AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0370070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370070 MtrunA17_Chr3g0114991 98.455 453 6 1 1 453 1 452 0.0 919
Msa0370070 MtrunA17_Chr1g0156521 56.721 305 105 7 157 450 111 399 1.58e-113 339
Msa0370070 MtrunA17_Chr4g0042091 51.653 242 103 7 215 449 200 434 3.71e-72 234
Msa0370070 MtrunA17_Chr3g0104431 49.798 247 109 10 213 450 147 387 1.96e-65 215
Msa0370070 MtrunA17_Chr2g0280501 41.077 297 142 12 177 451 91 376 6.94e-49 171
Msa0370070 MtrunA17_Chr5g0399041 38.426 216 97 9 241 451 105 289 3.14e-35 132
Msa0370070 MtrunA17_Chr8g0376191 42.529 174 85 6 283 451 2 165 5.15e-32 120
Msa0370070 MtrunA17_Chr4g0056461 36.019 211 98 6 244 451 98 274 2.95e-31 121
Msa0370070 MtrunA17_Chr5g0445321 31.122 196 120 5 257 450 1 183 7.10e-29 112
Msa0370070 MtrunA17_Chr2g0280521 50.909 110 53 1 248 357 10 118 1.01e-27 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370070 AT1G75710.1 54.515 299 92 8 183 451 174 458 1.56e-99 306
Msa0370070 AT5G54630.1 49.231 260 112 8 205 449 215 469 3.39e-72 235
Msa0370070 AT4G27240.1 51.046 239 102 7 219 449 197 428 1.61e-70 230
Msa0370070 AT2G29660.1 47.244 254 107 11 217 450 125 371 2.20e-57 194
Msa0370070 AT4G27240.2 49.528 212 93 6 219 422 197 402 3.99e-57 195
Msa0370070 AT1G11490.2 38.247 251 127 9 217 451 126 364 4.21e-44 158
Msa0370070 AT1G11490.1 38.247 251 127 9 217 451 126 364 4.21e-44 158
Msa0370070 AT1G62520.1 37.850 214 95 9 242 451 100 279 2.29e-31 122
Msa0370070 AT4G22560.1 34.419 215 94 7 241 451 92 263 3.47e-29 115
Msa0370070 AT4G12450.1 34.071 226 99 8 236 451 91 276 2.47e-26 108

Find 104 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTGGAGCTGGTTCTTTC+AGG 0.067042 3_1:-67503344 Msa0370070:CDS
GTTGCTGCTGTTGTTGTTTC+TGG 0.078027 3_1:+67503537 None:intergenic
TGCTGGGGCTTATTCTAATT+TGG 0.219703 3_1:-67502121 Msa0370070:CDS
ACAACATTTGTTTGTTCTTT+AGG 0.234916 3_1:-67502426 Msa0370070:CDS
CTTCCTTCTGCTGTTGTTGT+TGG 0.236133 3_1:+67503733 None:intergenic
TCTGTGTGTTGTGGACTTTA+AGG 0.242925 3_1:+67502565 None:intergenic
CATCTTCTTGCATTTCTTGT+TGG 0.257607 3_1:+67503608 None:intergenic
TACAGATATTCACAAGAAAA+AGG 0.264395 3_1:-67503499 Msa0370070:CDS
GTGTGAGTGGAGGCTCTTTA+TGG 0.265286 3_1:+67504019 None:intergenic
GTCTCTGTACTCTTCGAATT+TGG 0.269606 3_1:+67502533 None:intergenic
ATGTTCTTGCTTGTATCTTC+TGG 0.271296 3_1:+67502654 None:intergenic
GCAGCATCTTCTAACTCTTC+TGG 0.278189 3_1:-67503360 Msa0370070:CDS
TTGTAATGGTAACCTTTCTT+TGG 0.293073 3_1:+67503856 None:intergenic
CTTTCAGGGGAATGCAGTTT+AGG 0.302208 3_1:-67503329 Msa0370070:CDS
GTACTCTTCGAATTTGGTTA+TGG 0.302636 3_1:+67502539 None:intergenic
TCGGTTAGTGCTGGTGATGC+TGG 0.309847 3_1:-67502138 Msa0370070:CDS
ATGGTTGTTGACCCTGTTCT+TGG 0.318988 3_1:-67503279 Msa0370070:CDS
CGACAAAGCTAGTAGTGTTT+TGG 0.320624 3_1:-67502277 Msa0370070:CDS
TTCATTCAAAGGAGCTTTCA+TGG 0.322337 3_1:+67503428 None:intergenic
AGAGGGCAATGTTGGTTTGT+AGG 0.352259 3_1:-67502224 Msa0370070:CDS
TATAGTAGAAAACTAGAATA+TGG 0.357201 3_1:+67503956 None:intergenic
TTCTTTGCAATGTCACTTGA+TGG 0.364460 3_1:-67501988 Msa0370070:three_prime_UTR
TTCTGGAGCTGGTTCTTTCA+GGG 0.364982 3_1:-67503343 Msa0370070:CDS
GATTGTATATATGTATATTA+AGG 0.369987 3_1:-67501813 Msa0370070:three_prime_UTR
TGCTTTGTTGTAATCTATAG+AGG 0.380068 3_1:-67502060 Msa0370070:CDS
TGCAAGAAGATGAAATGTTC+AGG 0.398226 3_1:-67503597 Msa0370070:CDS
CGGTTAGTGCTGGTGATGCT+GGG 0.399016 3_1:-67502137 Msa0370070:CDS
GGAAGGTGGTAGTAATGTTA+TGG 0.410378 3_1:-67502172 Msa0370070:CDS
GAGGGCAATGTTGGTTTGTA+GGG 0.412856 3_1:-67502223 Msa0370070:CDS
CCCTCTTGGGCGGTGGTAAG+AGG 0.414370 3_1:-67503783 Msa0370070:CDS
TTCATAATCTCACCACAATC+AGG 0.424627 3_1:+67503213 None:intergenic
TGACAGCTTGATGAAGTTCA+AGG 0.429196 3_1:+67503181 None:intergenic
GCTTCTTTAGCCAGCTTGAA+TGG 0.430042 3_1:+67502616 None:intergenic
TTGGCTTATATGATTTGTAA+TGG 0.438159 3_1:+67503842 None:intergenic
TTGGTTTGTAGGGTGATAGC+AGG 0.448552 3_1:-67502213 Msa0370070:CDS
TTGGGAGTTGGGAGTGTGAG+TGG 0.450431 3_1:+67504006 None:intergenic
TATGCCGCACACGTTGCATT+GGG 0.458299 3_1:+67502368 None:intergenic
TCTCTAGTGAAACCAAGAAC+AGG 0.464340 3_1:+67503267 None:intergenic
AACAGAGAAACAACCCTCTT+GGG 0.466270 3_1:-67503796 Msa0370070:CDS
CTCACTCCCACTAAAATCAA+TGG 0.466339 3_1:-67501854 Msa0370070:three_prime_UTR
CATATATTAGTTTCTGAGCT+GGG 0.466347 3_1:-67502678 Msa0370070:intron
TCTAGCTAAATTTAGTTCAC+TGG 0.466837 3_1:-67501932 Msa0370070:three_prime_UTR
