AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0370290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370290 MtrunA17_Chr3g0115271 98.482 593 9 0 14 606 1 593 0.0 1209
Msa0370290 MtrunA17_Chr5g0424931 45.009 551 250 14 32 571 19 527 1.52e-146 434
Msa0370290 MtrunA17_Chr5g0417281 40.917 567 260 14 29 575 8 519 2.64e-129 389
Msa0370290 MtrunA17_Chr2g0326761 43.705 556 285 14 28 567 7 550 2.76e-128 393
Msa0370290 MtrunA17_Chr4g0028971 47.321 448 216 9 29 461 9 451 3.53e-124 382
Msa0370290 MtrunA17_Chr1g0181211 41.837 588 285 18 29 586 24 584 2.67e-123 379
Msa0370290 MtrunA17_Chr7g0264171 42.748 524 249 16 28 514 27 536 8.10e-122 373
Msa0370290 MtrunA17_Chr1g0199681 43.432 472 199 13 29 461 91 533 2.68e-118 367
Msa0370290 MtrunA17_Chr1g0178011 37.222 540 221 12 20 552 3 431 3.99e-108 333
Msa0370290 MtrunA17_Chr5g0436761 40.305 459 218 9 23 473 3 413 2.17e-101 315
Msa0370290 MtrunA17_Chr2g0277461 35.986 553 240 15 24 569 5 450 3.38e-99 310
Msa0370290 MtrunA17_Chr2g0289221 44.722 360 143 8 22 373 10 321 2.04e-91 286
Msa0370290 MtrunA17_Chr5g0417211 44.693 358 147 9 22 373 2 314 6.99e-90 284
Msa0370290 MtrunA17_Chr7g0264161 43.917 337 147 7 42 373 2 301 4.02e-85 268
Msa0370290 MtrunA17_Chr5g0424741 33.569 566 247 19 29 521 9 518 6.85e-76 251
Msa0370290 MtrunA17_Chr2g0277531 39.607 356 150 14 29 373 17 318 1.37e-71 233
Msa0370290 MtrunA17_Chr5g0424801 36.082 388 182 11 29 404 9 342 3.68e-70 231
Msa0370290 MtrunA17_Chr5g0425261 36.772 378 177 10 29 394 9 336 3.21e-69 229
Msa0370290 MtrunA17_Chr2g0276781 38.462 390 199 8 29 412 20 374 1.49e-68 235
Msa0370290 MtrunA17_Chr2g0282961 35.222 406 215 6 18 412 39 407 1.87e-68 233
Msa0370290 MtrunA17_Chr8g0376771 37.965 403 199 7 20 410 11 374 4.85e-68 238
Msa0370290 MtrunA17_Chr2g0285461 37.845 399 206 6 20 410 11 375 3.67e-67 235
Msa0370290 MtrunA17_Chr4g0009751 37.340 391 198 9 30 412 17 368 2.42e-66 228
Msa0370290 MtrunA17_Chr1g0156321 37.817 394 187 10 28 408 39 387 1.93e-65 229
Msa0370290 MtrunA17_Chr3g0109391 37.436 390 202 6 29 410 23 378 6.22e-65 228
Msa0370290 MtrunA17_Chr4g0070181 37.203 379 191 5 28 397 19 359 7.55e-65 230
Msa0370290 MtrunA17_Chr5g0433301 37.179 390 203 6 29 410 21 376 3.09e-64 226
Msa0370290 MtrunA17_Chr8g0385791 34.419 430 220 10 32 438 59 449 4.72e-64 225
Msa0370290 MtrunA17_Chr7g0239061 35.294 442 236 15 29 458 11 414 2.93e-63 221
Msa0370290 MtrunA17_Chr2g0301251 35.979 378 195 5 29 397 20 359 2.97e-63 226
Msa0370290 MtrunA17_Chr8g0389081 38.462 377 191 7 24 393 24 366 3.12e-63 226
Msa0370290 MtrunA17_Chr4g0046371 35.678 398 200 9 32 412 38 396 1.37e-62 219
Msa0370290 MtrunA17_Chr2g0326281 35.891 404 192 11 32 408 56 419 1.23e-59 213
Msa0370290 MtrunA17_Chr4g0029671 34.091 396 213 7 32 412 54 416 6.22e-58 208
Msa0370290 MtrunA17_Chr8g0346711 36.061 391 204 11 29 412 26 377 1.79e-57 205
Msa0370290 MtrunA17_Chr5g0425661 48.515 202 96 4 24 220 29 227 4.54e-54 184
Msa0370290 MtrunA17_Chr8g0356211 28.846 260 148 6 138 397 2 224 2.94e-30 121
Msa0370290 MtrunA17_Chr5g0425651 40.625 128 59 4 288 406 2 121 2.97e-24 98.2
Msa0370290 MtrunA17_Chr5g0424791 39.865 148 77 4 81 226 14 151 8.73e-22 92.0
Msa0370290 MtrunA17_Chr5g0419861 41.379 116 57 5 69 177 11 122 4.17e-14 69.7
Msa0370290 MtrunA17_Chr1g0178071 35.294 136 75 5 118 249 65 191 1.52e-12 69.3
Msa0370290 MtrunA17_Chr8g0345771 36.364 110 65 2 125 230 167 275 1.81e-11 67.0
Msa0370290 MtrunA17_Chr4g0072581 68.182 44 14 0 200 243 5 48 3.42e-11 59.3
Msa0370290 MtrunA17_Chr5g0422501 33.051 118 71 3 110 220 217 333 7.26e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370290 AT1G77850.2 48.479 559 267 11 25 573 12 559 7.27e-165 484
Msa0370290 AT1G77850.1 48.479 559 267 11 25 573 12 559 7.60e-165 483
Msa0370290 AT4G30080.1 42.349 562 285 14 29 572 16 556 5.54e-122 376
Msa0370290 AT2G28350.2 46.813 455 208 10 28 458 6 450 1.69e-120 372
Msa0370290 AT2G28350.1 46.813 455 208 10 28 458 6 450 4.02e-120 372
Msa0370290 AT5G37020.2 37.255 408 207 9 29 424 19 389 5.38e-69 238
Msa0370290 AT5G37020.1 37.255 408 207 9 29 424 19 389 1.14e-68 238
Msa0370290 AT2G33860.1 33.696 460 246 7 32 471 54 474 1.84e-68 233
Msa0370290 AT1G30330.3 38.557 402 201 7 21 410 10 377 2.37e-68 239
Msa0370290 AT1G30330.2 38.557 402 201 7 21 410 10 377 2.37e-68 239
Msa0370290 AT1G30330.1 38.442 398 203 6 21 410 12 375 3.17e-68 239
Msa0370290 AT1G59750.4 36.856 388 202 9 32 412 22 373 9.44e-66 228
Msa0370290 AT1G59750.2 36.856 388 202 9 32 412 22 373 1.06e-65 227
Msa0370290 AT1G59750.1 36.856 388 202 9 32 412 22 373 1.14e-65 227
Msa0370290 AT1G59750.3 36.856 388 202 9 32 412 22 373 1.14e-65 227
Msa0370290 AT1G19220.1 36.631 374 190 5 29 393 20 355 2.79e-64 229
Msa0370290 AT4G23980.1 36.461 373 190 7 29 393 9 342 7.11e-64 222
Msa0370290 AT4G23980.2 36.461 373 190 7 29 393 9 342 8.15e-64 222
Msa0370290 AT2G46530.1 35.236 403 212 7 25 417 14 377 5.50e-63 219
Msa0370290 AT5G60450.2 35.782 422 218 11 25 430 34 418 9.29e-63 221
Msa0370290 AT2G46530.3 35.236 403 212 7 25 417 35 398 1.31e-62 218
Msa0370290 AT1G19850.2 36.456 395 190 10 29 408 40 388 4.07e-62 221
Msa0370290 AT1G19850.1 36.456 395 190 10 29 408 51 399 5.11e-62 221
Msa0370290 AT5G60450.1 36.145 415 212 11 32 430 65 442 6.06e-62 219
Msa0370290 AT3G61830.1 34.555 382 206 7 29 404 22 365 1.58e-60 212
Msa0370290 AT5G62000.2 33.411 431 223 10 32 438 61 451 7.82e-60 214
Msa0370290 AT5G62000.5 33.411 431 223 10 32 438 61 451 7.82e-60 214
Msa0370290 AT5G62000.3 33.411 431 223 10 32 438 61 451 7.82e-60 214
Msa0370290 AT5G62000.1 33.411 431 223 10 32 438 61 451 7.82e-60 214
Msa0370290 AT5G62000.4 33.411 431 223 10 32 438 61 451 8.64e-60 214
Msa0370290 AT1G35520.1 31.612 484 257 15 24 476 19 459 1.79e-57 203
Msa0370290 AT1G34410.1 31.866 477 249 17 32 476 27 459 3.62e-56 200
Msa0370290 AT1G34310.1 34.518 394 207 10 32 417 27 377 1.01e-55 199
Msa0370290 AT1G35240.1 34.351 393 205 11 32 415 27 375 3.41e-55 197
Msa0370290 AT1G34390.1 34.010 394 207 12 32 417 27 375 1.55e-53 193
Msa0370290 AT5G20730.2 45.161 217 106 3 29 236 21 233 4.99e-53 196
Msa0370290 AT5G20730.1 45.161 217 106 3 29 236 21 233 5.33e-53 196
Msa0370290 AT5G20730.3 45.161 217 106 3 29 236 21 233 5.81e-53 196
Msa0370290 AT1G35540.1 33.163 392 215 10 32 417 27 377 3.19e-52 189
