Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129420 | XP_003626454.1 | 97.442 | 391 | 8 | 2 | 1 | 391 | 1 | 389 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129420 | sp|Q99090|CPRF2_PETCR | 51.106 | 407 | 160 | 13 | 1 | 386 | 1 | 389 | 2.43e-108 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129420 | G7L1X5 | 97.442 | 391 | 8 | 2 | 1 | 391 | 1 | 389 | 0.0 | 771 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1129420 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046950 | Msa1129420 | 0.994230 | 1.388823e-205 | -8.615850e-47 |
| Msa0052780 | Msa1129420 | 0.810615 | 1.055702e-50 | -8.615850e-47 |
| Msa0053640 | Msa1129420 | 0.840938 | 6.432355e-58 | -8.615850e-47 |
| Msa0076640 | Msa1129420 | 0.803241 | 3.830202e-49 | -8.615850e-47 |
| Msa0097570 | Msa1129420 | 0.816051 | 6.749458e-52 | -8.615850e-47 |
| Msa0099260 | Msa1129420 | 0.841595 | 4.319644e-58 | -8.615850e-47 |
| Msa0683200 | Msa1129420 | -0.805360 | 1.385833e-49 | -8.615850e-47 |
| Msa0689300 | Msa1129420 | 0.834081 | 3.683520e-56 | -8.615850e-47 |
| Msa0838640 | Msa1129420 | 0.821066 | 4.918038e-53 | -8.615850e-47 |
| Msa0838650 | Msa1129420 | 0.823595 | 1.272479e-53 | -8.615850e-47 |
| Msa0145430 | Msa1129420 | 0.803515 | 3.359757e-49 | -8.615850e-47 |
| Msa0148040 | Msa1129420 | 0.835262 | 1.858953e-56 | -8.615850e-47 |
| Msa0224210 | Msa1129420 | 0.810547 | 1.091743e-50 | -8.615850e-47 |
| Msa0233920 | Msa1129420 | 0.906293 | 1.732502e-80 | -8.615850e-47 |
| Msa0370910 | Msa1129420 | 0.806007 | 1.013865e-49 | -8.615850e-47 |
| Msa0390790 | Msa1129420 | 0.813931 | 1.993638e-51 | -8.615850e-47 |
| Msa0403750 | Msa1129420 | 0.869547 | 2.853106e-66 | -8.615850e-47 |
| Msa0403790 | Msa1129420 | 0.841273 | 5.251925e-58 | -8.615850e-47 |
| Msa0403860 | Msa1129420 | 0.866197 | 3.399924e-65 | -8.615850e-47 |
| Msa0460760 | Msa1129420 | 0.858117 | 1.026529e-62 | -8.615850e-47 |
| Msa0464850 | Msa1129420 | 0.812638 | 3.833880e-51 | -8.615850e-47 |
| Msa0481310 | Msa1129420 | 0.808847 | 2.532061e-50 | -8.615850e-47 |
| Msa0982340 | Msa1129420 | 0.806070 | 9.832866e-50 | -8.615850e-47 |
| Msa0982550 | Msa1129420 | 0.831754 | 1.395588e-55 | -8.615850e-47 |
| Msa1038350 | Msa1129420 | 0.870673 | 1.221522e-66 | -8.615850e-47 |
| Msa1087890 | Msa1129420 | 0.908322 | 1.940917e-81 | -8.615850e-47 |
| Msa0265480 | Msa1129420 | 0.808133 | 3.596703e-50 | -8.615850e-47 |
| Msa0310730 | Msa1129420 | -0.804638 | 1.962262e-49 | -8.615850e-47 |
| Msa0312640 | Msa1129420 | 0.864347 | 1.298367e-64 | -8.615850e-47 |
| Msa0340370 | Msa1129420 | 0.824139 | 9.490206e-54 | -8.615850e-47 |
| Msa1127260 | Msa1129420 | 0.815282 | 1.001360e-51 | -8.615850e-47 |
| Msa1129420 | Msa1173150 | 0.814757 | 1.309552e-51 | -8.615850e-47 |
| Msa1129420 | Msa1312770 | 0.809943 | 1.474039e-50 | -8.615850e-47 |
| Msa1129420 | Msa1352920 | 0.806521 | 7.901417e-50 | -8.615850e-47 |
| Msa1129420 | Msa1370420 | 0.803172 | 3.956924e-49 | -8.615850e-47 |
| Msa1129420 | Msa1385970 | 0.915151 | 8.270786e-85 | -8.615850e-47 |
| Msa1129420 | Msa1402350 | 0.801639 | 8.190358e-49 | -8.615850e-47 |
| Msa1129420 | Msa1417110 | 0.914919 | 1.088520e-84 | -8.615850e-47 |
| Msa1129420 | Msa1441330 | 0.835324 | 1.793544e-56 | -8.615850e-47 |
| Msa1129420 | Msa1443220 | 0.872070 | 4.218922e-67 | -8.615850e-47 |
| Msa0484400 | Msa1129420 | 0.832871 | 7.382256e-56 | -8.615850e-47 |
| Msa0510520 | Msa1129420 | 0.843719 | 1.178842e-58 | -8.615850e-47 |
| Msa0573950 | Msa1129420 | 0.828721 | 7.681258e-55 | -8.615850e-47 |
| Msa0576560 | Msa1129420 | 0.824789 | 6.670906e-54 | -8.615850e-47 |
| Msa0577640 | Msa1129420 | 0.844438 | 7.560542e-59 | -8.615850e-47 |
| Msa0577730 | Msa1129420 | 0.860605 | 1.838836e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129420 | MtrunA17_Chr7g0274141 | 97.442 | 391 | 8 | 2 | 1 | 391 | 1 | 389 | 0.0 | 771 |
| Msa1129420 | MtrunA17_Chr1g0190761 | 56.543 | 405 | 153 | 10 | 1 | 387 | 1 | 400 | 2.40e-131 | 383 |
| Msa1129420 | MtrunA17_Chr3g0139301 | 52.899 | 138 | 58 | 3 | 151 | 281 | 76 | 213 | 4.53e-31 | 120 |
