Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372920 | XP_024634043.1 | 94.855 | 311 | 13 | 1 | 1 | 308 | 1 | 311 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372920 | sp|Q84LH3|WEX_ARATH | 47.163 | 282 | 128 | 6 | 26 | 292 | 9 | 284 | 4.10e-79 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372920 | A0A396IWX4 | 94.855 | 311 | 13 | 1 | 1 | 308 | 1 | 311 | 0.0 | 541 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0372920 | Msa0421470 | 0.946394 | 5.021807e-105 | -8.615850e-47 |
| Msa0372920 | Msa0467450 | 0.845398 | 4.164007e-59 | -8.615850e-47 |
| Msa0372920 | Msa0745640 | 0.872752 | 2.497783e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372920 | MtrunA17_Chr3g0121831 | 94.855 | 311 | 13 | 1 | 1 | 308 | 1 | 311 | 0.0 | 541 |
| Msa0372920 | MtrunA17_Chr7g0241401 | 39.860 | 143 | 82 | 4 | 135 | 275 | 84 | 224 | 2.12e-25 | 101 |
| Msa0372920 | MtrunA17_Chr7g0241341 | 35.862 | 145 | 90 | 3 | 137 | 280 | 45 | 187 | 3.29e-23 | 94.7 |
| Msa0372920 | MtrunA17_Chr7g0241411 | 36.986 | 146 | 88 | 4 | 137 | 280 | 80 | 223 | 1.06e-21 | 91.7 |
| Msa0372920 | MtrunA17_Chr4g0070431 | 34.731 | 167 | 100 | 6 | 118 | 280 | 38 | 199 | 2.55e-17 | 79.3 |
| Msa0372920 | MtrunA17_Chr7g0241391 | 33.846 | 130 | 82 | 3 | 154 | 280 | 81 | 209 | 2.26e-13 | 68.2 |
| Msa0372920 | MtrunA17_Chr1g0192551 | 33.133 | 166 | 88 | 8 | 137 | 291 | 375 | 528 | 2.74e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372920 | AT4G13870.2 | 47.163 | 282 | 128 | 6 | 26 | 292 | 9 | 284 | 4.17e-80 | 245 |
| Msa0372920 | AT4G13870.1 | 47.163 | 282 | 125 | 7 | 26 | 292 | 9 | 281 | 1.11e-77 | 238 |
| Msa0372920 | AT4G13885.1 | 42.342 | 111 | 27 | 1 | 182 | 292 | 186 | 259 | 2.49e-19 | 86.3 |
| Msa0372920 | AT1G56310.2 | 32.727 | 165 | 91 | 6 | 137 | 290 | 381 | 536 | 1.62e-12 | 68.2 |
| Msa0372920 | AT1G56310.1 | 32.727 | 165 | 91 | 6 | 137 | 290 | 381 | 536 | 1.62e-12 | 68.2 |
Find 82 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTCTTGGTTTCTCTATC+AGG | 0.185259 | 3_1:-71765164 | Msa0372920:intron |
| GTAGTGATGGCGGTGGGTTT+GGG | 0.208962 | 3_1:+71769084 | None:intergenic |
| GGTAGTGATGGCGGTGGGTT+TGG | 0.223276 | 3_1:+71769083 | None:intergenic |
| TCGGCAACTTCCTGGGCATC+TGG | 0.234563 | 3_1:+71764447 | None:intergenic |
| GATTATTTCATATCCATTAA+AGG | 0.237423 | 3_1:-71766824 | Msa0372920:CDS |
| AGTTGCTCCTTTGACAAATA+AGG | 0.254115 | 3_1:+71765211 | None:intergenic |
| AAGGTCTTCCACACCTTTAA+TGG | 0.256939 | 3_1:+71766811 | None:intergenic |
| GTTCTTCATCTAATTCATTC+TGG | 0.263565 | 3_1:-71767060 | Msa0372920:CDS |
| GATTGGCGGTGATGCTTCTA+AGG | 0.264433 | 3_1:-71766855 | Msa0372920:CDS |
| GCAAAATAAGAATGGGGAAT+TGG | 0.279134 | 3_1:-71765240 | Msa0372920:CDS |
| TTCCCACAAAACTTCATTAC+AGG | 0.290923 | 3_1:+71768273 | None:intergenic |
| CAGGTAACCTCATCTTTAAA+TGG | 0.311083 | 3_1:+71768292 | None:intergenic |
| ATCCAGTAGACTTGATTTCT+TGG | 0.335829 | 3_1:+71764275 | None:intergenic |
| CAAAATAAGAATGGGGAATT+GGG | 0.341744 | 3_1:-71765239 | Msa0372920:CDS |
| GACGGCGGCTGCTGCGGCGA+GGG | 0.351741 | 3_1:+71769034 | None:intergenic |
| TCAAGATCTTCCTGGGATAA+AGG | 0.355915 | 3_1:+71769138 | None:intergenic |
| ATCGTTCAGGCGAAGGAAAA+AGG | 0.359248 | 3_1:-71769212 | Msa0372920:CDS |
| CTCTCTTTCTCACCTTCTCC+AGG | 0.359477 | 3_1:-71768970 | Msa0372920:intron |
| GATGCAAGACCCCACTTATT+CGG | 0.360319 | 3_1:+71766755 | None:intergenic |
| CAATGGCTTCAAGATCTTCC+TGG | 0.382197 | 3_1:+71769130 | None:intergenic |
| ACGGCGGCTGCTGCGGCGAG+GGG | 0.394600 | 3_1:+71769035 | None:intergenic |
| GTGAGAGATGAAGGGACGTT+TGG | 0.414413 | 3_1:+71769062 | None:intergenic |
| TCCAGTAGACTTGATTTCTT+GGG | 0.427807 | 3_1:+71764276 | None:intergenic |
| GATATTTACAAGGTTGGAGC+GGG | 0.430491 | 3_1:-71766878 | Msa0372920:intron |
| TACAAGGTTGGAGCGGGGAT+TGG | 0.439136 | 3_1:-71766872 | Msa0372920:intron |
| CAATCGGATTTGACATTGAG+TGG | 0.443247 | 3_1:-71768155 | Msa0372920:CDS |
| TCCCAAGAAATCAAGTCTAC+TGG | 0.444531 | 3_1:-71764277 | Msa0372920:three_prime_UTR |
| GGTGAGAAAGAGAGAGAAGG+TGG | 0.448106 | 3_1:+71768979 | None:intergenic |
| CGACGGCGGCTGCTGCGGCG+AGG | 0.448728 | 3_1:+71769033 | None:intergenic |
| AAGGTTGGAGCGGGGATTGG+CGG | 0.452888 | 3_1:-71766869 | Msa0372920:CDS |
| CGGCGGCTGCTGCGGCGAGG+GGG | 0.457764 | 3_1:+71769036 | None:intergenic |
| AAGCCCAGCAAAATAAGAAT+GGG | 0.463753 | 3_1:-71765247 | Msa0372920:CDS |
| TAGTGATGGCGGTGGGTTTG+GGG | 0.478100 | 3_1:+71769085 | None:intergenic |
| GTGGGAAAATTATGTACAGC+AGG | 0.478430 | 3_1:-71768257 | Msa0372920:CDS |
| TTTGATTAGCGTGATAAGAA+AGG | 0.480610 | 3_1:+71766792 | None:intergenic |
| TAGGTGGAGGTCCGAATAAG+TGG | 0.494543 | 3_1:-71766766 | Msa0372920:CDS |
| CGGCAACTTCCTGGGCATCT+GGG | 0.500387 | 3_1:+71764448 | None:intergenic |
| AGATTGAAGAGTGGCGTCAA+TGG | 0.502315 | 3_1:+71769113 | None:intergenic |
| GAAGCCCAGCAAAATAAGAA+TGG | 0.502994 | 3_1:-71765248 | Msa0372920:CDS |
| CACTCAATGTCAAATCCGAT+TGG | 0.505854 | 3_1:+71768156 | None:intergenic |
| TTGATGGATCGTTCAGGCGA+AGG | 0.513572 | 3_1:-71769219 | Msa0372920:CDS |
| GTAAGCGACGGCGGCTGCTG+CGG | 0.524183 | 3_1:+71769028 | None:intergenic |
| GGAGACTCCTTATTTGTCAA+AGG | 0.525820 | 3_1:-71765218 | Msa0372920:CDS |
| AGTAAAAGCTGTAGATTTCG+AGG | 0.526432 | 3_1:+71767033 | None:intergenic |
| TAAAGATCTCCCAGATGCCC+AGG | 0.529380 | 3_1:-71764457 | Msa0372920:CDS |
| GTGAGAAAGAGAGAGAAGGT+GGG | 0.530800 | 3_1:+71768980 | None:intergenic |
| CGTTTGGTAGTGATGGCGGT+GGG | 0.536538 | 3_1:+71769078 | None:intergenic |
| CTCGCATTCGCACACGAATG+AGG | 0.537585 | 3_1:+71769161 | None:intergenic |
| GGGGAGAGAAGATTGAAGAG+TGG | 0.538363 | 3_1:+71769104 | None:intergenic |
| GAGGAAGTGGGACCTGGAGA+AGG | 0.539535 | 3_1:+71768958 | None:intergenic |