Msa0370290 AT2G33860.2 34.659 352 184 5 130 471 2 317 8.56e-52 185
Msa0370290 AT5G37020.3 38.538 301 142 7 130 424 31 294 1.85e-50 186
Msa0370290 AT3G61830.2 34.347 329 177 6 77 404 24 314 1.49e-48 178
Msa0370290 AT1G34170.1 30.263 380 209 9 27 395 20 354 9.85e-46 169
Msa0370290 AT2G46530.2 35.135 296 148 6 127 417 34 290 2.99e-42 160
Msa0370290 AT1G34170.2 28.684 380 189 9 27 395 20 328 1.71e-39 151
Msa0370290 AT1G34170.3 28.684 380 189 9 27 395 20 328 7.01e-39 150
Msa0370290 ATMG00940.1 50.000 154 69 4 217 368 1 148 5.39e-38 138
Msa0370290 AT1G43950.1 38.725 204 111 7 32 229 27 222 1.63e-34 130
Msa0370290 AT3G61970.1 34.454 119 73 3 117 230 9 127 1.65e-12 68.9
Msa0370290 AT2G36080.3 37.273 110 65 2 125 230 33 142 2.72e-12 67.4
Msa0370290 AT2G36080.4 37.273 110 65 2 125 230 33 142 3.49e-12 65.5
Msa0370290 AT2G36080.2 37.273 110 65 2 125 230 33 142 3.49e-12 65.5
Msa0370290 AT2G36080.1 37.273 110 65 2 125 230 33 142 3.57e-12 67.0
Msa0370290 AT4G01500.1 36.719 128 59 5 126 237 32 153 1.50e-11 66.6
Msa0370290 AT2G46870.1 37.895 95 58 1 124 218 29 122 2.09e-11 65.9
Msa0370290 AT1G01030.1 33.613 119 73 2 116 229 42 159 2.53e-11 66.2
Msa0370290 AT1G01030.2 33.613 119 73 2 116 229 42 159 2.77e-11 65.9
Msa0370290 AT3G25730.1 34.314 102 63 2 130 227 183 284 9.56e-11 63.9

Find 202 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTGTTCAGAACTTTAT+TGG 0.164550 3_1:+67946619 Msa0370290:intron
CCTCAACTGTTGAGGCTATT+TGG 0.202921 3_1:-67946018 None:intergenic
CCTGTAACGTTTCAGCTATT+TGG 0.208521 3_1:+67945836 Msa0370290:CDS
GAAACTAAGTATGTAATATT+TGG 0.249464 3_1:+67946899 Msa0370290:three_prime_UTR
TCATTGTTCAGAACTTTATT+GGG 0.286084 3_1:+67946620 Msa0370290:intron
GCGATAGCTCGCCAGAGTTT+GGG 0.291734 3_1:-67943341 None:intergenic
TCTCAATTTGACCCCGCTAT+TGG 0.292420 3_1:+67946988 Msa0370290:three_prime_UTR
AAAAGGACTAGAGGGGTATC+TGG 0.298766 3_1:+67945458 Msa0370290:CDS
CAGGTTTCTGTTCCTGATCA+TGG 0.299946 3_1:+67944310 Msa0370290:CDS
GGCGATAGCTCGCCAGAGTT+TGG 0.304479 3_1:-67943342 None:intergenic
AAATCCCTACCGTCAATTCT+AGG 0.309414 3_1:+67943378 Msa0370290:CDS
TCCTCCGTTGGATTATAGTA+TGG 0.314074 3_1:+67943718 Msa0370290:CDS
CAGAGTAGTTTGCCTTCCTT+TGG 0.347823 3_1:+67945767 Msa0370290:CDS
GTTCCTAATCGAACTGGTTC+CGG 0.351693 3_1:+67943953 Msa0370290:CDS
TCCTGTGGCGGTTGCGGAGG+CGG 0.355058 3_1:+67944096 Msa0370290:CDS
CTGTTCCTGATCATGGTGCT+TGG 0.358718 3_1:+67944317 Msa0370290:CDS
GGTTGCGGAGGCGGCGGAAA+TGG 0.360152 3_1:+67944105 Msa0370290:CDS
TTTGTTTGTCTTATTGAAAC+CGG 0.362279 3_1:+67946869 Msa0370290:three_prime_UTR
TGATAACTTCCGTCTTTGTA+TGG 0.363524 3_1:+67945646 Msa0370290:CDS
TTGGAAGTTTGCAACACTTC+AGG 0.367022 3_1:-67945365 None:intergenic
TCCAGGACTACTTGGTTTCA+AGG 0.368052 3_1:+67944277 Msa0370290:CDS
TTGGTGACGGTGGTAGTACT+TGG 0.374158 3_1:-67943298 None:intergenic
TGGAGACTGATGATTCTTCC+AGG 0.375310 3_1:+67944260 Msa0370290:CDS
CCAAATAGCTGAAACGTTAC+AGG 0.375667 3_1:-67945836 None:intergenic
CTGCTGGCATGCAGGGAGCC+AGG 0.375982 3_1:+67945582 Msa0370290:CDS
ATACTTAGTTTCATTGTTCC+CGG 0.381218 3_1:-67946888 None:intergenic
TTTGGCAGCAACACAGTGCC+GGG 0.386977 3_1:+67945677 Msa0370290:CDS
CTTTGTATGGGTAACTCCTT+TGG 0.387691 3_1:+67945659 Msa0370290:CDS
TTGTTGATTACTGATGTTCA+TGG 0.389456 3_1:+67943758 Msa0370290:CDS
GTTTCAAGGTGTAGTGTCTC+AGG 0.398107 3_1:+67944291 Msa0370290:CDS
TTCTATATAAATCCAATAGC+GGG 0.403966 3_1:-67947000 None:intergenic
CTGGCTCCCTGCATGCCAGC+AGG 0.411242 3_1:-67945581 None:intergenic
GTGAACCCTGTGATAGAAAA+GGG 0.417152 3_1:-67945506 None:intergenic
CGCCGGCATTTGTTGACCAC+CGG 0.418386 3_1:+67943821 Msa0370290:CDS
AAATTGCTCGACAGGCTTGA+TGG 0.418640 3_1:+67945989 Msa0370290:CDS
AGCTGAAACGTTACAGGCCC+GGG 0.423670 3_1:-67945830 None:intergenic
ATGATTCTTCCAGGACTACT+TGG 0.424084 3_1:+67944269 Msa0370290:CDS
AGAAGAGGTGAGAGATTGTT+CGG 0.425048 3_1:-67943446 None:intergenic
CTGCCAAGGGCTGACCCACT+TGG 0.431622 3_1:-67945384 None:intergenic
CGATTCGTTCCTAATCGAAC+TGG 0.433820 3_1:+67943947 Msa0370290:CDS
CAAGTGGGTCAGCCCTTGGC+AGG 0.434174 3_1:+67945385 Msa0370290:CDS
CCACCGGAACCAGTTCGATT+AGG 0.434846 3_1:-67943956 None:intergenic
AAATCCGACCACCCCGCTCT+TGG 0.439994 3_1:-67944163 None:intergenic
GGCAAACTACTCTGGCTCTC+TGG 0.444672 3_1:-67945758 None:intergenic
GAAATGGCGGCTCAAGGGAT+GGG 0.448044 3_1:+67944121 Msa0370290:CDS
AGTACTTGGCGGTTCATGAT+TGG 0.452130 3_1:-67943284 None:intergenic
AACGCTAAGAAGCTTGTTGC+TGG 0.453003 3_1:+67943860 Msa0370290:CDS
CTAACCAACCATTGTACTCT+AGG 0.453897 3_1:-67946963 None:intergenic
AGTGAACCCTGTGATAGAAA+AGG 0.454541 3_1:-67945507 None:intergenic
AGGGATTTGCACGGCGGCGC+CGG 0.460272 3_1:-67943363 None:intergenic
CAAAGGAAGGCAAACTACTC+TGG 0.464413 3_1:-67945766 None:intergenic
TCCTGGAATGAGAATCAAAA+TGG 0.464829 3_1:+67944234 Msa0370290:CDS
GCGGCGGAAATGGCGGCTCA+AGG 0.466850 3_1:+67944115 Msa0370290:CDS
AAAGGACTAGAGGGGTATCT+GGG 0.471476 3_1:+67945459 Msa0370290:CDS
CGATCTGTGGAGTGAGAAGT+AGG 0.471915 3_1:+67944008 Msa0370290:CDS
CACAGGAGATGACAGCAGTA+AGG 0.472700 3_1:+67945913 Msa0370290:CDS
ACCATTTGAACCACTTTCAA+CGG 0.473718 3_1:-67945882 None:intergenic
GCCGCCTCCGCAACCGCCAC+AGG 0.474771 3_1:-67944097 None:intergenic
GTTGTCTCCTGTGGCGGTTG+CGG 0.475607 3_1:+67944090 Msa0370290:CDS
GGAAATGGCGGCTCAAGGGA+TGG 0.479427 3_1:+67944120 Msa0370290:CDS
CCATTTGAACCACTTTCAAC+GGG 0.480213 3_1:-67945881 None:intergenic
CTGATGTTCATGGTTTGACT+TGG 0.481505 3_1:+67943768 Msa0370290:CDS
CTTTGGCAGCAACACAGTGC+CGG 0.482301 3_1:+67945676 Msa0370290:CDS
CCCGTTGAAAGTGGTTCAAA+TGG 0.482554 3_1:+67945881 Msa0370290:CDS
CTTACTCAAAATTGCTCGAC+AGG 0.482573 3_1:+67945981 Msa0370290:CDS
AATCCCTACCGTCAATTCTA+GGG 0.484494 3_1:+67943379 Msa0370290:CDS
ATTGTTTCTGATAGATTACA+TGG 0.486179 3_1:+67945336 Msa0370290:intron
CCTCTCCAAGCACCATGATC+AGG 0.489733 3_1:-67944322 None:intergenic
ACCTTGAAACCAAGTAGTCC+TGG 0.491621 3_1:-67944278 None:intergenic
CGGCGGAAATGGCGGCTCAA+GGG 0.492687 3_1:+67944116 Msa0370290:CDS
GTTGTTTACTATCCAAGAGC+GGG 0.497509 3_1:+67944151 Msa0370290:CDS
GAAGTTATCACCTGGAAAGT+TGG 0.498091 3_1:-67945633 None:intergenic
TCTCATGGCATGAAGTTCAA+TGG 0.498753 3_1:+67946662 Msa0370290:three_prime_UTR
GAGACAGAGCAGAGAATGTA+GGG 0.503744 3_1:-67943479 None:intergenic
TGTGGCGGTTGCGGAGGCGG+CGG 0.505496 3_1:+67944099 Msa0370290:CDS