| Msa1129420 | MtrunA17_Chr1g0147491 | 58.333 | 120 | 45 | 2 | 170 | 286 | 142 | 259 | 2.94e-25 | 105 |
| Msa1129420 | MtrunA17_Chr3g0139571 | 58.904 | 73 | 30 | 0 | 196 | 268 | 2 | 74 | 2.80e-17 | 76.3 |
| Msa1129420 | MtrunA17_Chr4g0035414 | 40.000 | 115 | 59 | 1 | 173 | 287 | 17 | 121 | 2.76e-16 | 75.9 |
| Msa1129420 | MtrunA17_Chr3g0144941 | 39.785 | 93 | 56 | 0 | 193 | 285 | 27 | 119 | 1.09e-14 | 71.2 |
| Msa1129420 | MtrunA17_Chr8g0341311 | 40.816 | 98 | 53 | 1 | 171 | 268 | 54 | 146 | 5.89e-14 | 69.7 |
| Msa1129420 | MtrunA17_Chr7g0225661 | 40.816 | 98 | 53 | 1 | 171 | 268 | 64 | 156 | 8.76e-14 | 69.7 |
| Msa1129420 | MtrunA17_Chr8g0378901 | 35.238 | 105 | 68 | 0 | 181 | 285 | 20 | 124 | 9.40e-14 | 68.6 |
| Msa1129420 | MtrunA17_Chr6g0456061 | 47.297 | 74 | 39 | 0 | 196 | 269 | 90 | 163 | 6.42e-13 | 67.4 |
| Msa1129420 | MtrunA17_Chr1g0155551 | 29.747 | 158 | 88 | 3 | 165 | 309 | 9 | 156 | 1.88e-12 | 65.1 |
| Msa1129420 | MtrunA17_Chr7g0220571 | 42.857 | 91 | 44 | 1 | 178 | 268 | 77 | 159 | 3.33e-11 | 62.0 |
| Msa1129420 | MtrunA17_Chr4g0054291 | 32.895 | 152 | 87 | 5 | 121 | 268 | 7 | 147 | 7.72e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129420 | AT5G28770.2 | 45.501 | 389 | 127 | 14 | 1 | 384 | 1 | 309 | 5.61e-72 | 228 |
| Msa1129420 | AT5G28770.1 | 45.195 | 385 | 127 | 14 | 1 | 384 | 1 | 302 | 7.86e-68 | 217 |
| Msa1129420 | AT5G28770.3 | 47.810 | 274 | 90 | 9 | 1 | 269 | 1 | 226 | 2.01e-53 | 178 |
| Msa1129420 | AT4G02640.3 | 37.615 | 327 | 147 | 8 | 1 | 285 | 1 | 312 | 1.98e-39 | 145 |
| Msa1129420 | AT4G02640.2 | 37.615 | 327 | 147 | 8 | 1 | 285 | 1 | 312 | 2.34e-39 | 145 |
| Msa1129420 | AT4G02640.4 | 37.072 | 321 | 151 | 7 | 1 | 285 | 1 | 306 | 6.19e-39 | 144 |
| Msa1129420 | AT4G02640.1 | 37.072 | 321 | 151 | 7 | 1 | 285 | 1 | 306 | 6.77e-39 | 144 |
| Msa1129420 | AT3G54620.1 | 34.293 | 382 | 162 | 14 | 1 | 325 | 1 | 350 | 1.67e-37 | 140 |
| Msa1129420 | AT5G24800.1 | 55.814 | 129 | 47 | 4 | 158 | 277 | 76 | 203 | 7.64e-35 | 130 |
| Msa1129420 | AT5G28770.4 | 43.404 | 235 | 80 | 9 | 1 | 230 | 1 | 187 | 6.58e-31 | 118 |
| Msa1129420 | AT3G54620.3 | 32.723 | 382 | 151 | 16 | 1 | 325 | 1 | 333 | 2.33e-25 | 106 |
| Msa1129420 | AT3G30530.1 | 39.796 | 98 | 56 | 1 | 171 | 268 | 59 | 153 | 5.45e-13 | 67.4 |
| Msa1129420 | AT2G04038.1 | 42.857 | 98 | 51 | 1 | 171 | 268 | 54 | 146 | 8.86e-13 | 66.2 |
| Msa1129420 | AT1G75390.1 | 37.963 | 108 | 62 | 1 | 194 | 301 | 39 | 141 | 1.03e-12 | 66.2 |
| Msa1129420 | AT2G18160.1 | 39.759 | 83 | 50 | 0 | 193 | 275 | 28 | 110 | 1.87e-12 | 65.5 |
| Msa1129420 | AT1G13600.1 | 38.776 | 98 | 54 | 1 | 171 | 268 | 67 | 158 | 2.04e-11 | 63.2 |
| Msa1129420 | AT5G15830.1 | 45.545 | 101 | 44 | 4 | 170 | 268 | 55 | 146 | 9.79e-11 | 60.8 |
Find 91 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGCTTCCCGATCTATTAT+TGG | 0.211521 | 7_3:-81394311 | None:intergenic |
| CTTTCAGGATGCTCTCTAAT+AGG | 0.224164 | 7_3:+81393420 | Msa1129420:intron |
| TATGTAGAATGCGGCCCTTC+TGG | 0.245369 | 7_3:+81392864 | Msa1129420:intron |
| CTGAAATAACGGAGCAATAT+TGG | 0.250912 | 7_3:+81391587 | Msa1129420:CDS |
| TATTGATTCTGAGGATTATC+AGG | 0.285549 | 7_3:+81391807 | Msa1129420:CDS |
| ATTGTAACAGCAGGTTTCTT+TGG | 0.288769 | 7_3:-81392948 | None:intergenic |
| GAGACAGTTAAAAGATTTAC+TGG | 0.291659 | 7_3:+81394112 | Msa1129420:CDS |
| ATATGTTCCAAACATGCTTC+TGG | 0.308555 | 7_3:-81394655 | None:intergenic |
| CTCATGGCAATAGGGATCTT+TGG | 0.341962 | 7_3:+81392633 | Msa1129420:intron |
| AATTCTCCCAGAAGCATGTT+TGG | 0.344998 | 7_3:+81394648 | Msa1129420:three_prime_UTR |
| AATTCCTGGAGATAGGAATT+AGG | 0.346220 | 7_3:+81394599 | Msa1129420:three_prime_UTR |
| CCATCTTATCCTTCTGAACT+TGG | 0.355060 | 7_3:+81392688 | Msa1129420:CDS |
| CCTGCCACGGGTGGCTAGCT+TGG | 0.382757 | 7_3:+81394402 | Msa1129420:CDS |
| AAGATATCAAAGTTGCTGTT+GGG | 0.385646 | 7_3:+81392913 | Msa1129420:CDS |
| GACATTAGATTATTAGATAA+GGG | 0.396715 | 7_3:-81394268 | None:intergenic |
| TTTCAGGATGCTCTCTAATA+GGG | 0.402739 | 7_3:+81393421 | Msa1129420:intron |
| TCCTTCTGAACTTGGACCTC+TGG | 0.404582 | 7_3:+81392696 | Msa1129420:CDS |
