | -8.615850e-47 |
| Msa0796460 | Msa1459630 | 0.818804 | 1.618992e-52 | -8.615850e-47 |
| Msa0133670 | Msa0796460 | 0.829752 | 4.318272e-55 | -8.615850e-47 |
| Msa0133880 | Msa0796460 | 0.834740 | 2.517070e-56 | -8.615850e-47 |
| Msa0139740 | Msa0796460 | 0.824894 | 6.301894e-54 | -8.615850e-47 |
| Msa0160650 | Msa0796460 | 0.831709 | 1.431309e-55 | -8.615850e-47 |
| Msa0165470 | Msa0796460 | 0.810446 | 1.148045e-50 | -8.615850e-47 |
| Msa0169960 | Msa0796460 | 0.802065 | 6.695560e-49 | -8.615850e-47 |
| Msa0181290 | Msa0796460 | 0.827128 | 1.856508e-54 | -8.615850e-47 |
| Msa0184030 | Msa0796460 | 0.823512 | 1.330728e-53 | -8.615850e-47 |
| Msa0184120 | Msa0796460 | 0.831640 | 1.488843e-55 | -8.615850e-47 |
| Msa0188500 | Msa0796460 | 0.857468 | 1.599121e-62 | -8.615850e-47 |
| Msa0200840 | Msa0796460 | 0.825693 | 4.079578e-54 | -8.615850e-47 |
| Msa0200870 | Msa0796460 | 0.839002 | 2.055382e-57 | -8.615850e-47 |
| Msa0203180 | Msa0796460 | 0.825041 | 5.819869e-54 | -8.615850e-47 |
| Msa0218480 | Msa0796460 | 0.804701 | 1.904033e-49 | -8.615850e-47 |
| Msa0218590 | Msa0796460 | 0.807958 | 3.919906e-50 | -8.615850e-47 |
| Msa0221860 | Msa0796460 | 0.818410 | 1.989137e-52 | -8.615850e-47 |
| Msa0221940 | Msa0796460 | 0.812808 | 3.517988e-51 | -8.615850e-47 |
| Msa0225880 | Msa0796460 | 0.813617 | 2.337268e-51 | -8.615850e-47 |
| Msa0230980 | Msa0796460 | 0.832202 | 1.081405e-55 | -8.615850e-47 |
| Msa0368370 | Msa0796460 | 0.800152 | 1.648021e-48 | -8.615850e-47 |
| Msa0368380 | Msa0796460 | 0.801401 | 9.161279e-49 | -8.615850e-47 |
| Msa0369750 | Msa0796460 | 0.814896 | 1.219717e-51 | -8.615850e-47 |
| Msa0372990 | Msa0796460 | 0.809421 | 1.908301e-50 | -8.615850e-47 |
| Msa0378670 | Msa0796460 | 0.823138 | 1.627332e-53 | -8.615850e-47 |
| Msa0378700 | Msa0796460 | 0.827139 | 1.845018e-54 | -8.615850e-47 |
| Msa0379500 | Msa0796460 | 0.811300 | 7.499930e-51 | -8.615850e-47 |
| Msa0379720 | Msa0796460 | 0.807441 | 5.046108e-50 | -8.615850e-47 |
| Msa0389050 | Msa0796460 | 0.804759 | 1.851149e-49 | -8.615850e-47 |
| Msa0403720 | Msa0796460 | 0.817359 | 3.435181e-52 | -8.615850e-47 |
| Msa0404180 | Msa0796460 | 0.813101 | 3.035406e-51 | -8.615850e-47 |
| Msa0411000 | Msa0796460 | 0.856303 | 3.524960e-62 | -8.615850e-47 |
| Msa0417150 | Msa0796460 | 0.802855 | 4.601256e-49 | -8.615850e-47 |
| Msa0419620 | Msa0796460 | -0.808825 | 2.560058e-50 | -8.615850e-47 |
| Msa0421390 | Msa0796460 | 0.826382 | 2.797627e-54 | -8.615850e-47 |
| Msa0427050 | Msa0796460 | 0.849646 | 2.828891e-60 | -8.615850e-47 |
| Msa0429100 | Msa0796460 | 0.816162 | 6.375744e-52 | -8.615850e-47 |
| Msa0429130 | Msa0796460 | 0.821872 | 3.204384e-53 | -8.615850e-47 |
| Msa0431940 | Msa0796460 | 0.847617 | 1.032406e-59 | -8.615850e-47 |
| Msa0448400 | Msa0796460 | 0.862959 | 3.502441e-64 | -8.615850e-47 |
| Msa0449900 | Msa0796460 | 0.800710 | 1.268167e-48 | -8.615850e-47 |
| Msa0454940 | Msa0796460 | 0.834853 | 2.356819e-56 | -8.615850e-47 |
| Msa0455230 | Msa0796460 | 0.829881 | 4.015231e-55 | -8.615850e-47 |
| Msa0456480 | Msa0796460 | 0.837127 | 6.243675e-57 | -8.615850e-47 |
| Msa0463960 | Msa0796460 | 0.802314 | 5.950852e-49 | -8.615850e-47 |
| Msa0473450 | Msa0796460 | 0.829667 | 4.528898e-55 | -8.615850e-47 |
| Msa0475360 | Msa0796460 | 0.813041 | 3.128467e-51 | -8.615850e-47 |
| Msa0243470 | Msa0796460 | 0.841821 | 3.764965e-58 | -8.615850e-47 |
| Msa0243820 | Msa0796460 | 0.833744 | 4.472107e-56 | -8.615850e-47 |
| Msa0246300 | Msa0796460 | 0.818478 | 1.919582e-52 | -8.615850e-47 |
| Msa0256170 | Msa0796460 | 0.805271 | 1.446915e-49 | -8.615850e-47 |
| Msa0260470 | Msa0796460 | 0.818920 | 1.523402e-52 | -8.615850e-47 |
| Msa0264240 | Msa0796460 | 0.803172 | 3.957236e-49 | -8.615850e-47 |
| Msa0264420 | Msa0796460 | 0.813980 | 1.944488e-51 | -8.615850e-47 |
| Msa0268460 | Msa0796460 | 0.801765 | 7.717220e-49 | -8.615850e-47 |
| Msa0269100 | Msa0796460 | 0.804876 | 1.749808e-49 | -8.615850e-47 |
| Msa0270460 | Msa0796460 | 0.822255 | 2.611669e-53 | -8.615850e-47 |
| Msa0281780 | Msa0796460 | 0.801274 | 9.727089e-49 | -8.615850e-47 |
| Msa0281940 | Msa0796460 | 0.808703 | 2.718440e-50 | -8.615850e-47 |
| Msa0282500 | Msa0796460 | 0.840010 | 1.124689e-57 | -8.615850e-47 |