| AATGGCTTCAAGATCTTCCT+GGG | 0.547393 | 3_1:+71769131 | None:intergenic |
| TGCAAGGCCATTTAAAGATG+AGG | 0.550092 | 3_1:-71768299 | Msa0372920:intron |
| TTTCATATCCATTAAAGGTG+TGG | 0.552455 | 3_1:-71766819 | Msa0372920:CDS |
| ACGTTTGGTAGTGATGGCGG+TGG | 0.565650 | 3_1:+71769077 | None:intergenic |
| GAGATGATGCAAATTCCAAT+CGG | 0.569168 | 3_1:-71768171 | Msa0372920:CDS |
| CAGCAGGACATTTAATGATG+TGG | 0.569177 | 3_1:-71768241 | Msa0372920:CDS |
| ACTTCTACAGGTGTTCCACC+CGG | 0.569270 | 3_1:-71767129 | Msa0372920:intron |
| GACAAAAGTAGTGAAGTTGA+TGG | 0.571140 | 3_1:-71764426 | Msa0372920:CDS |
| TGGAGACCCACCTTCAAAAG+AGG | 0.572553 | 3_1:-71768135 | Msa0372920:intron |
| CGAATGCGAGCCTTTATCCC+AGG | 0.575805 | 3_1:-71769148 | Msa0372920:CDS |
| CCAAGAAGCAAAAGCATCTG+TGG | 0.579851 | 3_1:+71765177 | None:intergenic |
| TATCACGCTAATCAAAAGCT+AGG | 0.580739 | 3_1:-71766785 | Msa0372920:CDS |
| AGGAGGAGCTTGGTTTCGAG+CGG | 0.580987 | 3_1:-71769188 | Msa0372920:CDS |
| GAAGGGACGTTTGGTAGTGA+TGG | 0.582694 | 3_1:+71769071 | None:intergenic |
| CACTACACAGACATGAGATA+CGG | 0.589449 | 3_1:+71764387 | None:intergenic |
| GAAGGTGAGAAAGAGAGAGA+AGG | 0.591518 | 3_1:+71768976 | None:intergenic |
| GTAAAAGCTGTAGATTTCGA+GGG | 0.592056 | 3_1:+71767034 | None:intergenic |
| TGAAGAGCGATGAGCGATGT+GGG | 0.592673 | 3_1:+71769006 | None:intergenic |
| AGGTGGAGGTCCGAATAAGT+GGG | 0.596759 | 3_1:-71766765 | Msa0372920:CDS |
| ATGAGATACGGTCATTGTTG+CGG | 0.601141 | 3_1:+71764399 | None:intergenic |
| GCTAATCAAAAGCTAGGTGG+AGG | 0.615154 | 3_1:-71766779 | Msa0372920:CDS |
| CTTCTACAGGTGTTCCACCC+GGG | 0.615423 | 3_1:-71767128 | Msa0372920:intron |
| TTGAAGAGCGATGAGCGATG+TGG | 0.628089 | 3_1:+71769005 | None:intergenic |
| TGAGCGATGTGGGTAAGCGA+CGG | 0.634153 | 3_1:+71769016 | None:intergenic |
| GGGACGTTTGGTAGTGATGG+CGG | 0.643409 | 3_1:+71769074 | None:intergenic |
| TGATATTTACAAGGTTGGAG+CGG | 0.649599 | 3_1:-71766879 | Msa0372920:intron |
| CACGCTAATCAAAAGCTAGG+TGG | 0.649833 | 3_1:-71766782 | Msa0372920:CDS |
| AATAGAAACCTTCAAAACTG+AGG | 0.653917 | 3_1:+71767002 | None:intergenic |
| ATATTTACAAGGTTGGAGCG+GGG | 0.669237 | 3_1:-71766877 | Msa0372920:intron |
| AGCCCAGCAAAATAAGAATG+GGG | 0.678211 | 3_1:-71765246 | Msa0372920:CDS |
| GCGATGTGGGTAAGCGACGG+CGG | 0.679689 | 3_1:+71769019 | None:intergenic |
| GGTGGAGGTCCGAATAAGTG+GGG | 0.701955 | 3_1:-71766764 | Msa0372920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTATATTATTATGAC+AGG | - | chr3_1:71767057-71767076 | Msa0372920:CDS | 10.0% |
| !!! | ATTTTTATATTATTATGACA+GGG | - | chr3_1:71767058-71767077 | Msa0372920:CDS | 10.0% |
| !! | ATCAATTAAATTAAAAATAC+CGG | + | chr3_1:71769225-71769244 | None:intergenic | 10.0% |
| !! | TATTAAATAAATCTCTGTTT+AGG | + | chr3_1:71764731-71764750 | None:intergenic | 15.0% |
| !!! | TACTTTTTGTTTACTTATAT+TGG | - | chr3_1:71764880-71764899 | Msa0372920:intron | 15.0% |
| !!! | TATTAAAGTATTGTAGTTTT+AGG | + | chr3_1:71766229-71766248 | None:intergenic | 15.0% |
| !! | ATATTACTTATTATAATTGC+AGG | + | chr3_1:71767259-71767278 | None:intergenic | 15.0% |
| !!! | ATATAATTTTTAGACATCAT+CGG | - | chr3_1:71767466-71767485 | Msa0372920:intron | 15.0% |
| !! | AGATAACAATTAAAAGATTT+AGG | - | chr3_1:71767597-71767616 | Msa0372920:intron | 15.0% |
| !! | GATAACAATTAAAAGATTTA+GGG | - | chr3_1:71767598-71767617 | Msa0372920:intron | 15.0% |
| !!! | TGAAAATTCTAAAACTTATT+TGG | - | chr3_1:71767667-71767686 | Msa0372920:intron | 15.0% |
| !! | ATTGATTGAATTTACTATTT+AGG | + | chr3_1:71768868-71768887 | None:intergenic | 15.0% |
| !! | AGTAAAGTAATCAATATAGT+GGG | + | chr3_1:71764531-71764550 | None:intergenic | 20.0% |
| !! | AAGTAAAGTAATCAATATAG+TGG | + | chr3_1:71764532-71764551 | None:intergenic | 20.0% |
| !! | TGAAAACAAAATTCAAATAC+TGG | + | chr3_1:71764800-71764819 | None:intergenic | 20.0% |
| !! | ATAGAAAAATTATGAGATTC+AGG | + | chr3_1:71765017-71765036 | None:intergenic | 20.0% |
| !!! | CTCATAATTTTTCTATTTCA+TGG | - | chr3_1:71765021-71765040 | Msa0372920:intron | 20.0% |
| !!! | ATTTCATCAATATTTCCTTT+TGG | - | chr3_1:71765097-71765116 | Msa0372920:intron | 20.0% |
| !! | AAGTTTATTAGAAAACCAAA+AGG | + | chr3_1:71765115-71765134 | None:intergenic | 20.0% |
| !!! | AGAAAATTCGATGTTTTTAT+TGG | - | chr3_1:71765590-71765609 | Msa0372920:intron | 20.0% |
| !!! | AAAAAAGTAATTTGAAGTTG+TGG | + | chr3_1:71766262-71766281 | None:intergenic | 20.0% |
| !! | TATGATGTTTGATATTTACA+AGG | - | chr3_1:71766567-71766586 | Msa0372920:intron | 20.0% |
| !! | GATTATTTCATATCCATTAA+AGG | - | chr3_1:71766631-71766650 | Msa0372920:intron | 20.0% |
| !! | TTTAAAAAACAGAATCAAAC+AGG | + | chr3_1:71767624-71767643 | None:intergenic | 20.0% |
| !! | AATTTCCAAAACTAAAAACA+CGG | - | chr3_1:71767793-71767812 | Msa0372920:intron | 20.0% |
| !!! | ATGTGGTATATTTTCATTAA+TGG | - | chr3_1:71767818-71767837 | Msa0372920:intron | 20.0% |
| !!! | TTTTAAATGTGTTGTATCTT+AGG | + | chr3_1:71768750-71768769 | None:intergenic | 20.0% |
| ! | TAAAGTAATCAATATAGTGG+GGG | + | chr3_1:71764529-71764548 | None:intergenic | 25.0% |
| ! | GTAAAGTAATCAATATAGTG+GGG | + | chr3_1:71764530-71764549 | None:intergenic | 25.0% |
| ! | ACTGGAAATCAACATAAATT+GGG | + | chr3_1:71764607-71764626 | None:intergenic | 25.0% |
| ! | AACTGGAAATCAACATAAAT+TGG | + | chr3_1:71764608-71764627 | None:intergenic | 25.0% |
| !!! | TATGTTGATTTCCAGTTTAT+AGG | - | chr3_1:71764611-71764630 | Msa0372920:intron | 25.0% |
| !! | TATTTTCTCTTCCTATAAAC+TGG | + | chr3_1:71764625-71764644 | None:intergenic | 25.0% |
| ! | GTGTAAATGAATTTAACACT+AGG | + | chr3_1:71764684-71764703 | None:intergenic | 25.0% |
| ! | GTTAAATTCATTTACACTGA+CGG | - | chr3_1:71764687-71764706 | Msa0372920:intron | 25.0% |
| !! | TATTTTGTAGAGAAAGAGAT+AGG | + | chr3_1:71765064-71765083 | None:intergenic | 25.0% |
