AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0370910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370910 MtrunA17_Chr3g0116641 93.342 751 34 2 62 796 1 751 0.0 1417
Msa0370910 MtrunA17_Chr1g0173521 47.661 791 360 8 22 783 16 781 0.0 717
Msa0370910 MtrunA17_Chr5g0447201 47.004 751 362 9 62 783 1 744 0.0 701
Msa0370910 MtrunA17_Chr4g0064311 44.667 750 360 11 62 784 98 819 0.0 647
Msa0370910 MtrunA17_Chr7g0257731 49.333 600 260 6 225 783 2 598 0.0 584
Msa0370910 MtrunA17_Chr3g0117141 36.696 793 418 17 60 796 22 786 2.84e-172 516
Msa0370910 MtrunA17_Chr6g0449521 37.931 754 390 18 70 772 37 763 9.97e-166 499
Msa0370910 MtrunA17_Chr4g0058701 35.467 781 426 16 69 796 23 778 9.67e-164 493
Msa0370910 MtrunA17_Chr1g0201161 32.707 639 319 13 84 633 58 674 1.69e-100 332
Msa0370910 MtrunA17_Chr1g0201161 28.856 201 104 8 624 796 734 923 7.59e-13 72.4
Msa0370910 MtrunA17_Chr7g0267991 37.584 447 239 9 367 783 407 843 6.60e-86 291
Msa0370910 MtrunA17_Chr7g0267991 34.221 263 149 3 84 340 54 298 1.58e-40 160
Msa0370910 MtrunA17_Chr8g0380141 36.567 402 225 9 295 670 312 709 9.86e-72 249
Msa0370910 MtrunA17_Chr8g0380141 33.083 266 148 4 84 340 53 297 2.33e-40 159
Msa0370910 MtrunA17_Chr7g0270181 35.260 346 197 5 455 778 4 344 8.58e-60 207
Msa0370910 MtrunA17_Chr5g0427081 44.521 146 60 4 571 697 7 150 3.35e-31 120
Msa0370910 MtrunA17_Chr7g0257741 38.961 154 80 2 62 211 1 144 5.72e-30 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370910 AT3G57520.1 49.155 769 332 10 62 783 1 757 0.0 775
Msa0370910 AT3G57520.2 50.901 666 290 8 62 702 1 654 0.0 709
Msa0370910 AT1G55740.1 47.936 751 350 9 62 783 1 739 0.0 676
Msa0370910 AT3G57520.3 53.710 566 245 5 62 622 1 554 0.0 649
Msa0370910 AT5G20250.3 44.400 750 373 12 62 784 1 733 0.0 634
Msa0370910 AT5G20250.1 44.400 750 373 12 62 784 1 733 0.0 634
Msa0370910 AT5G20250.4 44.341 751 374 12 61 784 95 828 0.0 634
Msa0370910 AT5G20250.2 44.400 750 373 12 62 784 1 733 0.0 634
Msa0370910 AT5G40390.1 37.404 778 420 16 69 796 23 783 4.33e-171 513
Msa0370910 AT4G01970.1 35.683 454 250 12 363 781 412 858 3.08e-80 276
Msa0370910 AT4G01970.1 35.211 284 142 4 82 341 49 314 5.67e-44 171
Msa0370910 AT4G01970.2 35.683 454 250 12 363 781 459 905 6.10e-80 276
Msa0370910 AT4G01970.2 35.211 284 142 4 82 341 96 361 6.00e-44 171

Find 182 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACAGTCTGCTGAAAATT+TGG 0.133304 3_1:+68842727 Msa0370910:intron
CTAATGTTTCTATCAAATTT+TGG 0.150455 3_1:-68841733 None:intergenic
GAGTCTTTGATTAGCTTAAA+TGG 0.186340 3_1:-68840685 None:intergenic
CCGACACACTTAACCATTTC+AGG 0.207056 3_1:+68842834 Msa0370910:CDS
GCCTTCACCATCAAGTTTAA+TGG 0.214336 3_1:-68843667 None:intergenic
AATGAAGTTGAGAATGTTAA+AGG 0.234661 3_1:-68839792 None:intergenic
TTTCTGTCATCTTGAAAATA+AGG 0.241361 3_1:+68840834 Msa0370910:CDS
AAGAAGGTTGGTTAATTTAT+AGG 0.254326 3_1:-68839709 None:intergenic
ACAACTCTGATTCAATTTAC+AGG 0.265456 3_1:+68841864 Msa0370910:CDS
GCATGCTTTAGCTGGTTATT+GGG 0.271441 3_1:+68841490 Msa0370910:CDS
CCGGTACATCTTGATTTGTT+TGG 0.294036 3_1:+68840862 Msa0370910:CDS
CATATGTATAAACAGGTATT+TGG 0.294074 3_1:+68843420 Msa0370910:intron
GGCATGCTTTAGCTGGTTAT+TGG 0.294226 3_1:+68841489 Msa0370910:CDS
GGCAGAGGATGTGGCCGATT+TGG 0.301018 3_1:+68843558 Msa0370910:CDS
AGAAGGTTGGTTAATTTATA+GGG 0.301460 3_1:-68839708 None:intergenic
TTTCTAATGACATAGGATAT+TGG 0.311195 3_1:+68840795 Msa0370910:intron
GTTGTTTCACCTGTTTCTGC+TGG 0.312030 3_1:+68839957 Msa0370910:CDS
CTTTATTTAGAGTCAAAATA+TGG 0.313807 3_1:+68840255 Msa0370910:CDS
GTCTACAAACATGACTATTT+CGG 0.314200 3_1:+68839860 Msa0370910:CDS
TACTGGGTTCCTTCAATTAT+CGG 0.317199 3_1:-68841152 None:intergenic
ATCCAGTAATGGATGGTAAA+AGG 0.326549 3_1:+68842617 Msa0370910:CDS
AACAAGGCTGATAGACATTA+AGG 0.327395 3_1:+68841263 Msa0370910:CDS
GAGGCAGTGTTTGTAAATTC+AGG 0.331115 3_1:+68840655 Msa0370910:CDS
CAAAATTTGATAGAAACATT+AGG 0.332651 3_1:+68841734 Msa0370910:CDS
TTGATAGAAACATTAGGTTC+AGG 0.347566 3_1:+68841740 Msa0370910:CDS
TTGCTTGACATGTACAATTC+AGG 0.347876 3_1:+68843471 Msa0370910:CDS
CATATGCAATTTGCGCCAAT+TGG 0.348061 3_1:+68843447 Msa0370910:CDS
GTGGTTTCCGATGGTTTCAT+TGG 0.349098 3_1:-68842810 None:intergenic
AAAGGATAGTTGAATTTGTT+AGG 0.360007 3_1:-68839774 None:intergenic
TATATACAGTATCTCCAATC+AGG 0.361816 3_1:+68843309 Msa0370910:CDS
ACAAGAATCGACTTTCGCTT+TGG 0.388023 3_1:-68843736 None:intergenic
TAATCCATCTTCAGAGTTGT+AGG 0.389057 3_1:-68843640 None:intergenic
AACCACTTTCAACGCAGAAT+TGG 0.394094 3_1:-68840490 None:intergenic
GAGAGATATTTGTGCCAGAC+TGG 0.399133 3_1:+68842092 Msa0370910:CDS
GTATGCTTACGATAGGAGTT+AGG 0.400367 3_1:-68843779 None:intergenic
GTGGAACCAGCTGACTGAAT+TGG 0.406736 3_1:-68841569 None:intergenic
ACATGTAAGGTTTGAAATGT+TGG 0.411578 3_1:-68842037 None:intergenic
ATTTGAGGTGGGGTGGAAGA+AGG 0.415764 3_1:-68839725 None:intergenic
GTTTGAAATGTTGGTTCCCT+TGG 0.415913 3_1:-68842028 None:intergenic
AATAAGCTGACTGGGGTGAT+AGG 0.416739 3_1:+68842756 Msa0370910:CDS
TTGGCCAGCTTCCTGCTCCT+TGG 0.418002 3_1:-68842791 None:intergenic
CATGCTGCAGCAAGAGCAAT+AGG 0.418956 3_1:+68842248 Msa0370910:CDS
TGTCCATGGCTATATCTCTA+AGG 0.420570 3_1:-68841598 None:intergenic