| Msa0284870 | Msa0796460 | 0.814482 | 1.506701e-51 | -8.615850e-47 |
| Msa0286860 | Msa0796460 | 0.815867 | 7.419286e-52 | -8.615850e-47 |
| Msa0286880 | Msa0796460 | 0.816934 | 4.280323e-52 | -8.615850e-47 |
| Msa0302090 | Msa0796460 | 0.809863 | 1.533457e-50 | -8.615850e-47 |
| Msa0303200 | Msa0796460 | 0.803980 | 2.690408e-49 | -8.615850e-47 |
| Msa0304110 | Msa0796460 | 0.812829 | 3.481662e-51 | -8.615850e-47 |
| Msa0311330 | Msa0796460 | 0.815572 | 8.632800e-52 | -8.615850e-47 |
| Msa0323630 | Msa0796460 | 0.816305 | 5.922951e-52 | -8.615850e-47 |
| Msa0325510 | Msa0796460 | 0.820751 | 5.813949e-53 | -8.615850e-47 |
| Msa0330270 | Msa0796460 | 0.808403 | 3.151268e-50 | -8.615850e-47 |
| Msa0336270 | Msa0796460 | 0.805272 | 1.446476e-49 | -8.615850e-47 |
| Msa0339560 | Msa0796460 | 0.829622 | 4.643500e-55 | -8.615850e-47 |
| Msa0339670 | Msa0796460 | 0.805868 | 1.084398e-49 | -8.615850e-47 |
| Msa0341190 | Msa0796460 | 0.818088 | 2.352564e-52 | -8.615850e-47 |
| Msa0343200 | Msa0796460 | 0.803162 | 3.976272e-49 | -8.615850e-47 |
| Msa0352640 | Msa0796460 | 0.841118 | 5.768913e-58 | -8.615850e-47 |
| Msa0362430 | Msa0796460 | 0.832327 | 1.007233e-55 | -8.615850e-47 |
| Msa0363460 | Msa0796460 | 0.831574 | 1.545504e-55 | -8.615850e-47 |
| Msa0364010 | Msa0796460 | 0.818656 | 1.748825e-52 | -8.615850e-47 |
| Msa0496460 | Msa0796460 | 0.878041 | 3.870552e-69 | -8.615850e-47 |
| Msa0496470 | Msa0796460 | 0.855229 | 7.255675e-62 | -8.615850e-47 |
| Msa0496570 | Msa0796460 | 0.849995 | 2.259999e-60 | -8.615850e-47 |
| Msa0502910 | Msa0796460 | 0.825620 | 4.244405e-54 | -8.615850e-47 |
| Msa0509510 | Msa0796460 | 0.815012 | 1.149867e-51 | -8.615850e-47 |
| Msa0516310 | Msa0796460 | 0.814806 | 1.277285e-51 | -8.615850e-47 |
| Msa0516480 | Msa0796460 | 0.806373 | 8.489546e-50 | -8.615850e-47 |
| Msa0520810 | Msa0796460 | 0.838754 | 2.382569e-57 | -8.615850e-47 |
| Msa0534380 | Msa0796460 | 0.827639 | 1.399925e-54 | -8.615850e-47 |
| Msa0546370 | Msa0796460 | 0.870573 | 1.317289e-66 | -8.615850e-47 |
| Msa0549330 | Msa0796460 | 0.806744 | 7.090759e-50 | -8.615850e-47 |
| Msa0549740 | Msa0796460 | 0.803079 | 4.136875e-49 | -8.615850e-47 |
| Msa0551520 | Msa0796460 | 0.807731 | 4.379399e-50 | -8.615850e-47 |
| Msa0553520 | Msa0796460 | 0.801581 | 8.418225e-49 | -8.615850e-47 |
| Msa0554440 | Msa0796460 | 0.845569 | 3.741541e-59 | -8.615850e-47 |
| Msa0555510 | Msa0796460 | 0.801422 | 9.071919e-49 | -8.615850e-47 |
| Msa0558890 | Msa0796460 | 0.834846 | 2.367286e-56 | -8.615850e-47 |
| Msa0560370 | Msa0796460 | 0.802616 | 5.155908e-49 | -8.615850e-47 |
| Msa0563140 | Msa0796460 | 0.810493 | 1.121587e-50 | -8.615850e-47 |
| Msa0568490 | Msa0796460 | 0.846415 | 2.203510e-59 | -8.615850e-47 |
| Msa0585930 | Msa0796460 | 0.819264 | 1.272286e-52 | -8.615850e-47 |
| Msa0601920 | Msa0796460 | -0.810592 | 1.067896e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796460 | MtrunA17_Chr5g0399391 | 96.915 | 389 | 11 | 1 | 1 | 389 | 1 | 388 | 0.0 | 787 |
| Msa0796460 | MtrunA17_Chr3g0140081 | 35.492 | 386 | 168 | 11 | 55 | 379 | 1 | 366 | 1.59e-45 | 160 |
| Msa0796460 | MtrunA17_Chr4g0019631 | 37.884 | 293 | 153 | 9 | 66 | 346 | 18 | 293 | 1.21e-34 | 130 |
| Msa0796460 | MtrunA17_Chr7g0260211 | 36.545 | 301 | 151 | 6 | 113 | 382 | 175 | 466 | 6.83e-34 | 131 |
| Msa0796460 | MtrunA17_Chr1g0166381 | 38.793 | 232 | 121 | 3 | 169 | 379 | 226 | 457 | 5.98e-32 | 126 |
| Msa0796460 | MtrunA17_Chr1g0185201 | 39.407 | 236 | 121 | 5 | 169 | 382 | 241 | 476 | 1.08e-29 | 120 |
| Msa0796460 | MtrunA17_Chr1g0204831 | 40.969 | 227 | 113 | 4 | 172 | 379 | 220 | 444 | 2.43e-29 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796460 | AT4G17350.1 | 56.373 | 408 | 155 | 11 | 7 | 398 | 2 | 402 | 2.77e-133 | 388 |
| Msa0796460 | AT5G47440.1 | 54.987 | 371 | 150 | 7 | 42 | 399 | 37 | 403 | 1.65e-118 | 350 |
| Msa0796460 | AT4G16670.1 | 51.491 | 369 | 157 | 9 | 53 | 401 | 63 | 429 | 1.75e-100 | 305 |
| Msa0796460 | AT4G16670.2 | 53.979 | 289 | 113 | 7 | 53 | 322 | 63 | 350 | 8.00e-79 | 247 |
| Msa0796460 | AT4G16670.3 | 49.371 | 318 | 112 | 8 | 53 | 322 | 63 | 379 | 1.87e-73 | 234 |
| Msa0796460 | AT3G22810.3 | 41.026 | 312 | 143 | 7 | 99 | 379 | 21 | 322 | 3.44e-56 | 188 |
| Msa0796460 | AT3G22810.1 | 41.026 | 312 | 143 | 7 | 99 | 379 | 159 | 460 | 4.39e-55 | 189 |