| !!! | ATGTCTTTTTTATTGTTGCA+AGG | - | chr3_1:71765140-71765159 | Msa0372920:intron | 25.0% |
| !!! | TCTTTTCTTCAATGCTTTTT+AGG | + | chr3_1:71765259-71765278 | None:intergenic | 25.0% |
| !! | TTGCCAATATTGTTACTTAA+AGG | + | chr3_1:71765427-71765446 | None:intergenic | 25.0% |
| !! | AAACATCGAATTTTCTTTAC+TGG | + | chr3_1:71765586-71765605 | None:intergenic | 25.0% |
| !! | TTTTCTTCTAGTCAATTGTT+TGG | - | chr3_1:71765693-71765712 | Msa0372920:intron | 25.0% |
| ! | GGTTTCTATTTACTTTAAAC+TGG | - | chr3_1:71766466-71766485 | Msa0372920:intron | 25.0% |
| ! | ATGTTTGATATTTACAAGGT+TGG | - | chr3_1:71766571-71766590 | Msa0372920:intron | 25.0% |
| ! | TGAAAAACTTCTATCAAAAC+AGG | - | chr3_1:71766729-71766748 | Msa0372920:CDS | 25.0% |
| ! | TACCAGATATAACATAAGAA+TGG | + | chr3_1:71766925-71766944 | None:intergenic | 25.0% |
| ! | AAAATAAATTCTTCCCCAAA+AGG | + | chr3_1:71767043-71767062 | None:intergenic | 25.0% |
| ! | TAAACTATACATGTAATGTC+AGG | + | chr3_1:71767121-71767140 | None:intergenic | 25.0% |
| !!! | ACTAGCACATTTTTTTAAAG+CGG | + | chr3_1:71767193-71767212 | None:intergenic | 25.0% |
| !! | GCAAAACATAAAACAGTTTT+GGG | + | chr3_1:71767717-71767736 | None:intergenic | 25.0% |
| !! | AGCAAAACATAAAACAGTTT+TGG | + | chr3_1:71767718-71767737 | None:intergenic | 25.0% |
| !!! | GTGTTTTTAGTTTTGGAAAT+TGG | + | chr3_1:71767794-71767813 | None:intergenic | 25.0% |
| !!! | ATGGCATTTTAGTAAATAAG+TGG | - | chr3_1:71767837-71767856 | Msa0372920:intron | 25.0% |
| ! | AAGAAATAAGATTATCAAGC+AGG | - | chr3_1:71767889-71767908 | Msa0372920:intron | 25.0% |
| ! | AAATAAAAAACGGTGGAAAA+TGG | + | chr3_1:71768054-71768073 | None:intergenic | 25.0% |
| ! | AGGCCAAAGAAAATAAAAAA+CGG | + | chr3_1:71768064-71768083 | None:intergenic | 25.0% |
| ! | TAAAAGTTAATCTAGTTGCA+GGG | - | chr3_1:71768424-71768443 | Msa0372920:intron | 25.0% |
| ! | TAGAAACTTAAGTATGAGAT+AGG | - | chr3_1:71768454-71768473 | Msa0372920:intron | 25.0% |
| TTCCAATTAAGCCAGTAAAA+CGG | + | chr3_1:71764958-71764977 | None:intergenic | 30.0% | |
| ! | TTACCTGTAATGAAGTTTTG+TGG | - | chr3_1:71765179-71765198 | Msa0372920:CDS | 30.0% |
| !! | TACCTGTAATGAAGTTTTGT+GGG | - | chr3_1:71765180-71765199 | Msa0372920:CDS | 30.0% |
| GTAATAGAGTCAATACAACT+AGG | + | chr3_1:71765396-71765415 | None:intergenic | 30.0% | |
| ! | CCAATATTGTTACTTAAAGG+CGG | + | chr3_1:71765424-71765443 | None:intergenic | 30.0% |
| !!! | TTGATCAACTAGTTTTGGTT+TGG | - | chr3_1:71765504-71765523 | Msa0372920:intron | 30.0% |
| TTTGGCATTTGTATCTGTTT+GGG | - | chr3_1:71765522-71765541 | Msa0372920:intron | 30.0% | |
| TGAAAAGATAAGAACATAGG+TGG | + | chr3_1:71765785-71765804 | None:intergenic | 30.0% | |
| TGCTGAAAAGATAAGAACAT+AGG | + | chr3_1:71765788-71765807 | None:intergenic | 30.0% | |
| !!! | GAAAGTTTTGGAAAAAAGGA+AGG | - | chr3_1:71765876-71765895 | Msa0372920:intron | 30.0% |
| CAAGTGGAAGAAATAACATT+GGG | - | chr3_1:71765901-71765920 | Msa0372920:intron | 30.0% | |
| GGGAACTAAAAAGTTGTATT+GGG | - | chr3_1:71765982-71766001 | Msa0372920:intron | 30.0% | |
| GGAACTAAAAAGTTGTATTG+GGG | - | chr3_1:71765983-71766002 | Msa0372920:intron | 30.0% | |
| GAACTAAAAAGTTGTATTGG+GGG | - | chr3_1:71765984-71766003 | Msa0372920:intron | 30.0% | |
| !!! | TGTAGTTTTAGGCTTTGTTT+GGG | + | chr3_1:71766218-71766237 | None:intergenic | 30.0% |
| !!! | TTGTAGTTTTAGGCTTTGTT+TGG | + | chr3_1:71766219-71766238 | None:intergenic | 30.0% |
| GTATTGTATGAAACTTCTAC+AGG | - | chr3_1:71766314-71766333 | Msa0372920:intron | 30.0% | |
| GTTCTTCATCTAATTCATTC+TGG | - | chr3_1:71766395-71766414 | Msa0372920:intron | 30.0% | |
| AATAGAAACCTTCAAAACTG+AGG | + | chr3_1:71766456-71766475 | None:intergenic | 30.0% | |
| ! | TTGTTTTCCTTTCTATCTGT+AGG | - | chr3_1:71766505-71766524 | Msa0372920:intron | 30.0% |
| ATTAGTTCCTACAGATAGAA+AGG | + | chr3_1:71766515-71766534 | None:intergenic | 30.0% | |
| TTTCATATCCATTAAAGGTG+TGG | - | chr3_1:71766636-71766655 | Msa0372920:intron | 30.0% | |
| TTTGATTAGCGTGATAAGAA+AGG | + | chr3_1:71766666-71766685 | None:intergenic | 30.0% | |
| CATATTTCTTAAAAACCGAC+TGG | - | chr3_1:71766765-71766784 | Msa0372920:CDS | 30.0% | |
| ! | ATCAGGTGTTTGAAGAATTT+TGG | + | chr3_1:71766817-71766836 | None:intergenic | 30.0% |
| AAAATTCTTCAAACACCTGA+TGG | - | chr3_1:71766816-71766835 | Msa0372920:CDS | 30.0% | |
| CACCATTCTTATGTTATATC+TGG | - | chr3_1:71766920-71766939 | Msa0372920:intron | 30.0% | |
| ! | GTTTCCTTTGAAAGTTTCTT+CGG | - | chr3_1:71766945-71766964 | Msa0372920:intron | 30.0% |
| ! | TCAATGCTTTAACTACCTTT+TGG | - | chr3_1:71767025-71767044 | Msa0372920:CDS | 30.0% |
| ! | CAATGCTTTAACTACCTTTT+GGG | - | chr3_1:71767026-71767045 | Msa0372920:CDS | 30.0% |
| ! | AATGCTTTAACTACCTTTTG+GGG | - | chr3_1:71767027-71767046 | Msa0372920:CDS | 30.0% |
| !!! | TTTTTTTAAAGCGGATAGAG+AGG | + | chr3_1:71767184-71767203 | None:intergenic | 30.0% |
| ATTTCCAATTACTGAGTAGT+AGG | - | chr3_1:71767294-71767313 | Msa0372920:intron | 30.0% | |
| TTTACCTACTACTCAGTAAT+TGG | + | chr3_1:71767301-71767320 | None:intergenic | 30.0% | |
| ! | ATGCTGATTAAGTTCTTCAA+AGG | - | chr3_1:71767422-71767441 | Msa0372920:intron | 30.0% |
| ! | TGCTGATTAAGTTCTTCAAA+GGG | - | chr3_1:71767423-71767442 | Msa0372920:intron | 30.0% |
| !!! | CATTTCCGTGTTTTTAGTTT+TGG | + | chr3_1:71767801-71767820 | None:intergenic | 30.0% |
| AAACTAAAAACACGGAAATG+TGG | - | chr3_1:71767801-71767820 | Msa0372920:intron | 30.0% | |
| AACTGAAAACACAATCAAAC+AGG | - | chr3_1:71767981-71768000 | Msa0372920:intron | 30.0% | |
| GGAAAATGGATACTAAAGAA+AGG | + | chr3_1:71768040-71768059 | None:intergenic | 30.0% | |
| CCAAAGAAAATAAAAAACGG+TGG | + | chr3_1:71768061-71768080 | None:intergenic | 30.0% | |
| !!! | CCACCGTTTTTTATTTTCTT+TGG | - | chr3_1:71768058-71768077 | Msa0372920:intron | 30.0% |