| ATTCTATCACTTGTCTTCTT+CGG | 0.406886 | 7_3:-81394455 | None:intergenic |
| GCTCAAAAGTCAACAAGAAT+AGG | 0.417159 | 7_3:-81394552 | None:intergenic |
| TATTAGGTCTCTGAATTAAG+AGG | 0.422615 | 7_3:+81393611 | Msa1129420:intron |
| CTTAGATTAATTAGATATGA+TGG | 0.427179 | 7_3:+81394760 | Msa1129420:three_prime_UTR |
| CCAAGCTAGCCACCCGTGGC+AGG | 0.428000 | 7_3:-81394402 | None:intergenic |
| GTTGAAGTTGAAGATGAAGA+AGG | 0.442163 | 7_3:-81391736 | None:intergenic |
| GCAGCAGGTGGGAACAAGAT+AGG | 0.452428 | 7_3:+81394367 | Msa1129420:CDS |
| ATGGGAATGTCATTATTTGA+TGG | 0.455802 | 7_3:+81394175 | Msa1129420:CDS |
| GATGGCTGTGATCCATTGTC+AGG | 0.464580 | 7_3:-81392670 | None:intergenic |
| GAGATACAACAAAGATGAAT+CGG | 0.465070 | 7_3:+81391635 | Msa1129420:CDS |
| TATGTTCCAAACATGCTTCT+GGG | 0.465520 | 7_3:-81394654 | None:intergenic |
| GGGATCTTTGGTCAAATCTC+AGG | 0.465850 | 7_3:+81392645 | Msa1129420:intron |
| GGACATTAGATTATTAGATA+AGG | 0.466925 | 7_3:-81394269 | None:intergenic |
| CTGGGAAAATTCCTGGAGAT+AGG | 0.474134 | 7_3:+81394592 | Msa1129420:three_prime_UTR |
| AAAGATATCAAAGTTGCTGT+TGG | 0.482051 | 7_3:+81392912 | Msa1129420:CDS |
| GAGGGAGAGATTAATATGAA+TGG | 0.483459 | 7_3:+81393011 | Msa1129420:CDS |
| GGACCTCTGGCTACTTTGAA+AGG | 0.489971 | 7_3:+81392709 | Msa1129420:CDS |
| AATGTCTGAGGTATCATCAA+TGG | 0.491343 | 7_3:+81394156 | Msa1129420:CDS |
| GGCGCAAGCAAGATCAAGCT+TGG | 0.492090 | 7_3:-81391842 | None:intergenic |
| TCTGTGCTATTTGAAAGTTT+AGG | 0.498965 | 7_3:+81394529 | Msa1129420:three_prime_UTR |
| GTTATCAATTGCTGAAATAA+CGG | 0.504761 | 7_3:+81391576 | Msa1129420:CDS |
| GCAGGTTTCTTTGGCATGCA+AGG | 0.507308 | 7_3:-81392939 | None:intergenic |
| ATGTCTGAGGTATCATCAAT+GGG | 0.509553 | 7_3:+81394157 | Msa1129420:CDS |
| TTATTTGGATCTTCTTGCAC+AGG | 0.510884 | 7_3:-81394232 | None:intergenic |
| CTATCCTAATTCCTATCTCC+AGG | 0.511568 | 7_3:-81394603 | None:intergenic |
| AGAGGAGCCAATAATAGATC+GGG | 0.512572 | 7_3:+81394304 | Msa1129420:CDS |
| CAGAAGAACACCGCAGCAGG+TGG | 0.514294 | 7_3:+81394355 | Msa1129420:CDS |
| GCGCCGCCGTCGCTAAGTCG+AGG | 0.516197 | 7_3:+81391860 | Msa1129420:CDS |
| CGCCGCCGTCGCTAAGTCGA+GGG | 0.517985 | 7_3:+81391861 | Msa1129420:CDS |
| GAGAGGAGCCAATAATAGAT+CGG | 0.524926 | 7_3:+81394303 | Msa1129420:CDS |
| GTTGACTTCGAAAGCGTGCA+AGG | 0.526678 | 7_3:+81391609 | Msa1129420:CDS |
| GAATCGGAGTGATTCAGAAT+GGG | 0.529997 | 7_3:+81391651 | Msa1129420:CDS |
| GGCTCCTCTCATATCATGAC+TGG | 0.535600 | 7_3:-81394290 | None:intergenic |
| GTGCAGAAGAACACCGCAGC+AGG | 0.536590 | 7_3:+81394352 | Msa1129420:CDS |
| CCAAGTTCAGAAGGATAAGA+TGG | 0.536978 | 7_3:-81392688 | None:intergenic |
| CAATAATAGTATTGATTCTG+AGG | 0.537078 | 7_3:+81391798 | Msa1129420:CDS |
| TAGGAATTAGGATAGCCAAT+AGG | 0.537249 | 7_3:+81394611 | Msa1129420:three_prime_UTR |
| AGATATCAAAGTTGCTGTTG+GGG | 0.538293 | 7_3:+81392914 | Msa1129420:CDS |
| ACAATCAAGTCAACAACAAG+TGG | 0.544242 | 7_3:+81392966 | Msa1129420:CDS |
| TGAATCGGAGTGATTCAGAA+TGG | 0.545437 | 7_3:+81391650 | Msa1129420:CDS |
| GCCAGAGGTCCAAGTTCAGA+AGG | 0.550767 | 7_3:-81392697 | None:intergenic |
| CATCTTCAGAGTCGAATTCG+TGG | 0.551475 | 7_3:+81394427 | Msa1129420:CDS |
| AACAAATTCCCTGCCACGGG+TGG | 0.555330 | 7_3:+81394393 | Msa1129420:CDS |
| AAGATTTACTGGATCGAACC+CGG | 0.558877 | 7_3:+81394123 | Msa1129420:CDS |
| CAAGCTAGCCACCCGTGGCA+GGG | 0.562427 | 7_3:-81394401 | None:intergenic |
| TCTAAGTTACACATCAGTCA+TGG | 0.569320 | 7_3:-81394743 | None:intergenic |
| TCTTCGTCTTGAGCGTCTAG+CGG | 0.573008 | 7_3:-81393447 | None:intergenic |
| CAGACATTGCATTAAACACC+GGG | 0.574406 | 7_3:-81394141 | None:intergenic |
| TAGATGGATCGTTTCCAGAA+GGG | 0.575636 | 7_3:-81392878 | None:intergenic |
| ATCAGACGATGAGGAAGCTG+AGG | 0.576946 | 7_3:+81392992 | Msa1129420:CDS |
| TTTAACTGAGCTTGAAACAC+AGG | 0.587276 | 7_3:+81393481 | Msa1129420:CDS |
| GTTGACTTGATTGTAACAGC+AGG | 0.587759 | 7_3:-81392957 | None:intergenic |
| ACGAACAAATTCCCTGCCAC+GGG | 0.590000 | 7_3:+81394390 | Msa1129420:CDS |
| TTAGATGGATCGTTTCCAGA+AGG | 0.592645 | 7_3:-81392879 | None:intergenic |
| ACTTCGAAAGCGTGCAAGGG+AGG | 0.597046 | 7_3:+81391613 | Msa1129420:CDS |