| Msa0796460 | AT4G14740.3 | 39.172 | 314 | 146 | 8 | 99 | 379 | 25 | 326 | 6.39e-49 | 169 |
| Msa0796460 | AT4G14740.1 | 39.172 | 314 | 146 | 8 | 99 | 379 | 164 | 465 | 9.99e-48 | 169 |
| Msa0796460 | AT4G14740.2 | 39.172 | 314 | 146 | 8 | 99 | 379 | 164 | 465 | 9.99e-48 | 169 |
| Msa0796460 | AT5G43870.1 | 39.661 | 295 | 150 | 6 | 104 | 379 | 158 | 443 | 2.54e-39 | 146 |
| Msa0796460 | AT4G32780.1 | 34.133 | 375 | 189 | 10 | 48 | 379 | 35 | 394 | 4.13e-39 | 145 |
| Msa0796460 | AT4G32780.2 | 34.133 | 375 | 189 | 10 | 48 | 379 | 54 | 413 | 4.99e-39 | 145 |
| Msa0796460 | AT3G22810.2 | 39.179 | 268 | 117 | 6 | 99 | 337 | 159 | 409 | 1.08e-38 | 144 |
| Msa0796460 | AT4G14740.4 | 39.216 | 255 | 112 | 6 | 99 | 322 | 164 | 406 | 2.30e-34 | 132 |
| Msa0796460 | AT3G63300.2 | 37.500 | 320 | 149 | 7 | 105 | 391 | 31 | 332 | 8.23e-29 | 115 |
| Msa0796460 | AT3G63300.1 | 37.662 | 308 | 143 | 6 | 105 | 379 | 189 | 480 | 8.98e-29 | 117 |
| Msa0796460 | AT5G43870.2 | 39.407 | 236 | 117 | 4 | 104 | 322 | 158 | 384 | 1.24e-24 | 104 |
Find 93 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTGAAGATCTCTATTT+TGG | 0.173414 | 5_3:-8496729 | Msa0796460:CDS |
| ATTATTGTAGGTGTGGTTTA+TGG | 0.231356 | 5_3:-8496798 | Msa0796460:intron |
| GTTGGTGGCTCAGGAATTTC+TGG | 0.231758 | 5_3:+8499023 | None:intergenic |
| TTGTTGCAGGTTACGGAAAA+AGG | 0.263078 | 5_3:-8497239 | Msa0796460:intron |
| GAACCCATACCCACTTATTC+AGG | 0.282884 | 5_3:-8499475 | Msa0796460:five_prime_UTR |
| CCCATTCGACAATTAGTAAA+TGG | 0.310053 | 5_3:+8498008 | None:intergenic |
| GTAAATGGTATGAGCTTTCC+AGG | 0.322981 | 5_3:+8498023 | None:intergenic |
| AGTAAAGAAAGAATATTATA+AGG | 0.331718 | 5_3:+8499388 | None:intergenic |
| TAGTGACAATCACTCTAAAT+TGG | 0.333729 | 5_3:-8497829 | Msa0796460:CDS |
| GTAGCAGTTCTTGATTTGTT+TGG | 0.333807 | 5_3:-8496563 | Msa0796460:exon |
| CTATTAAGTATTAACAAATA+TGG | 0.346497 | 5_3:+8496397 | None:intergenic |
| AATTGTCGAATGGGTACTAT+TGG | 0.349296 | 5_3:-8497999 | Msa0796460:CDS |
| GAATGGGTACTATTGGAAAA+TGG | 0.359539 | 5_3:-8497992 | Msa0796460:CDS |
| ATCAGTTGAGAGTGAGATAT+AGG | 0.373042 | 5_3:+8499320 | None:intergenic |
| GATTTCTGCGCCTCAATTAA+CGG | 0.383648 | 5_3:-8498874 | Msa0796460:intron |
| GGGAGATTTGTTGCAGGTTA+CGG | 0.396348 | 5_3:-8497246 | Msa0796460:CDS |
| AGCATCTTATTGTGTTGAAA+TGG | 0.401646 | 5_3:-8497775 | Msa0796460:CDS |
| TGGACTACAGGAACTGCTTA+TGG | 0.404340 | 5_3:-8496420 | Msa0796460:three_prime_UTR |
| CTCACTGCTGCCGCTGCAAC+AGG | 0.409391 | 5_3:-8497666 | Msa0796460:intron |
| TAATCCTGAATAAGTGGGTA+TGG | 0.411945 | 5_3:+8499471 | None:intergenic |
| ACTGGTCCAAGCACATTGAT+TGG | 0.420396 | 5_3:-8499659 | Msa0796460:five_prime_UTR |
| CCATTTACTAATTGTCGAAT+GGG | 0.421708 | 5_3:-8498008 | Msa0796460:CDS |
| CTCTAAATTGGATGTTGCTA+TGG | 0.425258 | 5_3:-8497817 | Msa0796460:CDS |
| TCAAGAGGTGTTGGTGGCTC+AGG | 0.432946 | 5_3:+8499014 | None:intergenic |
| CATTCTGCACTGTCAATTGC+CGG | 0.433877 | 5_3:-8497885 | Msa0796460:CDS |
| ATGCGAGGGAGATTTGTTGC+AGG | 0.435484 | 5_3:-8497252 | Msa0796460:CDS |
| TTACATCAACAAGAAATATC+AGG | 0.443700 | 5_3:-8497103 | Msa0796460:intron |
| TGGAGTTCTTGTCTAGATCC+TGG | 0.446623 | 5_3:-8498986 | Msa0796460:CDS |
| CTACTACTACCACCGTACTT+TGG | 0.446789 | 5_3:-8499519 | Msa0796460:five_prime_UTR |
| ATGTTTCAACATTGGAGAAA+AGG | 0.448724 | 5_3:-8499122 | Msa0796460:CDS |
| TCCAAGCACATTGATTGGAT+TGG | 0.453538 | 5_3:-8499654 | Msa0796460:five_prime_UTR |
| TAAGACTCATGAAACATTAC+CGG | 0.454911 | 5_3:-8498901 | Msa0796460:CDS |
| AACATTGGAGAAAAGGATCA+TGG | 0.456120 | 5_3:-8499115 | Msa0796460:CDS |
| AAAACATAATCCTGAATAAG+TGG | 0.459503 | 5_3:+8499465 | None:intergenic |
| ACCAACACCTCTTGAGCCTA+TGG | 0.465547 | 5_3:-8499006 | Msa0796460:CDS |
| TTCTCTTCATCAAAATTACA+AGG | 0.467306 | 5_3:-8499290 | Msa0796460:intron |
| ACCATTTACTAATTGTCGAA+TGG | 0.480098 | 5_3:-8498009 | Msa0796460:CDS |
| GCCAATCCAATCAATGTGCT+TGG | 0.482126 | 5_3:+8499653 | None:intergenic |
| TGAGGCGCAGAAATCACTTC+CGG | 0.494790 | 5_3:+8498882 | None:intergenic |
| AATCTCCCTCGCATGGAGAA+TGG | 0.495676 | 5_3:+8497261 | None:intergenic |
| AGCCTCCGCGTTGGCTTCTG+TGG | 0.496691 | 5_3:-8497859 | Msa0796460:CDS |
| TCAATAAGTCCCTACGATAG+AGG | 0.499479 | 5_3:-8497341 | Msa0796460:CDS |