TTACTGACCATTAAACTTGA+TGG 0.421279 3_1:+68843660 Msa0370910:CDS
AGATATAGCCATGGACAGCC+TGG 0.423263 3_1:+68841604 Msa0370910:CDS
AAGTTTATCATCGTTGATGA+TGG 0.424891 3_1:+68841089 Msa0370910:CDS
GTCTTTAATTGCCAAGGAGC+AGG 0.431429 3_1:+68842780 Msa0370910:CDS
TAGAAGAATTGTCCTGCATA+AGG 0.432028 3_1:+68843502 Msa0370910:CDS
AAAGCAGACCCAGCAGAAAC+AGG 0.434640 3_1:-68839966 None:intergenic
GAACAAATTCTTTACCTCTT+CGG 0.436592 3_1:-68843821 None:intergenic
TGAATTGGATATACAAGCTT+CGG 0.437132 3_1:-68841554 None:intergenic
ATTTGTTTGGATGGTGCACT+TGG 0.437449 3_1:+68840875 Msa0370910:CDS
GAGTTTCTTCAAGAGGTTGC+TGG 0.438427 3_1:+68842879 Msa0370910:CDS
GAGGTGGGGTGGAAGAAGGT+TGG 0.439759 3_1:-68839721 None:intergenic
GGTGAAGGACGATTGCCTTA+TGG 0.440385 3_1:+68839893 Msa0370910:CDS
GACTATTTCGGTTGTACCTA+AGG 0.440852 3_1:+68839872 Msa0370910:CDS
AGGAAAATTAGAAGTATCCT+TGG 0.441630 3_1:+68843268 Msa0370910:CDS
GAAGAGTCTGCTCTTAAGAC+AGG 0.452435 3_1:+68840353 Msa0370910:CDS
AGCTACTGACGCAACATGTA+AGG 0.454810 3_1:-68842050 None:intergenic
ATTCAGTCAGCTGGTTCCAC+AGG 0.456336 3_1:+68841572 Msa0370910:CDS
TGATAGAAACATTAGGTTCA+GGG 0.457902 3_1:+68841741 Msa0370910:CDS
GTCATAACACTAACCCTGAT+TGG 0.461560 3_1:-68843323 None:intergenic
TTGTTTCACCTGTTTCTGCT+GGG 0.461766 3_1:+68839958 Msa0370910:CDS
CTTGCTAGCTGTGGCGTCGA+TGG 0.462315 3_1:+68841695 Msa0370910:CDS
TTTGTGCTTTGACAAACAAC+TGG 0.463280 3_1:-68839626 None:intergenic
CTGGTGATGGTTGTATCGTA+TGG 0.466048 3_1:-68839607 None:intergenic
ACATGACGAGAACTAGGAAT+AGG 0.471380 3_1:-68840005 None:intergenic
TACATGTGGCATGCTTTAGC+TGG 0.471549 3_1:+68841482 Msa0370910:CDS
AGGCAGTGTTTGTAAATTCA+GGG 0.472464 3_1:+68840656 Msa0370910:CDS
GTATATCCAATTCAGTCAGC+TGG 0.476978 3_1:+68841563 Msa0370910:CDS
GCTCTCAAGACTGATCCATT+TGG 0.477025 3_1:-68842553 None:intergenic
GACGTGTTTCATTAACAAAA+CGG 0.477430 3_1:+68841771 Msa0370910:CDS
ATTGCCAAGGAGCAGGAAGC+TGG 0.478211 3_1:+68842787 Msa0370910:CDS
AGGCAATCGTCCTTCACCTT+AGG 0.479610 3_1:-68839888 None:intergenic
ATGACACGTTCTCATTCTAA+AGG 0.486566 3_1:+68843895 Msa0370910:three_prime_UTR
TCACGTTGCCCCTCACCATA+AGG 0.490694 3_1:-68839908 None:intergenic
CATTGGAGTACGCTCCAAAT+CGG 0.495713 3_1:-68843572 None:intergenic
AAGTTGCTTGGTGGACATGC+AGG 0.496836 3_1:+68843605 Msa0370910:CDS
AGAAGCAATTGAGTTTCCAT+TGG 0.497684 3_1:-68840317 None:intergenic
CTCCAATTCTGCGTTGAAAG+TGG 0.497807 3_1:+68840488 Msa0370910:CDS
ACTTGGAACATGTCCCAGTC+TGG 0.497856 3_1:-68842106 None:intergenic
GTCTTGAGAGCAAGATATGC+TGG 0.497867 3_1:+68842565 Msa0370910:CDS
TCTTCACCCTCGGCACTCTC+CGG 0.499147 3_1:+68840027 Msa0370910:CDS
CATGCTTTAGCTGGTTATTG+GGG 0.500822 3_1:+68841491 Msa0370910:CDS
AACATCAAAGGCAGAGGATG+TGG 0.504719 3_1:+68843549 Msa0370910:CDS
GAGATTGTTGCAAGAACTGT+TGG 0.507789 3_1:-68841313 None:intergenic
TACATCTTGATTTGTTTGGA+TGG 0.508853 3_1:+68840866 Msa0370910:CDS
AAGAAGCTAGTACTACCAAA+TGG 0.512223 3_1:+68842538 Msa0370910:CDS
TCATCAACGATGATAAACTT+TGG 0.518122 3_1:-68841086 None:intergenic
TGCAGTAGCAAGAGCATCTG+AGG 0.518388 3_1:+68841997 Msa0370910:CDS
GTGAAGACATGACGAGAACT+AGG 0.518804 3_1:-68840011 None:intergenic
TTTGTTTCAAGATCCAGTAA+TGG 0.520531 3_1:+68842606 Msa0370910:CDS
TGAAGAAACTCAACATCAAG+TGG 0.522242 3_1:-68842867 None:intergenic
ATTTGCAGCATCCCTTATGC+AGG 0.524518 3_1:-68843514 None:intergenic
GCTTTAGCTGGTTATTGGGG+AGG 0.526230 3_1:+68841494 Msa0370910:CDS
TGGTGATGGTTGTATCGTAT+GGG 0.526403 3_1:-68839606 None:intergenic
AGAAGAATTGTCCTGCATAA+GGG 0.528389 3_1:+68843503 Msa0370910:CDS
GGAAACTCAATTGCTTCTAG+TGG 0.531099 3_1:+68840322 Msa0370910:CDS
TACATGTCAAGCAATCCAAT+TGG 0.532755 3_1:-68843462 None:intergenic
TCTCGTCATGTCTTCACCCT+CGG 0.534008 3_1:+68840017 Msa0370910:CDS
GAAGGCGAACCGATAATTGA+AGG 0.534207 3_1:+68841143 Msa0370910:CDS
GCGTTTCGCGCAACTTTGCA+AGG 0.535399 3_1:+68840449 Msa0370910:CDS
TGATGTTGAGTTTCTTCAAG+AGG 0.537617 3_1:+68842872 Msa0370910:CDS
CTTGGTGGACATGCAGGAGG+AGG 0.539473 3_1:+68843611 Msa0370910:CDS
GGTGGATGATACCACGTGTT+GGG 0.540503 3_1:+68840276 Msa0370910:CDS
TGGAACTTGAATAAGCTGAC+TGG 0.542627 3_1:+68842747 Msa0370910:CDS
TTATCATCGTTGATGATGGA+TGG 0.546645 3_1:+68841093 Msa0370910:CDS
CCAAACAAATCAAGATGTAC+CGG 0.548377 3_1:-68840862 None:intergenic
CACAGTTATCTTGCTAGCTG+TGG 0.548683 3_1:+68841686 Msa0370910:CDS
GGAACTTGAATAAGCTGACT+GGG 0.554164 3_1:+68842748 Msa0370910:CDS
TGATAGAGTCAATAAAATCA+TGG 0.554811 3_1:-68841335 None:intergenic
TTGTATAATTTGAGGTGGGG+TGG 0.555423 3_1:-68839732 None:intergenic
AAATCCACAAGGAATAAAAG+AGG 0.555557 3_1:+68840918 Msa0370910:CDS
GGACGATTGCCTTATGGTGA+GGG 0.555694 3_1:+68839899 Msa0370910:CDS
AATTTGAAGTTCAGAAGTGA+TGG 0.558269 3_1:+68841288 Msa0370910:CDS
TGAATTGTATAATTTGAGGT+GGG 0.558321 3_1:-68839736 None:intergenic
TTTCAAGATCCAGTAATGGA+TGG 0.559262 3_1:+68842610 Msa0370910:CDS
TGATTGAGAAGTTTGAACAT+AGG 0.559730 3_1:-68840629 None:intergenic
TTCCATTGGAACATCGCTTG+CGG 0.560083 3_1:-68840303 None:intergenic
TGTTAGACCGAAAAGTTGCT+TGG 0.562615 3_1:+68843593 Msa0370910:CDS
ATGCATTACAGTGATAAGCC+TGG 0.563441 3_1:+68842493 Msa0370910:intron
ATCCGCAAGCGATGTTCCAA+TGG 0.563712 3_1:+68840301 Msa0370910:CDS