| TCAGACATTGCATTAAACAC+CGG | 0.598502 | 7_3:-81394142 | None:intergenic |
| AAATCTCAGGATCCTGACAA+TGG | 0.601386 | 7_3:+81392658 | Msa1129420:CDS |
| GACGAACAAATTCCCTGCCA+CGG | 0.607260 | 7_3:+81394389 | Msa1129420:CDS |
| TGTTGAAACATTAAGAGCAA+AGG | 0.611502 | 7_3:+81393721 | Msa1129420:CDS |
| TATCTTGTTCCCACCTGCTG+CGG | 0.616019 | 7_3:-81394365 | None:intergenic |
| GCATCAGCTGATGACTCAGA+AGG | 0.620005 | 7_3:-81394202 | None:intergenic |
| TTGACTTCGAAAGCGTGCAA+GGG | 0.621528 | 7_3:+81391610 | Msa1129420:CDS |
| CTGATGCAAAACGAGTAAGA+AGG | 0.628581 | 7_3:+81393045 | Msa1129420:CDS |
| TTTGAGATTGACATCAACGG+TGG | 0.645017 | 7_3:-81391773 | None:intergenic |
| TCAGACGATGAGGAAGCTGA+GGG | 0.659901 | 7_3:+81392993 | Msa1129420:CDS |
| ATGTCCAGTCATGATATGAG+AGG | 0.664118 | 7_3:+81394286 | Msa1129420:CDS |
| GGTGTTTAATGCAATGTCTG+AGG | 0.664829 | 7_3:+81394144 | Msa1129420:CDS |
| AGAAGAACACCGCAGCAGGT+GGG | 0.666761 | 7_3:+81394356 | Msa1129420:CDS |
| AAGTGGATCATCAGACGATG+AGG | 0.668470 | 7_3:+81392983 | Msa1129420:CDS |
| TGTTCCAAGCTAGCCACCCG+TGG | 0.670248 | 7_3:-81394406 | None:intergenic |
| TACCCTCGACTTAGCGACGG+CGG | 0.681240 | 7_3:-81391863 | None:intergenic |
| AAACCTTTCAAAGTAGCCAG+AGG | 0.696494 | 7_3:-81392712 | None:intergenic |
| ATATACCCTCGACTTAGCGA+CGG | 0.708838 | 7_3:-81391866 | None:intergenic |
| CTTCAGAGTCGAATTCGTGG+TGG | 0.718456 | 7_3:+81394430 | Msa1129420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAATGCA+TGG | - | chr7_3:81391929-81391948 | None:intergenic | 10.0% |
| !! | ATATAATATTCTATCTTATT+AGG | + | chr7_3:81393595-81393614 | Msa1129420:intron | 10.0% |
| !! | TAGTAAATTAAATTGTATCA+GGG | - | chr7_3:81391964-81391983 | None:intergenic | 15.0% |
| !! | ATAGTAAATTAAATTGTATC+AGG | - | chr7_3:81391965-81391984 | None:intergenic | 15.0% |
| !!! | TATATAGCTTTTGAATATTA+CGG | - | chr7_3:81392102-81392121 | None:intergenic | 15.0% |
| !!! | TCTTTATTTTGTAATTTAGA+TGG | - | chr7_3:81392897-81392916 | None:intergenic | 15.0% |
| !!! | ATAAGTTATTTCTATAATCA+AGG | - | chr7_3:81393312-81393331 | None:intergenic | 15.0% |
| !! | TGTATAAAATACTTAATTCA+GGG | - | chr7_3:81393372-81393391 | None:intergenic | 15.0% |
| !! | TTGTATAAAATACTTAATTC+AGG | - | chr7_3:81393373-81393392 | None:intergenic | 15.0% |
| !! | AAAAATGAGAACAATATAAA+GGG | - | chr7_3:81394074-81394093 | None:intergenic | 15.0% |
| !! | TAAAAATGAGAACAATATAA+AGG | - | chr7_3:81394075-81394094 | None:intergenic | 15.0% |
| !!! | TTATATTGTTCTCATTTTTA+AGG | + | chr7_3:81394075-81394094 | Msa1129420:intron | 15.0% |
| !!! | ACTATATATTTTTTTGTGTG+TGG | + | chr7_3:81391980-81391999 | Msa1129420:intron | 20.0% |
| !! | TTAATTCTGTCAACATATAT+GGG | - | chr7_3:81392266-81392285 | None:intergenic | 20.0% |
| !! | TTTAATTCTGTCAACATATA+TGG | - | chr7_3:81392267-81392286 | None:intergenic | 20.0% |
| !!! | TAGTAGATCACAATTTTTTA+AGG | + | chr7_3:81392813-81392832 | Msa1129420:intron | 20.0% |
| !!! | AGTAGATCACAATTTTTTAA+GGG | + | chr7_3:81392814-81392833 | Msa1129420:intron | 20.0% |
| !!! | TTTTATTCATATGTAGAATG+CGG | + | chr7_3:81392855-81392874 | Msa1129420:intron | 20.0% |
| !! | AAACTATAATAGAGATTTCA+CGG | - | chr7_3:81393241-81393260 | None:intergenic | 20.0% |
| !! | GACATTAGATTATTAGATAA+GGG | - | chr7_3:81394271-81394290 | None:intergenic | 20.0% |
| !!! | CTAGTCTAATTTTTTTAACT+GGG | + | chr7_3:81394574-81394593 | Msa1129420:three_prime_UTR | 20.0% |
| !! | CTTAGATTAATTAGATATGA+TGG | + | chr7_3:81394760-81394779 | Msa1129420:three_prime_UTR | 20.0% |
| ! | GTTATCAATTGCTGAAATAA+CGG | + | chr7_3:81391576-81391595 | Msa1129420:CDS | 25.0% |
| !!! | CAATAATAGTATTGATTCTG+AGG | + | chr7_3:81391798-81391817 | Msa1129420:CDS | 25.0% |
| ! | TAGAATTATTCATCATCCAA+TGG | + | chr7_3:81392368-81392387 | Msa1129420:intron | 25.0% |
| !!! | TAGTTTTGATTCTTCAAAGT+TGG | + | chr7_3:81392539-81392558 | Msa1129420:intron | 25.0% |
| !! | ATGTTTTCTTTTACTACTCA+TGG | + | chr7_3:81392617-81392636 | Msa1129420:intron | 25.0% |
| ! | AAACATGGTAAATACATTGA+AGG | + | chr7_3:81392785-81392804 | Msa1129420:intron | 25.0% |
| ! | TCAAATTAGTCAATCTAAAC+AGG | - | chr7_3:81393131-81393150 | None:intergenic | 25.0% |