| ATAGTGTTACCACAGTATCA+TGG | 0.500136 | 5_3:-8496378 | None:intergenic |
| ATAGGCTCAAGAGGTGTTGG+TGG | 0.501332 | 5_3:+8499008 | None:intergenic |
| TTCTGCTATTCCTCTATCGT+AGG | 0.504764 | 5_3:+8497331 | None:intergenic |
| TCCATAGGCTCAAGAGGTGT+TGG | 0.507446 | 5_3:+8499005 | None:intergenic |
| AACATCTGACACTCAGAAGC+AGG | 0.508571 | 5_3:+8497293 | None:intergenic |
| TGTATATGTCTCAATAGAGT+AGG | 0.509091 | 5_3:-8496536 | Msa0796460:three_prime_UTR |
| GAAATAATAATGTGGACTAC+AGG | 0.514469 | 5_3:-8496432 | Msa0796460:three_prime_UTR |
| TGTGAGTGGTTAGTAAATGA+TGG | 0.523669 | 5_3:-8499165 | Msa0796460:exon |
| AAAGTGATATGTTTCAACAT+TGG | 0.525411 | 5_3:-8499130 | Msa0796460:CDS |
| CATGGCCATACAGAAAAGAA+AGG | 0.529161 | 5_3:-8496755 | Msa0796460:CDS |
| TCTGCTATTCCTCTATCGTA+GGG | 0.529302 | 5_3:+8497332 | None:intergenic |
| TTCTGCTTCTGAGATTTCAA+AGG | 0.533258 | 5_3:-8498958 | Msa0796460:CDS |
| GATGGAATAGAATTTCTACT+TGG | 0.537636 | 5_3:-8496639 | Msa0796460:CDS |
| ATCAAAAGCAAGCACATTGG+AGG | 0.543010 | 5_3:-8496989 | Msa0796460:CDS |
| CTCAGAAGCAGAAAGACTCC+AGG | 0.544523 | 5_3:+8498968 | None:intergenic |
| GTTGAAATGGCAGAGTTAGC+AGG | 0.552664 | 5_3:-8497762 | Msa0796460:CDS |
| CACTTGCATCAGAAGCAGCA+TGG | 0.555241 | 5_3:-8497966 | Msa0796460:CDS |
| TGCAACAAATCTCCCTCGCA+TGG | 0.556607 | 5_3:+8497254 | None:intergenic |
| ACTTGCATCAGAAGCAGCAT+GGG | 0.561964 | 5_3:-8497965 | Msa0796460:CDS |
| AAGAAATGAAAACCAAAGTA+CGG | 0.564926 | 5_3:+8499507 | None:intergenic |
| GTATAGCTTACCGTTAATTG+AGG | 0.566149 | 5_3:+8498864 | None:intergenic |
| AAGGATCATGGCAATGGCAA+GGG | 0.568181 | 5_3:-8499103 | Msa0796460:CDS |
| CACTTCTACTGTTAATTCTG+CGG | 0.569536 | 5_3:-8497721 | Msa0796460:CDS |
| GCGGTCGATATTCAAACGCC+AGG | 0.569915 | 5_3:-8497702 | Msa0796460:CDS |
| GTGAGAGTCATTAGATCACC+TGG | 0.573410 | 5_3:+8497684 | None:intergenic |
| AATCCTGAATAAGTGGGTAT+GGG | 0.578321 | 5_3:+8499472 | None:intergenic |
| TGTTTCATGTAAGCTTTGAG+AGG | 0.587129 | 5_3:-8497413 | Msa0796460:intron |
| ATGGCCATACAGAAAAGAAA+GGG | 0.589553 | 5_3:-8496754 | Msa0796460:CDS |
| GATCTAGACAAGAACTCCAT+AGG | 0.595247 | 5_3:+8498990 | None:intergenic |
| AAGAACTCCATAGGCTCAAG+AGG | 0.596767 | 5_3:+8498999 | None:intergenic |
| AAAGGATCATGGCAATGGCA+AGG | 0.597294 | 5_3:-8499104 | Msa0796460:CDS |
| AAACATAATCCTGAATAAGT+GGG | 0.599991 | 5_3:+8499466 | None:intergenic |
| TCATTTCAGGTGCATTACGA+TGG | 0.604353 | 5_3:-8497140 | Msa0796460:intron |
| GGAGAAAAGGATCATGGCAA+TGG | 0.608247 | 5_3:-8499109 | Msa0796460:CDS |
| AAGATCAAAAGCAAGCACAT+TGG | 0.613502 | 5_3:-8496992 | Msa0796460:CDS |
| GAGAACCATTCTCCATGCGA+GGG | 0.616237 | 5_3:-8497266 | Msa0796460:CDS |
| TTTGGCCTCAAAACTGCACA+AGG | 0.625130 | 5_3:-8496711 | Msa0796460:CDS |
| TGAGAACCATTCTCCATGCG+AGG | 0.636940 | 5_3:-8497267 | Msa0796460:CDS |
| AAAGGAAGTACCTGTTGCAG+CGG | 0.637979 | 5_3:+8497656 | None:intergenic |
| TGTGTAACGAAGACTCTGCA+TGG | 0.643429 | 5_3:-8496773 | Msa0796460:CDS |
| TGATGTACAGAATTTGTGAG+TGG | 0.670251 | 5_3:-8499179 | Msa0796460:intron |
| TTGTGTTAAGAAGAATGTGG+TGG | 0.677334 | 5_3:+8499354 | None:intergenic |
| ATCTGACACTCAGAAGCAGG+AGG | 0.692727 | 5_3:+8497296 | None:intergenic |
| AACCACAGAAGCCAACGCGG+AGG | 0.719869 | 5_3:+8497857 | None:intergenic |
| TGTCAAAATCCATGATACTG+TGG | 0.721439 | 5_3:+8496369 | None:intergenic |
| AATTAACAGTAGAAGTGACA+CGG | 0.727195 | 5_3:+8497727 | None:intergenic |
| AAATGAAAACCAAAGTACGG+TGG | 0.727522 | 5_3:+8499510 | None:intergenic |
| AGCAACCACAGAAGCCAACG+CGG | 0.728782 | 5_3:+8497854 | None:intergenic |
| TGCATTACGATGGAAACATG+TGG | 0.750334 | 5_3:-8497130 | Msa0796460:CDS |
| ATAAGATGCTAAGAGCTGTG+TGG | 0.765894 | 5_3:+8497788 | None:intergenic |
| GTGTTGTGTTAAGAAGAATG+TGG | 0.777204 | 5_3:+8499351 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAATTCATAGATTTTT+CGG | + | chr5_3:8499451-8499470 | None:intergenic | 10.0% |
| !! | AAGAAAAAAACAAAGTAATA+TGG | + | chr5_3:8496616-8496635 | None:intergenic | 15.0% |
| !! | AGTAAAGAAAGAATATTATA+AGG | + | chr5_3:8496656-8496675 | None:intergenic | 15.0% |
| !! | TCTAAAAAGAAAAAGTTATA+GGG | + | chr5_3:8496782-8496801 | None:intergenic | 15.0% |
| !! | ATCTAAAAAGAAAAAGTTAT+AGG | + | chr5_3:8496783-8496802 | None:intergenic | 15.0% |