TTGATGGTGAAGGCAACTCA+AGG 0.563996 3_1:+68843676 Msa0370910:CDS
TTCGGTTGTACCTAAGGTGA+AGG 0.564448 3_1:+68839878 Msa0370910:CDS
CCTGAAATGGTTAAGTGTGT+CGG 0.565716 3_1:-68842834 None:intergenic
TGTGTCGGTGTGGTTTCCGA+TGG 0.566607 3_1:-68842819 None:intergenic
ATGATGAATTGTATAATTTG+AGG 0.567968 3_1:-68839740 None:intergenic
GACATAGAATTTGTATTCTG+AGG 0.570441 3_1:+68843699 Msa0370910:CDS
CTTTCCAAGCTGCCTAGTAG+AGG 0.571601 3_1:+68843248 Msa0370910:CDS
TAGACCGAAAAGTTGCTTGG+TGG 0.578729 3_1:+68843596 Msa0370910:CDS
GAATTGTATAATTTGAGGTG+GGG 0.579051 3_1:-68839735 None:intergenic
CTATTGCTCTTGCTGCAGCA+TGG 0.586018 3_1:-68842247 None:intergenic
AGAGATATTTGTGCCAGACT+GGG 0.590054 3_1:+68842093 Msa0370910:CDS
ATCTGAGGATTTCATGCCAA+GGG 0.592867 3_1:+68842012 Msa0370910:CDS
GAAACATTAGGTTCAGGGTA+CGG 0.596002 3_1:+68841746 Msa0370910:CDS
TGCACAATAGTAAACATCAA+AGG 0.596912 3_1:+68843537 Msa0370910:CDS
ATGAATTGTATAATTTGAGG+TGG 0.597732 3_1:-68839737 None:intergenic
GACTCACCGGAGAGTGCCGA+GGG 0.597740 3_1:-68840033 None:intergenic
TTTGTTTGGATGGTGCACTT+GGG 0.600213 3_1:+68840876 Msa0370910:CDS
TCAAACTTCTCAATCACTTG+AGG 0.600321 3_1:+68840636 Msa0370910:CDS
TGTGAGACATGCAACAAATG+AGG 0.600971 3_1:-68841844 None:intergenic
GAATAAAAGAGGGCATTCAA+AGG 0.601533 3_1:+68840929 Msa0370910:CDS
TATTTAGAGTCAAAATATGG+TGG 0.602078 3_1:+68840258 Msa0370910:CDS
GGCAGTGTTTGTAAATTCAG+GGG 0.603861 3_1:+68840657 Msa0370910:CDS
TCTTGAAAATAAGGAGACTC+CGG 0.604659 3_1:+68840843 Msa0370910:CDS
TTAAACAGTCTCTCAAGTGG+AGG 0.605758 3_1:+68841056 Msa0370910:intron
ATAGTAAACATCAAAGGCAG+AGG 0.608568 3_1:+68843543 Msa0370910:CDS
AGACTCACCGGAGAGTGCCG+AGG 0.610924 3_1:-68840034 None:intergenic
CTTTGACAAACAACTGGTGA+TGG 0.610947 3_1:-68839620 None:intergenic
ACCATTAAACTTGATGGTGA+AGG 0.612381 3_1:+68843666 Msa0370910:CDS
TTCACATTGAAGAGTCTCCA+AGG 0.612594 3_1:-68843285 None:intergenic
TTTGTAGAGCAAGCACGAGA+CGG 0.614843 3_1:+68842217 Msa0370910:intron
AGGACGATTGCCTTATGGTG+AGG 0.621258 3_1:+68839898 Msa0370910:CDS
AATATGTTAGGTTTGCAACA+AGG 0.621827 3_1:+68841247 Msa0370910:intron
ATATACAGTATCTCCAATCA+GGG 0.622646 3_1:+68843310 Msa0370910:CDS
ATAGGCGTCTTTAATTGCCA+AGG 0.624613 3_1:+68842774 Msa0370910:CDS
TTCAGTCAGCTGGTTCCACA+GGG 0.625466 3_1:+68841573 Msa0370910:CDS
AATCCACAAGGAATAAAAGA+GGG 0.625484 3_1:+68840919 Msa0370910:CDS
TCCGCAGATACGTTTACATG+TGG 0.628225 3_1:+68841468 Msa0370910:intron
GGTGATGGTTGTATCGTATG+GGG 0.628240 3_1:-68839605 None:intergenic
CATTAGAGACATCAATAGCA+AGG 0.628449 3_1:+68841804 Msa0370910:CDS
TGAAACAAACAATCTCGAGT+AGG 0.629226 3_1:-68842592 None:intergenic
CATCTGAGGATTTCATGCCA+AGG 0.631175 3_1:+68842011 Msa0370910:CDS
AAATTAAACAGTCTCTCAAG+TGG 0.633332 3_1:+68841053 Msa0370910:intron
ACAAACAATCTCGAGTAGGA+CGG 0.638323 3_1:-68842588 None:intergenic
CTTGACATGTACAATTCAGG+AGG 0.640277 3_1:+68843474 Msa0370910:CDS
CTTGCGGATTTCCCAACACG+TGG 0.644530 3_1:-68840287 None:intergenic
TTGCTTGGTGGACATGCAGG+AGG 0.648593 3_1:+68843608 Msa0370910:CDS
GACGATTGCCTTATGGTGAG+GGG 0.658944 3_1:+68839900 Msa0370910:CDS
TGATGGTGAAGGCAACTCAA+GGG 0.660992 3_1:+68843677 Msa0370910:CDS
AAGCTGGCCAATGAAACCAT+CGG 0.665066 3_1:+68842803 Msa0370910:CDS
TACACTAAAGTAAATCCACA+AGG 0.677457 3_1:+68840907 Msa0370910:CDS
ACATTAGGTTCAGGGTACGG+TGG 0.677890 3_1:+68841749 Msa0370910:CDS
TGGTGGATGATACCACGTGT+TGG 0.678677 3_1:+68840275 Msa0370910:CDS
GAACCTTAGAGATATAGCCA+TGG 0.685161 3_1:+68841595 Msa0370910:CDS
AGGATATTGGAGAAACACAA+AGG 0.687687 3_1:+68840808 Msa0370910:intron
CGAAACGCTCCATCCAACAC+AGG 0.691890 3_1:-68840434 None:intergenic
AATGGTTAAGTGTGTCGGTG+TGG 0.693578 3_1:-68842829 None:intergenic
GTGATGGTTGTATCGTATGG+GGG 0.697861 3_1:-68839604 None:intergenic
GAACTTGAATAAGCTGACTG+GGG 0.722176 3_1:+68842749 Msa0370910:CDS
GCTGCAGCAAGAGCAATAGG+TGG 0.723020 3_1:+68842251 Msa0370910:CDS
TATATCTCTAAGGTTCCCTG+TGG 0.766010 3_1:-68841588 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAATTAATACAATTAAAA+AGG - chr3_1:68842448-68842467 None:intergenic 10.0%
!! GTAAAGAATAAAAAATAATA+TGG - chr3_1:68842712-68842731 None:intergenic 10.0%
!! TGTATTTAAAAAAATATGCA+GGG + chr3_1:68840217-68840236 Msa0370910:intron 15.0%
!!! ATTTTTATTTCTAATGACAT+AGG + chr3_1:68840788-68840807 Msa0370910:intron 15.0%
!!! TAAAAGTCATAAAATTTTGA+TGG - chr3_1:68841656-68841675 None:intergenic 15.0%
!!! TACTTATATAAACACTTTTA+AGG + chr3_1:68842997-68843016 Msa0370910:intron 15.0%
!! ATAAGCACTTAAATATATAA+AGG + chr3_1:68843150-68843169 Msa0370910:intron 15.0%
!! TAAGCACTTAAATATATAAA+GGG + chr3_1:68843151-68843170 Msa0370910:intron 15.0%
!!! TTTTATAACATTATTAGACT+TGG - chr3_1:68843394-68843413 None:intergenic 15.0%
!!! TCTTTGAATTCTTTTTTATT+TGG - chr3_1:68843926-68843945 None:intergenic 15.0%
!! CTTAACAAATTAAAAAACGT+TGG + chr3_1:68839652-68839671 Msa0370910:five_prime_UTR 20.0%
!! ATGATGAATTGTATAATTTG+AGG - chr3_1:68839743-68839762 None:intergenic 20.0%
!! TTCATTATTAGCTAACTTAT+CGG - chr3_1:68840117-68840136 None:intergenic 20.0%
!! CTCATTGAATTAATATACTA+AGG - chr3_1:68840171-68840190 None:intergenic 20.0%
!! GTGTATTTAAAAAAATATGC+AGG + chr3_1:68840216-68840235 Msa0370910:intron 20.0%