| ! | AACACTTGAGAAATTATTTG+AGG | + | chr7_3:81393168-81393187 | Msa1129420:intron | 25.0% |
| ! | ACACTTGAGAAATTATTTGA+GGG | + | chr7_3:81393169-81393188 | Msa1129420:intron | 25.0% |
| ! | AACTATAATAGAGATTTCAC+GGG | - | chr7_3:81393240-81393259 | None:intergenic | 25.0% |
| ! | ATTTGAACGACTAATTAAGA+TGG | - | chr7_3:81393565-81393584 | None:intergenic | 25.0% |
| !! | AGCAGAATTGTTGAATTTTT+GGG | - | chr7_3:81393675-81393694 | None:intergenic | 25.0% |
| ! | AACTACTTTACTAGTAAAAC+TGG | + | chr7_3:81393758-81393777 | Msa1129420:intron | 25.0% |
| ! | ACACATAAATCAATTGGAAA+TGG | - | chr7_3:81394021-81394040 | None:intergenic | 25.0% |
| !! | TCCAATTGATTTATGTGTAT+TGG | + | chr7_3:81394023-81394042 | Msa1129420:intron | 25.0% |
| ! | GGTTGAAAAAAGTGATTATT+TGG | - | chr7_3:81394250-81394269 | None:intergenic | 25.0% |
| ! | GGACATTAGATTATTAGATA+AGG | - | chr7_3:81394272-81394291 | None:intergenic | 25.0% |
| !!! | GCTAGTCTAATTTTTTTAAC+TGG | + | chr7_3:81394573-81394592 | Msa1129420:three_prime_UTR | 25.0% |
| ! | TATATGCTGCTATTCTTTTC+TGG | - | chr7_3:81391510-81391529 | None:intergenic | 30.0% |
| GAGATACAACAAAGATGAAT+CGG | + | chr7_3:81391635-81391654 | Msa1129420:CDS | 30.0% | |
| ! | GTTGTTCACGTAAAAACTTT+TGG | - | chr7_3:81391681-81391700 | None:intergenic | 30.0% |
| !!! | GATTTTGAGATTGACATCAA+CGG | - | chr7_3:81391779-81391798 | None:intergenic | 30.0% |
| !! | TATTGATTCTGAGGATTATC+AGG | + | chr7_3:81391807-81391826 | Msa1129420:CDS | 30.0% |
| ! | GTGTGCATATGTTAATCTTT+TGG | - | chr7_3:81392032-81392051 | None:intergenic | 30.0% |
| ! | CACAATTTTACGTGTATGTT+TGG | + | chr7_3:81392049-81392068 | Msa1129420:intron | 30.0% |
| TACGTGTATGTTTGGATATT+CGG | + | chr7_3:81392057-81392076 | Msa1129420:intron | 30.0% | |
| ! | ATAGCTTTTGAATATTACGG+TGG | - | chr7_3:81392099-81392118 | None:intergenic | 30.0% |
| !! | ATTAATTTGCGAAATTGGGA+TGG | + | chr7_3:81392186-81392205 | Msa1129420:intron | 30.0% |
| ATGTGACTTTGGTAAAATCA+CGG | - | chr7_3:81392216-81392235 | None:intergenic | 30.0% | |
| GTTTATTATCGATGTGACTT+TGG | - | chr7_3:81392227-81392246 | None:intergenic | 30.0% | |
| TAATTAACAAGCACTCCTTT+GGG | - | chr7_3:81392467-81392486 | None:intergenic | 30.0% | |
| ! | TTTTACTACTCATGGCAATA+GGG | + | chr7_3:81392625-81392644 | Msa1129420:intron | 30.0% |
| TGGTAAATACATTGAAGGAA+AGG | + | chr7_3:81392790-81392809 | Msa1129420:intron | 30.0% | |
| AAAGATATCAAAGTTGCTGT+TGG | + | chr7_3:81392912-81392931 | Msa1129420:CDS | 30.0% | |
| ! | AAGATATCAAAGTTGCTGTT+GGG | + | chr7_3:81392913-81392932 | Msa1129420:CDS | 30.0% |
| TATTAGGTCTCTGAATTAAG+AGG | + | chr7_3:81393611-81393630 | Msa1129420:intron | 30.0% | |
| ! | CAGCAGAATTGTTGAATTTT+TGG | - | chr7_3:81393676-81393695 | None:intergenic | 30.0% |
| TGTTGAAACATTAAGAGCAA+AGG | + | chr7_3:81393721-81393740 | Msa1129420:CDS | 30.0% | |
| AAAATCTTGATCCAAGTAGT+AGG | - | chr7_3:81393793-81393812 | None:intergenic | 30.0% | |
| GCCAATACACATAAATCAAT+TGG | - | chr7_3:81394027-81394046 | None:intergenic | 30.0% | |
| !!! | TCTCATTTTTAAGGTGAAGA+TGG | + | chr7_3:81394084-81394103 | Msa1129420:intron | 30.0% |
| GAGACAGTTAAAAGATTTAC+TGG | + | chr7_3:81394112-81394131 | Msa1129420:CDS | 30.0% | |
| ATGGGAATGTCATTATTTGA+TGG | + | chr7_3:81394175-81394194 | Msa1129420:CDS | 30.0% | |
| ATTCTATCACTTGTCTTCTT+CGG | - | chr7_3:81394458-81394477 | None:intergenic | 30.0% | |
| !! | TCTGTGCTATTTGAAAGTTT+AGG | + | chr7_3:81394529-81394548 | Msa1129420:three_prime_UTR | 30.0% |
| !! | TTTTTAACTGGGAAAATTCC+TGG | + | chr7_3:81394585-81394604 | Msa1129420:three_prime_UTR | 30.0% |
| !!! | TTGTTTCTTTTAAGGCCTAT+TGG | - | chr7_3:81394629-81394648 | None:intergenic | 30.0% |
| !! | GGGAGAATTTGTTTCTTTTA+AGG | - | chr7_3:81394637-81394656 | None:intergenic | 30.0% |
| ! | CTGAAATAACGGAGCAATAT+TGG | + | chr7_3:81391587-81391606 | Msa1129420:CDS | 35.0% |
| GTTGAAGTTGAAGATGAAGA+AGG | - | chr7_3:81391739-81391758 | None:intergenic | 35.0% | |
| TGGATATTCGGTCAAAATCA+CGG | + | chr7_3:81392069-81392088 | Msa1129420:intron | 35.0% | |