| !!! | TTTTATTTTCTTTGGCCTTG+CGG | - | chr3_1:71768066-71768085 | Msa0372920:intron | 30.0% |
| GCTGCAAAAATAAATAAGCT+TGG | + | chr3_1:71768183-71768202 | None:intergenic | 30.0% | |
| CAAAATAAGAATGGGGAATT+GGG | - | chr3_1:71768216-71768235 | Msa0372920:CDS | 30.0% | |
| GGTAATAAGGAATTCTTTGA+TGG | - | chr3_1:71768312-71768331 | Msa0372920:intron | 30.0% | |
| TGTCATGATTTGATAGAGTT+TGG | - | chr3_1:71768360-71768379 | Msa0372920:intron | 30.0% | |
| CTAAAAGTTAATCTAGTTGC+AGG | - | chr3_1:71768423-71768442 | Msa0372920:intron | 30.0% | |
| AAAAGTTAATCTAGTTGCAG+GGG | - | chr3_1:71768425-71768444 | Msa0372920:intron | 30.0% | |
| GACAAATAGATTAAGAGAGT+TGG | + | chr3_1:71768818-71768837 | None:intergenic | 30.0% | |
| ! | TTTACTATTTAGGACTCGTA+CGG | + | chr3_1:71768858-71768877 | None:intergenic | 30.0% |
| ACAAGTTTGAAAACAAGATG+AGG | + | chr3_1:71768908-71768927 | None:intergenic | 30.0% | |
| ! | TCTGCAAAAGTATACAAGAA+CGG | + | chr3_1:71768974-71768993 | None:intergenic | 30.0% |
| !! | ATCAACTTCACTACTTTTGT+CGG | + | chr3_1:71769030-71769049 | None:intergenic | 30.0% |
| TAAAAATACCGGCCATAAAA+GGG | + | chr3_1:71769214-71769233 | None:intergenic | 30.0% | |
| TTAAAAATACCGGCCATAAA+AGG | + | chr3_1:71769215-71769234 | None:intergenic | 30.0% | |
| !! | AACATTTTGATGGATCGTTC+AGG | - | chr3_1:71764230-71764249 | Msa0372920:three_prime_UTR | 35.0% |
| TCTCTGTTTAGGAACTTCAA+TGG | + | chr3_1:71764720-71764739 | None:intergenic | 35.0% | |
| ! | TGTTTTCATGTAAGTGCTTG+TGG | - | chr3_1:71764812-71764831 | Msa0372920:intron | 35.0% |
| ATTCCATCCAAGTTTCAAAC+TGG | - | chr3_1:71764843-71764862 | Msa0372920:intron | 35.0% | |
| !!! | TACCGTTTTACTGGCTTAAT+TGG | - | chr3_1:71764953-71764972 | Msa0372920:intron | 35.0% |
| !!! | GTTTTACTGGCTTAATTGGA+AGG | - | chr3_1:71764957-71764976 | Msa0372920:intron | 35.0% |
| !! | AGGAAACGGATGATTAGTTT+AGG | - | chr3_1:71764977-71764996 | Msa0372920:intron | 35.0% |
| AGAGATAGGATAAGTCTTCA+GGG | + | chr3_1:71765050-71765069 | None:intergenic | 35.0% | |
| AAGAGATAGGATAAGTCTTC+AGG | + | chr3_1:71765051-71765070 | None:intergenic | 35.0% | |
| CAGGTAACCTCATCTTTAAA+TGG | + | chr3_1:71765166-71765185 | None:intergenic | 35.0% | |
| TTCCCACAAAACTTCATTAC+AGG | + | chr3_1:71765185-71765204 | None:intergenic | 35.0% | |
| GAGATGATGCAAATTCCAAT+CGG | - | chr3_1:71765284-71765303 | Msa0372920:intron | 35.0% | |
| ! | TCTTGTTATGTTCAAGTAGC+TGG | - | chr3_1:71765354-71765373 | Msa0372920:intron | 35.0% |
| TATGTTCAAGTAGCTGGTTA+TGG | - | chr3_1:71765360-71765379 | Msa0372920:intron | 35.0% | |
| CCGCCTTTAAGTAACAATAT+TGG | - | chr3_1:71765421-71765440 | Msa0372920:intron | 35.0% | |
| !! | GGAAGTTGATCAACTAGTTT+TGG | - | chr3_1:71765499-71765518 | Msa0372920:intron | 35.0% |
| GTTTGGCATTTGTATCTGTT+TGG | - | chr3_1:71765521-71765540 | Msa0372920:intron | 35.0% | |
| ! | TTATTGGTTGAAGAACCTCA+AGG | - | chr3_1:71765606-71765625 | Msa0372920:intron | 35.0% |
| TATACTGCTATTCCCATGAA+AGG | + | chr3_1:71765642-71765661 | None:intergenic | 35.0% | |
| AGCACTTGTAAGTTGTAAGT+GGG | + | chr3_1:71765666-71765685 | None:intergenic | 35.0% | |
| AAGCACTTGTAAGTTGTAAG+TGG | + | chr3_1:71765667-71765686 | None:intergenic | 35.0% | |
| !! | CAATTGTTTGGCTCTTTACT+CGG | - | chr3_1:71765705-71765724 | Msa0372920:intron | 35.0% |
| AGTTGCAACAAAGCTATTAC+AGG | + | chr3_1:71765755-71765774 | None:intergenic | 35.0% | |
| ! | TTGTTCCTTTTGTGACTGTA+AGG | - | chr3_1:71765821-71765840 | Msa0372920:intron | 35.0% |
| !!! | TAAGGCTTTGTTTGCGATTT+TGG | - | chr3_1:71765839-71765858 | Msa0372920:intron | 35.0% |
| !!! | AGGGGAAAGTTTTGGAAAAA+AGG | - | chr3_1:71765872-71765891 | Msa0372920:intron | 35.0% |
| GCAAGTGGAAGAAATAACAT+TGG | - | chr3_1:71765900-71765919 | Msa0372920:intron | 35.0% | |
| TGGAAGAAATAACATTGGGA+GGG | - | chr3_1:71765905-71765924 | Msa0372920:intron | 35.0% | |
| ATACAAAACCCTCCTCATAT+AGG | - | chr3_1:71765960-71765979 | Msa0372920:intron | 35.0% | |
| TACAAAACCCTCCTCATATA+GGG | - | chr3_1:71765961-71765980 | Msa0372920:intron | 35.0% | |
| !!! | CTTTTTAGTTCCCCTATATG+AGG | + | chr3_1:71765975-71765994 | None:intergenic | 35.0% |
| GGGGAACTAAAAAGTTGTAT+TGG | - | chr3_1:71765981-71766000 | Msa0372920:intron | 35.0% | |
| TAAAAAGTTGTATTGGGGGA+GGG | - | chr3_1:71765988-71766007 | Msa0372920:intron | 35.0% | |
| GTGGAAAATATAGAGGGAAA+TGG | + | chr3_1:71766156-71766175 | None:intergenic | 35.0% | |
| GTAAAAGCTGTAGATTTCGA+GGG | + | chr3_1:71766424-71766443 | None:intergenic | 35.0% | |
| AGTAAAAGCTGTAGATTTCG+AGG | + | chr3_1:71766425-71766444 | None:intergenic | 35.0% | |
| !! | TGAAGATTCCTCAGTTTTGA+AGG | - | chr3_1:71766445-71766464 | Msa0372920:intron | 35.0% |
| TGATATTTACAAGGTTGGAG+CGG | - | chr3_1:71766576-71766595 | Msa0372920:intron | 35.0% | |
| TATCACGCTAATCAAAAGCT+AGG | - | chr3_1:71766670-71766689 | Msa0372920:intron | 35.0% | |
| AAAAGTTTCTTTGTGCCATC+AGG | + | chr3_1:71766834-71766853 | None:intergenic | 35.0% | |
| ! | TTTTTATGCCCTTCCAAAAC+TGG | - | chr3_1:71766851-71766870 | Msa0372920:CDS | 35.0% |
| ATAACATAAGAATGGTGAGC+AGG | + | chr3_1:71766917-71766936 | None:intergenic | 35.0% | |
| ! | TTTTCCTTATCTCTGGATAC+AGG | + | chr3_1:71766971-71766990 | None:intergenic | 35.0% |
| GTATCCAGAGATAAGGAAAA+TGG | - | chr3_1:71766971-71766990 | Msa0372920:intron | 35.0% | |
| AACATTCCATTCGTTTAGTG+GGG | + | chr3_1:71767006-71767025 | None:intergenic | 35.0% | |
| GAACATTCCATTCGTTTAGT+GGG | + | chr3_1:71767007-71767026 | None:intergenic | 35.0% | |
| TGAACATTCCATTCGTTTAG+TGG | + | chr3_1:71767008-71767027 | None:intergenic | 35.0% | |
| ATGACTAGTGGAGAAGAAAA+TGG | + | chr3_1:71767550-71767569 | None:intergenic | 35.0% | |
| ! | AGAACTGCTGAATAGTGTTT+TGG | - | chr3_1:71767758-71767777 | Msa0372920:intron | 35.0% |