| !! | TATAGAAATAGTTTATACAT+AGG | - | chr5_3:8497787-8497806 | Msa0796460:CDS | 15.0% |
| !!! | AGAAAACAATGTTTTAAAAA+CGG | + | chr5_3:8498550-8498569 | None:intergenic | 15.0% |
| !!! | TTGTATTTATCTTAATTTTC+AGG | - | chr5_3:8499018-8499037 | Msa0796460:CDS | 15.0% |
| !!! | TGATTTTTACAATTACATAA+TGG | + | chr5_3:8499176-8499195 | None:intergenic | 15.0% |
| !! | ACAAAAATGAAATAATAATG+TGG | - | chr5_3:8499601-8499620 | Msa0796460:five_prime_UTR | 15.0% |
| !! | CTATTAAGTATTAACAAATA+TGG | + | chr5_3:8499647-8499666 | None:intergenic | 15.0% |
| !! | ATCAAAGTTTATAAATCAGA+TGG | - | chr5_3:8496801-8496820 | Msa0796460:intron | 20.0% |
| !! | TCAAATAATTCAATCCAAAT+AGG | + | chr5_3:8497251-8497270 | None:intergenic | 20.0% |
| !! | ATTAAGTTATTTATCCAAAC+AGG | - | chr5_3:8497835-8497854 | Msa0796460:CDS | 20.0% |
| !! | TTAAGTTATTTATCCAAACA+GGG | - | chr5_3:8497836-8497855 | Msa0796460:CDS | 20.0% |
| !!! | TAGTCTTTTGCTTATTTTTT+AGG | + | chr5_3:8497893-8497912 | None:intergenic | 20.0% |
| !! | ACATTGATAGAAAAAGATAA+AGG | + | chr5_3:8498406-8498425 | None:intergenic | 20.0% |
| !!! | CCTCTTAAATTTTTGTTTTT+AGG | + | chr5_3:8498978-8498997 | None:intergenic | 20.0% |
| !! | CCTAAAAACAAAAATTTAAG+AGG | - | chr5_3:8498975-8498994 | Msa0796460:CDS | 20.0% |
| !!! | AAAATTTAAGAGGTGAATTT+TGG | - | chr5_3:8498985-8499004 | Msa0796460:CDS | 20.0% |
| !!! | TTTTGTGATTACATTTTGTA+TGG | + | chr5_3:8499587-8499606 | None:intergenic | 20.0% |
| ! | AAGAAATGAAAACCAAAGTA+CGG | + | chr5_3:8496537-8496556 | None:intergenic | 25.0% |
| ! | AAACATAATCCTGAATAAGT+GGG | + | chr5_3:8496578-8496597 | None:intergenic | 25.0% |
| ! | AAAACATAATCCTGAATAAG+TGG | + | chr5_3:8496579-8496598 | None:intergenic | 25.0% |
| !!! | TTGTAATTTTGATGAAGAGA+AGG | + | chr5_3:8496752-8496771 | None:intergenic | 25.0% |
| ! | TTCTCTTCATCAAAATTACA+AGG | - | chr5_3:8496751-8496770 | Msa0796460:CDS | 25.0% |
| ! | AAAGTGATATGTTTCAACAT+TGG | - | chr5_3:8496911-8496930 | Msa0796460:intron | 25.0% |
| ! | GATTCAATGAATAGTTAACA+AGG | + | chr5_3:8497202-8497221 | None:intergenic | 25.0% |
| !! | AGTATTTTCATAAGCTATTC+TGG | - | chr5_3:8497480-8497499 | Msa0796460:intron | 25.0% |
| ! | AAGCATTTGTGAGATTATTT+AGG | + | chr5_3:8497557-8497576 | None:intergenic | 25.0% |
| ! | ATAAAGAGTAACAACATGTT+TGG | - | chr5_3:8497940-8497959 | Msa0796460:CDS | 25.0% |
| ! | GTAAGTTGTAAGATTTGATA+TGG | - | chr5_3:8498576-8498595 | Msa0796460:intron | 25.0% |
| ! | TTGATATGGAACAATATTGA+TGG | - | chr5_3:8498590-8498609 | Msa0796460:intron | 25.0% |
| !! | TAGTTGATGTATTTCATTTC+AGG | - | chr5_3:8498888-8498907 | Msa0796460:CDS | 25.0% |
| ! | TTACATCAACAAGAAATATC+AGG | - | chr5_3:8498938-8498957 | Msa0796460:CDS | 25.0% |
| !! | ATGCTTACATTTATGCTTTT+TGG | + | chr5_3:8499086-8499105 | None:intergenic | 25.0% |
| ! | TTTCTCCAGAAATTTCTTTA+TGG | - | chr5_3:8499197-8499216 | Msa0796460:intron | 25.0% |
| ! | AAGAACCATAAAGAAATTTC+TGG | + | chr5_3:8499205-8499224 | None:intergenic | 25.0% |
| AACCAACGTTGTAACAAAAA+AGG | - | chr5_3:8496489-8496508 | Msa0796460:three_prime_UTR | 30.0% | |
| !!! | AACCTTTTTTGTTACAACGT+TGG | + | chr5_3:8496494-8496513 | None:intergenic | 30.0% |
| ATGTTTCAACATTGGAGAAA+AGG | - | chr5_3:8496919-8496938 | Msa0796460:intron | 30.0% | |
| TAAGACTCATGAAACATTAC+CGG | - | chr5_3:8497140-8497159 | Msa0796460:intron | 30.0% | |
| !! | TGTTGACTAGCAATACATTT+TGG | - | chr5_3:8497224-8497243 | Msa0796460:intron | 30.0% |
| ! | GTTGACTAGCAATACATTTT+GGG | - | chr5_3:8497225-8497244 | Msa0796460:intron | 30.0% |
| TTGAGTTTATCTACTAGCAT+AGG | - | chr5_3:8497267-8497286 | Msa0796460:CDS | 30.0% | |
| ! | CACAAATGCTTAATGCATTT+TGG | - | chr5_3:8497566-8497585 | Msa0796460:intron | 30.0% |
| ATAAAGTTGAAACCCTGATA+TGG | - | chr5_3:8497913-8497932 | Msa0796460:CDS | 30.0% | |
| ! | CTCTTTATTTGTCCATATCA+GGG | + | chr5_3:8497928-8497947 | None:intergenic | 30.0% |
| ! | ACTCTTTATTTGTCCATATC+AGG | + | chr5_3:8497929-8497948 | None:intergenic | 30.0% |
| ACCATTTACTAATTGTCGAA+TGG | - | chr5_3:8498032-8498051 | Msa0796460:intron | 30.0% | |
| CCATTTACTAATTGTCGAAT+GGG | - | chr5_3:8498033-8498052 | Msa0796460:intron | 30.0% | |
| TAGTGACAATCACTCTAAAT+TGG | - | chr5_3:8498212-8498231 | Msa0796460:intron | 30.0% | |
| AGCATCTTATTGTGTTGAAA+TGG | - | chr5_3:8498266-8498285 | Msa0796460:intron | 30.0% | |
