Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745640 | XP_024634043.1 | 94.855 | 311 | 13 | 1 | 1 | 308 | 1 | 311 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745640 | sp|Q84LH3|WEX_ARATH | 53.571 | 224 | 97 | 2 | 75 | 292 | 62 | 284 | 2.54e-79 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745640 | A0A396IWX4 | 94.855 | 311 | 13 | 1 | 1 | 308 | 1 | 311 | 0.0 | 541 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0745640 | Msa1296090 | 0.805250 | 1.461360e-49 | -8.615850e-47 |
| Msa0372920 | Msa0745640 | 0.872752 | 2.497783e-67 | -8.615850e-47 |
| Msa0421470 | Msa0745640 | 0.909854 | 3.590333e-82 | -8.615850e-47 |
| Msa0467450 | Msa0745640 | 0.836870 | 7.261815e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745640 | MtrunA17_Chr3g0121831 | 94.855 | 311 | 13 | 1 | 1 | 308 | 1 | 311 | 0.0 | 541 |
| Msa0745640 | MtrunA17_Chr7g0241401 | 39.860 | 143 | 82 | 4 | 135 | 275 | 84 | 224 | 1.91e-25 | 101 |
| Msa0745640 | MtrunA17_Chr7g0241341 | 35.862 | 145 | 90 | 3 | 137 | 280 | 45 | 187 | 3.23e-23 | 94.7 |
| Msa0745640 | MtrunA17_Chr7g0241411 | 36.986 | 146 | 88 | 4 | 137 | 280 | 80 | 223 | 1.10e-21 | 91.7 |
| Msa0745640 | MtrunA17_Chr4g0070431 | 34.731 | 167 | 100 | 6 | 118 | 280 | 38 | 199 | 2.82e-17 | 79.3 |
| Msa0745640 | MtrunA17_Chr7g0241391 | 33.846 | 130 | 82 | 3 | 154 | 280 | 81 | 209 | 2.52e-13 | 68.2 |
| Msa0745640 | MtrunA17_Chr1g0192551 | 33.133 | 166 | 88 | 8 | 137 | 291 | 375 | 528 | 3.06e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0745640 | AT4G13870.2 | 53.571 | 224 | 97 | 2 | 75 | 292 | 62 | 284 | 2.59e-80 | 245 |
| Msa0745640 | AT4G13870.1 | 53.571 | 224 | 94 | 3 | 75 | 292 | 62 | 281 | 6.96e-78 | 239 |
| Msa0745640 | AT4G13885.1 | 42.342 | 111 | 27 | 1 | 182 | 292 | 186 | 259 | 2.44e-19 | 86.3 |
| Msa0745640 | AT1G56310.2 | 32.727 | 165 | 91 | 6 | 137 | 290 | 381 | 536 | 1.48e-12 | 68.6 |
| Msa0745640 | AT1G56310.1 | 32.727 | 165 | 91 | 6 | 137 | 290 | 381 | 536 | 1.48e-12 | 68.6 |
Find 82 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTCTTGGTTTCTCTATC+AGG | 0.185259 | 5_1:-67446503 | Msa0745640:intron |
| GTAGTGATGGCGGTGGGTTT+GGG | 0.208962 | 5_1:+67450150 | None:intergenic |
| GGTAGTGATGGCGGTGGGTT+TGG | 0.223276 | 5_1:+67450149 | None:intergenic |
| TCGGCAACTTCCTGGGCATC+TGG | 0.234563 | 5_1:+67445786 | None:intergenic |
| GATTATTTCATATCCATTAA+AGG | 0.237423 | 5_1:-67448154 | Msa0745640:CDS |
| AGTTGCTCCTTTGACAAATA+AGG | 0.254115 | 5_1:+67446550 | None:intergenic |
| AAGGTCTTCCACACCTTTAA+TGG | 0.256939 | 5_1:+67448141 | None:intergenic |