AGAGGTTTGAGGAACCGTTT+AGG 0.468308 3_1:+67502403 None:intergenic
GTTTCCGTCTGCTATGCAGC+GGG 0.469149 3_1:+67502470 None:intergenic
GCATATATTAGTTTCTGAGC+TGG 0.470447 3_1:-67502679 Msa0370070:intron
TCTTCTAACTCTTCTGGAGC+TGG 0.470479 3_1:-67503354 Msa0370070:CDS
GTTTGTTCTTTAGGCCTAAA+CGG 0.471880 3_1:-67502417 Msa0370070:CDS
AAACAGAGAAACAACCCTCT+TGG 0.479509 3_1:-67503797 Msa0370070:CDS
AACTGCATTTATGTATGTAT+TGG 0.481938 3_1:-67501887 Msa0370070:three_prime_UTR
ACAATCAGGACAAGAACAAA+TGG 0.483435 3_1:+67503227 None:intergenic
TGTTGAGTTGCAGAGGTTTG+AGG 0.485252 3_1:+67502392 None:intergenic
CAGACGGAAACGAGTTACTA+AGG 0.485531 3_1:-67502458 Msa0370070:CDS
TACAAATCATATAAGCCAAA+AGG 0.487150 3_1:-67503838 Msa0370070:CDS
ATTTGTTCTTGTCCTGATTG+TGG 0.489818 3_1:-67503225 Msa0370070:CDS
TTATGCCGCACACGTTGCAT+TGG 0.500527 3_1:+67502367 None:intergenic
AAACACGGGTTTAAGTTGAA+TGG 0.502774 3_1:-67502342 Msa0370070:CDS
TGATGAGAAGAGGGCAATGT+TGG 0.513521 3_1:-67502232 Msa0370070:CDS
CATTCGACACTCGTAACAAC+CGG 0.518656 3_1:+67503299 None:intergenic
TCTGGAGCTGGTTCTTTCAG+GGG 0.520859 3_1:-67503342 Msa0370070:CDS
GACCTTTCAGGTTGTGAGAG+TGG 0.524110 3_1:-67502255 Msa0370070:CDS
AAATAATATTCCATTCAAGC+TGG 0.528424 3_1:-67502626 Msa0370070:CDS
AAGCAAGGTAAAATAGCTCT+AGG 0.537013 3_1:+67502078 None:intergenic
TGTTATGGAAGAGTATGATT+CGG 0.537909 3_1:-67502157 Msa0370070:CDS
CGGTTGTTACGAGTGTCGAA+TGG 0.544614 3_1:-67503298 Msa0370070:CDS
TGAGAGTGGTGATGAGAAGA+GGG 0.545449 3_1:-67502241 Msa0370070:CDS
ATGCAGTTTAGGAGACTCTC+CGG 0.548192 3_1:-67503318 Msa0370070:CDS
CTTCCGTTGAGTTCATTCAA+AGG 0.552983 3_1:+67503417 None:intergenic
GAGTATGATTCGGTTAGTGC+TGG 0.553594 3_1:-67502147 Msa0370070:CDS
GTACTAATAAACAAAGTGCT+AGG 0.556960 3_1:-67504051 None:intergenic
GTGAAGAAGAACATGGAAGG+TGG 0.558857 3_1:-67502186 Msa0370070:CDS
GGTTCACTCTGCAACAACAC+TGG 0.561299 3_1:-67503576 Msa0370070:CDS
GAAACAACCCTCTTGGGCGG+TGG 0.562290 3_1:-67503790 Msa0370070:CDS
GTGAGAGTGGTGATGAGAAG+AGG 0.564974 3_1:-67502242 Msa0370070:CDS
TAGAAAACTAGAATATGGTA+TGG 0.565951 3_1:+67503961 None:intergenic
TTAAGTTGAATGGTAGCGAT+GGG 0.566451 3_1:-67502332 Msa0370070:CDS
AAAATGGTGTTTCTATAACA+TGG 0.568328 3_1:+67503904 None:intergenic
CATCAAGCTGTCAAACATGC+AGG 0.569618 3_1:-67503171 Msa0370070:intron
TGAAAGTGAAGACGAAGAAG+AGG 0.573976 3_1:+67503383 None:intergenic
TTTAAGTTGAATGGTAGCGA+TGG 0.575452 3_1:-67502333 Msa0370070:CDS
AGAGTGAAGAAGAACATGGA+AGG 0.577959 3_1:-67502189 Msa0370070:CDS
GCCTCTTACCACCGCCCAAG+AGG 0.582339 3_1:+67503782 None:intergenic
ATGGAAAGAGTACTTAAACT+AGG 0.583068 3_1:-67501835 Msa0370070:three_prime_UTR
CACCACTCTCACAACCTGAA+AGG 0.586123 3_1:+67502253 None:intergenic
TTCCGTCTGCTATGCAGCGG+GGG 0.586954 3_1:+67502472 None:intergenic
TGGTTTGTAGGGTGATAGCA+GGG 0.589739 3_1:-67502212 Msa0370070:CDS
TGTTGTGGACTTTAAGGATG+CGG 0.593997 3_1:+67502571 None:intergenic
CTATAGATTACAACAAAGCA+AGG 0.600839 3_1:+67502063 None:intergenic
ATTGGGATGTTGAGTTGCAG+AGG 0.601738 3_1:+67502385 None:intergenic
AATCCAACAACAACAGCAGA+AGG 0.606544 3_1:-67503736 Msa0370070:CDS
CCTCTTACCACCGCCCAAGA+GGG 0.611776 3_1:+67503783 None:intergenic
GGAGTTGGGAGTGTGAGTGG+AGG 0.612055 3_1:+67504009 None:intergenic
CGTTTCCGTCTGCTATGCAG+CGG 0.617775 3_1:+67502469 None:intergenic
CAACAACACTGGAATGACAA+TGG 0.620216 3_1:-67503565 Msa0370070:CDS
CTCTAGTGAAACCAAGAACA+GGG 0.633221 3_1:+67503268 None:intergenic
AGTGAACTAAATTTAGCTAG+AGG 0.643108 3_1:+67501934 None:intergenic
TTTCCGTCTGCTATGCAGCG+GGG 0.644816 3_1:+67502471 None:intergenic
ACATCCCAATGCAACGTGTG+CGG 0.650064 3_1:-67502372 Msa0370070:CDS
GTGTGCGGCATAATAAAACA+CGG 0.650403 3_1:-67502357 Msa0370070:CDS
GGTTAGTGCTGGTGATGCTG+GGG 0.653244 3_1:-67502136 Msa0370070:CDS
GCTCCTTTGAATGAACTCAA+CGG 0.658606 3_1:-67503420 Msa0370070:CDS
AGAGAAACAACCCTCTTGGG+CGG 0.687568 3_1:-67503793 Msa0370070:CDS
TGTGCGGCATAATAAAACAC+GGG 0.688551 3_1:-67502356 Msa0370070:CDS
AGGGAGAGTGAAGAAGAACA+TGG 0.698562 3_1:-67502193 Msa0370070:CDS
ATATTGACGACAGCAACGAG+TGG 0.716849 3_1:-67502309 Msa0370070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTGAAACTAAAGATTAT+AGG + chr3_1:67502722-67502741 None:intergenic 15.0%
!! GATTGTATATATGTATATTA+AGG - chr3_1:67504032-67504051 Msa0370070:five_prime_UTR 15.0%
!! TTATTGAAACTAAAGATTAT+AGG + chr3_1:67502722-67502741 None:intergenic 15.0%
!! GATTGTATATATGTATATTA+AGG - chr3_1:67504032-67504051 Msa0370070:five_prime_UTR 15.0%
!!! ATTCTTGTTTTAGGTTTATT+GGG + chr3_1:67501860-67501879 None:intergenic 20.0%