| AATTAACAGTAGAAGTGACA+CGG | + | chr5_3:8498317-8498336 | None:intergenic | 30.0% | |
| AACTGACATTATCTATGGTT+TGG | - | chr5_3:8498477-8498496 | Msa0796460:intron | 30.0% | |
| !!! | GTTCAATTACGATTTTTTCG+TGG | - | chr5_3:8498511-8498530 | Msa0796460:intron | 30.0% |
| ! | ATGGAACAATATTGATGGTT+TGG | - | chr5_3:8498595-8498614 | Msa0796460:intron | 30.0% |
| ! | GCATTTTTCTTTGCTTCTTT+TGG | + | chr5_3:8498679-8498698 | None:intergenic | 30.0% |
| GAGTCTAGATTGATTATTGT+AGG | - | chr5_3:8499231-8499250 | Msa0796460:intron | 30.0% | |
| TAGATTGATTATTGTAGGTG+TGG | - | chr5_3:8499236-8499255 | Msa0796460:intron | 30.0% | |
| ATTATTGTAGGTGTGGTTTA+TGG | - | chr5_3:8499243-8499262 | Msa0796460:intron | 30.0% | |
| GATGGAATAGAATTTCTACT+TGG | - | chr5_3:8499402-8499421 | Msa0796460:five_prime_UTR | 30.0% | |
| TGTATATGTCTCAATAGAGT+AGG | - | chr5_3:8499505-8499524 | Msa0796460:five_prime_UTR | 30.0% | |
| ! | GAAATAATAATGTGGACTAC+AGG | - | chr5_3:8499609-8499628 | Msa0796460:five_prime_UTR | 30.0% |
| AAATGAAAACCAAAGTACGG+TGG | + | chr5_3:8496534-8496553 | None:intergenic | 35.0% | |
| AATCCTGAATAAGTGGGTAT+GGG | + | chr5_3:8496572-8496591 | None:intergenic | 35.0% | |
| TAATCCTGAATAAGTGGGTA+TGG | + | chr5_3:8496573-8496592 | None:intergenic | 35.0% | |
| TTGTGTTAAGAAGAATGTGG+TGG | + | chr5_3:8496690-8496709 | None:intergenic | 35.0% | |
| GTGTTGTGTTAAGAAGAATG+TGG | + | chr5_3:8496693-8496712 | None:intergenic | 35.0% | |
| ATCAGTTGAGAGTGAGATAT+AGG | + | chr5_3:8496724-8496743 | None:intergenic | 35.0% | |
| TGATGTACAGAATTTGTGAG+TGG | - | chr5_3:8496862-8496881 | Msa0796460:intron | 35.0% | |
| TGTGAGTGGTTAGTAAATGA+TGG | - | chr5_3:8496876-8496895 | Msa0796460:intron | 35.0% | |
| AACATTGGAGAAAAGGATCA+TGG | - | chr5_3:8496926-8496945 | Msa0796460:intron | 35.0% | |
| !! | TTCTGCTTCTGAGATTTCAA+AGG | - | chr5_3:8497083-8497102 | Msa0796460:intron | 35.0% |
| GTATAGCTTACCGTTAATTG+AGG | + | chr5_3:8497180-8497199 | None:intergenic | 35.0% | |
| ! | CAATACATTTTGGGCCTATT+TGG | - | chr5_3:8497234-8497253 | Msa0796460:intron | 35.0% |
| ! | TGCTTAATGCATTTTGGATC+AGG | - | chr5_3:8497572-8497591 | Msa0796460:intron | 35.0% |
| !! | CTTATTTTCATAAGCTCTCC+AGG | - | chr5_3:8497702-8497721 | Msa0796460:CDS | 35.0% |
| AGAGTAACAACATGTTTGGT+TGG | - | chr5_3:8497944-8497963 | Msa0796460:CDS | 35.0% | |
| CCCATTCGACAATTAGTAAA+TGG | + | chr5_3:8498036-8498055 | None:intergenic | 35.0% | |
| AATTGTCGAATGGGTACTAT+TGG | - | chr5_3:8498042-8498061 | Msa0796460:intron | 35.0% | |
| GAATGGGTACTATTGGAAAA+TGG | - | chr5_3:8498049-8498068 | Msa0796460:intron | 35.0% | |
| CTCTAAATTGGATGTTGCTA+TGG | - | chr5_3:8498224-8498243 | Msa0796460:intron | 35.0% | |
| CACTTCTACTGTTAATTCTG+CGG | - | chr5_3:8498320-8498339 | Msa0796460:intron | 35.0% | |
| CTGTGAACTGACATTATCTA+TGG | - | chr5_3:8498472-8498491 | Msa0796460:intron | 35.0% | |
| !!! | TTTTTTCGTGGTTCAATGTC+TGG | - | chr5_3:8498523-8498542 | Msa0796460:intron | 35.0% |
| !! | TGTTTCATGTAAGCTTTGAG+AGG | - | chr5_3:8498628-8498647 | Msa0796460:intron | 35.0% |
| AAGATCAAAAGCAAGCACAT+TGG | - | chr5_3:8499049-8499068 | Msa0796460:CDS | 35.0% | |
| ATGGCCATACAGAAAAGAAA+GGG | - | chr5_3:8499287-8499306 | Msa0796460:intron | 35.0% | |
| !! | GCTTCTGAAGATCTCTATTT+TGG | - | chr5_3:8499312-8499331 | Msa0796460:five_prime_UTR | 35.0% |
| CAAACTCCACAAGCAAAAAT+GGG | - | chr5_3:8499377-8499396 | Msa0796460:five_prime_UTR | 35.0% | |
| !! | GTAGCAGTTCTTGATTTGTT+TGG | - | chr5_3:8499478-8499497 | Msa0796460:five_prime_UTR | 35.0% |
| ! | GATTACATTTTGTATGGCAG+AGG | + | chr5_3:8499581-8499600 | None:intergenic | 35.0% |
| ! | TCCAAGCACATTGATTGGAT+TGG | - | chr5_3:8496387-8496406 | Msa0796460:three_prime_UTR | 40.0% |
| GATCTAGACAAGAACTCCAT+AGG | + | chr5_3:8497054-8497073 | None:intergenic | 40.0% | |
| GATTTCTGCGCCTCAATTAA+CGG | - | chr5_3:8497167-8497186 | Msa0796460:intron | 40.0% | |
| TTATGGATCCATAAGCTCTC+AGG | - | chr5_3:8497316-8497335 | Msa0796460:CDS | 40.0% | |
| TATGGATCCATAAGCTCTCA+GGG | - | chr5_3:8497317-8497336 | Msa0796460:CDS | 40.0% | |
| TCTGGAGAGCTTATAGAAGT+AGG | - | chr5_3:8497498-8497517 | Msa0796460:intron | 40.0% | |
| ! | AGTAGGTTGAAAACAGCTTC+TGG | - | chr5_3:8497515-8497534 | Msa0796460:intron | 40.0% |
| TAAACCCTTGTGAGACTGTT+TGG | - | chr5_3:8497632-8497651 | Msa0796460:intron | 40.0% | |