!! GTATTTAAAAAAATATGCAG+GGG + chr3_1:68840218-68840237 Msa0370910:intron 20.0%
!!! CTTTATTTAGAGTCAAAATA+TGG + chr3_1:68840255-68840274 Msa0370910:CDS 20.0%
!!! TACAATGAATTTTTCAAAGA+AGG + chr3_1:68841125-68841144 Msa0370910:CDS 20.0%
!!! CACATCTTTTATAATATGTT+AGG + chr3_1:68841235-68841254 Msa0370910:intron 20.0%
!!! CTAATGTTTCTATCAAATTT+TGG - chr3_1:68841736-68841755 None:intergenic 20.0%
!! CAAAATTTGATAGAAACATT+AGG + chr3_1:68841734-68841753 Msa0370910:CDS 20.0%
!! AGGTTTGAATGTTAAATTTA+GGG + chr3_1:68842944-68842963 Msa0370910:intron 20.0%
!! ATGTTAACATATGTATAAAC+AGG + chr3_1:68843413-68843432 Msa0370910:intron 20.0%
!! AGAAGGTTGGTTAATTTATA+GGG - chr3_1:68839711-68839730 None:intergenic 25.0%
!! AAGAAGGTTGGTTAATTTAT+AGG - chr3_1:68839712-68839731 None:intergenic 25.0%
!! TGAATTGTATAATTTGAGGT+GGG - chr3_1:68839739-68839758 None:intergenic 25.0%
! ATGAATTGTATAATTTGAGG+TGG - chr3_1:68839740-68839759 None:intergenic 25.0%
!! AAAGGATAGTTGAATTTGTT+AGG - chr3_1:68839777-68839796 None:intergenic 25.0%
! AATGAAGTTGAGAATGTTAA+AGG - chr3_1:68839795-68839814 None:intergenic 25.0%
!! TATTTAGAGTCAAAATATGG+TGG + chr3_1:68840258-68840277 Msa0370910:CDS 25.0%
! TGTTTCATGTGTTAAATGAA+AGG + chr3_1:68840546-68840565 Msa0370910:intron 25.0%
!!! CTTTGATTTTTGAATGCTTT+AGG + chr3_1:68840601-68840620 Msa0370910:intron 25.0%
! TAAACATTGTGTAAAGAGTA+AGG - chr3_1:68840741-68840760 None:intergenic 25.0%
! TTTCTAATGACATAGGATAT+TGG + chr3_1:68840795-68840814 Msa0370910:intron 25.0%
! TTTCTGTCATCTTGAAAATA+AGG + chr3_1:68840834-68840853 Msa0370910:CDS 25.0%
!! ATCAAAGTTTTCAAATTTGC+AGG - chr3_1:68841014-68841033 None:intergenic 25.0%
! TGATAGAGTCAATAAAATCA+TGG - chr3_1:68841338-68841357 None:intergenic 25.0%
! CTTAAGTTAATGAGAATCAT+GGG - chr3_1:68841422-68841441 None:intergenic 25.0%
! TCTTAAGTTAATGAGAATCA+TGG - chr3_1:68841423-68841442 None:intergenic 25.0%
! CAATTGAGAGTAATGAAAAA+AGG - chr3_1:68841961-68841980 None:intergenic 25.0%
! AATGAGACAAGAATATTACT+TGG - chr3_1:68842126-68842145 None:intergenic 25.0%
! GCTCTACAAAAGAAATATTT+CGG - chr3_1:68842207-68842226 None:intergenic 25.0%
! ATCAAGAATTCTATCAGATT+CGG - chr3_1:68842402-68842421 None:intergenic 25.0%
!!! AATTAAAAAGGTTTTTTGCC+GGG - chr3_1:68842436-68842455 None:intergenic 25.0%
!!! CAATTAAAAAGGTTTTTTGC+CGG - chr3_1:68842437-68842456 None:intergenic 25.0%
!!! ATTTTAAAATCATGATTGCC+AGG - chr3_1:68842514-68842533 None:intergenic 25.0%
! TGTAACTATTTGTCTCTAAA+TGG + chr3_1:68842650-68842669 Msa0370910:intron 25.0%
! CAGGTTTGAATGTTAAATTT+AGG + chr3_1:68842943-68842962 Msa0370910:intron 25.0%
! ATAAGCTGAAAACAACTTAT+AGG - chr3_1:68843060-68843079 None:intergenic 25.0%
!!! CTTATTTTCTTAAGCTTTTC+AGG + chr3_1:68843075-68843094 Msa0370910:intron 25.0%
! CATATGTATAAACAGGTATT+TGG + chr3_1:68843420-68843439 Msa0370910:intron 25.0%
! GAATTGTATAATTTGAGGTG+GGG - chr3_1:68839738-68839757 None:intergenic 30.0%
GTCTACAAACATGACTATTT+CGG + chr3_1:68839860-68839879 Msa0370910:CDS 30.0%
!! GTGAAACAACAATGTTTTGA+GGG - chr3_1:68839947-68839966 None:intergenic 30.0%
AAAAAATATGCAGGGGATAT+AGG + chr3_1:68840225-68840244 Msa0370910:intron 30.0%
TGATTGAGAAGTTTGAACAT+AGG - chr3_1:68840632-68840651 None:intergenic 30.0%
!! GAGTCTTTGATTAGCTTAAA+TGG - chr3_1:68840688-68840707 None:intergenic 30.0%
!! TACATCTTGATTTGTTTGGA+TGG + chr3_1:68840866-68840885 Msa0370910:CDS 30.0%
TACACTAAAGTAAATCCACA+AGG + chr3_1:68840907-68840926 Msa0370910:CDS 30.0%
AAATCCACAAGGAATAAAAG+AGG + chr3_1:68840918-68840937 Msa0370910:CDS 30.0%
AATCCACAAGGAATAAAAGA+GGG + chr3_1:68840919-68840938 Msa0370910:CDS 30.0%
AAATTAAACAGTCTCTCAAG+TGG + chr3_1:68841053-68841072 Msa0370910:intron 30.0%
TCATCAACGATGATAAACTT+TGG - chr3_1:68841089-68841108 None:intergenic 30.0%
! AAGTTTATCATCGTTGATGA+TGG + chr3_1:68841089-68841108 Msa0370910:CDS 30.0%
ATTGAAATGAGAGACTTACT+GGG - chr3_1:68841171-68841190 None:intergenic 30.0%
AATTGAAATGAGAGACTTAC+TGG - chr3_1:68841172-68841191 None:intergenic 30.0%
AATATGTTAGGTTTGCAACA+AGG + chr3_1:68841247-68841266 Msa0370910:intron 30.0%
! AATTTGAAGTTCAGAAGTGA+TGG + chr3_1:68841288-68841307 Msa0370910:CDS 30.0%
ATAGGCTTCTTATTGAGATA+AGG - chr3_1:68841388-68841407 None:intergenic 30.0%
TGAATTGGATATACAAGCTT+CGG - chr3_1:68841557-68841576 None:intergenic 30.0%
TTGATAGAAACATTAGGTTC+AGG + chr3_1:68841740-68841759 Msa0370910:CDS 30.0%
TGATAGAAACATTAGGTTCA+GGG + chr3_1:68841741-68841760 Msa0370910:CDS 30.0%
GACGTGTTTCATTAACAAAA+CGG + chr3_1:68841771-68841790 Msa0370910:CDS 30.0%
ACAACTCTGATTCAATTTAC+AGG + chr3_1:68841864-68841883 Msa0370910:CDS 30.0%
AAGGATGATTCATCAGAAAA+AGG - chr3_1:68841942-68841961 None:intergenic 30.0%
! ACATGTAAGGTTTGAAATGT+TGG - chr3_1:68842040-68842059 None:intergenic 30.0%
TTTGTTTCAAGATCCAGTAA+TGG + chr3_1:68842606-68842625 Msa0370910:CDS 30.0%
TTTACAGTCTGCTGAAAATT+TGG + chr3_1:68842727-68842746 Msa0370910:intron 30.0%
!! TGGTTTAACTTTTCCTGAAA+TGG - chr3_1:68842850-68842869 None:intergenic 30.0%
! TACAAACTGTACAATTTTGC+AGG + chr3_1:68843221-68843240 Msa0370910:intron 30.0%
! ACTTCTAATTTTCCTCTACT+AGG - chr3_1:68843263-68843282 None:intergenic 30.0%
!! AGGAAAATTAGAAGTATCCT+TGG + chr3_1:68843268-68843287 Msa0370910:CDS 30.0%