| AAACATGCACAAAATCACGA+TGG | - | chr7_3:81392153-81392172 | None:intergenic | 35.0% | |
| GTGCATGTTTGATATTACAG+CGG | + | chr7_3:81392163-81392182 | Msa1129420:intron | 35.0% | |
| !! | AGCGGATTAATTTGCGAAAT+TGG | + | chr7_3:81392181-81392200 | Msa1129420:intron | 35.0% |
| !! | GCGGATTAATTTGCGAAATT+GGG | + | chr7_3:81392182-81392201 | Msa1129420:intron | 35.0% |
| AAGCTTAGATGAAAACCTAG+TGG | - | chr7_3:81392409-81392428 | None:intergenic | 35.0% | |
| !! | CCTTTGGGTTGATAATTGTT+TGG | - | chr7_3:81392452-81392471 | None:intergenic | 35.0% |
| CCAAACAATTATCAACCCAA+AGG | + | chr7_3:81392449-81392468 | Msa1129420:intron | 35.0% | |
| CTAATTAACAAGCACTCCTT+TGG | - | chr7_3:81392468-81392487 | None:intergenic | 35.0% | |
| ! | CTTTTACTACTCATGGCAAT+AGG | + | chr7_3:81392624-81392643 | Msa1129420:intron | 35.0% |
| TGTCTGCATATGTGAAAACA+TGG | + | chr7_3:81392770-81392789 | Msa1129420:intron | 35.0% | |
| ! | AGATATCAAAGTTGCTGTTG+GGG | + | chr7_3:81392914-81392933 | Msa1129420:CDS | 35.0% |
| ATTGTAACAGCAGGTTTCTT+TGG | - | chr7_3:81392951-81392970 | None:intergenic | 35.0% | |
| ACAATCAAGTCAACAACAAG+TGG | + | chr7_3:81392966-81392985 | Msa1129420:CDS | 35.0% | |
| GAGGGAGAGATTAATATGAA+TGG | + | chr7_3:81393011-81393030 | Msa1129420:CDS | 35.0% | |
| ! | TTACTCGTTTTGCATCAGTA+GGG | - | chr7_3:81393043-81393062 | None:intergenic | 35.0% |
| ! | GTTTTGCACAAGAAATCTTC+TGG | + | chr7_3:81393078-81393097 | Msa1129420:intron | 35.0% |
| AAATTATTTGAGGGAGATCG+TGG | + | chr7_3:81393178-81393197 | Msa1129420:intron | 35.0% | |
| TTTCAGGATGCTCTCTAATA+GGG | + | chr7_3:81393421-81393440 | Msa1129420:intron | 35.0% | |
| TTTAACTGAGCTTGAAACAC+AGG | + | chr7_3:81393481-81393500 | Msa1129420:CDS | 35.0% | |
| AGAAGAGAATGCAGAAGAAA+TGG | - | chr7_3:81393529-81393548 | None:intergenic | 35.0% | |
| AGTTTACACAGTCAGTACAT+CGG | + | chr7_3:81393832-81393851 | Msa1129420:intron | 35.0% | |
| GTGACTGCTTAGATTAAGAT+CGG | + | chr7_3:81393854-81393873 | Msa1129420:intron | 35.0% | |
| ! | AATTGGAAATGGATTCCTTC+TGG | - | chr7_3:81394010-81394029 | None:intergenic | 35.0% |
| TCAGACATTGCATTAAACAC+CGG | - | chr7_3:81394145-81394164 | None:intergenic | 35.0% | |
| ! | AATGTCTGAGGTATCATCAA+TGG | + | chr7_3:81394156-81394175 | Msa1129420:CDS | 35.0% |
| ! | ATGTCTGAGGTATCATCAAT+GGG | + | chr7_3:81394157-81394176 | Msa1129420:CDS | 35.0% |
| TTATTTGGATCTTCTTGCAC+AGG | - | chr7_3:81394235-81394254 | None:intergenic | 35.0% | |
| AATGCTTCCCGATCTATTAT+TGG | - | chr7_3:81394314-81394333 | None:intergenic | 35.0% | |
| GCTCAAAAGTCAACAAGAAT+AGG | - | chr7_3:81394555-81394574 | None:intergenic | 35.0% | |
| AATTCCTGGAGATAGGAATT+AGG | + | chr7_3:81394599-81394618 | Msa1129420:three_prime_UTR | 35.0% | |
| TAGGAATTAGGATAGCCAAT+AGG | + | chr7_3:81394611-81394630 | Msa1129420:three_prime_UTR | 35.0% | |
| TATGTTCCAAACATGCTTCT+GGG | - | chr7_3:81394657-81394676 | None:intergenic | 35.0% | |
| ATATGTTCCAAACATGCTTC+TGG | - | chr7_3:81394658-81394677 | None:intergenic | 35.0% | |
| TCTAAGTTACACATCAGTCA+TGG | - | chr7_3:81394746-81394765 | None:intergenic | 35.0% | |
| GAGAGAGAGAGACAAGAAAA+TGG | + | chr7_3:81391546-81391565 | Msa1129420:exon | 40.0% | |
| TGAATCGGAGTGATTCAGAA+TGG | + | chr7_3:81391650-81391669 | Msa1129420:CDS | 40.0% | |
| GAATCGGAGTGATTCAGAAT+GGG | + | chr7_3:81391651-81391670 | Msa1129420:CDS | 40.0% | |
| ! | TTTGAGATTGACATCAACGG+TGG | - | chr7_3:81391776-81391795 | None:intergenic | 40.0% |
| !! | ACTTGTTCTAAGGTAGGAGA+AGG | - | chr7_3:81392303-81392322 | None:intergenic | 40.0% |
| !! | ACTAGCACTTGTTCTAAGGT+AGG | - | chr7_3:81392309-81392328 | None:intergenic | 40.0% |
| AGACACTAGCACTTGTTCTA+AGG | - | chr7_3:81392313-81392332 | None:intergenic | 40.0% | |
| GAATGCATGAATCATGCCAT+TGG | - | chr7_3:81392387-81392406 | None:intergenic | 40.0% | |
| CATGATTCATGCATTCCACT+AGG | + | chr7_3:81392391-81392410 | Msa1129420:intron | 40.0% | |
| AAATCTCAGGATCCTGACAA+TGG | + | chr7_3:81392658-81392677 | Msa1129420:CDS | 40.0% | |
| CCAAGTTCAGAAGGATAAGA+TGG | - | chr7_3:81392691-81392710 | None:intergenic | 40.0% | |
| CCATCTTATCCTTCTGAACT+TGG | + | chr7_3:81392688-81392707 | Msa1129420:CDS | 40.0% | |