| AAACCCTTGTGAGACTGTTT+GGG | - | chr5_3:8497633-8497652 | Msa0796460:intron | 40.0% | |
| TATCCCAAACAGTCTCACAA+GGG | + | chr5_3:8497639-8497658 | None:intergenic | 40.0% | |
| TGTGGAAACAGCTTATGACA+TGG | - | chr5_3:8497662-8497681 | Msa0796460:intron | 40.0% | |
| GCTGTTCTTATAAGCTATCC+TGG | + | chr5_3:8497723-8497742 | None:intergenic | 40.0% | |
| GTAAATGGTATGAGCTTTCC+AGG | + | chr5_3:8498021-8498040 | None:intergenic | 40.0% | |
| ATAAGATGCTAAGAGCTGTG+TGG | + | chr5_3:8498256-8498275 | None:intergenic | 40.0% | |
| AACTGAACCAGACAGTTCAA+CGG | - | chr5_3:8498437-8498456 | Msa0796460:intron | 40.0% | |
| ! | CTATGGTTTGGCTATTTGAG+TGG | - | chr5_3:8498489-8498508 | Msa0796460:intron | 40.0% |
| TCAATAAGTCCCTACGATAG+AGG | - | chr5_3:8498700-8498719 | Msa0796460:intron | 40.0% | |
| TCTGCTATTCCTCTATCGTA+GGG | + | chr5_3:8498712-8498731 | None:intergenic | 40.0% | |
| TTCTGCTATTCCTCTATCGT+AGG | + | chr5_3:8498713-8498732 | None:intergenic | 40.0% | |
| TTGTTGCAGGTTACGGAAAA+AGG | - | chr5_3:8498802-8498821 | Msa0796460:intron | 40.0% | |
| ! | TCATTTCAGGTGCATTACGA+TGG | - | chr5_3:8498901-8498920 | Msa0796460:CDS | 40.0% |
| TGCATTACGATGGAAACATG+TGG | - | chr5_3:8498911-8498930 | Msa0796460:CDS | 40.0% | |
| ATCAAAAGCAAGCACATTGG+AGG | - | chr5_3:8499052-8499071 | Msa0796460:CDS | 40.0% | |
| CATGGCCATACAGAAAAGAA+AGG | - | chr5_3:8499286-8499305 | Msa0796460:intron | 40.0% | |
| ! | GCTTCCCTTTCTTTTCTGTA+TGG | + | chr5_3:8499294-8499313 | None:intergenic | 40.0% |
| GCAAACTCCACAAGCAAAAA+TGG | - | chr5_3:8499376-8499395 | Msa0796460:five_prime_UTR | 40.0% | |
| !! | CATCAACCCATTTTTGCTTG+TGG | + | chr5_3:8499386-8499405 | None:intergenic | 40.0% |
| !! | CACAAGCAAAAATGGGTTGA+TGG | - | chr5_3:8499384-8499403 | Msa0796460:five_prime_UTR | 40.0% |
| ACTGGTCCAAGCACATTGAT+TGG | - | chr5_3:8496382-8496401 | Msa0796460:three_prime_UTR | 45.0% | |
| GCCAATCCAATCAATGTGCT+TGG | + | chr5_3:8496391-8496410 | None:intergenic | 45.0% | |
| CTACTACTACCACCGTACTT+TGG | - | chr5_3:8496522-8496541 | Msa0796460:three_prime_UTR | 45.0% | |
| GAACCCATACCCACTTATTC+AGG | - | chr5_3:8496566-8496585 | Msa0796460:exon | 45.0% | |
| GGAGAAAAGGATCATGGCAA+TGG | - | chr5_3:8496932-8496951 | Msa0796460:intron | 45.0% | |
| AAAGGATCATGGCAATGGCA+AGG | - | chr5_3:8496937-8496956 | Msa0796460:intron | 45.0% | |
| AAGGATCATGGCAATGGCAA+GGG | - | chr5_3:8496938-8496957 | Msa0796460:intron | 45.0% | |
| AAGAACTCCATAGGCTCAAG+AGG | + | chr5_3:8497045-8497064 | None:intergenic | 45.0% | |
| TGGAGTTCTTGTCTAGATCC+TGG | - | chr5_3:8497055-8497074 | Msa0796460:intron | 45.0% | |
| TATGGATCCATAAGCTCTCC+TGG | + | chr5_3:8497309-8497328 | None:intergenic | 45.0% | |
| AAGTTGTCCCTGAGAGCTTA+TGG | + | chr5_3:8497327-8497346 | None:intergenic | 45.0% | |
| CTATCCCAAACAGTCTCACA+AGG | + | chr5_3:8497640-8497659 | None:intergenic | 45.0% | |
| ! | AGACTGTTTGGGATAGCTTG+TGG | - | chr5_3:8497644-8497663 | Msa0796460:intron | 45.0% |
| ! | CTACTGCTATTTGCCCTGTT+TGG | + | chr5_3:8497852-8497871 | None:intergenic | 45.0% |
| ! | TGTGTTCATCTTTTGCAGCC+TGG | - | chr5_3:8498000-8498019 | Msa0796460:CDS | 45.0% |
| ACTTGCATCAGAAGCAGCAT+GGG | - | chr5_3:8498076-8498095 | Msa0796460:intron | 45.0% | |
| CATTCTGCACTGTCAATTGC+CGG | - | chr5_3:8498156-8498175 | Msa0796460:intron | 45.0% | |
| GTTGAAATGGCAGAGTTAGC+AGG | - | chr5_3:8498279-8498298 | Msa0796460:intron | 45.0% | |
| GTGAGAGTCATTAGATCACC+TGG | + | chr5_3:8498360-8498379 | None:intergenic | 45.0% | |
| !! | AAAGGAAGTACCTGTTGCAG+CGG | + | chr5_3:8498388-8498407 | None:intergenic | 45.0% |
| AACATCTGACACTCAGAAGC+AGG | + | chr5_3:8498751-8498770 | None:intergenic | 45.0% | |
| !! | GGGAGATTTGTTGCAGGTTA+CGG | - | chr5_3:8498795-8498814 | Msa0796460:intron | 45.0% |
| TGTGTAACGAAGACTCTGCA+TGG | - | chr5_3:8499268-8499287 | Msa0796460:intron | 45.0% | |
| TTTGGCCTCAAAACTGCACA+AGG | - | chr5_3:8499330-8499349 | Msa0796460:five_prime_UTR | 45.0% | |
| ! | GAAGACCTTGTGCAGTTTTG+AGG | + | chr5_3:8499338-8499357 | None:intergenic | 45.0% |
| TGGACTACAGGAACTGCTTA+TGG | - | chr5_3:8499621-8499640 | Msa0796460:five_prime_UTR | 45.0% | |
| ! | AGCGCGTTTTCGTACGTAGT+AGG | + | chr5_3:8496463-8496482 | None:intergenic | 50.0% |