TATATACAGTATCTCCAATC+AGG + chr3_1:68843309-68843328 Msa0370910:CDS 30.0%
ATATACAGTATCTCCAATCA+GGG + chr3_1:68843310-68843329 Msa0370910:CDS 30.0%
TGCACAATAGTAAACATCAA+AGG + chr3_1:68843537-68843556 Msa0370910:CDS 30.0%
TTACTGACCATTAAACTTGA+TGG + chr3_1:68843660-68843679 Msa0370910:CDS 30.0%
GACATAGAATTTGTATTCTG+AGG + chr3_1:68843699-68843718 Msa0370910:CDS 30.0%
! TTCTTTTGTATGCTTACGAT+AGG - chr3_1:68843789-68843808 None:intergenic 30.0%
! AATTTTTCATTGTACCGAAG+AGG + chr3_1:68843807-68843826 Msa0370910:three_prime_UTR 30.0%
GAACAAATTCTTTACCTCTT+CGG - chr3_1:68843824-68843843 None:intergenic 30.0%
TTTGTGCTTTGACAAACAAC+TGG - chr3_1:68839629-68839648 None:intergenic 35.0%
! GGTGAAACAACAATGTTTTG+AGG - chr3_1:68839948-68839967 None:intergenic 35.0%
TCAGCTATAAGAAAGGAGAA+GGG - chr3_1:68840063-68840082 None:intergenic 35.0%
ATCAGCTATAAGAAAGGAGA+AGG - chr3_1:68840064-68840083 None:intergenic 35.0%
CGCTATATCAGCTATAAGAA+AGG - chr3_1:68840070-68840089 None:intergenic 35.0%
AGAAGCAATTGAGTTTCCAT+TGG - chr3_1:68840320-68840339 None:intergenic 35.0%
CACAGGTAAAAAGAGAATGT+AGG - chr3_1:68840420-68840439 None:intergenic 35.0%
! CATTCTCTTTTTACCTGTGT+TGG + chr3_1:68840421-68840440 Msa0370910:CDS 35.0%
TCAAACTTCTCAATCACTTG+AGG + chr3_1:68840636-68840655 Msa0370910:CDS 35.0%
AGGCAGTGTTTGTAAATTCA+GGG + chr3_1:68840656-68840675 Msa0370910:CDS 35.0%
AGGATATTGGAGAAACACAA+AGG + chr3_1:68840808-68840827 Msa0370910:intron 35.0%
TCTTGAAAATAAGGAGACTC+CGG + chr3_1:68840843-68840862 Msa0370910:CDS 35.0%
CCAAACAAATCAAGATGTAC+CGG - chr3_1:68840865-68840884 None:intergenic 35.0%
!! GAATAAAAGAGGGCATTCAA+AGG + chr3_1:68840929-68840948 Msa0370910:CDS 35.0%
AATTTGCAGGCTTATCACAT+AGG - chr3_1:68841001-68841020 None:intergenic 35.0%
!! TTATCATCGTTGATGATGGA+TGG + chr3_1:68841093-68841112 Msa0370910:CDS 35.0%
TACTGGGTTCCTTCAATTAT+CGG - chr3_1:68841155-68841174 None:intergenic 35.0%
GCATGAGAACTAAGAAATGA+AGG - chr3_1:68841214-68841233 None:intergenic 35.0%
AACAAGGCTGATAGACATTA+AGG + chr3_1:68841263-68841282 Msa0370910:CDS 35.0%
AGTTAATGAGAATCATGGGA+TGG - chr3_1:68841418-68841437 None:intergenic 35.0%
TGAACAAGCATACTCATTGT+CGG - chr3_1:68841447-68841466 None:intergenic 35.0%
! TTTTCGTTGCGTTTGAAGAT+GGG - chr3_1:68841526-68841545 None:intergenic 35.0%
! TTTTTCGTTGCGTTTGAAGA+TGG - chr3_1:68841527-68841546 None:intergenic 35.0%
CATTAGAGACATCAATAGCA+AGG + chr3_1:68841804-68841823 Msa0370910:CDS 35.0%
! AGCTTTTAACAGTCTTCTTC+TGG + chr3_1:68842069-68842088 Msa0370910:CDS 35.0%
! GCTTTTAACAGTCTTCTTCT+GGG + chr3_1:68842070-68842089 Msa0370910:CDS 35.0%
AAGAAGCTAGTACTACCAAA+TGG + chr3_1:68842538-68842557 Msa0370910:CDS 35.0%
TGAAACAAACAATCTCGAGT+AGG - chr3_1:68842595-68842614 None:intergenic 35.0%
! TTTCAAGATCCAGTAATGGA+TGG + chr3_1:68842610-68842629 Msa0370910:CDS 35.0%
!! ATCCAGTAATGGATGGTAAA+AGG + chr3_1:68842617-68842636 Msa0370910:CDS 35.0%
! TACCTTTTACCATCCATTAC+TGG - chr3_1:68842622-68842641 None:intergenic 35.0%
! ATGAAAGTTGATCGGAAAAG+TGG - chr3_1:68842676-68842695 None:intergenic 35.0%
! CAGTGAGAATGAAAGTTGAT+CGG - chr3_1:68842684-68842703 None:intergenic 35.0%
TGAAGAAACTCAACATCAAG+TGG - chr3_1:68842870-68842889 None:intergenic 35.0%
TGATGTTGAGTTTCTTCAAG+AGG + chr3_1:68842872-68842891 Msa0370910:CDS 35.0%
ATACTATATGCCTTCAATGC+AGG + chr3_1:68842924-68842943 Msa0370910:intron 35.0%
AACATTCAAACCTGCATTGA+AGG - chr3_1:68842937-68842956 None:intergenic 35.0%
! TGTTAAATTTAGGGCATGTC+TGG + chr3_1:68842953-68842972 Msa0370910:intron 35.0%
TGTACAGTTTGTAAGCATGT+TGG - chr3_1:68843214-68843233 None:intergenic 35.0%
TACATGTCAAGCAATCCAAT+TGG - chr3_1:68843465-68843484 None:intergenic 35.0%
TTGCTTGACATGTACAATTC+AGG + chr3_1:68843471-68843490 Msa0370910:CDS 35.0%
TAGAAGAATTGTCCTGCATA+AGG + chr3_1:68843502-68843521 Msa0370910:CDS 35.0%
AGAAGAATTGTCCTGCATAA+GGG + chr3_1:68843503-68843522 Msa0370910:CDS 35.0%
ATAGTAAACATCAAAGGCAG+AGG + chr3_1:68843543-68843562 Msa0370910:CDS 35.0%
!! TTTTCCTACAACTCTGAAGA+TGG + chr3_1:68843636-68843655 Msa0370910:CDS 35.0%
TAATCCATCTTCAGAGTTGT+AGG - chr3_1:68843643-68843662 None:intergenic 35.0%
!! ACCATTAAACTTGATGGTGA+AGG + chr3_1:68843666-68843685 Msa0370910:CDS 35.0%
ATGACACGTTCTCATTCTAA+AGG + chr3_1:68843895-68843914 Msa0370910:three_prime_UTR 35.0%
!! TGGTGATGGTTGTATCGTAT+GGG - chr3_1:68839609-68839628 None:intergenic 40.0%
CTTTGACAAACAACTGGTGA+TGG - chr3_1:68839623-68839642 None:intergenic 40.0%
! TTGTATAATTTGAGGTGGGG+TGG - chr3_1:68839735-68839754 None:intergenic 40.0%
GACTATTTCGGTTGTACCTA+AGG + chr3_1:68839872-68839891 Msa0370910:CDS 40.0%
!! TTGTTTCACCTGTTTCTGCT+GGG + chr3_1:68839958-68839977 Msa0370910:CDS 40.0%
ACATGACGAGAACTAGGAAT+AGG - chr3_1:68840008-68840027 None:intergenic 40.0%
TAGCTGATATAGCGAGCTAT+TGG + chr3_1:68840076-68840095 Msa0370910:intron 40.0%
! AACTTATCGGCTATCAGCTA+CGG - chr3_1:68840104-68840123 None:intergenic 40.0%
GGAAACTCAATTGCTTCTAG+TGG + chr3_1:68840322-68840341 Msa0370910:CDS 40.0%
! CTCTTTTTACCTGTGTTGGA+TGG + chr3_1:68840425-68840444 Msa0370910:CDS 40.0%
AACCACTTTCAACGCAGAAT+TGG - chr3_1:68840493-68840512 None:intergenic 40.0%