!! TATAGTAGAAAACTAGAATA+TGG + chr3_1:67501892-67501911 None:intergenic 20.0%
!! TTGCTCATTGTAAAAAAAAA+TGG + chr3_1:67501960-67501979 None:intergenic 20.0%
!! CTTAAGAAATTAGTTACATT+TGG + chr3_1:67502821-67502840 None:intergenic 20.0%
!!! TAGTCTTAAGTTAAGATTAT+CGG + chr3_1:67502869-67502888 None:intergenic 20.0%
!! TAATCTTAACTTAAGACTAT+CGG - chr3_1:67502870-67502889 Msa0370070:intron 20.0%
!! TATATTCAATTATGGTACAT+TGG + chr3_1:67503106-67503125 None:intergenic 20.0%
!! CACTTAAGTATATTCAATTA+TGG + chr3_1:67503114-67503133 None:intergenic 20.0%
!!! ATTCTTGTTTTAGGTTTATT+GGG + chr3_1:67501860-67501879 None:intergenic 20.0%
!! TATAGTAGAAAACTAGAATA+TGG + chr3_1:67501892-67501911 None:intergenic 20.0%
!! TTGCTCATTGTAAAAAAAAA+TGG + chr3_1:67501960-67501979 None:intergenic 20.0%
!! CTTAAGAAATTAGTTACATT+TGG + chr3_1:67502821-67502840 None:intergenic 20.0%
!!! TAGTCTTAAGTTAAGATTAT+CGG + chr3_1:67502869-67502888 None:intergenic 20.0%
!! TAATCTTAACTTAAGACTAT+CGG - chr3_1:67502870-67502889 Msa0370070:intron 20.0%
!! TATATTCAATTATGGTACAT+TGG + chr3_1:67503106-67503125 None:intergenic 20.0%
!! CACTTAAGTATATTCAATTA+TGG + chr3_1:67503114-67503133 None:intergenic 20.0%
!!! GATTCTTGTTTTAGGTTTAT+TGG + chr3_1:67501861-67501880 None:intergenic 25.0%
!!! TATGGTATGATTCTTGTTTT+AGG + chr3_1:67501869-67501888 None:intergenic 25.0%
! TAGAAAACTAGAATATGGTA+TGG + chr3_1:67501887-67501906 None:intergenic 25.0%
!! AAAATGGTGTTTCTATAACA+TGG + chr3_1:67501944-67501963 None:intergenic 25.0%
! CAAATCAAAAATCCAAAGAA+AGG - chr3_1:67501977-67501996 Msa0370070:three_prime_UTR 25.0%
!! TTGGCTTATATGATTTGTAA+TGG + chr3_1:67502006-67502025 None:intergenic 25.0%
! TACAAATCATATAAGCCAAA+AGG - chr3_1:67502007-67502026 Msa0370070:three_prime_UTR 25.0%
!!! CTTTGTTCTTGTTTTTTCTT+TGG + chr3_1:67502185-67502204 None:intergenic 25.0%
! CAAAGAAAAAACAAGAACAA+AGG - chr3_1:67502183-67502202 Msa0370070:CDS 25.0%
! TACAGATATTCACAAGAAAA+AGG - chr3_1:67502346-67502365 Msa0370070:CDS 25.0%
! TTGAAACTAAAGATTATAGG+TGG + chr3_1:67502719-67502738 None:intergenic 25.0%
! TAATAAATGTCATTATCTCG+AGG + chr3_1:67502793-67502812 None:intergenic 25.0%
!! GATACTAGTATCCATTTTAA+TGG - chr3_1:67502840-67502859 Msa0370070:intron 25.0%
! ATTATCGGTATCCATTAAAA+TGG + chr3_1:67502854-67502873 None:intergenic 25.0%
! TGATTTCTTGGATACATTAA+TGG - chr3_1:67503031-67503050 Msa0370070:intron 25.0%
! CAGAAACTAATATATGCATA+AGG + chr3_1:67503163-67503182 None:intergenic 25.0%
! AAATAATATTCCATTCAAGC+TGG - chr3_1:67503219-67503238 Msa0370070:CDS 25.0%
! ACAACATTTGTTTGTTCTTT+AGG - chr3_1:67503419-67503438 Msa0370070:CDS 25.0%
!!! CTTTTGATAATGTGTATTGA+TGG - chr3_1:67503808-67503827 Msa0370070:CDS 25.0%
! AACTGCATTTATGTATGTAT+TGG - chr3_1:67503958-67503977 Msa0370070:five_prime_UTR 25.0%
!!! GATTCTTGTTTTAGGTTTAT+TGG + chr3_1:67501861-67501880 None:intergenic 25.0%
!!! TATGGTATGATTCTTGTTTT+AGG + chr3_1:67501869-67501888 None:intergenic 25.0%
! TAGAAAACTAGAATATGGTA+TGG + chr3_1:67501887-67501906 None:intergenic 25.0%
!! AAAATGGTGTTTCTATAACA+TGG + chr3_1:67501944-67501963 None:intergenic 25.0%
! CAAATCAAAAATCCAAAGAA+AGG - chr3_1:67501977-67501996 Msa0370070:three_prime_UTR 25.0%
!! TTGGCTTATATGATTTGTAA+TGG + chr3_1:67502006-67502025 None:intergenic 25.0%
! TACAAATCATATAAGCCAAA+AGG - chr3_1:67502007-67502026 Msa0370070:three_prime_UTR 25.0%
!!! CTTTGTTCTTGTTTTTTCTT+TGG + chr3_1:67502185-67502204 None:intergenic 25.0%
! CAAAGAAAAAACAAGAACAA+AGG - chr3_1:67502183-67502202 Msa0370070:CDS 25.0%
! TACAGATATTCACAAGAAAA+AGG - chr3_1:67502346-67502365 Msa0370070:CDS 25.0%
! TTGAAACTAAAGATTATAGG+TGG + chr3_1:67502719-67502738 None:intergenic 25.0%
! TAATAAATGTCATTATCTCG+AGG + chr3_1:67502793-67502812 None:intergenic 25.0%
!! GATACTAGTATCCATTTTAA+TGG - chr3_1:67502840-67502859 Msa0370070:intron 25.0%
! ATTATCGGTATCCATTAAAA+TGG + chr3_1:67502854-67502873 None:intergenic 25.0%
! TGATTTCTTGGATACATTAA+TGG - chr3_1:67503031-67503050 Msa0370070:intron 25.0%
! CAGAAACTAATATATGCATA+AGG + chr3_1:67503163-67503182 None:intergenic 25.0%
! AAATAATATTCCATTCAAGC+TGG - chr3_1:67503219-67503238 Msa0370070:CDS 25.0%
! ACAACATTTGTTTGTTCTTT+AGG - chr3_1:67503419-67503438 Msa0370070:CDS 25.0%
!!! CTTTTGATAATGTGTATTGA+TGG - chr3_1:67503808-67503827 Msa0370070:CDS 25.0%
! AACTGCATTTATGTATGTAT+TGG - chr3_1:67503958-67503977 Msa0370070:five_prime_UTR 25.0%
!!! TTTTAGGTTTATTGGGAGTT+GGG + chr3_1:67501853-67501872 None:intergenic 30.0%
TTGTAATGGTAACCTTTCTT+TGG + chr3_1:67501992-67502011 None:intergenic 30.0%