| GTTCTTCATCTAATTCATTC+TGG | 0.263565 | 5_1:-67448390 | Msa0745640:CDS |
| GATTGGCGGTGATGCTTCTA+AGG | 0.264433 | 5_1:-67448185 | Msa0745640:CDS |
| GCAAAATAAGAATGGGGAAT+TGG | 0.279134 | 5_1:-67446579 | Msa0745640:CDS |
| CAGGTAACCTCAACTTTAAA+TGG | 0.281751 | 5_1:+67449621 | None:intergenic |
| TTCCCACAAAACTTCATTAC+AGG | 0.290923 | 5_1:+67449602 | None:intergenic |
| ATCCAGTAGACTTGATTTCT+TGG | 0.335829 | 5_1:+67445614 | None:intergenic |
| CAAAATAAGAATGGGGAATT+GGG | 0.341744 | 5_1:-67446578 | Msa0745640:CDS |
| GACGGCGGCTGCTGCGGCGA+GGG | 0.351741 | 5_1:+67450100 | None:intergenic |
| TCAAGATCTTCCTGGGATAA+AGG | 0.355915 | 5_1:+67450204 | None:intergenic |
| ATCGTTCAGGCGAAGGAAAA+AGG | 0.359248 | 5_1:-67450278 | Msa0745640:CDS |
| CTCTCTTTCTCACCTTCTCC+AGG | 0.359477 | 5_1:-67450036 | Msa0745640:intron |
| GATGCAAGACCCCACTTATT+CGG | 0.360319 | 5_1:+67448085 | None:intergenic |
| CAATGGCTTCAAGATCTTCC+TGG | 0.382197 | 5_1:+67450196 | None:intergenic |
| ACGGCGGCTGCTGCGGCGAG+GGG | 0.394600 | 5_1:+67450101 | None:intergenic |
| GTGAGAGATGAAGGGACGTT+TGG | 0.414413 | 5_1:+67450128 | None:intergenic |
| TCCAGTAGACTTGATTTCTT+GGG | 0.427807 | 5_1:+67445615 | None:intergenic |
| GATATTTACAAGGTTGGAGC+GGG | 0.430491 | 5_1:-67448208 | Msa0745640:intron |
| TACAAGGTTGGAGCGGGGAT+TGG | 0.439136 | 5_1:-67448202 | Msa0745640:intron |
| CAATCGGATTTGACATTGAG+TGG | 0.443247 | 5_1:-67449484 | Msa0745640:CDS |
| TCCCAAGAAATCAAGTCTAC+TGG | 0.444531 | 5_1:-67445616 | Msa0745640:three_prime_UTR |
| GGTGAGAAAGAGAGAGAAGG+TGG | 0.448106 | 5_1:+67450045 | None:intergenic |
| CGACGGCGGCTGCTGCGGCG+AGG | 0.448728 | 5_1:+67450099 | None:intergenic |
| AAGGTTGGAGCGGGGATTGG+CGG | 0.452888 | 5_1:-67448199 | Msa0745640:CDS |
| CGGCGGCTGCTGCGGCGAGG+GGG | 0.457764 | 5_1:+67450102 | None:intergenic |
| AAGCCCAGCAAAATAAGAAT+GGG | 0.463753 | 5_1:-67446586 | Msa0745640:CDS |
| TAGTGATGGCGGTGGGTTTG+GGG | 0.478100 | 5_1:+67450151 | None:intergenic |
| GTGGGAAAATTATGTACAGC+AGG | 0.478430 | 5_1:-67449586 | Msa0745640:CDS |
| TTTGATTAGCGTGATAAGAA+AGG | 0.480610 | 5_1:+67448122 | None:intergenic |
| TAGGTGGAGGTCCGAATAAG+TGG | 0.494543 | 5_1:-67448096 | Msa0745640:CDS |
| CGGCAACTTCCTGGGCATCT+GGG | 0.500387 | 5_1:+67445787 | None:intergenic |
| AGATTGAAGAGTGGCGTCAA+TGG | 0.502315 | 5_1:+67450179 | None:intergenic |
| GAAGCCCAGCAAAATAAGAA+TGG | 0.502994 | 5_1:-67446587 | Msa0745640:CDS |
| CACTCAATGTCAAATCCGAT+TGG | 0.505854 | 5_1:+67449485 | None:intergenic |
| TTGATGGATCGTTCAGGCGA+AGG | 0.513572 | 5_1:-67450285 | Msa0745640:CDS |
| TGCAAGGCCATTTAAAGTTG+AGG | 0.521982 | 5_1:-67449628 | Msa0745640:intron |