GAGGCAGTGTTTGTAAATTC+AGG + chr3_1:68840655-68840674 Msa0370910:CDS 40.0%
GGCAGTGTTTGTAAATTCAG+GGG + chr3_1:68840657-68840676 Msa0370910:CDS 40.0%
!! CCGGTACATCTTGATTTGTT+TGG + chr3_1:68840862-68840881 Msa0370910:CDS 40.0%
ATTTGTTTGGATGGTGCACT+TGG + chr3_1:68840875-68840894 Msa0370910:CDS 40.0%
TTTGTTTGGATGGTGCACTT+GGG + chr3_1:68840876-68840895 Msa0370910:CDS 40.0%
! ATGCCCTCTTTTATTCCTTG+TGG - chr3_1:68840925-68840944 None:intergenic 40.0%
TTAAACAGTCTCTCAAGTGG+AGG + chr3_1:68841056-68841075 Msa0370910:intron 40.0%
GAGATTGTTGCAAGAACTGT+TGG - chr3_1:68841316-68841335 None:intergenic 40.0%
TCATGGGATGGAAGTTCAAT+AGG - chr3_1:68841406-68841425 None:intergenic 40.0%
GCATGCTTTAGCTGGTTATT+GGG + chr3_1:68841490-68841509 Msa0370910:CDS 40.0%
CATGCTTTAGCTGGTTATTG+GGG + chr3_1:68841491-68841510 Msa0370910:CDS 40.0%
GTATATCCAATTCAGTCAGC+TGG + chr3_1:68841563-68841582 Msa0370910:CDS 40.0%
!! TATATCTCTAAGGTTCCCTG+TGG - chr3_1:68841591-68841610 None:intergenic 40.0%
GAACCTTAGAGATATAGCCA+TGG + chr3_1:68841595-68841614 Msa0370910:CDS 40.0%
TGTCCATGGCTATATCTCTA+AGG - chr3_1:68841601-68841620 None:intergenic 40.0%
! ATATTTTTCCAGGCTGTCCA+TGG - chr3_1:68841615-68841634 None:intergenic 40.0%
ATGGACAGCCTGGAAAAATA+TGG + chr3_1:68841614-68841633 Msa0370910:CDS 40.0%
AGCCTGGAAAAATATGGAGT+GGG + chr3_1:68841620-68841639 Msa0370910:CDS 40.0%
! TTCCCACTCCATATTTTTCC+AGG - chr3_1:68841625-68841644 None:intergenic 40.0%
GAAACATTAGGTTCAGGGTA+CGG + chr3_1:68841746-68841765 Msa0370910:CDS 40.0%
TGTGAGACATGCAACAAATG+AGG - chr3_1:68841847-68841866 None:intergenic 40.0%
ATCTGAGGATTTCATGCCAA+GGG + chr3_1:68842012-68842031 Msa0370910:CDS 40.0%
!! GTTTGAAATGTTGGTTCCCT+TGG - chr3_1:68842031-68842050 None:intergenic 40.0%
AGAGATATTTGTGCCAGACT+GGG + chr3_1:68842093-68842112 Msa0370910:CDS 40.0%
TCTTGATCTCACTTGTTTCC+CGG + chr3_1:68842415-68842434 Msa0370910:intron 40.0%
ATGCATTACAGTGATAAGCC+TGG + chr3_1:68842493-68842512 Msa0370910:intron 40.0%
ACAAACAATCTCGAGTAGGA+CGG - chr3_1:68842591-68842610 None:intergenic 40.0%
TGGAACTTGAATAAGCTGAC+TGG + chr3_1:68842747-68842766 Msa0370910:CDS 40.0%
GGAACTTGAATAAGCTGACT+GGG + chr3_1:68842748-68842767 Msa0370910:CDS 40.0%
GAACTTGAATAAGCTGACTG+GGG + chr3_1:68842749-68842768 Msa0370910:CDS 40.0%
ATAGGCGTCTTTAATTGCCA+AGG + chr3_1:68842774-68842793 Msa0370910:CDS 40.0%
CCTGAAATGGTTAAGTGTGT+CGG - chr3_1:68842837-68842856 None:intergenic 40.0%
AAGAGGTTGCTGGTGAAAAT+TGG + chr3_1:68842889-68842908 Msa0370910:intron 40.0%
GTTGCTGGTGAAAATTGGAA+TGG + chr3_1:68842894-68842913 Msa0370910:intron 40.0%
! AGGCTGTTTGAGATAGCTTA+TGG + chr3_1:68843017-68843036 Msa0370910:intron 40.0%
TTCACATTGAAGAGTCTCCA+AGG - chr3_1:68843288-68843307 None:intergenic 40.0%
GTCATAACACTAACCCTGAT+TGG - chr3_1:68843326-68843345 None:intergenic 40.0%
CATATGCAATTTGCGCCAAT+TGG + chr3_1:68843447-68843466 Msa0370910:CDS 40.0%
CTTGACATGTACAATTCAGG+AGG + chr3_1:68843474-68843493 Msa0370910:CDS 40.0%
! GCAACTTTTCGGTCTAACAT+TGG - chr3_1:68843592-68843611 None:intergenic 40.0%
TGTTAGACCGAAAAGTTGCT+TGG + chr3_1:68843593-68843612 Msa0370910:CDS 40.0%
! ATGTCCACCAAGCAACTTTT+CGG - chr3_1:68843603-68843622 None:intergenic 40.0%
GCCTTCACCATCAAGTTTAA+TGG - chr3_1:68843670-68843689 None:intergenic 40.0%
! ACAAGAATCGACTTTCGCTT+TGG - chr3_1:68843739-68843758 None:intergenic 40.0%
GTATGCTTACGATAGGAGTT+AGG - chr3_1:68843782-68843801 None:intergenic 40.0%
TTGTATCGTATGGGGGAAAC+AGG - chr3_1:68839600-68839619 None:intergenic 45.0%
GTGATGGTTGTATCGTATGG+GGG - chr3_1:68839607-68839626 None:intergenic 45.0%
! GGTGATGGTTGTATCGTATG+GGG - chr3_1:68839608-68839627 None:intergenic 45.0%
!! CTGGTGATGGTTGTATCGTA+TGG - chr3_1:68839610-68839629 None:intergenic 45.0%
TTCGGTTGTACCTAAGGTGA+AGG + chr3_1:68839878-68839897 Msa0370910:CDS 45.0%
!! GTTGTTTCACCTGTTTCTGC+TGG + chr3_1:68839957-68839976 Msa0370910:CDS 45.0%
!!! TCTGCTGGGTCTGCTTTTTT+AGG + chr3_1:68839972-68839991 Msa0370910:CDS 45.0%
GTGAAGACATGACGAGAACT+AGG - chr3_1:68840014-68840033 None:intergenic 45.0%
TTCCATTGGAACATCGCTTG+CGG - chr3_1:68840306-68840325 None:intergenic 45.0%
GAAGAGTCTGCTCTTAAGAC+AGG + chr3_1:68840353-68840372 Msa0370910:CDS 45.0%
CTCCAATTCTGCGTTGAAAG+TGG + chr3_1:68840488-68840507 Msa0370910:CDS 45.0%
GAAGGCGAACCGATAATTGA+AGG + chr3_1:68841143-68841162 Msa0370910:CDS 45.0%
TCCGCAGATACGTTTACATG+TGG + chr3_1:68841468-68841487 Msa0370910:intron 45.0%
GCCACATGTAAACGTATCTG+CGG - chr3_1:68841472-68841491 None:intergenic 45.0%
TACATGTGGCATGCTTTAGC+TGG + chr3_1:68841482-68841501 Msa0370910:CDS 45.0%
GGCATGCTTTAGCTGGTTAT+TGG + chr3_1:68841489-68841508 Msa0370910:CDS 45.0%
CAGCCTGGAAAAATATGGAG+TGG + chr3_1:68841619-68841638 Msa0370910:CDS 45.0%
CACAGTTATCTTGCTAGCTG+TGG + chr3_1:68841686-68841705 Msa0370910:CDS 45.0%
CATCTGAGGATTTCATGCCA+AGG + chr3_1:68842011-68842030 Msa0370910:CDS 45.0%
AGCTACTGACGCAACATGTA+AGG - chr3_1:68842053-68842072 None:intergenic 45.0%
GAGAGATATTTGTGCCAGAC+TGG + chr3_1:68842092-68842111 Msa0370910:CDS 45.0%
TTTGTAGAGCAAGCACGAGA+CGG + chr3_1:68842217-68842236 Msa0370910:intron 45.0%
GCTCTCAAGACTGATCCATT+TGG - chr3_1:68842556-68842575 None:intergenic 45.0%