! AGTTAGGACAATTGATTTCT+TGG - chr3_1:67503019-67503038 Msa0370070:intron 30.0%
! CATATATTAGTTTCTGAGCT+GGG - chr3_1:67503167-67503186 Msa0370070:intron 30.0%
! TGTTATGGAAGAGTATGATT+CGG - chr3_1:67503688-67503707 Msa0370070:CDS 30.0%
CTATAGATTACAACAAAGCA+AGG + chr3_1:67503785-67503804 None:intergenic 30.0%
! TGCTTTGTTGTAATCTATAG+AGG - chr3_1:67503785-67503804 Msa0370070:CDS 30.0%
!!! GTGTATTGATGGTTTTTTGT+TGG - chr3_1:67503819-67503838 Msa0370070:CDS 30.0%
!!! TGATGGTTTTTTGTTGGATT+AGG - chr3_1:67503825-67503844 Msa0370070:CDS 30.0%
!!! GATGGTTTTTTGTTGGATTA+GGG - chr3_1:67503826-67503845 Msa0370070:CDS 30.0%
!!! ATGGTTTTTTGTTGGATTAG+GGG - chr3_1:67503827-67503846 Msa0370070:CDS 30.0%
AGTGAACTAAATTTAGCTAG+AGG + chr3_1:67503914-67503933 None:intergenic 30.0%
! TCTAGCTAAATTTAGTTCAC+TGG - chr3_1:67503913-67503932 Msa0370070:five_prime_UTR 30.0%
!!! CTCTTTCCATTGATTTTAGT+GGG + chr3_1:67504000-67504019 None:intergenic 30.0%
!!! ACTCTTTCCATTGATTTTAG+TGG + chr3_1:67504001-67504020 None:intergenic 30.0%
!! ATGGAAAGAGTACTTAAACT+AGG - chr3_1:67504010-67504029 Msa0370070:five_prime_UTR 30.0%
!!! TTTTAGGTTTATTGGGAGTT+GGG + chr3_1:67501853-67501872 None:intergenic 30.0%
TTGTAATGGTAACCTTTCTT+TGG + chr3_1:67501992-67502011 None:intergenic 30.0%
! AGTTAGGACAATTGATTTCT+TGG - chr3_1:67503019-67503038 Msa0370070:intron 30.0%
! CATATATTAGTTTCTGAGCT+GGG - chr3_1:67503167-67503186 Msa0370070:intron 30.0%
! TGTTATGGAAGAGTATGATT+CGG - chr3_1:67503688-67503707 Msa0370070:CDS 30.0%
CTATAGATTACAACAAAGCA+AGG + chr3_1:67503785-67503804 None:intergenic 30.0%
! TGCTTTGTTGTAATCTATAG+AGG - chr3_1:67503785-67503804 Msa0370070:CDS 30.0%
!!! GTGTATTGATGGTTTTTTGT+TGG - chr3_1:67503819-67503838 Msa0370070:CDS 30.0%
!!! TGATGGTTTTTTGTTGGATT+AGG - chr3_1:67503825-67503844 Msa0370070:CDS 30.0%
!!! GATGGTTTTTTGTTGGATTA+GGG - chr3_1:67503826-67503845 Msa0370070:CDS 30.0%
!!! ATGGTTTTTTGTTGGATTAG+GGG - chr3_1:67503827-67503846 Msa0370070:CDS 30.0%
AGTGAACTAAATTTAGCTAG+AGG + chr3_1:67503914-67503933 None:intergenic 30.0%
! TCTAGCTAAATTTAGTTCAC+TGG - chr3_1:67503913-67503932 Msa0370070:five_prime_UTR 30.0%
!!! CTCTTTCCATTGATTTTAGT+GGG + chr3_1:67504000-67504019 None:intergenic 30.0%
!!! ACTCTTTCCATTGATTTTAG+TGG + chr3_1:67504001-67504020 None:intergenic 30.0%
!! ATGGAAAGAGTACTTAAACT+AGG - chr3_1:67504010-67504029 Msa0370070:five_prime_UTR 30.0%
!!! GTTTTAGGTTTATTGGGAGT+TGG + chr3_1:67501854-67501873 None:intergenic 35.0%
!!! TCTCTGTTTTTTGTGGCTTT+TGG + chr3_1:67502037-67502056 None:intergenic 35.0%
!!! GGTTGTTTCTCTGTTTTTTG+TGG + chr3_1:67502044-67502063 None:intergenic 35.0%
!!! TTCTTTGGCTGTTTTTGTTC+TGG + chr3_1:67502170-67502189 None:intergenic 35.0%
CATCTTCTTGCATTTCTTGT+TGG + chr3_1:67502240-67502259 None:intergenic 35.0%
TGCAAGAAGATGAAATGTTC+AGG - chr3_1:67502248-67502267 Msa0370070:CDS 35.0%
CACAAGAAAAAGGTTTCACT+TGG - chr3_1:67502356-67502375 Msa0370070:CDS 35.0%
AAGAAAAAGGTTTCACTTGG+TGG - chr3_1:67502359-67502378 Msa0370070:CDS 35.0%
TTCATTCAAAGGAGCTTTCA+TGG + chr3_1:67502420-67502439 None:intergenic 35.0%
ACAATCAGGACAAGAACAAA+TGG + chr3_1:67502621-67502640 None:intergenic 35.0%
ATTTGTTCTTGTCCTGATTG+TGG - chr3_1:67502620-67502639 Msa0370070:CDS 35.0%
TTCATAATCTCACCACAATC+AGG + chr3_1:67502635-67502654 None:intergenic 35.0%
TATATGTATTGAAGACACCG+AGG + chr3_1:67502946-67502965 None:intergenic 35.0%
TATTCTCTCGACTAAGAGTT+AGG - chr3_1:67503003-67503022 Msa0370070:intron 35.0%
! TCTTGGATACATTAATGGAC+CGG - chr3_1:67503036-67503055 Msa0370070:intron 35.0%
! GCATATATTAGTTTCTGAGC+TGG - chr3_1:67503166-67503185 Msa0370070:intron 35.0%
ATGTTCTTGCTTGTATCTTC+TGG + chr3_1:67503194-67503213 None:intergenic 35.0%
! TTATGGTTTTCTGTGTGTTG+TGG + chr3_1:67503292-67503311 None:intergenic 35.0%
GTACTCTTCGAATTTGGTTA+TGG + chr3_1:67503309-67503328 None:intergenic 35.0%
GTTTGTTCTTTAGGCCTAAA+CGG - chr3_1:67503428-67503447 Msa0370070:CDS 35.0%
!! AAACACGGGTTTAAGTTGAA+TGG - chr3_1:67503503-67503522 Msa0370070:CDS 35.0%
!! TTTAAGTTGAATGGTAGCGA+TGG - chr3_1:67503512-67503531 Msa0370070:CDS 35.0%
!! TTAAGTTGAATGGTAGCGAT+GGG - chr3_1:67503513-67503532 Msa0370070:CDS 35.0%
AAGCAAGGTAAAATAGCTCT+AGG + chr3_1:67503770-67503789 None:intergenic 35.0%
! TTCTTTGCAATGTCACTTGA+TGG - chr3_1:67503857-67503876 Msa0370070:CDS 35.0%
!!! TTAGTTCACTGGCGTTTTTT+AGG - chr3_1:67503924-67503943 Msa0370070:five_prime_UTR 35.0%
!!! TAGTTCACTGGCGTTTTTTA+GGG - chr3_1:67503925-67503944 Msa0370070:five_prime_UTR 35.0%