| AAGCCCAGCAAAATAAGAAT+GGG | - | chr3_1:71768208-71768227 | Msa0372920:CDS | 35.0% | |
| !!! | TTCCCCATTCTTATTTTGCT+GGG | + | chr3_1:71768214-71768233 | None:intergenic | 35.0% |
| !!! | ATTCCCCATTCTTATTTTGC+TGG | + | chr3_1:71768215-71768234 | None:intergenic | 35.0% |
| GCAAAATAAGAATGGGGAAT+TGG | - | chr3_1:71768215-71768234 | Msa0372920:CDS | 35.0% | |
| AGTTGCTCCTTTGACAAATA+AGG | + | chr3_1:71768247-71768266 | None:intergenic | 35.0% | |
| GGTTTCTCTATCAGGTAATA+AGG | - | chr3_1:71768299-71768318 | Msa0372920:intron | 35.0% | |
| TTTGAGTGATTAAGAGATGG+AGG | + | chr3_1:71768691-71768710 | None:intergenic | 35.0% | |
| GTGTTTGAGTGATTAAGAGA+TGG | + | chr3_1:71768694-71768713 | None:intergenic | 35.0% | |
| TACGGGGACATGATAAAATA+AGG | + | chr3_1:71768840-71768859 | None:intergenic | 35.0% | |
| ! | TTACTATTTAGGACTCGTAC+GGG | + | chr3_1:71768857-71768876 | None:intergenic | 35.0% |
| GTTTGAAAACAAGATGAGGT+TGG | + | chr3_1:71768904-71768923 | None:intergenic | 35.0% | |
| TACAAGAACGGTTGTATTAC+TGG | + | chr3_1:71768962-71768981 | None:intergenic | 35.0% | |
| GACAAAAGTAGTGAAGTTGA+TGG | - | chr3_1:71769029-71769048 | Msa0372920:CDS | 35.0% | |
| TCCAGTAGACTTGATTTCTT+GGG | + | chr3_1:71769182-71769201 | None:intergenic | 35.0% | |
| ATCCAGTAGACTTGATTTCT+TGG | + | chr3_1:71769183-71769202 | None:intergenic | 35.0% | |
| TCAAGATCTTCCTGGGATAA+AGG | + | chr3_1:71764320-71764339 | None:intergenic | 40.0% | |
| AATGGCTTCAAGATCTTCCT+GGG | + | chr3_1:71764327-71764346 | None:intergenic | 40.0% | |
| ! | TAATCAATATAGTGGGGGAG+AGG | + | chr3_1:71764524-71764543 | None:intergenic | 40.0% |
| ! | CTATGAGCCAGTTTGAAACT+TGG | + | chr3_1:71764853-71764872 | None:intergenic | 40.0% |
| !! | GTGCTTTGTTACCGTTTTAC+TGG | - | chr3_1:71764944-71764963 | Msa0372920:intron | 40.0% |
| CTGGCTTAATTGGAAGGAAA+CGG | - | chr3_1:71764963-71764982 | Msa0372920:intron | 40.0% | |
| TATGAGATTCAGGCTCAGTT+TGG | + | chr3_1:71765007-71765026 | None:intergenic | 40.0% | |
| TGCAAGGCCATTTAAAGATG+AGG | - | chr3_1:71765156-71765175 | Msa0372920:intron | 40.0% | |
| GTGGGAAAATTATGTACAGC+AGG | - | chr3_1:71765198-71765217 | Msa0372920:CDS | 40.0% | |
| CAGCAGGACATTTAATGATG+TGG | - | chr3_1:71765214-71765233 | Msa0372920:CDS | 40.0% | |
| CACTCAATGTCAAATCCGAT+TGG | + | chr3_1:71765302-71765321 | None:intergenic | 40.0% | |
| CAATCGGATTTGACATTGAG+TGG | - | chr3_1:71765300-71765319 | Msa0372920:intron | 40.0% | |
| !! | AACCAACCTCTTTTGAAGGT+GGG | + | chr3_1:71765329-71765348 | None:intergenic | 40.0% |
| ! | ACCTTCAAAAGAGGTTGGTT+CGG | - | chr3_1:71765329-71765348 | Msa0372920:intron | 40.0% |
| TAGTATGCCTACAAGAGTGA+AGG | - | chr3_1:71765478-71765497 | Msa0372920:intron | 40.0% | |
| TCAACTTCCTTCACTCTTGT+AGG | + | chr3_1:71765488-71765507 | None:intergenic | 40.0% | |
| ! | TTTGTATCTGTTTGGGACCA+CGG | - | chr3_1:71765529-71765548 | Msa0372920:intron | 40.0% |
| ! | ATCAACCTAGTTGGTTTCTC+TGG | + | chr3_1:71765556-71765575 | None:intergenic | 40.0% |
| !! | GAGAAACCAACTAGGTTGAT+AGG | - | chr3_1:71765556-71765575 | Msa0372920:intron | 40.0% |
| GGAATTCCTATCAACCTAGT+TGG | + | chr3_1:71765565-71765584 | None:intergenic | 40.0% | |
| ! | AAAGGACGTTTTCTTCCTTG+AGG | + | chr3_1:71765624-71765643 | None:intergenic | 40.0% |
| AGGAAGAAAACGTCCTTTCA+TGG | - | chr3_1:71765626-71765645 | Msa0372920:intron | 40.0% | |
| GGAAGAAAACGTCCTTTCAT+GGG | - | chr3_1:71765627-71765646 | Msa0372920:intron | 40.0% | |
| TTACTCGGTCACATAGCTTA+TGG | - | chr3_1:71765720-71765739 | Msa0372920:intron | 40.0% | |
| CAAAGCCTTACAGTCACAAA+AGG | + | chr3_1:71765829-71765848 | None:intergenic | 40.0% | |
| !!! | GCTTTGTTTGCGATTTTGGA+GGG | - | chr3_1:71765843-71765862 | Msa0372920:intron | 40.0% |
| !! | CTTTGTTTGCGATTTTGGAG+GGG | - | chr3_1:71765844-71765863 | Msa0372920:intron | 40.0% |
| GTGGAAGAAATAACATTGGG+AGG | - | chr3_1:71765904-71765923 | Msa0372920:intron | 40.0% | |
| GGAAGAAATAACATTGGGAG+GGG | - | chr3_1:71765906-71765925 | Msa0372920:intron | 40.0% | |
| ACAAAACCCTCCTCATATAG+GGG | - | chr3_1:71765962-71765981 | Msa0372920:intron | 40.0% | |
| TTAGTTCCCCTATATGAGGA+GGG | + | chr3_1:71765971-71765990 | None:intergenic | 40.0% | |
| ! | TTTAGTTCCCCTATATGAGG+AGG | + | chr3_1:71765972-71765991 | None:intergenic | 40.0% |
| CTAAAAAGTTGTATTGGGGG+AGG | - | chr3_1:71765987-71766006 | Msa0372920:intron | 40.0% | |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr3_1:71766211-71766230 | None:intergenic | 40.0% |
| GATATTTACAAGGTTGGAGC+GGG | - | chr3_1:71766577-71766596 | Msa0372920:intron | 40.0% | |
| ATATTTACAAGGTTGGAGCG+GGG | - | chr3_1:71766578-71766597 | Msa0372920:intron | 40.0% | |
| AAGGTCTTCCACACCTTTAA+TGG | + | chr3_1:71766647-71766666 | None:intergenic | 40.0% | |
| !!! | TTAACCAGCCAGTTTTGGAA+GGG | + | chr3_1:71766862-71766881 | None:intergenic | 40.0% |
| ! | TCATGTTAACCAGCCAGTTT+TGG | + | chr3_1:71766867-71766886 | None:intergenic | 40.0% |
| TAAGAATGGTGAGCAGGTTT+GGG | + | chr3_1:71766911-71766930 | None:intergenic | 40.0% | |
| ATAAGAATGGTGAGCAGGTT+TGG | + | chr3_1:71766912-71766931 | None:intergenic | 40.0% | |
| TTATGACAGGGAGTCTATGT+AGG | - | chr3_1:71767070-71767089 | Msa0372920:CDS | 40.0% | |
| ATAGAGAGGTAGGTCATATG+TGG | + | chr3_1:71767170-71767189 | None:intergenic | 40.0% | |
| ! | TTTAAAGCGGATAGAGAGGT+AGG | + | chr3_1:71767180-71767199 | None:intergenic | 40.0% |
| TTGTGCAAGTGACAAAACTC+TGG | + | chr3_1:71767403-71767422 | None:intergenic | 40.0% | |
| GCAACAATACAGATGACTAG+TGG | + | chr3_1:71767562-71767581 | None:intergenic | 40.0% | |
| AAACAATCAAGCAGACGCAT+GGG | + | chr3_1:71768016-71768035 | None:intergenic | 40.0% | |
| AAAACAATCAAGCAGACGCA+TGG | + | chr3_1:71768017-71768036 | None:intergenic | 40.0% | |
| GAAGCCCAGCAAAATAAGAA+TGG | - | chr3_1:71768207-71768226 | Msa0372920:CDS | 40.0% | |