GTCTTGAGAGCAAGATATGC+TGG + chr3_1:68842565-68842584 Msa0370910:CDS 45.0%
AATAAGCTGACTGGGGTGAT+AGG + chr3_1:68842756-68842775 Msa0370910:CDS 45.0%
GTCTTTAATTGCCAAGGAGC+AGG + chr3_1:68842780-68842799 Msa0370910:CDS 45.0%
AAGCTGGCCAATGAAACCAT+CGG + chr3_1:68842803-68842822 Msa0370910:CDS 45.0%
GTGGTTTCCGATGGTTTCAT+TGG - chr3_1:68842813-68842832 None:intergenic 45.0%
! AATGGTTAAGTGTGTCGGTG+TGG - chr3_1:68842832-68842851 None:intergenic 45.0%
CCGACACACTTAACCATTTC+AGG + chr3_1:68842834-68842853 Msa0370910:CDS 45.0%
GAGTTTCTTCAAGAGGTTGC+TGG + chr3_1:68842879-68842898 Msa0370910:CDS 45.0%
! TTTTCCTCTACTAGGCAGCT+TGG - chr3_1:68843255-68843274 None:intergenic 45.0%
ATTTGCAGCATCCCTTATGC+AGG - chr3_1:68843517-68843536 None:intergenic 45.0%
AACATCAAAGGCAGAGGATG+TGG + chr3_1:68843549-68843568 Msa0370910:CDS 45.0%
CATTGGAGTACGCTCCAAAT+CGG - chr3_1:68843575-68843594 None:intergenic 45.0%
TAGACCGAAAAGTTGCTTGG+TGG + chr3_1:68843596-68843615 Msa0370910:CDS 45.0%
!! TTGATGGTGAAGGCAACTCA+AGG + chr3_1:68843676-68843695 Msa0370910:CDS 45.0%
! TGATGGTGAAGGCAACTCAA+GGG + chr3_1:68843677-68843696 Msa0370910:CDS 45.0%
! ATTTGAGGTGGGGTGGAAGA+AGG - chr3_1:68839728-68839747 None:intergenic 50.0%
AGGCAATCGTCCTTCACCTT+AGG - chr3_1:68839891-68839910 None:intergenic 50.0%
GGTGAAGGACGATTGCCTTA+TGG + chr3_1:68839893-68839912 Msa0370910:CDS 50.0%
AGGACGATTGCCTTATGGTG+AGG + chr3_1:68839898-68839917 Msa0370910:CDS 50.0%
GGACGATTGCCTTATGGTGA+GGG + chr3_1:68839899-68839918 Msa0370910:CDS 50.0%
GACGATTGCCTTATGGTGAG+GGG + chr3_1:68839900-68839919 Msa0370910:CDS 50.0%
AAAGCAGACCCAGCAGAAAC+AGG - chr3_1:68839969-68839988 None:intergenic 50.0%
TCTCGTCATGTCTTCACCCT+CGG + chr3_1:68840017-68840036 Msa0370910:CDS 50.0%
! TGGTGGATGATACCACGTGT+TGG + chr3_1:68840275-68840294 Msa0370910:CDS 50.0%
GGTGGATGATACCACGTGTT+GGG + chr3_1:68840276-68840295 Msa0370910:CDS 50.0%
ATCCGCAAGCGATGTTCCAA+TGG + chr3_1:68840301-68840320 Msa0370910:CDS 50.0%
GCTTTAGCTGGTTATTGGGG+AGG + chr3_1:68841494-68841513 Msa0370910:CDS 50.0%
GTGGAACCAGCTGACTGAAT+TGG - chr3_1:68841572-68841591 None:intergenic 50.0%
! ATTCAGTCAGCTGGTTCCAC+AGG + chr3_1:68841572-68841591 Msa0370910:CDS 50.0%
! TTCAGTCAGCTGGTTCCACA+GGG + chr3_1:68841573-68841592 Msa0370910:CDS 50.0%
AGATATAGCCATGGACAGCC+TGG + chr3_1:68841604-68841623 Msa0370910:CDS 50.0%
ACATTAGGTTCAGGGTACGG+TGG + chr3_1:68841749-68841768 Msa0370910:CDS 50.0%
!! TGCAGTAGCAAGAGCATCTG+AGG + chr3_1:68841997-68842016 Msa0370910:CDS 50.0%
ACTTGGAACATGTCCCAGTC+TGG - chr3_1:68842109-68842128 None:intergenic 50.0%
CTATTGCTCTTGCTGCAGCA+TGG - chr3_1:68842250-68842269 None:intergenic 50.0%
CATGCTGCAGCAAGAGCAAT+AGG + chr3_1:68842248-68842267 Msa0370910:CDS 50.0%
CTTTCCAAGCTGCCTAGTAG+AGG + chr3_1:68843248-68843267 Msa0370910:CDS 50.0%
! AAGTTGCTTGGTGGACATGC+AGG + chr3_1:68843605-68843624 Msa0370910:CDS 50.0%
TCACGTTGCCCCTCACCATA+AGG - chr3_1:68839911-68839930 None:intergenic 55.0%
GGAGAAGGGATGAGACTCAC+CGG - chr3_1:68840049-68840068 None:intergenic 55.0%
CTTGCGGATTTCCCAACACG+TGG - chr3_1:68840290-68840309 None:intergenic 55.0%
CGAAACGCTCCATCCAACAC+AGG - chr3_1:68840437-68840456 None:intergenic 55.0%
GCGTTTCGCGCAACTTTGCA+AGG + chr3_1:68840449-68840468 Msa0370910:CDS 55.0%
GCTGCAGCAAGAGCAATAGG+TGG + chr3_1:68842251-68842270 Msa0370910:CDS 55.0%
ATTGCCAAGGAGCAGGAAGC+TGG + chr3_1:68842787-68842806 Msa0370910:CDS 55.0%
! TGTGTCGGTGTGGTTTCCGA+TGG - chr3_1:68842822-68842841 None:intergenic 55.0%
! TTGCTTGGTGGACATGCAGG+AGG + chr3_1:68843608-68843627 Msa0370910:CDS 55.0%
GAGGTGGGGTGGAAGAAGGT+TGG - chr3_1:68839724-68839743 None:intergenic 60.0%
TCTTCACCCTCGGCACTCTC+CGG + chr3_1:68840027-68840046 Msa0370910:CDS 60.0%
! CTTGCTAGCTGTGGCGTCGA+TGG + chr3_1:68841695-68841714 Msa0370910:CDS 60.0%
TTGGCCAGCTTCCTGCTCCT+TGG - chr3_1:68842794-68842813 None:intergenic 60.0%
GGCAGAGGATGTGGCCGATT+TGG + chr3_1:68843558-68843577 Msa0370910:CDS 60.0%
! CTTGGTGGACATGCAGGAGG+AGG + chr3_1:68843611-68843630 Msa0370910:CDS 60.0%
!! GACTCACCGGAGAGTGCCGA+GGG - chr3_1:68840036-68840055 None:intergenic 65.0%
!! AGACTCACCGGAGAGTGCCG+AGG - chr3_1:68840037-68840056 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 68839552 68843958 68839552 ID=Msa0370910;Name=Msa0370910
chr3_1 mRNA 68839552 68843958 68839552 ID=Msa0370910-mRNA-1;Parent=Msa0370910;Name=Msa0370910-mRNA-1;_AED=0.10;_eAED=0.10;_QI=135|0.91|0.92|1|0.83|0.84|13|239|796
chr3_1 exon 68839552 68840048 68839552 ID=Msa0370910-mRNA-1:exon:14518;Parent=Msa0370910-mRNA-1
chr3_1 exon 68840238 68840509 68840238 ID=Msa0370910-mRNA-1:exon:14519;Parent=Msa0370910-mRNA-1
chr3_1 exon 68840623 68840713 68840623 ID=Msa0370910-mRNA-1:exon:14520;Parent=Msa0370910-mRNA-1
chr3_1 exon 68840810 68840950 68840810 ID=Msa0370910-mRNA-1:exon:14521;Parent=Msa0370910-mRNA-1
chr3_1 exon 68841064 68841171 68841064 ID=Msa0370910-mRNA-1:exon:14522;Parent=Msa0370910-mRNA-1
chr3_1 exon 68841257 68841376 68841257 ID=Msa0370910-mRNA-1:exon:14523;Parent=Msa0370910-mRNA-1
chr3_1 exon 68841475 68841885 68841475 ID=Msa0370910-mRNA-1:exon:14524;Parent=Msa0370910-mRNA-1
chr3_1 exon 68841985 68842126 68841985 ID=Msa0370910-mRNA-1:exon:14525;Parent=Msa0370910-mRNA-1