! TACTTCCTAGCACTTTGTTT+AGG + chr3_1:67501802-67501821 None:intergenic 35.0%
!!! GTTTTAGGTTTATTGGGAGT+TGG + chr3_1:67501854-67501873 None:intergenic 35.0%
!!! TCTCTGTTTTTTGTGGCTTT+TGG + chr3_1:67502037-67502056 None:intergenic 35.0%
!!! GGTTGTTTCTCTGTTTTTTG+TGG + chr3_1:67502044-67502063 None:intergenic 35.0%
!!! TTCTTTGGCTGTTTTTGTTC+TGG + chr3_1:67502170-67502189 None:intergenic 35.0%
CATCTTCTTGCATTTCTTGT+TGG + chr3_1:67502240-67502259 None:intergenic 35.0%
TGCAAGAAGATGAAATGTTC+AGG - chr3_1:67502248-67502267 Msa0370070:CDS 35.0%
CACAAGAAAAAGGTTTCACT+TGG - chr3_1:67502356-67502375 Msa0370070:CDS 35.0%
AAGAAAAAGGTTTCACTTGG+TGG - chr3_1:67502359-67502378 Msa0370070:CDS 35.0%
TTCATTCAAAGGAGCTTTCA+TGG + chr3_1:67502420-67502439 None:intergenic 35.0%
ACAATCAGGACAAGAACAAA+TGG + chr3_1:67502621-67502640 None:intergenic 35.0%
ATTTGTTCTTGTCCTGATTG+TGG - chr3_1:67502620-67502639 Msa0370070:CDS 35.0%
TTCATAATCTCACCACAATC+AGG + chr3_1:67502635-67502654 None:intergenic 35.0%
TATATGTATTGAAGACACCG+AGG + chr3_1:67502946-67502965 None:intergenic 35.0%
TATTCTCTCGACTAAGAGTT+AGG - chr3_1:67503003-67503022 Msa0370070:intron 35.0%
! TCTTGGATACATTAATGGAC+CGG - chr3_1:67503036-67503055 Msa0370070:intron 35.0%
! GCATATATTAGTTTCTGAGC+TGG - chr3_1:67503166-67503185 Msa0370070:intron 35.0%
ATGTTCTTGCTTGTATCTTC+TGG + chr3_1:67503194-67503213 None:intergenic 35.0%
! TTATGGTTTTCTGTGTGTTG+TGG + chr3_1:67503292-67503311 None:intergenic 35.0%
GTACTCTTCGAATTTGGTTA+TGG + chr3_1:67503309-67503328 None:intergenic 35.0%
GTTTGTTCTTTAGGCCTAAA+CGG - chr3_1:67503428-67503447 Msa0370070:CDS 35.0%
!! AAACACGGGTTTAAGTTGAA+TGG - chr3_1:67503503-67503522 Msa0370070:CDS 35.0%
!! TTTAAGTTGAATGGTAGCGA+TGG - chr3_1:67503512-67503531 Msa0370070:CDS 35.0%
!! TTAAGTTGAATGGTAGCGAT+GGG - chr3_1:67503513-67503532 Msa0370070:CDS 35.0%
AAGCAAGGTAAAATAGCTCT+AGG + chr3_1:67503770-67503789 None:intergenic 35.0%
! TTCTTTGCAATGTCACTTGA+TGG - chr3_1:67503857-67503876 Msa0370070:CDS 35.0%
!!! TTAGTTCACTGGCGTTTTTT+AGG - chr3_1:67503924-67503943 Msa0370070:five_prime_UTR 35.0%
!!! TAGTTCACTGGCGTTTTTTA+GGG - chr3_1:67503925-67503944 Msa0370070:five_prime_UTR 35.0%
!!! GTGGCTTTTGGTTTTCCTTT+TGG + chr3_1:67502025-67502044 None:intergenic 40.0%
AAACAGAGAAACAACCCTCT+TGG - chr3_1:67502048-67502067 Msa0370070:exon 40.0%
AACAGAGAAACAACCCTCTT+GGG - chr3_1:67502049-67502068 Msa0370070:exon 40.0%
AATCCAACAACAACAGCAGA+AGG - chr3_1:67502109-67502128 Msa0370070:CDS 40.0%
! TTTTGTTCTGGTACAGGTTG+AGG + chr3_1:67502158-67502177 None:intergenic 40.0%
CAACAACACTGGAATGACAA+TGG - chr3_1:67502280-67502299 Msa0370070:CDS 40.0%
! TGGTGGATGCAAAAACAACT+TGG - chr3_1:67502376-67502395 Msa0370070:CDS 40.0%
GCTCCTTTGAATGAACTCAA+CGG - chr3_1:67502425-67502444 Msa0370070:CDS 40.0%
CTTCCGTTGAGTTCATTCAA+AGG + chr3_1:67502431-67502450 None:intergenic 40.0%
TGAAAGTGAAGACGAAGAAG+AGG + chr3_1:67502465-67502484 None:intergenic 40.0%
CTCTAGTGAAACCAAGAACA+GGG + chr3_1:67502580-67502599 None:intergenic 40.0%
TCTCTAGTGAAACCAAGAAC+AGG + chr3_1:67502581-67502600 None:intergenic 40.0%
TGACAGCTTGATGAAGTTCA+AGG + chr3_1:67502667-67502686 None:intergenic 40.0%
TTACGTCCTAACTCTCAGTT+GGG - chr3_1:67502909-67502928 Msa0370070:intron 40.0%
AATGTAACACAAGCGAGAAC+CGG + chr3_1:67503058-67503077 None:intergenic 40.0%
! TGTTGTGGACTTTAAGGATG+CGG + chr3_1:67503277-67503296 None:intergenic 40.0%
TCTGTGTGTTGTGGACTTTA+AGG + chr3_1:67503283-67503302 None:intergenic 40.0%
GTCTCTGTACTCTTCGAATT+TGG + chr3_1:67503315-67503334 None:intergenic 40.0%
GTGTGCGGCATAATAAAACA+CGG - chr3_1:67503488-67503507 Msa0370070:CDS 40.0%
TGTGCGGCATAATAAAACAC+GGG - chr3_1:67503489-67503508 Msa0370070:CDS 40.0%
! CGACAAAGCTAGTAGTGTTT+TGG - chr3_1:67503568-67503587 Msa0370070:CDS 40.0%
!! AGTAGTGTTTTGGACCTTTC+AGG - chr3_1:67503578-67503597 Msa0370070:CDS 40.0%
AGAGTGAAGAAGAACATGGA+AGG - chr3_1:67503656-67503675 Msa0370070:CDS 40.0%
GGAAGGTGGTAGTAATGTTA+TGG - chr3_1:67503673-67503692 Msa0370070:CDS 40.0%
TGCTGGGGCTTATTCTAATT+TGG - chr3_1:67503724-67503743 Msa0370070:CDS 40.0%
!!! AGTTCACTGGCGTTTTTTAG+GGG - chr3_1:67503926-67503945 Msa0370070:five_prime_UTR 40.0%
CTCACTCCCACTAAAATCAA+TGG - chr3_1:67503991-67504010 Msa0370070:five_prime_UTR 40.0%
!!! GTGGCTTTTGGTTTTCCTTT+TGG + chr3_1:67502025-67502044 None:intergenic 40.0%
AAACAGAGAAACAACCCTCT+TGG - chr3_1:67502048-67502067 Msa0370070:exon 40.0%
AACAGAGAAACAACCCTCTT+GGG - chr3_1:67502049-67502068 Msa0370070:exon 40.0%
AATCCAACAACAACAGCAGA+AGG - chr3_1:67502109-67502128 Msa0370070:CDS 40.0%