CTTCCAAGTGGGTCAGCCCT+TGG 0.507741 3_1:+67945381 Msa0370290:CDS
GGGTTCACTAATTCAACAAT+GGG 0.507819 3_1:+67945521 Msa0370290:CDS
ATGCACATAAGTAGCTGTAC+AGG 0.510612 3_1:+67946072 Msa0370290:three_prime_UTR
AGAGAAGCTGGTGGAAGAGA+AGG 0.511133 3_1:+67944042 Msa0370290:CDS
CTTGGTCCATGTGACCTTGA+GGG 0.511485 3_1:-67943412 None:intergenic
GGTGGATGATGAAGAGAAGC+TGG 0.513287 3_1:+67944030 Msa0370290:CDS
ACAGGAGATGACAGCAGTAA+GGG 0.514015 3_1:+67945914 Msa0370290:CDS
TGCGGAGGCGGCGGAAATGG+CGG 0.515796 3_1:+67944108 Msa0370290:CDS
GTGACGGTGGTAGTACTTGG+CGG 0.517034 3_1:-67943295 None:intergenic
GTCTCCTGTGGCGGTTGCGG+AGG 0.517862 3_1:+67944093 Msa0370290:CDS
ATGAGTGTTACTTGGTGTCC+TGG 0.519012 3_1:+67944217 Msa0370290:CDS
TAGCTGAAACGTTACAGGCC+CGG 0.521167 3_1:-67945831 None:intergenic
GGAGACAGAGCAGAGAATGT+AGG 0.522633 3_1:-67943480 None:intergenic
TAGGGACGAGAGAGAAGAAG+AGG 0.523309 3_1:-67943461 None:intergenic
CTGTTGAGGCTATTTGGCAC+TGG 0.523716 3_1:-67946012 None:intergenic
AAATGGCGGCTCAAGGGATG+GGG 0.524611 3_1:+67944122 Msa0370290:CDS
GAAAGAAGTTCCACCTGCCA+AGG 0.525099 3_1:-67945398 None:intergenic
GTGGGTCAGCCCTTGGCAGG+TGG 0.528173 3_1:+67945388 Msa0370290:CDS
TCTGATGCGAACAACGGTGG+TGG 0.529876 3_1:+67943659 Msa0370290:CDS
CTACTTCCCTCAAGGTCACA+TGG 0.532844 3_1:+67943406 Msa0370290:CDS
AACCGGTGGTCAACAAATGC+CGG 0.533689 3_1:-67943823 None:intergenic
AACTGCAACTCAATGAAACC+CGG 0.535247 3_1:+67945812 Msa0370290:CDS
ACAGAACAGCCCGTTGAAAG+TGG 0.538177 3_1:+67945872 Msa0370290:CDS
AACGGAAAATAGATCATGCC+TGG 0.538278 3_1:-67945600 None:intergenic
GATAACTTCCGTCTTTGTAT+GGG 0.539535 3_1:+67945647 Msa0370290:CDS
GAAAGCGGAGGTTGTGGATG+CGG 0.543290 3_1:+67944192 Msa0370290:CDS
CCCCATTGAAAAGGACTAGA+GGG 0.543634 3_1:+67945450 Msa0370290:CDS
TGTTGACCACCGGTTGGAGT+AGG 0.544509 3_1:+67943831 Msa0370290:CDS
ATAAGGACACTCACTTCAGA+TGG 0.545289 3_1:-67946713 None:intergenic
TGATGTTCATGGTTTGACTT+GGG 0.545373 3_1:+67943769 Msa0370290:CDS
AAACTCTGGCGAGCTATCGC+CGG 0.546085 3_1:+67943344 Msa0370290:CDS
ATGCGGCGATGAGTGTTACT+TGG 0.550397 3_1:+67944209 Msa0370290:CDS
CCACACTCAACCCCAAACTC+TGG 0.551845 3_1:+67943330 Msa0370290:CDS
TGTTCGGAAGTGAAGTAGCT+TGG 0.552094 3_1:-67943430 None:intergenic
GTTCACAAACCTACTCCAAC+CGG 0.553748 3_1:-67943840 None:intergenic
AGGGTTTACTACTTCCCTCA+AGG 0.555346 3_1:+67943398 Msa0370290:CDS
GTAGTAAACCCTAGAATTGA+CGG 0.555608 3_1:-67943387 None:intergenic
CGGCACTGTGTTGCTGCCAA+AGG 0.556216 3_1:-67945675 None:intergenic
GGCATTTGTTGACCACCGGT+TGG 0.557182 3_1:+67943825 Msa0370290:CDS
TTGTTTGTCTTATTGAAACC+GGG 0.560405 3_1:+67946870 Msa0370290:three_prime_UTR
CCGTCGTCAGCTTCAATCAC+CGG 0.562074 3_1:-67943599 None:intergenic
TGTGTTGAAAGCGGAGGTTG+TGG 0.562873 3_1:+67944186 Msa0370290:CDS
ATCAACAAATTCTGCAACGG+AGG 0.565435 3_1:-67943743 None:intergenic
CAAAGACGGAAGTTATCACC+TGG 0.565893 3_1:-67945641 None:intergenic
AATGCCGGCGCGGCGTTCCA+CGG 0.569609 3_1:-67943808 None:intergenic
AGGCATTAACAACCCTCTTG+AGG 0.570796 3_1:+67945952 Msa0370290:CDS
TTTACCGTGGAACGCCGCGC+CGG 0.571717 3_1:+67943804 Msa0370290:CDS
AGATTGTGTCTTCCGATCTG+TGG 0.572758 3_1:+67943995 Msa0370290:CDS
ATTTCCTAGAGTACAATGGT+TGG 0.573247 3_1:+67946959 Msa0370290:three_prime_UTR
ACTAGAGGTGCAATGTTCAT+CGG 0.573435 3_1:+67943908 Msa0370290:CDS
ACAAAATCTGTGCCAAAGGA+AGG 0.573965 3_1:-67945779 None:intergenic
AGGTACTTCTCCACGCAGAC+AGG 0.574972 3_1:+67946813 Msa0370290:intron
CCTGATCATGGTGCTTGGAG+AGG 0.575468 3_1:+67944322 Msa0370290:CDS
GGAAAGGGCGTATGAAGGGA+AGG 0.577013 3_1:-67945428 None:intergenic
CGACACATCGGAGCAACCAC+CGG 0.578459 3_1:-67943972 None:intergenic
AAACCCTAGAATTGACGGTA+GGG 0.578545 3_1:-67943382 None:intergenic
CCACCGTTGTTCGCATCAGA+AGG 0.582707 3_1:-67943656 None:intergenic
ATAAGAAGTAACGGAATCGA+AGG 0.582751 3_1:-67943230 None:intergenic
CCAGAGTTTGGGGTTGAGTG+TGG 0.583941 3_1:-67943330 None:intergenic
TCAAATGGTACTGTTAGCAC+AGG 0.585129 3_1:+67945896 Msa0370290:CDS
AACGTTGGCAGTTCTCACTC+TGG 0.586514 3_1:+67945725 Msa0370290:CDS
GCTTGGTCCATGTGACCTTG+AGG 0.587306 3_1:-67943413 None:intergenic
TTGAAGCTGACGACGGTGAG+AGG 0.587325 3_1:+67943606 Msa0370290:CDS
CGATAGCTCGCCAGAGTTTG+GGG 0.589326 3_1:-67943340 None:intergenic
GTATCTGGGGTGTTAACTGA+TGG 0.592887 3_1:+67945473 Msa0370290:CDS
GCTTCAATCACCGGAATCCG+TGG 0.594157 3_1:-67943590 None:intergenic
TTTCTATATAAATCCAATAG+CGG 0.598851 3_1:-67947001 None:intergenic
CCGAACAAAATCTGTGCCAA+AGG 0.598966 3_1:-67945783 None:intergenic
CCAAATAGCCTCAACAGTTG+AGG 0.599347 3_1:+67946018 Msa0370290:CDS
CTATCCAAGAGCGGGGTGGT+CGG 0.600104 3_1:+67944159 Msa0370290:CDS
AATGAGAATCAAAATGGCTG+TGG 0.607672 3_1:+67944240 Msa0370290:CDS
CCTAATCGAACTGGTTCCGG+TGG 0.607840 3_1:+67943956 Msa0370290:CDS
GGTTGAATGAAAATGAGTGA+GGG 0.612055 3_1:-67943263 None:intergenic
AGGGTTCACTAATTCAACAA+TGG 0.612370 3_1:+67945520 Msa0370290:CDS
ATCGAATCAGCACAAAACCT+CGG 0.612548 3_1:-67943692 None:intergenic
GTAATCAACAAATTCTGCAA+CGG 0.612614 3_1:-67943746 None:intergenic
GAGTAAGTCGAATCCTCAAG+AGG 0.613064 3_1:-67945965 None:intergenic
GTGCTTGGAGAGGTTCACCT+TGG 0.614825 3_1:+67944332 Msa0370290:CDS
CATACTGCAAGGTCAAAAGA+TGG 0.615276 3_1:-67946837 None:intergenic
AAGGACTAGAGGGGTATCTG+GGG 0.618552 3_1:+67945460 Msa0370290:CDS
GGGGAAGTTGTCTCCTGTGG+CGG 0.619158 3_1:+67944084 Msa0370290:CDS
CTACTTCTCACTCCACAGAT+CGG 0.620895 3_1:-67944007 None:intergenic
GGATGATGAAGAGAAGCTGG+TGG 0.622357 3_1:+67944033 Msa0370290:CDS
CATTGTTCAGAACTTTATTG+GGG 0.623018 3_1:+67946621 Msa0370290:intron
ACTGCAACTCAATGAAACCC+GGG 0.624047 3_1:+67945813 Msa0370290:CDS
TGGATCGGCGAGGAAATGAA+CGG 0.624554 3_1:-67943504 None:intergenic
TAATATTTCCTAGAGTACAA+TGG 0.626801 3_1:+67946955 Msa0370290:three_prime_UTR
TTGGCAGCAACACAGTGCCG+GGG 0.627502 3_1:+67945678 Msa0370290:CDS
TAAACCCTAGAATTGACGGT+AGG 0.628428 3_1:-67943383 None:intergenic
TTAACAGTGAAATCATTCAA+CGG 0.636083 3_1:-67943563 None:intergenic
AAGGGCTGCAACGAAACTGA+AGG 0.639246 3_1:+67945932 Msa0370290:CDS
TAAGGACACTCACTTCAGAT+GGG 0.641287 3_1:-67946712 None:intergenic
GAAGGGGAAGTTGTCTCCTG+TGG 0.644987 3_1:+67944081 Msa0370290:CDS
ATAGCACGCCTCAACTGTTG+AGG 0.645577 3_1:-67946026 None:intergenic
AGTAAGTCGAATCCTCAAGA+GGG 0.645578 3_1:-67945964 None:intergenic
TCTATATAAATCCAATAGCG+GGG 0.648813 3_1:-67946999 None:intergenic