| !! | GTTGGTGGCTCAGGAATTTC+TGG | + | chr5_3:8497021-8497040 | None:intergenic | 50.0% |
| !! | ATAGGCTCAAGAGGTGTTGG+TGG | + | chr5_3:8497036-8497055 | None:intergenic | 50.0% |
| ACCAACACCTCTTGAGCCTA+TGG | - | chr5_3:8497035-8497054 | Msa0796460:intron | 50.0% | |
| ! | TCCATAGGCTCAAGAGGTGT+TGG | + | chr5_3:8497039-8497058 | None:intergenic | 50.0% |
| CTCAGAAGCAGAAAGACTCC+AGG | + | chr5_3:8497076-8497095 | None:intergenic | 50.0% | |
| TGAGGCGCAGAAATCACTTC+CGG | + | chr5_3:8497162-8497181 | None:intergenic | 50.0% | |
| ATCCATAAGCTCTCCTGGAC+GGG | + | chr5_3:8497304-8497323 | None:intergenic | 50.0% | |
| GATCCATAAGCTCTCCTGGA+CGG | + | chr5_3:8497305-8497324 | None:intergenic | 50.0% | |
| CACTTGCATCAGAAGCAGCA+TGG | - | chr5_3:8498075-8498094 | Msa0796460:intron | 50.0% | |
| CGTTCAACCGTTGAACTGTC+TGG | + | chr5_3:8498447-8498466 | None:intergenic | 50.0% | |
| ATCTGACACTCAGAAGCAGG+AGG | + | chr5_3:8498748-8498767 | None:intergenic | 50.0% | |
| TGAGAACCATTCTCCATGCG+AGG | - | chr5_3:8498774-8498793 | Msa0796460:intron | 50.0% | |
| GAGAACCATTCTCCATGCGA+GGG | - | chr5_3:8498775-8498794 | Msa0796460:intron | 50.0% | |
| AATCTCCCTCGCATGGAGAA+TGG | + | chr5_3:8498783-8498802 | None:intergenic | 50.0% | |
| TGCAACAAATCTCCCTCGCA+TGG | + | chr5_3:8498790-8498809 | None:intergenic | 50.0% | |
| !! | ATGCGAGGGAGATTTGTTGC+AGG | - | chr5_3:8498789-8498808 | Msa0796460:intron | 50.0% |
| !! | TCAAGAGGTGTTGGTGGCTC+AGG | + | chr5_3:8497030-8497049 | None:intergenic | 55.0% |
| GGTATTTGTGATGCCCGTCC+AGG | - | chr5_3:8497288-8497307 | Msa0796460:CDS | 55.0% | |
| AGCAACCACAGAAGCCAACG+CGG | + | chr5_3:8498190-8498209 | None:intergenic | 55.0% | |
| GCGGTCGATATTCAAACGCC+AGG | - | chr5_3:8498339-8498358 | Msa0796460:intron | 55.0% | |
| TGCCCGTCCAGGAGAGCTTA+TGG | - | chr5_3:8497299-8497318 | Msa0796460:CDS | 60.0% | |
| AACCACAGAAGCCAACGCGG+AGG | + | chr5_3:8498187-8498206 | None:intergenic | 60.0% | |
| ! | AGCCAACGCGGAGGCTAGTC+CGG | + | chr5_3:8498178-8498197 | None:intergenic | 65.0% |
| !! | AGCCTCCGCGTTGGCTTCTG+TGG | - | chr5_3:8498182-8498201 | Msa0796460:intron | 65.0% |
| CTCACTGCTGCCGCTGCAAC+AGG | - | chr5_3:8498375-8498394 | Msa0796460:intron | 65.0% | |
| !! | TGCCGGACTAGCCTCCGCGT+TGG | - | chr5_3:8498173-8498192 | Msa0796460:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 8496381 | 8499682 | 8496381 | ID=Msa0796460;Name=Msa0796460 |
| chr5_3 | mRNA | 8496381 | 8499682 | 8496381 | ID=Msa0796460-mRNA-1;Parent=Msa0796460;Name=Msa0796460-mRNA-1;_AED=0.04;_eAED=0.04;_QI=412|1|1|1|0.83|0.71|7|191|401 |
| chr5_3 | exon | 8496381 | 8496810 | 8496381 | ID=Msa0796460-mRNA-1:exon:3594;Parent=Msa0796460-mRNA-1 |
| chr5_3 | exon | 8496966 | 8497023 | 8496966 | ID=Msa0796460-mRNA-1:exon:3593;Parent=Msa0796460-mRNA-1 |
| chr5_3 | exon | 8497104 | 8497153 | 8497104 | ID=Msa0796460-mRNA-1:exon:3592;Parent=Msa0796460-mRNA-1 |
| chr5_3 | exon | 8497240 | 8497422 | 8497240 | ID=Msa0796460-mRNA-1:exon:3591;Parent=Msa0796460-mRNA-1 |
| chr5_3 | exon | 8497667 | 8498045 | 8497667 | ID=Msa0796460-mRNA-1:exon:3590;Parent=Msa0796460-mRNA-1 |
| chr5_3 | exon | 8498875 | 8499191 | 8498875 | ID=Msa0796460-mRNA-1:exon:3589;Parent=Msa0796460-mRNA-1 |
| chr5_3 | exon | 8499291 | 8499682 | 8499291 | ID=Msa0796460-mRNA-1:exon:3588;Parent=Msa0796460-mRNA-1 |
| chr5_3 | five_prime_UTR | 8499291 | 8499682 | 8499291 | ID=Msa0796460-mRNA-1:five_prime_utr;Parent=Msa0796460-mRNA-1 |
| chr5_3 | five_prime_UTR | 8499172 | 8499191 | 8499172 | ID=Msa0796460-mRNA-1:five_prime_utr;Parent=Msa0796460-mRNA-1 |
| chr5_3 | CDS | 8498875 | 8499171 | 8498875 | ID=Msa0796460-mRNA-1:cds;Parent=Msa0796460-mRNA-1 |
| chr5_3 | CDS | 8497667 | 8498045 | 8497667 | ID=Msa0796460-mRNA-1:cds;Parent=Msa0796460-mRNA-1 |
| chr5_3 | CDS | 8497240 | 8497422 | 8497240 | ID=Msa0796460-mRNA-1:cds;Parent=Msa0796460-mRNA-1 |
| chr5_3 | CDS | 8497104 | 8497153 | 8497104 | ID=Msa0796460-mRNA-1:cds;Parent=Msa0796460-mRNA-1 |
| chr5_3 | CDS | 8496966 | 8497023 | 8496966 | ID=Msa0796460-mRNA-1:cds;Parent=Msa0796460-mRNA-1 |
| chr5_3 | CDS | 8496572 | 8496810 | 8496572 | ID=Msa0796460-mRNA-1:cds;Parent=Msa0796460-mRNA-1 |
| chr5_3 | three_prime_UTR | 8496381 | 8496571 | 8496381 | ID=Msa0796460-mRNA-1:three_prime_utr;Parent=Msa0796460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