! TTTTGTTCTGGTACAGGTTG+AGG + chr3_1:67502158-67502177 None:intergenic 40.0%
CAACAACACTGGAATGACAA+TGG - chr3_1:67502280-67502299 Msa0370070:CDS 40.0%
! TGGTGGATGCAAAAACAACT+TGG - chr3_1:67502376-67502395 Msa0370070:CDS 40.0%
GCTCCTTTGAATGAACTCAA+CGG - chr3_1:67502425-67502444 Msa0370070:CDS 40.0%
CTTCCGTTGAGTTCATTCAA+AGG + chr3_1:67502431-67502450 None:intergenic 40.0%
TGAAAGTGAAGACGAAGAAG+AGG + chr3_1:67502465-67502484 None:intergenic 40.0%
CTCTAGTGAAACCAAGAACA+GGG + chr3_1:67502580-67502599 None:intergenic 40.0%
TCTCTAGTGAAACCAAGAAC+AGG + chr3_1:67502581-67502600 None:intergenic 40.0%
TGACAGCTTGATGAAGTTCA+AGG + chr3_1:67502667-67502686 None:intergenic 40.0%
TTACGTCCTAACTCTCAGTT+GGG - chr3_1:67502909-67502928 Msa0370070:intron 40.0%
AATGTAACACAAGCGAGAAC+CGG + chr3_1:67503058-67503077 None:intergenic 40.0%
! TGTTGTGGACTTTAAGGATG+CGG + chr3_1:67503277-67503296 None:intergenic 40.0%
TCTGTGTGTTGTGGACTTTA+AGG + chr3_1:67503283-67503302 None:intergenic 40.0%
GTCTCTGTACTCTTCGAATT+TGG + chr3_1:67503315-67503334 None:intergenic 40.0%
GTGTGCGGCATAATAAAACA+CGG - chr3_1:67503488-67503507 Msa0370070:CDS 40.0%
TGTGCGGCATAATAAAACAC+GGG - chr3_1:67503489-67503508 Msa0370070:CDS 40.0%
! CGACAAAGCTAGTAGTGTTT+TGG - chr3_1:67503568-67503587 Msa0370070:CDS 40.0%
!! AGTAGTGTTTTGGACCTTTC+AGG - chr3_1:67503578-67503597 Msa0370070:CDS 40.0%
AGAGTGAAGAAGAACATGGA+AGG - chr3_1:67503656-67503675 Msa0370070:CDS 40.0%
GGAAGGTGGTAGTAATGTTA+TGG - chr3_1:67503673-67503692 Msa0370070:CDS 40.0%
TGCTGGGGCTTATTCTAATT+TGG - chr3_1:67503724-67503743 Msa0370070:CDS 40.0%
!!! AGTTCACTGGCGTTTTTTAG+GGG - chr3_1:67503926-67503945 Msa0370070:five_prime_UTR 40.0%
CTCACTCCCACTAAAATCAA+TGG - chr3_1:67503991-67504010 Msa0370070:five_prime_UTR 40.0%
CTTCCTTCTGCTGTTGTTGT+TGG + chr3_1:67502115-67502134 None:intergenic 45.0%
!!! GGCTGTTTTTGTTCTGGTAC+AGG + chr3_1:67502164-67502183 None:intergenic 45.0%
!! GTTGCTGCTGTTGTTGTTTC+TGG + chr3_1:67502311-67502330 None:intergenic 45.0%
GCAGCATCTTCTAACTCTTC+TGG - chr3_1:67502485-67502504 Msa0370070:CDS 45.0%
!! TCTTCTAACTCTTCTGGAGC+TGG - chr3_1:67502491-67502510 Msa0370070:CDS 45.0%
!! TTCTGGAGCTGGTTCTTTCA+GGG - chr3_1:67502502-67502521 Msa0370070:CDS 45.0%
CTTTCAGGGGAATGCAGTTT+AGG - chr3_1:67502516-67502535 Msa0370070:CDS 45.0%
ATGCAGTTTAGGAGACTCTC+CGG - chr3_1:67502527-67502546 Msa0370070:CDS 45.0%
CATTCGACACTCGTAACAAC+CGG + chr3_1:67502549-67502568 None:intergenic 45.0%
ATGGTTGTTGACCCTGTTCT+TGG - chr3_1:67502566-67502585 Msa0370070:CDS 45.0%
CATCAAGCTGTCAAACATGC+AGG - chr3_1:67502674-67502693 Msa0370070:intron 45.0%
CAGCTCAGTCTCAGATACTT+TGG + chr3_1:67502761-67502780 None:intergenic 45.0%
GTTACGTCCTAACTCTCAGT+TGG - chr3_1:67502908-67502927 Msa0370070:intron 45.0%
TACGTCCTAACTCTCAGTTG+GGG - chr3_1:67502910-67502929 Msa0370070:intron 45.0%
TATCTCCCCAACTGAGAGTT+AGG + chr3_1:67502918-67502937 None:intergenic 45.0%
GTTGGGGAGATAATGAACCT+CGG - chr3_1:67502926-67502945 Msa0370070:intron 45.0%
GCTTCTTTAGCCAGCTTGAA+TGG + chr3_1:67503232-67503251 None:intergenic 45.0%
CAGACGGAAACGAGTTACTA+AGG - chr3_1:67503387-67503406 Msa0370070:CDS 45.0%
AGAGGTTTGAGGAACCGTTT+AGG + chr3_1:67503445-67503464 None:intergenic 45.0%
! TGTTGAGTTGCAGAGGTTTG+AGG + chr3_1:67503456-67503475 None:intergenic 45.0%
! ATTGGGATGTTGAGTTGCAG+AGG + chr3_1:67503463-67503482 None:intergenic 45.0%
ATATTGACGACAGCAACGAG+TGG - chr3_1:67503536-67503555 Msa0370070:CDS 45.0%
! TGAGAGTGGTGATGAGAAGA+GGG - chr3_1:67503604-67503623 Msa0370070:CDS 45.0%
TGATGAGAAGAGGGCAATGT+TGG - chr3_1:67503613-67503632 Msa0370070:CDS 45.0%
!! AGAGGGCAATGTTGGTTTGT+AGG - chr3_1:67503621-67503640 Msa0370070:CDS 45.0%
!! GAGGGCAATGTTGGTTTGTA+GGG - chr3_1:67503622-67503641 Msa0370070:CDS 45.0%
!! TTGGTTTGTAGGGTGATAGC+AGG - chr3_1:67503632-67503651 Msa0370070:CDS 45.0%
! TGGTTTGTAGGGTGATAGCA+GGG - chr3_1:67503633-67503652 Msa0370070:CDS 45.0%
AGGGAGAGTGAAGAAGAACA+TGG - chr3_1:67503652-67503671 Msa0370070:CDS 45.0%
GTGAAGAAGAACATGGAAGG+TGG - chr3_1:67503659-67503678 Msa0370070:CDS 45.0%
!! GAGTATGATTCGGTTAGTGC+TGG - chr3_1:67503698-67503717 Msa0370070:CDS 45.0%
CTTCCTTCTGCTGTTGTTGT+TGG + chr3_1:67502115-67502134 None:intergenic 45.0%
!!! GGCTGTTTTTGTTCTGGTAC+AGG + chr3_1:67502164-67502183 None:intergenic 45.0%
!! GTTGCTGCTGTTGTTGTTTC+TGG + chr3_1:67502311-67502330 None:intergenic 45.0%
GCAGCATCTTCTAACTCTTC+TGG - chr3_1:67502485-67502504 Msa0370070:CDS 45.0%