AGGAGTTACCCATACAAAGA+CGG 0.649086 3_1:-67945655 None:intergenic
TGGTTGAATGAAAATGAGTG+AGG 0.649701 3_1:-67943264 None:intergenic
AAAGTACTGTAACTCAACAA+TGG 0.650302 3_1:-67945557 None:intergenic
GATCTGTGGAGTGAGAAGTA+GGG 0.650471 3_1:+67944009 Msa0370290:CDS
CCTTCTGATGCGAACAACGG+TGG 0.652015 3_1:+67943656 Msa0370290:CDS
TTGTTTCTGATAGATTACAT+GGG 0.652931 3_1:+67945337 Msa0370290:intron
AAAGAAGTTCCACCTGCCAA+GGG 0.653496 3_1:-67945397 None:intergenic
GAGTTTCGTCACATTTACCG+TGG 0.654474 3_1:+67943791 Msa0370290:CDS
AAAAGATGGTCCTGTCTGCG+TGG 0.657451 3_1:-67946823 None:intergenic
AAAGAAAACAGCATACTGCA+AGG 0.660360 3_1:-67946848 None:intergenic
GGGGTGTTAACTGATGGAGA+TGG 0.666346 3_1:+67945479 Msa0370290:CDS
TTGTTTACTATCCAAGAGCG+GGG 0.667644 3_1:+67944152 Msa0370290:CDS
TTTACTATCCAAGAGCGGGG+TGG 0.668015 3_1:+67944155 Msa0370290:CDS
GTGGTCAACAAATGCCGGCG+CGG 0.669526 3_1:-67943818 None:intergenic
ACTCCTTCTGATGCGAACAA+CGG 0.674390 3_1:+67943653 Msa0370290:CDS
AAGACACAATCTCGACACAT+CGG 0.674917 3_1:-67943984 None:intergenic
CACAAACCTACTCCAACCGG+TGG 0.675418 3_1:-67943837 None:intergenic
AGTTGTTTACTATCCAAGAG+CGG 0.676137 3_1:+67944150 Msa0370290:CDS
TGAACCCTGTGATAGAAAAG+GGG 0.678709 3_1:-67945505 None:intergenic
AGTGTTGCAAACTTCCAAGT+GGG 0.678749 3_1:+67945370 Msa0370290:CDS
CTGTGGAGTGAGAAGTAGGG+TGG 0.681702 3_1:+67944012 Msa0370290:CDS
CCCATTGAAAAGGACTAGAG+GGG 0.682404 3_1:+67945451 Msa0370290:CDS
GACGGTAGGGATTTGCACGG+CGG 0.684230 3_1:-67943369 None:intergenic
AAGTGTTGCAAACTTCCAAG+TGG 0.685015 3_1:+67945369 Msa0370290:CDS
GGATCCATACTATAATCCAA+CGG 0.690465 3_1:-67943722 None:intergenic
GAACGAATCGAACAGCACGA+CGG 0.693501 3_1:-67943934 None:intergenic
CATACATGAAGCATACGCCA+AGG 0.694470 3_1:-67944349 None:intergenic
ATTGACGGTAGGGATTTGCA+CGG 0.698687 3_1:-67943372 None:intergenic
CCGGTGATTGAAGCTGACGA+CGG 0.709175 3_1:+67943599 Msa0370290:CDS
TCCATACTATAATCCAACGG+AGG 0.710511 3_1:-67943719 None:intergenic
ATCGGCGAGGAAATGAACGG+CGG 0.745601 3_1:-67943501 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTGAATATATATTTGAT+TGG - chr3_1:67944569-67944588 None:intergenic 10.0%
!!! ATAATTTGATCATATTGATT+AGG + chr3_1:67944444-67944463 Msa0370290:intron 15.0%
!! AAATAGATTAAATATGAGTA+TGG + chr3_1:67944597-67944616 Msa0370290:intron 15.0%
!!! CTATCTAAAATAACTAAAAT+TGG + chr3_1:67945307-67945326 Msa0370290:intron 15.0%
!! AGTATTCTTCATAAAAACAA+CGG - chr3_1:67943891-67943910 None:intergenic 20.0%
!! AATAAAGATTCAAAAGAAAG+AGG - chr3_1:67944378-67944397 None:intergenic 20.0%
!! TGTGCGTTATATAATAATTA+TGG + chr3_1:67944412-67944431 Msa0370290:intron 20.0%
!! AATCTATCAGAAACAATAAA+TGG - chr3_1:67945333-67945352 None:intergenic 20.0%
!!! TTTTTTCCTTGAGTTTTATA+TGG + chr3_1:67946332-67946351 Msa0370290:intron 20.0%
!! GTCTAATACAAGAAAATAAA+TGG + chr3_1:67946587-67946606 Msa0370290:intron 20.0%
!! AAGTTCAATGGATAAAAAAA+AGG + chr3_1:67946674-67946693 Msa0370290:three_prime_UTR 20.0%
!! AGTTCAATGGATAAAAAAAA+GGG + chr3_1:67946675-67946694 Msa0370290:three_prime_UTR 20.0%
!! ATAAGATGTTCAACAATATA+AGG - chr3_1:67946733-67946752 None:intergenic 20.0%
!!! ATTAATTTTGTTGCTTACTT+TGG + chr3_1:67946777-67946796 Msa0370290:intron 20.0%
!!! TTAATTTTGTTGCTTACTTT+GGG + chr3_1:67946778-67946797 Msa0370290:intron 20.0%
!! GAAACTAAGTATGTAATATT+TGG + chr3_1:67946899-67946918 Msa0370290:three_prime_UTR 20.0%
!! TTTCTATATAAATCCAATAG+CGG - chr3_1:67947004-67947023 None:intergenic 20.0%
!! TTTTCGAACATAAGAAGTAA+CGG - chr3_1:67943242-67943261 None:intergenic 25.0%
! TTAACAGTGAAATCATTCAA+CGG - chr3_1:67943566-67943585 None:intergenic 25.0%
!! ATTTCACTGTTAATTTTCCA+CGG + chr3_1:67943573-67943592 Msa0370290:CDS 25.0%
!! GTTTTTATGAAGAATACTAG+AGG + chr3_1:67943893-67943912 Msa0370290:CDS 25.0%
!! AAACATGCATTTTATCTAGT+TGG + chr3_1:67944467-67944486 Msa0370290:intron 25.0%
!!! ACTTAATGTTGCTTTCAAAA+TGG + chr3_1:67944536-67944555 Msa0370290:intron 25.0%
!! TAAGGAAAAATCATTTTGCA+AGG + chr3_1:67944644-67944663 Msa0370290:intron 25.0%
! AATACTATATTTGCATGAAG+AGG + chr3_1:67944698-67944717 Msa0370290:intron 25.0%
! AGTGTTTATCATCTGTTTAA+AGG + chr3_1:67944750-67944769 Msa0370290:intron 25.0%
! CAACAAATCAAATGTTAACA+TGG - chr3_1:67944791-67944810 None:intergenic 25.0%
! TTTGTTGAATTCAGGAAATT+TGG + chr3_1:67944872-67944891 Msa0370290:intron 25.0%
!! TAGAACATAGAAGTGATTTT+AGG + chr3_1:67944908-67944927 Msa0370290:intron 25.0%
!! GTAAAATTTTGTGAAACCAA+TGG + chr3_1:67944935-67944954 Msa0370290:intron 25.0%
!! TGATTTTTCTATATCTGACT+TGG + chr3_1:67945161-67945180 Msa0370290:intron 25.0%
!!! ATTGTTTCTGATAGATTACA+TGG + chr3_1:67945336-67945355 Msa0370290:intron 25.0%
!!! TTGTTTCTGATAGATTACAT+GGG + chr3_1:67945337-67945356 Msa0370290:intron 25.0%
! AAAGTTGGAAAAACTTGAAA+CGG - chr3_1:67945621-67945640 None:intergenic 25.0%
!!! AGTGGATTAATTGATAACAT+AGG + chr3_1:67946304-67946323 Msa0370290:intron 25.0%
!! ATTAATTGATAACATAGGTC+TGG + chr3_1:67946309-67946328 Msa0370290:intron 25.0%
! AAAAGTAAATGAAAATGCAG+AGG + chr3_1:67946468-67946487 Msa0370290:intron 25.0%
! AAAGTAAATGAAAATGCAGA+GGG + chr3_1:67946469-67946488 Msa0370290:intron 25.0%
!!! AGTATTGATTTTCTGTTATG+GGG - chr3_1:67946511-67946530 None:intergenic 25.0%
!!! GAGTATTGATTTTCTGTTAT+GGG - chr3_1:67946512-67946531 None:intergenic 25.0%
! TTCATTGTTCAGAACTTTAT+TGG + chr3_1:67946619-67946638 Msa0370290:intron 25.0%
! TCATTGTTCAGAACTTTATT+GGG + chr3_1:67946620-67946639 Msa0370290:intron 25.0%
! GTTCAATGGATAAAAAAAAG+GGG + chr3_1:67946676-67946695 Msa0370290:three_prime_UTR 25.0%
! GCAACAAAATTAATTGAACA+TGG - chr3_1:67946771-67946790 None:intergenic 25.0%
!! TTTGTTTGTCTTATTGAAAC+CGG + chr3_1:67946869-67946888 Msa0370290:three_prime_UTR 25.0%
! TAATATTTCCTAGAGTACAA+TGG + chr3_1:67946955-67946974 Msa0370290:three_prime_UTR 25.0%
! TTCTATATAAATCCAATAGC+GGG - chr3_1:67947003-67947022 None:intergenic 25.0%
GTAATCAACAAATTCTGCAA+CGG - chr3_1:67943749-67943768 None:intergenic 30.0%
! TTGTTGATTACTGATGTTCA+TGG + chr3_1:67943758-67943777 Msa0370290:CDS 30.0%
TAAATATGAGTATGGAAGAG+TGG + chr3_1:67944605-67944624 Msa0370290:intron 30.0%
TTGAATTCAGGAAATTTGGT+TGG + chr3_1:67944876-67944895 Msa0370290:intron 30.0%
TGAATTCAGGAAATTTGGTT+GGG + chr3_1:67944877-67944896 Msa0370290:intron 30.0%