chr3_1 exon 68842224 68842283 68842224 ID=Msa0370910-mRNA-1:exon:14526;Parent=Msa0370910-mRNA-1
chr3_1 exon 68842496 68842638 68842496 ID=Msa0370910-mRNA-1:exon:14527;Parent=Msa0370910-mRNA-1
chr3_1 exon 68842734 68842900 68842734 ID=Msa0370910-mRNA-1:exon:14528;Parent=Msa0370910-mRNA-1
chr3_1 exon 68843243 68843331 68843243 ID=Msa0370910-mRNA-1:exon:14529;Parent=Msa0370910-mRNA-1
chr3_1 exon 68843435 68843958 68843435 ID=Msa0370910-mRNA-1:exon:14530;Parent=Msa0370910-mRNA-1
chr3_1 five_prime_UTR 68839552 68839686 68839552 ID=Msa0370910-mRNA-1:five_prime_utr;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68839687 68840048 68839687 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68840238 68840509 68840238 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68840623 68840713 68840623 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68840810 68840950 68840810 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68841064 68841171 68841064 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68841257 68841376 68841257 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68841475 68841885 68841475 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68841985 68842126 68841985 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68842224 68842283 68842224 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68842496 68842638 68842496 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68842734 68842900 68842734 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68843243 68843331 68843243 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 CDS 68843435 68843719 68843435 ID=Msa0370910-mRNA-1:cds;Parent=Msa0370910-mRNA-1
chr3_1 three_prime_UTR 68843720 68843958 68843720 ID=Msa0370910-mRNA-1:three_prime_utr;Parent=Msa0370910-mRNA-1
Gene Sequence

>Msa0370910

ATGAATAAAATATTGTCACTTCCCTATAAATTAACCAACCTTCTTCCACCCCACCTCAAATTATACAATTCATCATACATCAACTTACCTAACAAATTCAACTATCCTTTAACATTCTCAACTTCATTTTTGTGTTCTTATTCTGTTACTTCTCTCAACTTTGTTCATTCTTTGTCTACAAACATGACTATTTCGGTTGTACCTAAGGTGAAGGACGATTGCCTTATGGTGAGGGGCAACGTGATTCTCACAAATGTCCCTCAAAACATTGTTGTTTCACCTGTTTCTGCTGGGTCTGCTTTTTTAGGTGCAACTTCTCCTATTCCTAGTTCTCGTCATGTCTTCACCCTCGGCACTCTCCGGGGATATAGGTTGTTATCTTTATTTAGAGTCAAAATATGGTGGATGATACCACGTGTTGGGAAATCCGCAAGCGATGTTCCAATGGAAACTCAATTGCTTCTAGTGGAAGCAAGAGAAGAGTCTGCTCTTAAGACAGGTTTTTCTTCTGATTCTGAAGAGACAGAAGAAGAGAATACTTCCTACATTCTCTTTTTACCTGTGTTGGATGGAGCGTTTCGCGCAACTTTGCAAGGAACTGCATTGAACGAGCTCCAATTCTGCGTTGAAAGTGGAGATGCCTATGTTCAAACTTCTCAATCACTTGAGGCAGTGTTTGTAAATTCAGGGGACAATCCATTTAAGCTAATCAAAGACTCTATCAAGATATTGGAGAAACACAAAGGAACTTTCTGTCATCTTGAAAATAAGGAGACTCCGGTACATCTTGATTTGTTTGGATGGTGCACTTGGGATGCATTTTACACTAAAGTAAATCCACAAGGAATAAAAGAGGGCATTCAAAGTCTCTCAAGTGGAGGTTTTACACCAAAGTTTATCATCGTTGATGATGGATGGCAAGAGACGTACAATGAATTTTTCAAAGAAGGCGAACCGATAATTGAAGGAACCCAGTTTGCAACAAGGCTGATAGACATTAAGGAAAATTTGAAGTTCAGAAGTGATGGCTCCAACAGTTCTTGCAACAATCTCCATGATTTTATTGACTCTATCAAACAGAATTTGAGTGTAAAATACGTTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGAGTACTCCCATCTTCAAACGCAACGAAAAAATATAATCCGAAGCTTGTATATCCAATTCAGTCAGCTGGTTCCACAGGGAACCTTAGAGATATAGCCATGGACAGCCTGGAAAAATATGGAGTGGGAATGATAGATCCATCAAAATTTTATGACTTTTACAATGACTATCACAGTTATCTTGCTAGCTGTGGCGTCGATGGAGTCAAAGTAGATGTCCAAAATTTGATAGAAACATTAGGTTCAGGGTACGGTGGACGTGTTTCATTAACAAAACGGCATCAAGAAGCATTAGAGACATCAATAGCAAGGAACTTTGAGCACAATAACCTCATTTGTTGCATGTCTCACAACTCTGATTCAATTTACAGTTCAAAGAAGAGTGCAGTAGCAAGAGCATCTGAGGATTTCATGCCAAGGGAACCAACATTTCAAACCTTACATGTTGCGTCAGTAGCTTTTAACAGTCTTCTTCTGGGAGAGATATTTGTGCCAGACTGGGACATGTTCCAAAGCAAGCACGAGACGGCTGAGTTCCATGCTGCAGCAAGAGCAATAGGTGGTTGTGCAGTACATTACAGTGATAAGCCTGGCAATCATGATTTTAAAATCTTGAAGAAGCTAGTACTACCAAATGGATCAGTCTTGAGAGCAAGATATGCTGGCCGTCCTACTCGAGATTGTTTGTTTCAAGATCCAGTAATGGATGGTAAAAGTCTGCTGAAAATTTGGAACTTGAATAAGCTGACTGGGGTGATAGGCGTCTTTAATTGCCAAGGAGCAGGAAGCTGGCCAATGAAACCATCGGAAACCACACCGACACACTTAACCATTTCAGGAAAAGTTAAACCACTTGATGTTGAGTTTCTTCAAGAGGTTGCTGGCTTGCTTTCCAAGCTGCCTAGTAGAGGAAAATTAGAAGTATCCTTGGAGACTCTTCAATGTGAAGTATATACAGTATCTCCAATCAGGGTATTTGGTCATCATATGCAATTTGCGCCAATTGGATTGCTTGACATGTACAATTCAGGAGGAGCTGTAGAAGAATTGTCCTGCATAAGGGATGCTGCAAATTGCACAATAGTAAACATCAAAGGCAGAGGATGTGGCCGATTTGGAGCGTACTCCAATGTTAGACCGAAAAGTTGCTTGGTGGACATGCAGGAGGAGGAGTTTTCCTACAACTCTGAAGATGGATTACTGACCATTAAACTTGATGGTGAAGGCAACTCAAGGGACATAGAATTTGTATTCTGA

Protein sequence

>Msa0370910

MNKILSLPYKLTNLLPPHLKLYNSSYINLPNKFNYPLTFSTSFLCSYSVTSLNFVHSLSTNMTISVVPKVKDDCLMVRGNVILTNVPQNIVVSPVSAGSAFLGATSPIPSSRHVFTLGTLRGYRLLSLFRVKIWWMIPRVGKSASDVPMETQLLLVEAREESALKTGFSSDSEETEEENTSYILFLPVLDGAFRATLQGTALNELQFCVESGDAYVQTSQSLEAVFVNSGDNPFKLIKDSIKILEKHKGTFCHLENKETPVHLDLFGWCTWDAFYTKVNPQGIKEGIQSLSSGGFTPKFIIVDDGWQETYNEFFKEGEPIIEGTQFATRLIDIKENLKFRSDGSNSSCNNLHDFIDSIKQNLSVKYVYMWHALAGYWGGVLPSSNATKKYNPKLVYPIQSAGSTGNLRDIAMDSLEKYGVGMIDPSKFYDFYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKRHQEALETSIARNFEHNNLICCMSHNSDSIYSSKKSAVARASEDFMPREPTFQTLHVASVAFNSLLLGEIFVPDWDMFQSKHETAEFHAAARAIGGCAVHYSDKPGNHDFKILKKLVLPNGSVLRARYAGRPTRDCLFQDPVMDGKSLLKIWNLNKLTGVIGVFNCQGAGSWPMKPSETTPTHLTISGKVKPLDVEFLQEVAGLLSKLPSRGKLEVSLETLQCEVYTVSPIRVFGHHMQFAPIGLLDMYNSGGAVEELSCIRDAANCTIVNIKGRGCGRFGAYSNVRPKSCLVDMQEEEFSYNSEDGLLTIKLDGEGNSRDIEFVF*