| AGCCCAGCAAAATAAGAATG+GGG | - | chr3_1:71768209-71768228 | Msa0372920:CDS | 40.0% | |
| ! | GGAGACTCCTTATTTGTCAA+AGG | - | chr3_1:71768237-71768256 | Msa0372920:CDS | 40.0% |
| TGCTTCTTGGTTTCTCTATC+AGG | - | chr3_1:71768291-71768310 | Msa0372920:CDS | 40.0% | |
| TTAATCTAGTTGCAGGGGAT+TGG | - | chr3_1:71768430-71768449 | Msa0372920:intron | 40.0% | |
| CATGGAGTGATGTACACTAA+TGG | + | chr3_1:71768582-71768601 | None:intergenic | 40.0% | |
| AGTGATTAAGAGATGGAGGA+TGG | + | chr3_1:71768687-71768706 | None:intergenic | 40.0% | |
| ! | TACTATTTAGGACTCGTACG+GGG | + | chr3_1:71768856-71768875 | None:intergenic | 40.0% |
| ATGAGATACGGTCATTGTTG+CGG | + | chr3_1:71769059-71769078 | None:intergenic | 40.0% | |
| CACTACACAGACATGAGATA+CGG | + | chr3_1:71769071-71769090 | None:intergenic | 40.0% | |
| TCCCAAGAAATCAAGTCTAC+TGG | - | chr3_1:71769178-71769197 | Msa0372920:CDS | 40.0% | |
| ! | GGATGATTCAGTCCCTTTTA+TGG | - | chr3_1:71769199-71769218 | Msa0372920:CDS | 40.0% |
| ATCGTTCAGGCGAAGGAAAA+AGG | - | chr3_1:71764243-71764262 | Msa0372920:three_prime_UTR | 45.0% | |
| TCGTTCAGGCGAAGGAAAAA+GGG | - | chr3_1:71764244-71764263 | Msa0372920:three_prime_UTR | 45.0% | |
| CAATGGCTTCAAGATCTTCC+TGG | + | chr3_1:71764328-71764347 | None:intergenic | 45.0% | |
| AGATTGAAGAGTGGCGTCAA+TGG | + | chr3_1:71764345-71764364 | None:intergenic | 45.0% | |
| GTGAGAAAGAGAGAGAAGGT+GGG | + | chr3_1:71764478-71764497 | None:intergenic | 45.0% | |
| GAAGGTGAGAAAGAGAGAGA+AGG | + | chr3_1:71764482-71764501 | None:intergenic | 45.0% | |
| TCACTGTTCCTGCATTCTGT+TGG | - | chr3_1:71764573-71764592 | Msa0372920:intron | 45.0% | |
| CCTAAATGCCAACAGAATGC+AGG | + | chr3_1:71764584-71764603 | None:intergenic | 45.0% | |
| CCTGCATTCTGTTGGCATTT+AGG | - | chr3_1:71764581-71764600 | Msa0372920:intron | 45.0% | |
| ! | GAGCCAGTTTGAAACTTGGA+TGG | + | chr3_1:71764849-71764868 | None:intergenic | 45.0% |
| !! | GAACCAACCTCTTTTGAAGG+TGG | + | chr3_1:71765330-71765349 | None:intergenic | 45.0% |
| ! | ACCGAACCAACCTCTTTTGA+AGG | + | chr3_1:71765333-71765352 | None:intergenic | 45.0% |
| !!! | GGCTTTGTTTGCGATTTTGG+AGG | - | chr3_1:71765842-71765861 | Msa0372920:intron | 45.0% |
| !! | TTTGCGATTTTGGAGGGGAA+GGG | - | chr3_1:71765849-71765868 | Msa0372920:intron | 45.0% |
| GGAAAAAAGGAAGGAGCAAG+TGG | - | chr3_1:71765885-71765904 | Msa0372920:intron | 45.0% | |
| AGAAATAACATTGGGAGGGG+AGG | - | chr3_1:71765909-71765928 | Msa0372920:intron | 45.0% | |
| GAAATAACATTGGGAGGGGA+GGG | - | chr3_1:71765910-71765929 | Msa0372920:intron | 45.0% | |
| TGGGGGGTGGAAAATATAGA+GGG | + | chr3_1:71766162-71766181 | None:intergenic | 45.0% | |
| TTGGGGGGTGGAAAATATAG+AGG | + | chr3_1:71766163-71766182 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr3_1:71766207-71766226 | None:intergenic | 45.0% |
| CACGCTAATCAAAAGCTAGG+TGG | - | chr3_1:71766673-71766692 | Msa0372920:intron | 45.0% | |
| GCTAATCAAAAGCTAGGTGG+AGG | - | chr3_1:71766676-71766695 | Msa0372920:intron | 45.0% | |
| GATGCAAGACCCCACTTATT+CGG | + | chr3_1:71766703-71766722 | None:intergenic | 45.0% | |
| AACCGACTGGATTGTGTACA+TGG | - | chr3_1:71766778-71766797 | Msa0372920:CDS | 45.0% | |
| ACCGACTGGATTGTGTACAT+GGG | - | chr3_1:71766779-71766798 | Msa0372920:CDS | 45.0% | |
| TCCCATGTACACAATCCAGT+CGG | + | chr3_1:71766783-71766802 | None:intergenic | 45.0% | |
| !!! | GTTAACCAGCCAGTTTTGGA+AGG | + | chr3_1:71766863-71766882 | None:intergenic | 45.0% |
| CAGGCCGAAGAAACTTTCAA+AGG | + | chr3_1:71766952-71766971 | None:intergenic | 45.0% | |
| ! | GCGTCCATTTTCCTTATCTC+TGG | + | chr3_1:71766978-71766997 | None:intergenic | 45.0% |
| ACAGGGAGTCTATGTAGGTT+TGG | - | chr3_1:71767075-71767094 | Msa0372920:CDS | 45.0% | |
| GTCATATGTGGCATTAGAGC+TGG | + | chr3_1:71767158-71767177 | None:intergenic | 45.0% | |
| AGCAGACGCATGGGAATTAA+GGG | + | chr3_1:71768007-71768026 | None:intergenic | 45.0% | |
| AAGCAGACGCATGGGAATTA+AGG | + | chr3_1:71768008-71768027 | None:intergenic | 45.0% | |
| TCAAATTTGTCCTCTCCGCA+AGG | + | chr3_1:71768084-71768103 | None:intergenic | 45.0% | |
| TGCGGAGAGGACAAATTTGA+AGG | - | chr3_1:71768084-71768103 | Msa0372920:intron | 45.0% | |
| !! | CCAAGAAGCAAAAGCATCTG+TGG | + | chr3_1:71768281-71768300 | None:intergenic | 45.0% |
| ! | CCACAGATGCTTTTGCTTCT+TGG | - | chr3_1:71768278-71768297 | Msa0372920:CDS | 45.0% |
| GTACACTAATGGCAACAGAG+TGG | + | chr3_1:71768571-71768590 | None:intergenic | 45.0% | |
| !! | CGATGATGATGGAGAGTGTT+GGG | + | chr3_1:71768638-71768657 | None:intergenic | 45.0% |
| GATTAAGAGATGGAGGATGG+CGG | + | chr3_1:71768684-71768703 | None:intergenic | 45.0% | |
| ! | ACTTTTGTCGGCAACTTCCT+GGG | + | chr3_1:71769018-71769037 | None:intergenic | 45.0% |
| ! | TACTTTTGTCGGCAACTTCC+TGG | + | chr3_1:71769019-71769038 | None:intergenic | 45.0% |
| ! | GATTCAGTCCCTTTTATGGC+CGG | - | chr3_1:71769203-71769222 | Msa0372920:CDS | 45.0% |
| ! | TTGATGGATCGTTCAGGCGA+AGG | - | chr3_1:71764236-71764255 | Msa0372920:three_prime_UTR | 50.0% |
| TTCAGGCGAAGGAAAAAGGG+AGG | - | chr3_1:71764247-71764266 | Msa0372920:three_prime_UTR | 50.0% | |
| GGGGAGAGAAGATTGAAGAG+TGG | + | chr3_1:71764354-71764373 | None:intergenic | 50.0% | |
| !! | GAAGGGACGTTTGGTAGTGA+TGG | + | chr3_1:71764387-71764406 | None:intergenic | 50.0% |
| GTGAGAGATGAAGGGACGTT+TGG | + | chr3_1:71764396-71764415 | None:intergenic | 50.0% | |
| TGAAGAGCGATGAGCGATGT+GGG | + | chr3_1:71764452-71764471 | None:intergenic | 50.0% | |
| TTGAAGAGCGATGAGCGATG+TGG | + | chr3_1:71764453-71764472 | None:intergenic | 50.0% | |
| GGTGAGAAAGAGAGAGAAGG+TGG | + | chr3_1:71764479-71764498 | None:intergenic | 50.0% | |
| CTCTCTTTCTCACCTTCTCC+AGG | - | chr3_1:71764485-71764504 | Msa0372920:intron | 50.0% | |