AAACCAATGGATACCATTAT+TGG + chr3_1:67944948-67944967 Msa0370290:intron 30.0%
AACCAATGGATACCATTATT+GGG + chr3_1:67944949-67944968 Msa0370290:intron 30.0%
AATCTCATAAGTCCCAATAA+TGG - chr3_1:67944964-67944983 None:intergenic 30.0%
AGGAAACGAAAAAACAATGA+AGG - chr3_1:67945027-67945046 None:intergenic 30.0%
AGACATAAGAAATCAAAAGC+AGG - chr3_1:67945198-67945217 None:intergenic 30.0%
!! GATTCTTCGTATCATTTTTG+TGG + chr3_1:67945218-67945237 Msa0370290:intron 30.0%
!! AAAGTACTGTAACTCAACAA+TGG - chr3_1:67945560-67945579 None:intergenic 30.0%
!! GTTGAAAAAGATTTTAACCC+CGG - chr3_1:67945698-67945717 None:intergenic 30.0%
!!! GGGGTTAAAATCTTTTTCAA+CGG + chr3_1:67945697-67945716 Msa0370290:CDS 30.0%
AGTGAATCAAAGTTCTCAAT+AGG + chr3_1:67946109-67946128 Msa0370290:intron 30.0%
GTGAATCAAAGTTCTCAATA+GGG + chr3_1:67946110-67946129 Msa0370290:intron 30.0%
!!! GGTATTTTTAGCTGTCTTAT+TGG + chr3_1:67946211-67946230 Msa0370290:intron 30.0%
GTTTGTTCTAATCAAGTGAT+GGG + chr3_1:67946253-67946272 Msa0370290:intron 30.0%
TCATGACCATATAAAACTCA+AGG - chr3_1:67946341-67946360 None:intergenic 30.0%
! CTTTCTGTCAATATTTTCCT+AGG - chr3_1:67946414-67946433 None:intergenic 30.0%
TTGACAGAAAGTAGAGAAAA+AGG + chr3_1:67946423-67946442 Msa0370290:intron 30.0%
TGACAGAAAGTAGAGAAAAA+GGG + chr3_1:67946424-67946443 Msa0370290:intron 30.0%
!!! CGAGTATTGATTTTCTGTTA+TGG - chr3_1:67946513-67946532 None:intergenic 30.0%
ATGAGTATTCTCATGTGAAT+AGG + chr3_1:67946545-67946564 Msa0370290:intron 30.0%
CATTGTTCAGAACTTTATTG+GGG + chr3_1:67946621-67946640 Msa0370290:intron 30.0%
! TTGTTTGTCTTATTGAAACC+GGG + chr3_1:67946870-67946889 Msa0370290:three_prime_UTR 30.0%
ATACTTAGTTTCATTGTTCC+CGG - chr3_1:67946891-67946910 None:intergenic 30.0%
TCTATATAAATCCAATAGCG+GGG - chr3_1:67947002-67947021 None:intergenic 30.0%
! ATAAGAAGTAACGGAATCGA+AGG - chr3_1:67943233-67943252 None:intergenic 35.0%
GGTTGAATGAAAATGAGTGA+GGG - chr3_1:67943266-67943285 None:intergenic 35.0%
TGGTTGAATGAAAATGAGTG+AGG - chr3_1:67943267-67943286 None:intergenic 35.0%
GTAGTAAACCCTAGAATTGA+CGG - chr3_1:67943390-67943409 None:intergenic 35.0%
AAGCTTAGCAAAAACCTCAT+CGG - chr3_1:67943534-67943553 None:intergenic 35.0%
! TGTTAATTTTCCACGGATTC+CGG + chr3_1:67943580-67943599 Msa0370290:CDS 35.0%
GGATCCATACTATAATCCAA+CGG - chr3_1:67943725-67943744 None:intergenic 35.0%
! TGATGTTCATGGTTTGACTT+GGG + chr3_1:67943769-67943788 Msa0370290:CDS 35.0%
AGTTGTTTACTATCCAAGAG+CGG + chr3_1:67944150-67944169 Msa0370290:CDS 35.0%
TCCTGGAATGAGAATCAAAA+TGG + chr3_1:67944234-67944253 Msa0370290:CDS 35.0%
AATGAGAATCAAAATGGCTG+TGG + chr3_1:67944240-67944259 Msa0370290:CDS 35.0%
! TTTGACTGAGAATGCTTTTG+TGG + chr3_1:67944497-67944516 Msa0370290:intron 35.0%
! GTTGCTTTCAAAATGGAATG+TGG + chr3_1:67944543-67944562 Msa0370290:intron 35.0%
TTTGCATGAAGAGGTTGAAA+TGG + chr3_1:67944707-67944726 Msa0370290:intron 35.0%
TTGCATGAAGAGGTTGAAAT+GGG + chr3_1:67944708-67944727 Msa0370290:intron 35.0%
TTGTTCAGTTGCTTCTGTTA+CGG + chr3_1:67944808-67944827 Msa0370290:intron 35.0%
TTCCTGAATTCAACAAAGCA+GGG - chr3_1:67944869-67944888 None:intergenic 35.0%
TTTCCTGAATTCAACAAAGC+AGG - chr3_1:67944870-67944889 None:intergenic 35.0%
!!! CGTTTCCTTTTTTTGACATC+TGG + chr3_1:67945039-67945058 Msa0370290:intron 35.0%
GCAATCCAGATGTCAAAAAA+AGG - chr3_1:67945047-67945066 None:intergenic 35.0%
AGGGTTCACTAATTCAACAA+TGG + chr3_1:67945520-67945539 Msa0370290:CDS 35.0%
GGGTTCACTAATTCAACAAT+GGG + chr3_1:67945521-67945540 Msa0370290:CDS 35.0%
! TCAAGTTTTTCCAACTTTCC+AGG + chr3_1:67945623-67945642 Msa0370290:CDS 35.0%
TGATAACTTCCGTCTTTGTA+TGG + chr3_1:67945646-67945665 Msa0370290:CDS 35.0%
GATAACTTCCGTCTTTGTAT+GGG + chr3_1:67945647-67945666 Msa0370290:CDS 35.0%
! TTTTCAACGGATCTAAACGT+TGG + chr3_1:67945710-67945729 Msa0370290:CDS 35.0%
ACCATTTGAACCACTTTCAA+CGG - chr3_1:67945885-67945904 None:intergenic 35.0%
! AGTAGTTTGTGTTAGCTCAA+TGG + chr3_1:67946190-67946209 Msa0370290:intron 35.0%
! TAGCTGTCTTATTGGAATGT+TGG + chr3_1:67946219-67946238 Msa0370290:intron 35.0%
! TTGGAATGTTGGCATGTTTT+AGG + chr3_1:67946230-67946249 Msa0370290:intron 35.0%
! TGGAATGTTGGCATGTTTTA+GGG + chr3_1:67946231-67946250 Msa0370290:intron 35.0%
! GGTTTGTTCTAATCAAGTGA+TGG + chr3_1:67946252-67946271 Msa0370290:intron 35.0%
TGTGCATATATTCTCACAAG+TGG + chr3_1:67946286-67946305 Msa0370290:intron 35.0%
TGATATATGATGCCTGTTTC+TGG + chr3_1:67946358-67946377 Msa0370290:intron 35.0%
AAAAAAGATGCAGCTTCTCA+TGG + chr3_1:67946647-67946666 Msa0370290:three_prime_UTR 35.0%
AAAGAAAACAGCATACTGCA+AGG - chr3_1:67946851-67946870 None:intergenic 35.0%
ATTTCCTAGAGTACAATGGT+TGG + chr3_1:67946959-67946978 Msa0370290:three_prime_UTR 35.0%
!!! TTGAGTGTGGTTGCGTTTTT+TGG - chr3_1:67943320-67943339 None:intergenic 40.0%
AAATCCCTACCGTCAATTCT+AGG + chr3_1:67943378-67943397 Msa0370290:CDS 40.0%
AATCCCTACCGTCAATTCTA+GGG + chr3_1:67943379-67943398 Msa0370290:CDS 40.0%
AAACCCTAGAATTGACGGTA+GGG - chr3_1:67943385-67943404 None:intergenic 40.0%
TAAACCCTAGAATTGACGGT+AGG - chr3_1:67943386-67943405 None:intergenic 40.0%
AGAAGAGGTGAGAGATTGTT+CGG - chr3_1:67943449-67943468 None:intergenic 40.0%
!!! AACCTCATCGGTTTTTGGAT+CGG - chr3_1:67943522-67943541 None:intergenic 40.0%
!!! GCAAAAACCTCATCGGTTTT+TGG - chr3_1:67943527-67943546 None:intergenic 40.0%
ATCGAATCAGCACAAAACCT+CGG - chr3_1:67943695-67943714 None:intergenic 40.0%
! TGATTCGATTTTTCCTCCGT+TGG + chr3_1:67943706-67943725 Msa0370290:CDS 40.0%
TCCTCCGTTGGATTATAGTA+TGG + chr3_1:67943718-67943737 Msa0370290:CDS 40.0%
TCCATACTATAATCCAACGG+AGG - chr3_1:67943722-67943741 None:intergenic 40.0%
ATCAACAAATTCTGCAACGG+AGG - chr3_1:67943746-67943765 None:intergenic 40.0%
CTGATGTTCATGGTTTGACT+TGG + chr3_1:67943768-67943787 Msa0370290:CDS 40.0%
! ACTAGAGGTGCAATGTTCAT+CGG + chr3_1:67943908-67943927 Msa0370290:CDS 40.0%
AAGACACAATCTCGACACAT+CGG - chr3_1:67943987-67944006 None:intergenic 40.0%
GTTGTTTACTATCCAAGAGC+GGG + chr3_1:67944151-67944170 Msa0370290:CDS 40.0%
TTGTTTACTATCCAAGAGCG+GGG + chr3_1:67944152-67944171 Msa0370290:CDS 40.0%
! GTCGGATTTTGTGTTGAAAG+CGG + chr3_1:67944177-67944196 Msa0370290:CDS 40.0%
!!! GCCATTTTGATTCTCATTCC+AGG - chr3_1:67944238-67944257 None:intergenic 40.0%
ATGATTCTTCCAGGACTACT+TGG + chr3_1:67944269-67944288 Msa0370290:CDS 40.0%
TGAAGAGGTTGAAATGGGTA+AGG + chr3_1:67944713-67944732 Msa0370290:intron 40.0%