!! TCTTCTAACTCTTCTGGAGC+TGG - chr3_1:67502491-67502510 Msa0370070:CDS 45.0%
!! TTCTGGAGCTGGTTCTTTCA+GGG - chr3_1:67502502-67502521 Msa0370070:CDS 45.0%
CTTTCAGGGGAATGCAGTTT+AGG - chr3_1:67502516-67502535 Msa0370070:CDS 45.0%
ATGCAGTTTAGGAGACTCTC+CGG - chr3_1:67502527-67502546 Msa0370070:CDS 45.0%
CATTCGACACTCGTAACAAC+CGG + chr3_1:67502549-67502568 None:intergenic 45.0%
ATGGTTGTTGACCCTGTTCT+TGG - chr3_1:67502566-67502585 Msa0370070:CDS 45.0%
CATCAAGCTGTCAAACATGC+AGG - chr3_1:67502674-67502693 Msa0370070:intron 45.0%
CAGCTCAGTCTCAGATACTT+TGG + chr3_1:67502761-67502780 None:intergenic 45.0%
GTTACGTCCTAACTCTCAGT+TGG - chr3_1:67502908-67502927 Msa0370070:intron 45.0%
TACGTCCTAACTCTCAGTTG+GGG - chr3_1:67502910-67502929 Msa0370070:intron 45.0%
TATCTCCCCAACTGAGAGTT+AGG + chr3_1:67502918-67502937 None:intergenic 45.0%
GTTGGGGAGATAATGAACCT+CGG - chr3_1:67502926-67502945 Msa0370070:intron 45.0%
GCTTCTTTAGCCAGCTTGAA+TGG + chr3_1:67503232-67503251 None:intergenic 45.0%
CAGACGGAAACGAGTTACTA+AGG - chr3_1:67503387-67503406 Msa0370070:CDS 45.0%
AGAGGTTTGAGGAACCGTTT+AGG + chr3_1:67503445-67503464 None:intergenic 45.0%
! TGTTGAGTTGCAGAGGTTTG+AGG + chr3_1:67503456-67503475 None:intergenic 45.0%
! ATTGGGATGTTGAGTTGCAG+AGG + chr3_1:67503463-67503482 None:intergenic 45.0%
ATATTGACGACAGCAACGAG+TGG - chr3_1:67503536-67503555 Msa0370070:CDS 45.0%
! TGAGAGTGGTGATGAGAAGA+GGG - chr3_1:67503604-67503623 Msa0370070:CDS 45.0%
TGATGAGAAGAGGGCAATGT+TGG - chr3_1:67503613-67503632 Msa0370070:CDS 45.0%
!! AGAGGGCAATGTTGGTTTGT+AGG - chr3_1:67503621-67503640 Msa0370070:CDS 45.0%
!! GAGGGCAATGTTGGTTTGTA+GGG - chr3_1:67503622-67503641 Msa0370070:CDS 45.0%
!! TTGGTTTGTAGGGTGATAGC+AGG - chr3_1:67503632-67503651 Msa0370070:CDS 45.0%
! TGGTTTGTAGGGTGATAGCA+GGG - chr3_1:67503633-67503652 Msa0370070:CDS 45.0%
AGGGAGAGTGAAGAAGAACA+TGG - chr3_1:67503652-67503671 Msa0370070:CDS 45.0%
GTGAAGAAGAACATGGAAGG+TGG - chr3_1:67503659-67503678 Msa0370070:CDS 45.0%
!! GAGTATGATTCGGTTAGTGC+TGG - chr3_1:67503698-67503717 Msa0370070:CDS 45.0%
GTGTGAGTGGAGGCTCTTTA+TGG + chr3_1:67501829-67501848 None:intergenic 50.0%
AGAGAAACAACCCTCTTGGG+CGG - chr3_1:67502052-67502071 Msa0370070:exon 50.0%
GGTTCACTCTGCAACAACAC+TGG - chr3_1:67502269-67502288 Msa0370070:CDS 50.0%
!! CTTCTGGAGCTGGTTCTTTC+AGG - chr3_1:67502501-67502520 Msa0370070:CDS 50.0%
! TCTGGAGCTGGTTCTTTCAG+GGG - chr3_1:67502503-67502522 Msa0370070:CDS 50.0%
!! CGGTTGTTACGAGTGTCGAA+TGG - chr3_1:67502547-67502566 Msa0370070:CDS 50.0%
!! ATGCGGTCGATTTTGCAGAC+TGG + chr3_1:67503260-67503279 None:intergenic 50.0%
ACATCCCAATGCAACGTGTG+CGG - chr3_1:67503473-67503492 Msa0370070:CDS 50.0%
TATGCCGCACACGTTGCATT+GGG + chr3_1:67503480-67503499 None:intergenic 50.0%
TTATGCCGCACACGTTGCAT+TGG + chr3_1:67503481-67503500 None:intergenic 50.0%
!! GACCTTTCAGGTTGTGAGAG+TGG - chr3_1:67503590-67503609 Msa0370070:CDS 50.0%
CACCACTCTCACAACCTGAA+AGG + chr3_1:67503595-67503614 None:intergenic 50.0%
! GTGAGAGTGGTGATGAGAAG+AGG - chr3_1:67503603-67503622 Msa0370070:CDS 50.0%
GTGTGAGTGGAGGCTCTTTA+TGG + chr3_1:67501829-67501848 None:intergenic 50.0%
AGAGAAACAACCCTCTTGGG+CGG - chr3_1:67502052-67502071 Msa0370070:exon 50.0%
GGTTCACTCTGCAACAACAC+TGG - chr3_1:67502269-67502288 Msa0370070:CDS 50.0%
!! CTTCTGGAGCTGGTTCTTTC+AGG - chr3_1:67502501-67502520 Msa0370070:CDS 50.0%
! TCTGGAGCTGGTTCTTTCAG+GGG - chr3_1:67502503-67502522 Msa0370070:CDS 50.0%
!! CGGTTGTTACGAGTGTCGAA+TGG - chr3_1:67502547-67502566 Msa0370070:CDS 50.0%
!! ATGCGGTCGATTTTGCAGAC+TGG + chr3_1:67503260-67503279 None:intergenic 50.0%
ACATCCCAATGCAACGTGTG+CGG - chr3_1:67503473-67503492 Msa0370070:CDS 50.0%
TATGCCGCACACGTTGCATT+GGG + chr3_1:67503480-67503499 None:intergenic 50.0%
TTATGCCGCACACGTTGCAT+TGG + chr3_1:67503481-67503500 None:intergenic 50.0%
!! GACCTTTCAGGTTGTGAGAG+TGG - chr3_1:67503590-67503609 Msa0370070:CDS 50.0%
CACCACTCTCACAACCTGAA+AGG + chr3_1:67503595-67503614 None:intergenic 50.0%
! GTGAGAGTGGTGATGAGAAG+AGG - chr3_1:67503603-67503622 Msa0370070:CDS 50.0%
! TTGGGAGTTGGGAGTGTGAG+TGG + chr3_1:67501842-67501861 None:intergenic 55.0%
! GGCGGTGGTAAGAGGCTTTT+TGG - chr3_1:67502070-67502089 Msa0370070:CDS 55.0%
TTTCCGTCTGCTATGCAGCG+GGG + chr3_1:67503377-67503396 None:intergenic 55.0%
GTTTCCGTCTGCTATGCAGC+GGG + chr3_1:67503378-67503397 None:intergenic 55.0%
CGTTTCCGTCTGCTATGCAG+CGG + chr3_1:67503379-67503398 None:intergenic 55.0%
!! TCGGTTAGTGCTGGTGATGC+TGG - chr3_1:67503707-67503726 Msa0370070:CDS 55.0%
!! CGGTTAGTGCTGGTGATGCT+GGG - chr3_1:67503708-67503727 Msa0370070:CDS 55.0%