| ! | AATATAGTGGGGGAGAGGAG+AGG | + | chr3_1:71764519-71764538 | None:intergenic | 50.0% |
| GTTTACGCACGCACATGACA+TGG | - | chr3_1:71764645-71764664 | Msa0372920:intron | 50.0% | |
| TGGAGACCCACCTTCAAAAG+AGG | - | chr3_1:71765320-71765339 | Msa0372920:intron | 50.0% | |
| GACCCACCTTCAAAAGAGGT+TGG | - | chr3_1:71765324-71765343 | Msa0372920:intron | 50.0% | |
| ! | TAGTTGGTTTCTCTGGTCCG+TGG | + | chr3_1:71765549-71765568 | None:intergenic | 50.0% |
| ACGGACCAGAGAAACCAACT+AGG | - | chr3_1:71765548-71765567 | Msa0372920:intron | 50.0% | |
| !! | GTTTGCGATTTTGGAGGGGA+AGG | - | chr3_1:71765848-71765867 | Msa0372920:intron | 50.0% |
| ! | GTTGTATTGGGGGAGGGTTT+TGG | - | chr3_1:71765994-71766013 | Msa0372920:intron | 50.0% |
| !!! | TATTGGGGGAGGGTTTTGGA+GGG | - | chr3_1:71765998-71766017 | Msa0372920:intron | 50.0% |
| TTTGGGAGTTTGGAGGGAAG+GGG | + | chr3_1:71766201-71766220 | None:intergenic | 50.0% | |
| GTTTGGGAGTTTGGAGGGAA+GGG | + | chr3_1:71766202-71766221 | None:intergenic | 50.0% | |
| TGTTTGGGAGTTTGGAGGGA+AGG | + | chr3_1:71766203-71766222 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr3_1:71766208-71766227 | None:intergenic | 50.0% |
| ACTTCTACAGGTGTTCCACC+CGG | - | chr3_1:71766326-71766345 | Msa0372920:intron | 50.0% | |
| !!! | TGCATCACTGCTGTTTTCCC+GGG | + | chr3_1:71766347-71766366 | None:intergenic | 50.0% |
| !!! | CTGCATCACTGCTGTTTTCC+CGG | + | chr3_1:71766348-71766367 | None:intergenic | 50.0% |
| GATTGGCGGTGATGCTTCTA+AGG | - | chr3_1:71766600-71766619 | Msa0372920:intron | 50.0% | |
| TAGGTGGAGGTCCGAATAAG+TGG | - | chr3_1:71766689-71766708 | Msa0372920:intron | 50.0% | |
| AGGTGGAGGTCCGAATAAGT+GGG | - | chr3_1:71766690-71766709 | Msa0372920:intron | 50.0% | |
| TATGCCCTTCCAAAACTGGC+TGG | - | chr3_1:71766855-71766874 | Msa0372920:CDS | 50.0% | |
| ! | GCAGGTTTGGGACATTGAAG+TGG | + | chr3_1:71766899-71766918 | None:intergenic | 50.0% |
| TCGGCCTGTATCCAGAGATA+AGG | - | chr3_1:71766964-71766983 | Msa0372920:intron | 50.0% | |
| CTGTCTCCCCACTAAACGAA+TGG | - | chr3_1:71766997-71767016 | Msa0372920:intron | 50.0% | |
| !!! | TTTTCTTTGGCCTTGCGGAG+AGG | - | chr3_1:71768071-71768090 | Msa0372920:intron | 50.0% |
| !! | GTAGAGGGCATCAAGTGCAA+GGG | + | chr3_1:71768516-71768535 | None:intergenic | 50.0% |
| TGGGCAGCAGTAATGGTAGA+GGG | + | chr3_1:71768531-71768550 | None:intergenic | 50.0% | |
| ATGGGCAGCAGTAATGGTAG+AGG | + | chr3_1:71768532-71768551 | None:intergenic | 50.0% | |
| AGATGCATGGGCAGCAGTAA+TGG | + | chr3_1:71768538-71768557 | None:intergenic | 50.0% | |
| TAATGGCAACAGAGTGGCAG+TGG | + | chr3_1:71768565-71768584 | None:intergenic | 50.0% | |
| TGGTGAAAGGTGGTCAGTGA+CGG | + | chr3_1:71768609-71768628 | None:intergenic | 50.0% | |
| TGTTGGGTGGCAATGGTGAA+AGG | + | chr3_1:71768622-71768641 | None:intergenic | 50.0% | |
| !! | TGATGATGGAGAGTGTTGGG+TGG | + | chr3_1:71768635-71768654 | None:intergenic | 50.0% |
| !! | GCGATGATGATGGAGAGTGT+TGG | + | chr3_1:71768639-71768658 | None:intergenic | 50.0% |
| TAAAGATCTCCCAGATGCCC+AGG | - | chr3_1:71768998-71769017 | Msa0372920:CDS | 50.0% | |
| AGGCGAAGGAAAAAGGGAGG+AGG | - | chr3_1:71764250-71764269 | Msa0372920:three_prime_UTR | 55.0% | |
| GGAAAAAGGGAGGAGGAGCT+TGG | - | chr3_1:71764257-71764276 | Msa0372920:three_prime_UTR | 55.0% | |
| AGGAGGAGCTTGGTTTCGAG+CGG | - | chr3_1:71764267-71764286 | Msa0372920:three_prime_UTR | 55.0% | |
| CTCGCATTCGCACACGAATG+AGG | + | chr3_1:71764297-71764316 | None:intergenic | 55.0% | |
| CGAATGCGAGCCTTTATCCC+AGG | - | chr3_1:71764307-71764326 | Msa0372920:three_prime_UTR | 55.0% | |
| !! | TAGTGATGGCGGTGGGTTTG+GGG | + | chr3_1:71764373-71764392 | None:intergenic | 55.0% |
| !! | GTAGTGATGGCGGTGGGTTT+GGG | + | chr3_1:71764374-71764393 | None:intergenic | 55.0% |
| !! | CGTTTGGTAGTGATGGCGGT+GGG | + | chr3_1:71764380-71764399 | None:intergenic | 55.0% |
| !! | ACGTTTGGTAGTGATGGCGG+TGG | + | chr3_1:71764381-71764400 | None:intergenic | 55.0% |
| !! | GGGACGTTTGGTAGTGATGG+CGG | + | chr3_1:71764384-71764403 | None:intergenic | 55.0% |
| GGGGGAGAGTGAGAGATGAA+GGG | + | chr3_1:71764404-71764423 | None:intergenic | 55.0% | |
| AGGGGGAGAGTGAGAGATGA+AGG | + | chr3_1:71764405-71764424 | None:intergenic | 55.0% | |
| TGAGCGATGTGGGTAAGCGA+CGG | + | chr3_1:71764442-71764461 | None:intergenic | 55.0% | |
| !! | CGATTTTGGAGGGGAAGGGA+GGG | - | chr3_1:71765853-71765872 | Msa0372920:intron | 55.0% |
| !! | GATTTTGGAGGGGAAGGGAG+GGG | - | chr3_1:71765854-71765873 | Msa0372920:intron | 55.0% |
| ! | GGGAAGGGAGGGGAAAGTTT+TGG | - | chr3_1:71765864-71765883 | Msa0372920:intron | 55.0% |
| !! | GTATTGGGGGAGGGTTTTGG+AGG | - | chr3_1:71765997-71766016 | Msa0372920:intron | 55.0% |
| !! | AAGGAAGGAAGGGCTTTGGG+GGG | + | chr3_1:71766178-71766197 | None:intergenic | 55.0% |
| ! | GAAGGAAGGAAGGGCTTTGG+GGG | + | chr3_1:71766179-71766198 | None:intergenic | 55.0% |
| GGAAGGAAGGAAGGGCTTTG+GGG | + | chr3_1:71766180-71766199 | None:intergenic | 55.0% | |
| GGGAAGGAAGGAAGGGCTTT+GGG | + | chr3_1:71766181-71766200 | None:intergenic | 55.0% | |
| AGGGAAGGGGAAGGAAGGAA+GGG | + | chr3_1:71766188-71766207 | None:intergenic | 55.0% | |
| TTTGGAGGGAAGGGGAAGGA+AGG | + | chr3_1:71766193-71766212 | None:intergenic | 55.0% | |
| CTTCTACAGGTGTTCCACCC+GGG | - | chr3_1:71766327-71766346 | Msa0372920:intron | 55.0% | |
| !!! | ATCACTGCTGTTTTCCCGGG+TGG | + | chr3_1:71766344-71766363 | None:intergenic | 55.0% |
| TACAAGGTTGGAGCGGGGAT+TGG | - | chr3_1:71766583-71766602 | Msa0372920:intron | 55.0% | |
| GGTGGAGGTCCGAATAAGTG+GGG | - | chr3_1:71766691-71766710 | Msa0372920:intron | 55.0% | |
| AAGTGCAAGGGTGGAAGGCA+GGG | + | chr3_1:71768504-71768523 | None:intergenic | 55.0% | |
| GCATCAAGTGCAAGGGTGGA+AGG | + | chr3_1:71768509-71768528 | None:intergenic | 55.0% | |