! TACCCTGCTTTGTTGAATTC+AGG + chr3_1:67944864-67944883 Msa0370290:intron 40.0%
TTCAGGAAATTTGGTTGGGT+TGG + chr3_1:67944881-67944900 Msa0370290:intron 40.0%
GTCCCAATAATGGTATCCAT+TGG - chr3_1:67944954-67944973 None:intergenic 40.0%
TTGGAAGTTTGCAACACTTC+AGG - chr3_1:67945368-67945387 None:intergenic 40.0%
! AAGTGTTGCAAACTTCCAAG+TGG + chr3_1:67945369-67945388 Msa0370290:CDS 40.0%
AGTGTTGCAAACTTCCAAGT+GGG + chr3_1:67945370-67945389 Msa0370290:CDS 40.0%
TGAACCCTGTGATAGAAAAG+GGG - chr3_1:67945508-67945527 None:intergenic 40.0%
GTGAACCCTGTGATAGAAAA+GGG - chr3_1:67945509-67945528 None:intergenic 40.0%
AGTGAACCCTGTGATAGAAA+AGG - chr3_1:67945510-67945529 None:intergenic 40.0%
! AGTTACAGTACTTTTCCTGC+TGG + chr3_1:67945566-67945585 Msa0370290:CDS 40.0%
AACGGAAAATAGATCATGCC+TGG - chr3_1:67945603-67945622 None:intergenic 40.0%
GAAGTTATCACCTGGAAAGT+TGG - chr3_1:67945636-67945655 None:intergenic 40.0%
AGGAGTTACCCATACAAAGA+CGG - chr3_1:67945658-67945677 None:intergenic 40.0%
CTTTGTATGGGTAACTCCTT+TGG + chr3_1:67945659-67945678 Msa0370290:CDS 40.0%
ACAAAATCTGTGCCAAAGGA+AGG - chr3_1:67945782-67945801 None:intergenic 40.0%
! CCTTTGGCACAGATTTTGTT+CGG + chr3_1:67945783-67945802 Msa0370290:CDS 40.0%
AACTGCAACTCAATGAAACC+CGG + chr3_1:67945812-67945831 Msa0370290:CDS 40.0%
CCAAATAGCTGAAACGTTAC+AGG - chr3_1:67945839-67945858 None:intergenic 40.0%
CCTGTAACGTTTCAGCTATT+TGG + chr3_1:67945836-67945855 Msa0370290:CDS 40.0%
CCATTTGAACCACTTTCAAC+GGG - chr3_1:67945884-67945903 None:intergenic 40.0%
TCAAATGGTACTGTTAGCAC+AGG + chr3_1:67945896-67945915 Msa0370290:CDS 40.0%
AGTAAGTCGAATCCTCAAGA+GGG - chr3_1:67945967-67945986 None:intergenic 40.0%
CTTACTCAAAATTGCTCGAC+AGG + chr3_1:67945981-67946000 Msa0370290:CDS 40.0%
ATGCACATAAGTAGCTGTAC+AGG + chr3_1:67946072-67946091 Msa0370290:three_prime_UTR 40.0%
!!! TTTTGGTTTGCACCAGAAAC+AGG - chr3_1:67946373-67946392 None:intergenic 40.0%
!! GTGTTTTTGCTCTGTGGTTT+TGG - chr3_1:67946390-67946409 None:intergenic 40.0%
! TTTTCTGTTATGGGGTAGCA+GGG - chr3_1:67946503-67946522 None:intergenic 40.0%
! ATTTTCTGTTATGGGGTAGC+AGG - chr3_1:67946504-67946523 None:intergenic 40.0%
TCTCATGGCATGAAGTTCAA+TGG + chr3_1:67946662-67946681 Msa0370290:three_prime_UTR 40.0%
TAAGGACACTCACTTCAGAT+GGG - chr3_1:67946715-67946734 None:intergenic 40.0%
ATAAGGACACTCACTTCAGA+TGG - chr3_1:67946716-67946735 None:intergenic 40.0%
CATACTGCAAGGTCAAAAGA+TGG - chr3_1:67946840-67946859 None:intergenic 40.0%
CTAACCAACCATTGTACTCT+AGG - chr3_1:67946966-67946985 None:intergenic 40.0%
AGTACTTGGCGGTTCATGAT+TGG - chr3_1:67943287-67943306 None:intergenic 45.0%
!!! GTGGTTGCGTTTTTTGGTGA+CGG - chr3_1:67943314-67943333 None:intergenic 45.0%
ATTGACGGTAGGGATTTGCA+CGG - chr3_1:67943375-67943394 None:intergenic 45.0%
AGGGTTTACTACTTCCCTCA+AGG + chr3_1:67943398-67943417 Msa0370290:CDS 45.0%
TGTTCGGAAGTGAAGTAGCT+TGG - chr3_1:67943433-67943452 None:intergenic 45.0%
GAGACAGAGCAGAGAATGTA+GGG - chr3_1:67943482-67943501 None:intergenic 45.0%
ACTCCTTCTGATGCGAACAA+CGG + chr3_1:67943653-67943672 Msa0370290:CDS 45.0%
GAGTTTCGTCACATTTACCG+TGG + chr3_1:67943791-67943810 Msa0370290:CDS 45.0%
GTTCACAAACCTACTCCAAC+CGG - chr3_1:67943843-67943862 None:intergenic 45.0%
!! AACGCTAAGAAGCTTGTTGC+TGG + chr3_1:67943860-67943879 Msa0370290:CDS 45.0%
CGATTCGTTCCTAATCGAAC+TGG + chr3_1:67943947-67943966 Msa0370290:CDS 45.0%
! GTTCCTAATCGAACTGGTTC+CGG + chr3_1:67943953-67943972 Msa0370290:CDS 45.0%
AGATTGTGTCTTCCGATCTG+TGG + chr3_1:67943995-67944014 Msa0370290:CDS 45.0%
CTACTTCTCACTCCACAGAT+CGG - chr3_1:67944010-67944029 None:intergenic 45.0%
GATCTGTGGAGTGAGAAGTA+GGG + chr3_1:67944009-67944028 Msa0370290:CDS 45.0%
!!! TGGAAGAGAAGGCATTTTCG+AGG + chr3_1:67944053-67944072 Msa0370290:CDS 45.0%
! GGATTTTGTGTTGAAAGCGG+AGG + chr3_1:67944180-67944199 Msa0370290:CDS 45.0%
!! ATGAGTGTTACTTGGTGTCC+TGG + chr3_1:67944217-67944236 Msa0370290:CDS 45.0%
TGGAGACTGATGATTCTTCC+AGG + chr3_1:67944260-67944279 Msa0370290:CDS 45.0%
TCCAGGACTACTTGGTTTCA+AGG + chr3_1:67944277-67944296 Msa0370290:CDS 45.0%
ACCTTGAAACCAAGTAGTCC+TGG - chr3_1:67944281-67944300 None:intergenic 45.0%
GTTTCAAGGTGTAGTGTCTC+AGG + chr3_1:67944291-67944310 Msa0370290:CDS 45.0%
CAGGTTTCTGTTCCTGATCA+TGG + chr3_1:67944310-67944329 Msa0370290:CDS 45.0%
CATACATGAAGCATACGCCA+AGG - chr3_1:67944352-67944371 None:intergenic 45.0%
CTTGGCGTATGCTTCATGTA+TGG + chr3_1:67944350-67944369 Msa0370290:intron 45.0%
!! GGCTGTGGCATGTGTTTTTA+AGG + chr3_1:67944626-67944645 Msa0370290:intron 45.0%
AAAGAAGTTCCACCTGCCAA+GGG - chr3_1:67945400-67945419 None:intergenic 45.0%
! GTCCTTTTCAATGGGGGAAA+GGG - chr3_1:67945446-67945465 None:intergenic 45.0%
! AGTCCTTTTCAATGGGGGAA+AGG - chr3_1:67945447-67945466 None:intergenic 45.0%
! CCTCTAGTCCTTTTCAATGG+GGG - chr3_1:67945452-67945471 None:intergenic 45.0%
! CCCTCTAGTCCTTTTCAATG+GGG - chr3_1:67945453-67945472 None:intergenic 45.0%
CCCCATTGAAAAGGACTAGA+GGG + chr3_1:67945450-67945469 Msa0370290:CDS 45.0%
! CCCCTCTAGTCCTTTTCAAT+GGG - chr3_1:67945454-67945473 None:intergenic 45.0%
CCCATTGAAAAGGACTAGAG+GGG + chr3_1:67945451-67945470 Msa0370290:CDS 45.0%
! ACCCCTCTAGTCCTTTTCAA+TGG - chr3_1:67945455-67945474 None:intergenic 45.0%
!! AAAAGGACTAGAGGGGTATC+TGG + chr3_1:67945458-67945477 Msa0370290:CDS 45.0%
!! AAAGGACTAGAGGGGTATCT+GGG + chr3_1:67945459-67945478 Msa0370290:CDS 45.0%
! GTATCTGGGGTGTTAACTGA+TGG + chr3_1:67945473-67945492 Msa0370290:CDS 45.0%
! GAGACCCCTTTTCTATCACA+GGG + chr3_1:67945501-67945520 Msa0370290:CDS 45.0%
CAAAGACGGAAGTTATCACC+TGG - chr3_1:67945644-67945663 None:intergenic 45.0%
CAAAGGAAGGCAAACTACTC+TGG - chr3_1:67945769-67945788 None:intergenic 45.0%
! CAGAGTAGTTTGCCTTCCTT+TGG + chr3_1:67945767-67945786 Msa0370290:CDS 45.0%
CCGAACAAAATCTGTGCCAA+AGG - chr3_1:67945786-67945805 None:intergenic 45.0%
ACTGCAACTCAATGAAACCC+GGG + chr3_1:67945813-67945832 Msa0370290:CDS 45.0%
CCCGTTGAAAGTGGTTCAAA+TGG + chr3_1:67945881-67945900 Msa0370290:CDS 45.0%
ACAGGAGATGACAGCAGTAA+GGG + chr3_1:67945914-67945933 Msa0370290:CDS 45.0%
AGGCATTAACAACCCTCTTG+AGG + chr3_1:67945952-67945971 Msa0370290:CDS 45.0%
GAGTAAGTCGAATCCTCAAG+AGG - chr3_1:67945968-67945987 None:intergenic 45.0%
AAATTGCTCGACAGGCTTGA+TGG + chr3_1:67945989-67946008 Msa0370290:CDS 45.0%