| AAACCTTTCAAAGTAGCCAG+AGG | - | chr7_3:81392715-81392734 | None:intergenic | 40.0% | |
| TAGATGGATCGTTTCCAGAA+GGG | - | chr7_3:81392881-81392900 | None:intergenic | 40.0% | |
| TTAGATGGATCGTTTCCAGA+AGG | - | chr7_3:81392882-81392901 | None:intergenic | 40.0% | |
| !! | GTTGACTTGATTGTAACAGC+AGG | - | chr7_3:81392960-81392979 | None:intergenic | 40.0% |
| ! | CTTACTCGTTTTGCATCAGT+AGG | - | chr7_3:81393044-81393063 | None:intergenic | 40.0% |
| CTGATGCAAAACGAGTAAGA+AGG | + | chr7_3:81393045-81393064 | Msa1129420:CDS | 40.0% | |
| !! | CTATTAGAGAGCATCCTGAA+AGG | - | chr7_3:81393422-81393441 | None:intergenic | 40.0% |
| CTTTCAGGATGCTCTCTAAT+AGG | + | chr7_3:81393420-81393439 | Msa1129420:intron | 40.0% | |
| GGTTATAGAAGCCTACTACT+TGG | + | chr7_3:81393779-81393798 | Msa1129420:intron | 40.0% | |
| !! | GTACTGACTGTGTAAACTCA+AGG | - | chr7_3:81393830-81393849 | None:intergenic | 40.0% |
| GGTTACTACTGGATTCAGAT+TGG | - | chr7_3:81393953-81393972 | None:intergenic | 40.0% | |
| ! | GATTCCTTCTGGTTGGAATA+TGG | - | chr7_3:81393999-81394018 | None:intergenic | 40.0% |
| AAGATTTACTGGATCGAACC+CGG | + | chr7_3:81394123-81394142 | Msa1129420:CDS | 40.0% | |
| CAGACATTGCATTAAACACC+GGG | - | chr7_3:81394144-81394163 | None:intergenic | 40.0% | |
| GGTGTTTAATGCAATGTCTG+AGG | + | chr7_3:81394144-81394163 | Msa1129420:CDS | 40.0% | |
| ATGTCCAGTCATGATATGAG+AGG | + | chr7_3:81394286-81394305 | Msa1129420:CDS | 40.0% | |
| GAGAGGAGCCAATAATAGAT+CGG | + | chr7_3:81394303-81394322 | Msa1129420:CDS | 40.0% | |
| AGAGGAGCCAATAATAGATC+GGG | + | chr7_3:81394304-81394323 | Msa1129420:CDS | 40.0% | |
| CTATCCTAATTCCTATCTCC+AGG | - | chr7_3:81394606-81394625 | None:intergenic | 40.0% | |
| ! | AATTCTCCCAGAAGCATGTT+TGG | + | chr7_3:81394648-81394667 | Msa1129420:three_prime_UTR | 40.0% |
| ! | TTGACTTCGAAAGCGTGCAA+GGG | + | chr7_3:81391610-81391629 | Msa1129420:CDS | 45.0% |
| ATATACCCTCGACTTAGCGA+CGG | - | chr7_3:81391869-81391888 | None:intergenic | 45.0% | |
| TGTGTGGCAATCTGCTTTCA+TGG | + | chr7_3:81391996-81392015 | Msa1129420:intron | 45.0% | |
| GTGTGGCAATCTGCTTTCAT+GGG | + | chr7_3:81391997-81392016 | Msa1129420:intron | 45.0% | |
| CTCATGGCAATAGGGATCTT+TGG | + | chr7_3:81392633-81392652 | Msa1129420:intron | 45.0% | |
| GGGATCTTTGGTCAAATCTC+AGG | + | chr7_3:81392645-81392664 | Msa1129420:intron | 45.0% | |
| AAGTGGATCATCAGACGATG+AGG | + | chr7_3:81392983-81393002 | Msa1129420:CDS | 45.0% | |
| TCCTGAAAGGCAATGTCATC+AGG | - | chr7_3:81393409-81393428 | None:intergenic | 45.0% | |
| TGCTTGAGATTCAACCTCAG+TGG | + | chr7_3:81393878-81393897 | Msa1129420:intron | 45.0% | |
| ATTCAACCTCAGTGGTGCTT+TGG | + | chr7_3:81393886-81393905 | Msa1129420:intron | 45.0% | |
| ! | GAAAATCCAAAGCACCACTG+AGG | - | chr7_3:81393895-81393914 | None:intergenic | 45.0% |
| ! | GGAAATGGATTCCTTCTGGT+TGG | - | chr7_3:81394006-81394025 | None:intergenic | 45.0% |
| CATCTTCAGAGTCGAATTCG+TGG | + | chr7_3:81394427-81394446 | Msa1129420:CDS | 45.0% | |
| CTGGGAAAATTCCTGGAGAT+AGG | + | chr7_3:81394592-81394611 | Msa1129420:three_prime_UTR | 45.0% | |
| ! | GTTGACTTCGAAAGCGTGCA+AGG | + | chr7_3:81391609-81391628 | Msa1129420:CDS | 50.0% |
| GATGGCTGTGATCCATTGTC+AGG | - | chr7_3:81392673-81392692 | None:intergenic | 50.0% | |
| TCCTTCTGAACTTGGACCTC+TGG | + | chr7_3:81392696-81392715 | Msa1129420:CDS | 50.0% | |
| ! | GGACCTCTGGCTACTTTGAA+AGG | + | chr7_3:81392709-81392728 | Msa1129420:CDS | 50.0% |
| TATGTAGAATGCGGCCCTTC+TGG | + | chr7_3:81392864-81392883 | Msa1129420:intron | 50.0% | |
| GCAGGTTTCTTTGGCATGCA+AGG | - | chr7_3:81392942-81392961 | None:intergenic | 50.0% | |
| ATCAGACGATGAGGAAGCTG+AGG | + | chr7_3:81392992-81393011 | Msa1129420:CDS | 50.0% | |
| TCAGACGATGAGGAAGCTGA+GGG | + | chr7_3:81392993-81393012 | Msa1129420:CDS | 50.0% | |
| GCCTGATGACATTGCCTTTC+AGG | + | chr7_3:81393405-81393424 | Msa1129420:intron | 50.0% | |
| TCTTCGTCTTGAGCGTCTAG+CGG | - | chr7_3:81393450-81393469 | None:intergenic | 50.0% | |
| AGTCAGGCAAGGGTTACTAC+TGG | - | chr7_3:81393964-81393983 | None:intergenic | 50.0% | |
| ! | CCTTCTGGTTGGAATATGGC+TGG | - | chr7_3:81393995-81394014 | None:intergenic | 50.0% |