| !! | GGTAGAGGGCATCAAGTGCA+AGG | + | chr3_1:71768517-71768536 | None:intergenic | 55.0% |
| ! | GGCAGTGGTGGAAGATGCAT+GGG | + | chr3_1:71768550-71768569 | None:intergenic | 55.0% |
| ! | TGGCAGTGGTGGAAGATGCA+TGG | + | chr3_1:71768551-71768570 | None:intergenic | 55.0% |
| TGGGTGGCAATGGTGAAAGG+TGG | + | chr3_1:71768619-71768638 | None:intergenic | 55.0% | |
| !! | TGGAGAGTGTTGGGTGGCAA+TGG | + | chr3_1:71768629-71768648 | None:intergenic | 55.0% |
| CAGGGTGACAGCGATGATGA+TGG | + | chr3_1:71768649-71768668 | None:intergenic | 55.0% | |
| ! | TGGAGGATGGCGGTGATGAA+GGG | + | chr3_1:71768674-71768693 | None:intergenic | 55.0% |
| ! | ATGGAGGATGGCGGTGATGA+AGG | + | chr3_1:71768675-71768694 | None:intergenic | 55.0% |
| !! | GGTAGTGATGGCGGTGGGTT+TGG | + | chr3_1:71764375-71764394 | None:intergenic | 60.0% |
| GAGGAAGTGGGACCTGGAGA+AGG | + | chr3_1:71764500-71764519 | None:intergenic | 60.0% | |
| AGAGGAGAGGAAGTGGGACC+TGG | + | chr3_1:71764506-71764525 | None:intergenic | 60.0% | |
| TGGGGGAGAGGAGAGGAAGT+GGG | + | chr3_1:71764512-71764531 | None:intergenic | 60.0% | |
| !! | GCGATTTTGGAGGGGAAGGG+AGG | - | chr3_1:71765852-71765871 | Msa0372920:intron | 60.0% |
| ACATTGGGAGGGGAGGGCTT+TGG | - | chr3_1:71765916-71765935 | Msa0372920:intron | 60.0% | |
| CATTGGGAGGGGAGGGCTTT+GGG | - | chr3_1:71765917-71765936 | Msa0372920:intron | 60.0% | |
| ATTGGGAGGGGAGGGCTTTG+GGG | - | chr3_1:71765918-71765937 | Msa0372920:intron | 60.0% | |
| GGGGAAGGAAGGAAGGGCTT+TGG | + | chr3_1:71766182-71766201 | None:intergenic | 60.0% | |
| GAGGGAAGGGGAAGGAAGGA+AGG | + | chr3_1:71766189-71766208 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGAAGGGGA+AGG | + | chr3_1:71766197-71766216 | None:intergenic | 60.0% | |
| AAGGTTGGAGCGGGGATTGG+CGG | - | chr3_1:71766586-71766605 | Msa0372920:intron | 60.0% | |
| AAGGCAGGGAAGGGAGGAAG+AGG | + | chr3_1:71768490-71768509 | None:intergenic | 60.0% | |
| CAAGGGTGGAAGGCAGGGAA+GGG | + | chr3_1:71768499-71768518 | None:intergenic | 60.0% | |
| CAAGTGCAAGGGTGGAAGGC+AGG | + | chr3_1:71768505-71768524 | None:intergenic | 60.0% | |
| !! | GAGGGCATCAAGTGCAAGGG+TGG | + | chr3_1:71768513-71768532 | None:intergenic | 60.0% |
| TGGCAACAGAGTGGCAGTGG+TGG | + | chr3_1:71768562-71768581 | None:intergenic | 60.0% | |
| GTGGTCAGTGACGGCAGTCA+TGG | + | chr3_1:71768600-71768619 | None:intergenic | 60.0% | |
| ! | TGGCGGTGATGAAGGGTGCA+GGG | + | chr3_1:71768667-71768686 | None:intergenic | 60.0% |
| ! | ATGGCGGTGATGAAGGGTGC+AGG | + | chr3_1:71768668-71768687 | None:intergenic | 60.0% |
| CGGCAACTTCCTGGGCATCT+GGG | + | chr3_1:71769010-71769029 | None:intergenic | 60.0% | |
| TCGGCAACTTCCTGGGCATC+TGG | + | chr3_1:71769011-71769030 | None:intergenic | 60.0% | |
| GCGATGTGGGTAAGCGACGG+CGG | + | chr3_1:71764439-71764458 | None:intergenic | 65.0% | |
| GTGGGGGAGAGGAGAGGAAG+TGG | + | chr3_1:71764513-71764532 | None:intergenic | 65.0% | |
| ! | TTGGGAGGGGAGGGCTTTGG+GGG | - | chr3_1:71765919-71765938 | Msa0372920:intron | 65.0% |
| !! | GAAGGAAGGGCTTTGGGGGG+TGG | + | chr3_1:71766175-71766194 | None:intergenic | 65.0% |
| GCAAGGGTGGAAGGCAGGGA+AGG | + | chr3_1:71768500-71768519 | None:intergenic | 65.0% | |
| GTAAGCGACGGCGGCTGCTG+CGG | + | chr3_1:71764430-71764449 | None:intergenic | 70.0% | |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | - | chr3_1:71765920-71765939 | Msa0372920:intron | 70.0% |
| GGGTGGAAGGCAGGGAAGGG+AGG | + | chr3_1:71768496-71768515 | None:intergenic | 70.0% | |
| !! | GGGAGGGGAGGGCTTTGGGG+GGG | - | chr3_1:71765921-71765940 | Msa0372920:intron | 75.0% |
| ! | ACGGCGGCTGCTGCGGCGAG+GGG | + | chr3_1:71764423-71764442 | None:intergenic | 80.0% |
| ! | GACGGCGGCTGCTGCGGCGA+GGG | + | chr3_1:71764424-71764443 | None:intergenic | 80.0% |
| ! | CGGCGGCTGCTGCGGCGAGG+GGG | + | chr3_1:71764422-71764441 | None:intergenic | 85.0% |
| ! | CGACGGCGGCTGCTGCGGCG+AGG | + | chr3_1:71764425-71764444 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 71764228 | 71769249 | 71764228 | ID=Msa0372920;Name=Msa0372920 |
| chr3_1 | mRNA | 71764228 | 71769249 | 71764228 | ID=Msa0372920-mRNA-1;Parent=Msa0372920;Name=Msa0372920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=11|1|1|1|1|1|6|182|308 |
| chr3_1 | exon | 71764228 | 71764484 | 71764228 | ID=Msa0372920-mRNA-1:exon:15805;Parent=Msa0372920-mRNA-1 |
| chr3_1 | exon | 71765165 | 71765275 | 71765165 | ID=Msa0372920-mRNA-1:exon:15804;Parent=Msa0372920-mRNA-1 |
| chr3_1 | exon | 71766727 | 71766888 | 71766727 | ID=Msa0372920-mRNA-1:exon:15803;Parent=Msa0372920-mRNA-1 |
| chr3_1 | exon | 71767011 | 71767141 | 71767011 | ID=Msa0372920-mRNA-1:exon:15802;Parent=Msa0372920-mRNA-1 |
| chr3_1 | exon | 71768136 | 71768315 | 71768136 | ID=Msa0372920-mRNA-1:exon:15801;Parent=Msa0372920-mRNA-1 |
| chr3_1 | exon | 71768971 | 71769249 | 71768971 | ID=Msa0372920-mRNA-1:exon:15800;Parent=Msa0372920-mRNA-1 |
| chr3_1 | five_prime_UTR | 71769239 | 71769249 | 71769239 | ID=Msa0372920-mRNA-1:five_prime_utr;Parent=Msa0372920-mRNA-1 |
| chr3_1 | CDS | 71768971 | 71769238 | 71768971 | ID=Msa0372920-mRNA-1:cds;Parent=Msa0372920-mRNA-1 |
| chr3_1 | CDS | 71768136 | 71768315 | 71768136 | ID=Msa0372920-mRNA-1:cds;Parent=Msa0372920-mRNA-1 |
| chr3_1 | CDS | 71767011 | 71767141 | 71767011 | ID=Msa0372920-mRNA-1:cds;Parent=Msa0372920-mRNA-1 |
| chr3_1 | CDS | 71766727 | 71766888 | 71766727 | ID=Msa0372920-mRNA-1:cds;Parent=Msa0372920-mRNA-1 |
| chr3_1 | CDS | 71765165 | 71765275 | 71765165 | ID=Msa0372920-mRNA-1:cds;Parent=Msa0372920-mRNA-1 |
| chr3_1 | CDS | 71764410 | 71764484 | 71764410 | ID=Msa0372920-mRNA-1:cds;Parent=Msa0372920-mRNA-1 |
| chr3_1 | three_prime_UTR | 71764228 | 71764409 | 71764228 | ID=Msa0372920-mRNA-1:three_prime_utr;Parent=Msa0372920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