CCTCAACTGTTGAGGCTATT+TGG - chr3_1:67946021-67946040 None:intergenic 45.0%
CCAAATAGCCTCAACAGTTG+AGG + chr3_1:67946018-67946037 Msa0370290:CDS 45.0%
!!! CTAGGAGTGTTTTTGCTCTG+TGG - chr3_1:67946396-67946415 None:intergenic 45.0%
CACAGAGCAAAAACACTCCT+AGG + chr3_1:67946394-67946413 Msa0370290:intron 45.0%
! ACTTTGGGTTCTTTCCATGC+AGG + chr3_1:67946793-67946812 Msa0370290:intron 45.0%
TCTCAATTTGACCCCGCTAT+TGG + chr3_1:67946988-67947007 Msa0370290:three_prime_UTR 45.0%
!! TTGGTGACGGTGGTAGTACT+TGG - chr3_1:67943301-67943320 None:intergenic 50.0%
!!! GTTGCGTTTTTTGGTGACGG+TGG - chr3_1:67943311-67943330 None:intergenic 50.0%
CTACTTCCCTCAAGGTCACA+TGG + chr3_1:67943406-67943425 Msa0370290:CDS 50.0%
CTTGGTCCATGTGACCTTGA+GGG - chr3_1:67943415-67943434 None:intergenic 50.0%
TAGGGACGAGAGAGAAGAAG+AGG - chr3_1:67943464-67943483 None:intergenic 50.0%
GGAGACAGAGCAGAGAATGT+AGG - chr3_1:67943483-67943502 None:intergenic 50.0%
TGGATCGGCGAGGAAATGAA+CGG - chr3_1:67943507-67943526 None:intergenic 50.0%
!!! GTGGTGGATTTTCTGTTCCG+AGG + chr3_1:67943675-67943694 Msa0370290:CDS 50.0%
AACCGGTGGTCAACAAATGC+CGG - chr3_1:67943826-67943845 None:intergenic 50.0%
GAACGAATCGAACAGCACGA+CGG - chr3_1:67943937-67943956 None:intergenic 50.0%
CGATCTGTGGAGTGAGAAGT+AGG + chr3_1:67944008-67944027 Msa0370290:CDS 50.0%
GGTGGATGATGAAGAGAAGC+TGG + chr3_1:67944030-67944049 Msa0370290:CDS 50.0%
GGATGATGAAGAGAAGCTGG+TGG + chr3_1:67944033-67944052 Msa0370290:CDS 50.0%
AGAGAAGCTGGTGGAAGAGA+AGG + chr3_1:67944042-67944061 Msa0370290:CDS 50.0%
!!! GAGAAGGCATTTTCGAGGCA+CGG + chr3_1:67944058-67944077 Msa0370290:CDS 50.0%
!!! AGAAGGCATTTTCGAGGCAC+GGG + chr3_1:67944059-67944078 Msa0370290:CDS 50.0%
TTTACTATCCAAGAGCGGGG+TGG + chr3_1:67944155-67944174 Msa0370290:CDS 50.0%
TGTGTTGAAAGCGGAGGTTG+TGG + chr3_1:67944186-67944205 Msa0370290:CDS 50.0%
! ATGCGGCGATGAGTGTTACT+TGG + chr3_1:67944209-67944228 Msa0370290:CDS 50.0%
CTGTTCCTGATCATGGTGCT+TGG + chr3_1:67944317-67944336 Msa0370290:CDS 50.0%
TGAGTATGGAAGAGTGGCTG+TGG + chr3_1:67944611-67944630 Msa0370290:intron 50.0%
GAAAGAAGTTCCACCTGCCA+AGG - chr3_1:67945401-67945420 None:intergenic 50.0%
CCCCCATTGAAAAGGACTAG+AGG + chr3_1:67945449-67945468 Msa0370290:CDS 50.0%
!! AAGGACTAGAGGGGTATCTG+GGG + chr3_1:67945460-67945479 Msa0370290:CDS 50.0%
! GGGGTGTTAACTGATGGAGA+TGG + chr3_1:67945479-67945498 Msa0370290:CDS 50.0%
! GGAGACCCCTTTTCTATCAC+AGG + chr3_1:67945500-67945519 Msa0370290:CDS 50.0%
! TACTTTTCCTGCTGGCATGC+AGG + chr3_1:67945574-67945593 Msa0370290:CDS 50.0%
! ACTTTTCCTGCTGGCATGCA+GGG + chr3_1:67945575-67945594 Msa0370290:CDS 50.0%
AACGTTGGCAGTTCTCACTC+TGG + chr3_1:67945725-67945744 Msa0370290:CDS 50.0%
TAGCTGAAACGTTACAGGCC+CGG - chr3_1:67945834-67945853 None:intergenic 50.0%
ACAGAACAGCCCGTTGAAAG+TGG + chr3_1:67945872-67945891 Msa0370290:CDS 50.0%
CACAGGAGATGACAGCAGTA+AGG + chr3_1:67945913-67945932 Msa0370290:CDS 50.0%
AAGGGCTGCAACGAAACTGA+AGG + chr3_1:67945932-67945951 Msa0370290:CDS 50.0%
CTGTTGAGGCTATTTGGCAC+TGG - chr3_1:67946015-67946034 None:intergenic 50.0%
ATAGCACGCCTCAACTGTTG+AGG - chr3_1:67946029-67946048 None:intergenic 50.0%
AAAAGATGGTCCTGTCTGCG+TGG - chr3_1:67946826-67946845 None:intergenic 50.0%
GTGACGGTGGTAGTACTTGG+CGG - chr3_1:67943298-67943317 None:intergenic 55.0%
! CCAGAGTTTGGGGTTGAGTG+TGG - chr3_1:67943333-67943352 None:intergenic 55.0%
CCACACTCAACCCCAAACTC+TGG + chr3_1:67943330-67943349 Msa0370290:CDS 55.0%
CGATAGCTCGCCAGAGTTTG+GGG - chr3_1:67943343-67943362 None:intergenic 55.0%
GCGATAGCTCGCCAGAGTTT+GGG - chr3_1:67943344-67943363 None:intergenic 55.0%
AAACTCTGGCGAGCTATCGC+CGG + chr3_1:67943344-67943363 Msa0370290:CDS 55.0%
GCTTGGTCCATGTGACCTTG+AGG - chr3_1:67943416-67943435 None:intergenic 55.0%
ATCGGCGAGGAAATGAACGG+CGG - chr3_1:67943504-67943523 None:intergenic 55.0%
!!! CATCGGTTTTTGGATCGGCG+AGG - chr3_1:67943517-67943536 None:intergenic 55.0%
CGCCGATCCAAAAACCGATG+AGG + chr3_1:67943517-67943536 Msa0370290:CDS 55.0%
GCTTCAATCACCGGAATCCG+TGG - chr3_1:67943593-67943612 None:intergenic 55.0%
CCGTCGTCAGCTTCAATCAC+CGG - chr3_1:67943602-67943621 None:intergenic 55.0%
CCGGTGATTGAAGCTGACGA+CGG + chr3_1:67943599-67943618 Msa0370290:CDS 55.0%
TTGAAGCTGACGACGGTGAG+AGG + chr3_1:67943606-67943625 Msa0370290:CDS 55.0%
CCACCGTTGTTCGCATCAGA+AGG - chr3_1:67943659-67943678 None:intergenic 55.0%
CCTTCTGATGCGAACAACGG+TGG + chr3_1:67943656-67943675 Msa0370290:CDS 55.0%
TCTGATGCGAACAACGGTGG+TGG + chr3_1:67943659-67943678 Msa0370290:CDS 55.0%
! GGCATTTGTTGACCACCGGT+TGG + chr3_1:67943825-67943844 Msa0370290:CDS 55.0%
! TGTTGACCACCGGTTGGAGT+AGG + chr3_1:67943831-67943850 Msa0370290:CDS 55.0%
CACAAACCTACTCCAACCGG+TGG - chr3_1:67943840-67943859 None:intergenic 55.0%
CCACCGGAACCAGTTCGATT+AGG - chr3_1:67943959-67943978 None:intergenic 55.0%
! CCTAATCGAACTGGTTCCGG+TGG + chr3_1:67943956-67943975 Msa0370290:CDS 55.0%
CTGTGGAGTGAGAAGTAGGG+TGG + chr3_1:67944012-67944031 Msa0370290:CDS 55.0%
!! GCATTTTCGAGGCACGGGAA+GGG + chr3_1:67944064-67944083 Msa0370290:CDS 55.0%
!! CATTTTCGAGGCACGGGAAG+GGG + chr3_1:67944065-67944084 Msa0370290:CDS 55.0%
GAAGGGGAAGTTGTCTCCTG+TGG + chr3_1:67944081-67944100 Msa0370290:CDS 55.0%
GAAATGGCGGCTCAAGGGAT+GGG + chr3_1:67944121-67944140 Msa0370290:CDS 55.0%
AAATGGCGGCTCAAGGGATG+GGG + chr3_1:67944122-67944141 Msa0370290:CDS 55.0%
GAAAGCGGAGGTTGTGGATG+CGG + chr3_1:67944192-67944211 Msa0370290:CDS 55.0%
CCTCTCCAAGCACCATGATC+AGG - chr3_1:67944325-67944344 None:intergenic 55.0%
CCTGATCATGGTGCTTGGAG+AGG + chr3_1:67944322-67944341 Msa0370290:CDS 55.0%
GTGCTTGGAGAGGTTCACCT+TGG + chr3_1:67944332-67944351 Msa0370290:CDS 55.0%
! GGAAAGGGCGTATGAAGGGA+AGG - chr3_1:67945431-67945450 None:intergenic 55.0%
! TGGGGGAAAGGGCGTATGAA+GGG - chr3_1:67945435-67945454 None:intergenic 55.0%
! ATGGGGGAAAGGGCGTATGA+AGG - chr3_1:67945436-67945455 None:intergenic 55.0%
CGCCCTTTCCCCCATTGAAA+AGG + chr3_1:67945441-67945460 Msa0370290:CDS 55.0%
CTTTGGCAGCAACACAGTGC+CGG + chr3_1:67945676-67945695 Msa0370290:CDS 55.0%
TTTGGCAGCAACACAGTGCC+GGG + chr3_1:67945677-67945696 Msa0370290:CDS 55.0%
!! GGCAAACTACTCTGGCTCTC+TGG - chr3_1:67945761-67945780 None:intergenic 55.0%
AGCTGAAACGTTACAGGCCC+GGG - chr3_1:67945833-67945852 None:intergenic 55.0%
!! TGCGTGGAGAAGTACCTGCA+TGG - chr3_1:67946810-67946829 None:intergenic 55.0%