| CCAGCCATATTCCAACCAGA+AGG | + | chr7_3:81393992-81394011 | Msa1129420:intron | 50.0% | |
| GCATCAGCTGATGACTCAGA+AGG | - | chr7_3:81394205-81394224 | None:intergenic | 50.0% | |
| GGCTCCTCTCATATCATGAC+TGG | - | chr7_3:81394293-81394312 | None:intergenic | 50.0% | |
| TATCTTGTTCCCACCTGCTG+CGG | - | chr7_3:81394368-81394387 | None:intergenic | 50.0% | |
| GACGAACAAATTCCCTGCCA+CGG | + | chr7_3:81394389-81394408 | Msa1129420:CDS | 50.0% | |
| ACGAACAAATTCCCTGCCAC+GGG | + | chr7_3:81394390-81394409 | Msa1129420:CDS | 50.0% | |
| CTTCAGAGTCGAATTCGTGG+TGG | + | chr7_3:81394430-81394449 | Msa1129420:CDS | 50.0% | |
| ! | ACTTCGAAAGCGTGCAAGGG+AGG | + | chr7_3:81391613-81391632 | Msa1129420:CDS | 55.0% |
| GGCGCAAGCAAGATCAAGCT+TGG | - | chr7_3:81391845-81391864 | None:intergenic | 55.0% | |
| GCCAGAGGTCCAAGTTCAGA+AGG | - | chr7_3:81392700-81392719 | None:intergenic | 55.0% | |
| GGATTCACGCAGTCAGGCAA+GGG | - | chr7_3:81393974-81393993 | None:intergenic | 55.0% | |
| TGGATTCACGCAGTCAGGCA+AGG | - | chr7_3:81393975-81393994 | None:intergenic | 55.0% | |
| ATGGCTGGATTCACGCAGTC+AGG | - | chr7_3:81393980-81393999 | None:intergenic | 55.0% | |
| AGAAGAACACCGCAGCAGGT+GGG | + | chr7_3:81394356-81394375 | Msa1129420:CDS | 55.0% | |
| GCAGCAGGTGGGAACAAGAT+AGG | + | chr7_3:81394367-81394386 | Msa1129420:CDS | 55.0% | |
| AACAAATTCCCTGCCACGGG+TGG | + | chr7_3:81394393-81394412 | Msa1129420:CDS | 55.0% | |
| TACCCTCGACTTAGCGACGG+CGG | - | chr7_3:81391866-81391885 | None:intergenic | 60.0% | |
| GTGCAGAAGAACACCGCAGC+AGG | + | chr7_3:81394352-81394371 | Msa1129420:CDS | 60.0% | |
| CAGAAGAACACCGCAGCAGG+TGG | + | chr7_3:81394355-81394374 | Msa1129420:CDS | 60.0% | |
| TGTTCCAAGCTAGCCACCCG+TGG | - | chr7_3:81394409-81394428 | None:intergenic | 60.0% | |
| CAAGCTAGCCACCCGTGGCA+GGG | - | chr7_3:81394404-81394423 | None:intergenic | 65.0% | |
| CGCCGCCGTCGCTAAGTCGA+GGG | + | chr7_3:81391861-81391880 | Msa1129420:CDS | 70.0% | |
| CCAAGCTAGCCACCCGTGGC+AGG | - | chr7_3:81394405-81394424 | None:intergenic | 70.0% | |
| ! | CCTGCCACGGGTGGCTAGCT+TGG | + | chr7_3:81394402-81394421 | Msa1129420:CDS | 70.0% |
| GCGCCGCCGTCGCTAAGTCG+AGG | + | chr7_3:81391860-81391879 | Msa1129420:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 81391507 | 81394784 | 81391507 | ID=Msa1129420;Name=Msa1129420 |
| chr7_3 | mRNA | 81391507 | 81394784 | 81391507 | ID=Msa1129420-mRNA-1;Parent=Msa1129420;Name=Msa1129420-mRNA-1;_AED=0.23;_eAED=0.23;_QI=58|1|1|1|1|1|6|313|391 |
| chr7_3 | exon | 81391507 | 81391882 | 81391507 | ID=Msa1129420-mRNA-1:exon:23657;Parent=Msa1129420-mRNA-1 |
| chr7_3 | exon | 81392646 | 81392730 | 81392646 | ID=Msa1129420-mRNA-1:exon:23658;Parent=Msa1129420-mRNA-1 |
| chr7_3 | exon | 81392871 | 81393066 | 81392871 | ID=Msa1129420-mRNA-1:exon:23659;Parent=Msa1129420-mRNA-1 |
| chr7_3 | exon | 81393427 | 81393502 | 81393427 | ID=Msa1129420-mRNA-1:exon:23660;Parent=Msa1129420-mRNA-1 |
| chr7_3 | exon | 81393617 | 81393742 | 81393617 | ID=Msa1129420-mRNA-1:exon:23661;Parent=Msa1129420-mRNA-1 |
| chr7_3 | exon | 81394097 | 81394784 | 81394097 | ID=Msa1129420-mRNA-1:exon:23662;Parent=Msa1129420-mRNA-1 |
| chr7_3 | five_prime_UTR | 81391507 | 81391564 | 81391507 | ID=Msa1129420-mRNA-1:five_prime_utr;Parent=Msa1129420-mRNA-1 |
| chr7_3 | CDS | 81391565 | 81391882 | 81391565 | ID=Msa1129420-mRNA-1:cds;Parent=Msa1129420-mRNA-1 |
| chr7_3 | CDS | 81392646 | 81392730 | 81392646 | ID=Msa1129420-mRNA-1:cds;Parent=Msa1129420-mRNA-1 |
| chr7_3 | CDS | 81392871 | 81393066 | 81392871 | ID=Msa1129420-mRNA-1:cds;Parent=Msa1129420-mRNA-1 |
| chr7_3 | CDS | 81393427 | 81393502 | 81393427 | ID=Msa1129420-mRNA-1:cds;Parent=Msa1129420-mRNA-1 |
| chr7_3 | CDS | 81393617 | 81393742 | 81393617 | ID=Msa1129420-mRNA-1:cds;Parent=Msa1129420-mRNA-1 |
| chr7_3 | CDS | 81394097 | 81394471 | 81394097 | ID=Msa1129420-mRNA-1:cds;Parent=Msa1129420-mRNA-1 |
| chr7_3 | three_prime_UTR | 81394472 | 81394784 | 81394472 | ID=Msa1129420-mRNA-1:three_prime_utr;Parent=Msa1129420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