!! GGTTAGTGCTGGTGATGCTG+GGG - chr3_1:67503709-67503728 Msa0370070:CDS 55.0%
! TTGGGAGTTGGGAGTGTGAG+TGG + chr3_1:67501842-67501861 None:intergenic 55.0%
! GGCGGTGGTAAGAGGCTTTT+TGG - chr3_1:67502070-67502089 Msa0370070:CDS 55.0%
TTTCCGTCTGCTATGCAGCG+GGG + chr3_1:67503377-67503396 None:intergenic 55.0%
GTTTCCGTCTGCTATGCAGC+GGG + chr3_1:67503378-67503397 None:intergenic 55.0%
CGTTTCCGTCTGCTATGCAG+CGG + chr3_1:67503379-67503398 None:intergenic 55.0%
!! TCGGTTAGTGCTGGTGATGC+TGG - chr3_1:67503707-67503726 Msa0370070:CDS 55.0%
!! CGGTTAGTGCTGGTGATGCT+GGG - chr3_1:67503708-67503727 Msa0370070:CDS 55.0%
!! GGTTAGTGCTGGTGATGCTG+GGG - chr3_1:67503709-67503728 Msa0370070:CDS 55.0%
! GGAGTTGGGAGTGTGAGTGG+AGG + chr3_1:67501839-67501858 None:intergenic 60.0%
GAAACAACCCTCTTGGGCGG+TGG - chr3_1:67502055-67502074 Msa0370070:CDS 60.0%
CCTCTTACCACCGCCCAAGA+GGG + chr3_1:67502065-67502084 None:intergenic 60.0%
TTCCGTCTGCTATGCAGCGG+GGG + chr3_1:67503376-67503395 None:intergenic 60.0%
! GGAGTTGGGAGTGTGAGTGG+AGG + chr3_1:67501839-67501858 None:intergenic 60.0%
GAAACAACCCTCTTGGGCGG+TGG - chr3_1:67502055-67502074 Msa0370070:CDS 60.0%
CCTCTTACCACCGCCCAAGA+GGG + chr3_1:67502065-67502084 None:intergenic 60.0%
TTCCGTCTGCTATGCAGCGG+GGG + chr3_1:67503376-67503395 None:intergenic 60.0%
CCCTCTTGGGCGGTGGTAAG+AGG - chr3_1:67502062-67502081 Msa0370070:CDS 65.0%
GCCTCTTACCACCGCCCAAG+AGG + chr3_1:67502066-67502085 None:intergenic 65.0%
CACCCCCGCTGCATAGCAGA+CGG - chr3_1:67503371-67503390 Msa0370070:CDS 65.0%
CCCTCTTGGGCGGTGGTAAG+AGG - chr3_1:67502062-67502081 Msa0370070:CDS 65.0%
GCCTCTTACCACCGCCCAAG+AGG + chr3_1:67502066-67502085 None:intergenic 65.0%
CACCCCCGCTGCATAGCAGA+CGG - chr3_1:67503371-67503390 Msa0370070:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 67501801 67504066 67501801 ID=Msa0370070;Name=Msa0370070
chr3_1 mRNA 67501801 67504066 67501801 ID=Msa0370070-mRNA-1;Parent=Msa0370070;Name=Msa0370070-mRNA-1;_AED=0.02;_eAED=0.02;_QI=171|1|1|1|1|1|2|252|453
chr3_1 exon 67501801 67502690 67501801 ID=Msa0370070-mRNA-1:exon:13965;Parent=Msa0370070-mRNA-1
chr3_1 exon 67503172 67504066 67503172 ID=Msa0370070-mRNA-1:exon:13964;Parent=Msa0370070-mRNA-1
chr3_1 five_prime_UTR 67503896 67504066 67503896 ID=Msa0370070-mRNA-1:five_prime_utr;Parent=Msa0370070-mRNA-1
chr3_1 CDS 67503172 67503895 67503172 ID=Msa0370070-mRNA-1:cds;Parent=Msa0370070-mRNA-1
chr3_1 CDS 67502053 67502690 67502053 ID=Msa0370070-mRNA-1:cds;Parent=Msa0370070-mRNA-1
chr3_1 three_prime_UTR 67501801 67502052 67501801 ID=Msa0370070-mRNA-1:three_prime_utr;Parent=Msa0370070-mRNA-1
Gene Sequence

>Msa0370070

ATGAGCAAATCAAAAATCCAAAGAAAGGTTACCATTACAAATCATATAAGCCAAAAGGAAAACCAAAAGCCACAAAAAACAGAGAAACAACCCTCTTGGGCGGTGGTAAGAGGCTTTTTGGCTTGTAAGAATGTTCAAATCCAACAACAACAGCAGAAGGAAGCAAAACAGCTACAACAACAACCTCAACCTGTACCAGAACAAAAACAGCCAAAGAAAAAACAAGAACAAAGGAAGCTGAAAGAAGAAAGAGTCTCAGAAGATACCAACAAGAAATGCAAGAAGATGAAATGTTCAGGTTCACTCTGCAACAACACTGGAATGACAATGGCAAAACCAGAAACAACAACAGCAGCAACAACAACAAGAACAACTACAGATATTCACAAGAAAAAGGTTTCACTTGGTGGATGCAAAAACAACTTGGCTTCTAGTTCAAGCAGATCCATGAAAGCTCCTTTGAATGAACTCAACGGAAGAACTGTGTCAGCCTCTTCTTCGTCTTCACTTTCAGCAGCATCTTCTAACTCTTCTGGAGCTGGTTCTTTCAGGGGAATGCAGTTTAGGAGACTCTCCGGTTGTTACGAGTGTCGAATGGTTGTTGACCCTGTTCTTGGTTTCACTAGAGACTCTTCTCTAAGAAGCTCCATTTGTTCTTGTCCTGATTGTGGTGAGATTATGAAAACTGAAAGCCTTGAACTTCATCAAGCTGTCAAACATGCAGTTTCTGAGCTGGGTCCAGAAGATACAAGCAAGAACATAGTTGAAATAATATTCCATTCAAGCTGGCTAAAGAAGCAATCTCCAGTCTGCAAAATCGACCGCATCCTTAAAGTCCACAACACACAGAAAACCATAACCAAATTCGAAGAGTACAGAGACTCAATCAAAGCAAAAGCAACAAATCTCTCAAAAAAACACCCCCGCTGCATAGCAGACGGAAACGAGTTACTAAGGTTTCACTGCACAACATTTGTTTGTTCTTTAGGCCTAAACGGTTCCTCAAACCTCTGCAACTCAACATCCCAATGCAACGTGTGCGGCATAATAAAACACGGGTTTAAGTTGAATGGTAGCGATGGGATATTGACGACAGCAACGAGTGGTAAAGCACACGACAAAGCTAGTAGTGTTTTGGACCTTTCAGGTTGTGAGAGTGGTGATGAGAAGAGGGCAATGTTGGTTTGTAGGGTGATAGCAGGGAGAGTGAAGAAGAACATGGAAGGTGGTAGTAATGTTATGGAAGAGTATGATTCGGTTAGTGCTGGTGATGCTGGGGCTTATTCTAATTTGGATGAGTTGTATGTGAATAATCCTAGAGCTATTTTACCTTGCTTTGTTGTAATCTATAGAGGCTTTTGA
Protein sequence

>Msa0370070

MSKSKIQRKVTITNHISQKENQKPQKTEKQPSWAVVRGFLACKNVQIQQQQQKEAKQLQQQPQPVPEQKQPKKKQEQRKLKEERVSEDTNKKCKKMKCSGSLCNNTGMTMAKPETTTAATTTRTTTDIHKKKVSLGGCKNNLASSSSRSMKAPLNELNGRTVSASSSSSLSAASSNSSGAGSFRGMQFRRLSGCYECRMVVDPVLGFTRDSSLRSSICSCPDCGEIMKTESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNSTSQCNVCGIIKHGFKLNGSDGILTTATSGKAHDKASSVLDLSGCESGDEKRAMLVCRVIAGRVKKNMEGGSNVMEEYDSVSAGDAGAYSNLDELYVNNPRAILPCFVVIYRGF*