AGGTACTTCTCCACGCAGAC+AGG + chr3_1:67946813-67946832 Msa0370290:intron 55.0%
GGCGATAGCTCGCCAGAGTT+TGG - chr3_1:67943345-67943364 None:intergenic 60.0%
GACGGTAGGGATTTGCACGG+CGG - chr3_1:67943372-67943391 None:intergenic 60.0%
GTGGTCAACAAATGCCGGCG+CGG - chr3_1:67943821-67943840 None:intergenic 60.0%
! CGCCGGCATTTGTTGACCAC+CGG + chr3_1:67943821-67943840 Msa0370290:CDS 60.0%
CGACACATCGGAGCAACCAC+CGG - chr3_1:67943975-67943994 None:intergenic 60.0%
!! GGCATTTTCGAGGCACGGGA+AGG + chr3_1:67944063-67944082 Msa0370290:CDS 60.0%
GGGGAAGTTGTCTCCTGTGG+CGG + chr3_1:67944084-67944103 Msa0370290:CDS 60.0%
GTTGTCTCCTGTGGCGGTTG+CGG + chr3_1:67944090-67944109 Msa0370290:CDS 60.0%
GGAAATGGCGGCTCAAGGGA+TGG + chr3_1:67944120-67944139 Msa0370290:CDS 60.0%
CTATCCAAGAGCGGGGTGGT+CGG + chr3_1:67944159-67944178 Msa0370290:CDS 60.0%
AAATCCGACCACCCCGCTCT+TGG - chr3_1:67944166-67944185 None:intergenic 60.0%
CTTCCAAGTGGGTCAGCCCT+TGG + chr3_1:67945381-67945400 Msa0370290:CDS 60.0%
! CGGCACTGTGTTGCTGCCAA+AGG - chr3_1:67945678-67945697 None:intergenic 60.0%
TTGGCAGCAACACAGTGCCG+GGG + chr3_1:67945678-67945697 Msa0370290:CDS 60.0%
TTTACCGTGGAACGCCGCGC+CGG + chr3_1:67943804-67943823 Msa0370290:CDS 65.0%
CGGCGGAAATGGCGGCTCAA+GGG + chr3_1:67944116-67944135 Msa0370290:CDS 65.0%
CTGCCAAGGGCTGACCCACT+TGG - chr3_1:67945387-67945406 None:intergenic 65.0%
CAAGTGGGTCAGCCCTTGGC+AGG + chr3_1:67945385-67945404 Msa0370290:CDS 65.0%
AGGGATTTGCACGGCGGCGC+CGG - chr3_1:67943366-67943385 None:intergenic 70.0%
AATGCCGGCGCGGCGTTCCA+CGG - chr3_1:67943811-67943830 None:intergenic 70.0%
GTCTCCTGTGGCGGTTGCGG+AGG + chr3_1:67944093-67944112 Msa0370290:CDS 70.0%
TCCTGTGGCGGTTGCGGAGG+CGG + chr3_1:67944096-67944115 Msa0370290:CDS 70.0%
GGTTGCGGAGGCGGCGGAAA+TGG + chr3_1:67944105-67944124 Msa0370290:CDS 70.0%
TGCGGAGGCGGCGGAAATGG+CGG + chr3_1:67944108-67944127 Msa0370290:CDS 70.0%
GCGGCGGAAATGGCGGCTCA+AGG + chr3_1:67944115-67944134 Msa0370290:CDS 70.0%
GTGGGTCAGCCCTTGGCAGG+TGG + chr3_1:67945388-67945407 Msa0370290:CDS 70.0%
CTGGCTCCCTGCATGCCAGC+AGG - chr3_1:67945584-67945603 None:intergenic 70.0%
CTGCTGGCATGCAGGGAGCC+AGG + chr3_1:67945582-67945601 Msa0370290:CDS 70.0%
TGTGGCGGTTGCGGAGGCGG+CGG + chr3_1:67944099-67944118 Msa0370290:CDS 75.0%
! GCCGCCTCCGCAACCGCCAC+AGG - chr3_1:67944100-67944119 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 67943178 67947068 67943178 ID=Msa0370290;Name=Msa0370290
chr3_1 mRNA 67943178 67947068 67943178 ID=Msa0370290-mRNA-1;Parent=Msa0370290;Name=Msa0370290-mRNA-1;_AED=0.03;_eAED=0.03;_QI=73|1|1|1|0.33|0.25|4|384|606
chr3_1 exon 67943178 67944366 67943178 ID=Msa0370290-mRNA-1:exon:14124;Parent=Msa0370290-mRNA-1
chr3_1 exon 67945350 67946093 67945350 ID=Msa0370290-mRNA-1:exon:14125;Parent=Msa0370290-mRNA-1
chr3_1 exon 67946631 67946721 67946631 ID=Msa0370290-mRNA-1:exon:14126;Parent=Msa0370290-mRNA-1
chr3_1 exon 67946815 67947068 67946815 ID=Msa0370290-mRNA-1:exon:14127;Parent=Msa0370290-mRNA-1
chr3_1 five_prime_UTR 67943178 67943250 67943178 ID=Msa0370290-mRNA-1:five_prime_utr;Parent=Msa0370290-mRNA-1
chr3_1 CDS 67943251 67944366 67943251 ID=Msa0370290-mRNA-1:cds;Parent=Msa0370290-mRNA-1
chr3_1 CDS 67945350 67946054 67945350 ID=Msa0370290-mRNA-1:cds;Parent=Msa0370290-mRNA-1
chr3_1 three_prime_UTR 67946055 67946093 67946055 ID=Msa0370290-mRNA-1:three_prime_utr;Parent=Msa0370290-mRNA-1
chr3_1 three_prime_UTR 67946631 67946721 67946631 ID=Msa0370290-mRNA-1:three_prime_utr;Parent=Msa0370290-mRNA-1
chr3_1 three_prime_UTR 67946815 67947068 67946815 ID=Msa0370290-mRNA-1:three_prime_utr;Parent=Msa0370290-mRNA-1
Gene Sequence

>Msa0370290

ATGTTCGAAAAACCCTCACTCATTTTCATTCAACCAATCATGAACCGCCAAGTACTACCACCGTCACCAAAAAACGCAACCACACTCAACCCCAAACTCTGGCGAGCTATCGCCGGCGCCGCCGTGCAAATCCCTACCGTCAATTCTAGGGTTTACTACTTCCCTCAAGGTCACATGGACCAAGCTACTTCACTTCCGAACAATCTCTCACCTCTTCTTCTCTCTCGTCCCTACATTCTCTGCTCTGTCTCCGCCGTTCATTTCCTCGCCGATCCAAAAACCGATGAGGTTTTTGCTAAGCTTTTTCTTCAACCGTTGAATGATTTCACTGTTAATTTTCCACGGATTCCGGTGATTGAAGCTGACGACGGTGAGAGGATTTCTTCGTTTGCGAAGATTCTTACTCCTTCTGATGCGAACAACGGTGGTGGATTTTCTGTTCCGAGGTTTTGTGCTGATTCGATTTTTCCTCCGTTGGATTATAGTATGGATCCTCCGTTGCAGAATTTGTTGATTACTGATGTTCATGGTTTGACTTGGGAGTTTCGTCACATTTACCGTGGAACGCCGCGCCGGCATTTGTTGACCACCGGTTGGAGTAGGTTTGTGAACGCTAAGAAGCTTGTTGCTGGTGATTCCGTTGTTTTTATGAAGAATACTAGAGGTGCAATGTTCATCGGAATCCGTCGTGCTGTTCGATTCGTTCCTAATCGAACTGGTTCCGGTGGTTGCTCCGATGTGTCGAGATTGTGTCTTCCGATCTGTGGAGTGAGAAGTAGGGTGGATGATGAAGAGAAGCTGGTGGAAGAGAAGGCATTTTCGAGGCACGGGAAGGGGAAGTTGTCTCCTGTGGCGGTTGCGGAGGCGGCGGAAATGGCGGCTCAAGGGATGGGGTTTGAAGTTGTTTACTATCCAAGAGCGGGGTGGTCGGATTTTGTGTTGAAAGCGGAGGTTGTGGATGCGGCGATGAGTGTTACTTGGTGTCCTGGAATGAGAATCAAAATGGCTGTGGAGACTGATGATTCTTCCAGGACTACTTGGTTTCAAGGTGTAGTGTCTCAGGTTTCTGTTCCTGATCATGGTGCTTGGAGAGGTTCACCTTGGCGTATGCTTCATATTACATGGGACGAACCTGAAGTGTTGCAAACTTCCAAGTGGGTCAGCCCTTGGCAGGTGGAACTTCTTTCTACTACACCTTCCCTTCATACGCCCTTTCCCCCATTGAAAAGGACTAGAGGGGTATCTGGGGTGTTAACTGATGGAGATGGAGACCCCTTTTCTATCACAGGGTTCACTAATTCAACAATGGGACAATTGAATCAACCATTGTTGAGTTACAGTACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATCTATTTTCCGTTTCAAGTTTTTCCAACTTTCCAGGTGATAACTTCCGTCTTTGTATGGGTAACTCCTTTGGCAGCAACACAGTGCCGGGGTTAAAATCTTTTTCAACGGATCTAAACGTTGGCAGTTCTCACTCTGGTGATTTTTCACCAGAGAGCCAGAGTAGTTTGCCTTCCTTTGGCACAGATTTTGTTCGGAACTACAACTGCAACTCAATGAAACCCGGGCCTGTAACGTTTCAGCTATTTGGTGCAGTCATTCAGACAGAACAGCCCGTTGAAAGTGGTTCAAATGGTACTGTTAGCACAGGAGATGACAGCAGTAAGGGCTGCAACGAAACTGAAGGCATTAACAACCCTCTTGAGGATTCGACTTACTCAAAATTGCTCGACAGGCTTGATGGCCAGTGCCAAATAGCCTCAACAGTTGAGGCGTGCTATCTGTGA
Protein sequence

>Msa0370290

MFEKPSLIFIQPIMNRQVLPPSPKNATTLNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQATSLPNNLSPLLLSRPYILCSVSAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEADDGERISSFAKILTPSDANNGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSRFVNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTGSGGCSDVSRLCLPICGVRSRVDDEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLKAEVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAWRGSPWRMLHITWDEPEVLQTSKWVSPWQVELLSTTPSLHTPFPPLKRTRGVSGVLTDGDGDPFSITGFTNSTMGQLNQPLLSYSTFPAGMQGARHDLFSVSSFSNFPGDNFRLCMGNSFGSNTVPGLKSFSTDLNVGSSHSGDFSPESQSSLPSFGTDFVRNYNCNSMKPGPVTFQLFGAVIQTEQPVESGSNGTVSTGDDSSKGCNETEGINNPLEDSTYSKLLDRLDGQCQIASTVEACYL*