| GTAAGCGACGGCGGCTGCTG+CGG | 0.524183 | 5_1:+67450094 | None:intergenic |
| GGAGACTCCTTATTTGTCAA+AGG | 0.525820 | 5_1:-67446557 | Msa0745640:CDS |
| AGTAAAAGCTGTAGATTTCG+AGG | 0.526432 | 5_1:+67448363 | None:intergenic |
| TAAAGATCTCCCAGATGCCC+AGG | 0.529380 | 5_1:-67445796 | Msa0745640:CDS |
| GTGAGAAAGAGAGAGAAGGT+GGG | 0.530800 | 5_1:+67450046 | None:intergenic |
| CGTTTGGTAGTGATGGCGGT+GGG | 0.536538 | 5_1:+67450144 | None:intergenic |
| CTCGCATTCGCACACGAATG+AGG | 0.537585 | 5_1:+67450227 | None:intergenic |
| GGGGAGAGAAGATTGAAGAG+TGG | 0.538363 | 5_1:+67450170 | None:intergenic |
| GAGGAAGTGGGACCTGGAGA+AGG | 0.539535 | 5_1:+67450024 | None:intergenic |
| AATGGCTTCAAGATCTTCCT+GGG | 0.547393 | 5_1:+67450197 | None:intergenic |
| TTTCATATCCATTAAAGGTG+TGG | 0.552455 | 5_1:-67448149 | Msa0745640:CDS |
| ACGTTTGGTAGTGATGGCGG+TGG | 0.565650 | 5_1:+67450143 | None:intergenic |
| GAGATGATGCAAATTCCAAT+CGG | 0.569168 | 5_1:-67449500 | Msa0745640:CDS |
| CAGCAGGACATTTAATGATG+TGG | 0.569177 | 5_1:-67449570 | Msa0745640:CDS |
| ACTTCTACAGGTGTTCCACC+CGG | 0.569270 | 5_1:-67448459 | Msa0745640:intron |
| GACAAAAGTAGTGAAGTTGA+TGG | 0.571140 | 5_1:-67445765 | Msa0745640:CDS |
| TGGAGACCCACCTTCAAAAG+AGG | 0.572553 | 5_1:-67449464 | Msa0745640:intron |
| CGAATGCGAGCCTTTATCCC+AGG | 0.575805 | 5_1:-67450214 | Msa0745640:CDS |
| CCAAGAAGCAAAAGCATCTG+TGG | 0.579851 | 5_1:+67446516 | None:intergenic |
| TATCACGCTAATCAAAAGCT+AGG | 0.580739 | 5_1:-67448115 | Msa0745640:CDS |
| AGGAGGAGCTTGGTTTCGAG+CGG | 0.580987 | 5_1:-67450254 | Msa0745640:CDS |
| GAAGGGACGTTTGGTAGTGA+TGG | 0.582694 | 5_1:+67450137 | None:intergenic |
| CACTACACAGACATGAGATA+CGG | 0.589449 | 5_1:+67445726 | None:intergenic |
| GAAGGTGAGAAAGAGAGAGA+AGG | 0.591518 | 5_1:+67450042 | None:intergenic |
| GTAAAAGCTGTAGATTTCGA+GGG | 0.592056 | 5_1:+67448364 | None:intergenic |
| TGAAGAGCGATGAGCGATGT+GGG | 0.592673 | 5_1:+67450072 | None:intergenic |
| AGGTGGAGGTCCGAATAAGT+GGG | 0.596759 | 5_1:-67448095 | Msa0745640:CDS |
| ATGAGATACGGTCATTGTTG+CGG | 0.601141 | 5_1:+67445738 | None:intergenic |
| GCTAATCAAAAGCTAGGTGG+AGG | 0.615154 | 5_1:-67448109 | Msa0745640:CDS |
| CTTCTACAGGTGTTCCACCC+GGG | 0.615423 | 5_1:-67448458 | Msa0745640:intron |
| TTGAAGAGCGATGAGCGATG+TGG | 0.628089 | 5_1:+67450071 | None:intergenic |
| TGAGCGATGTGGGTAAGCGA+CGG | 0.634153 | 5_1:+67450082 | None:intergenic |
| GGGACGTTTGGTAGTGATGG+CGG | 0.643409 | 5_1:+67450140 | None:intergenic |
| TGATATTTACAAGGTTGGAG+CGG | 0.649599 | 5_1:-67448209 | Msa0745640:intron |
| CACGCTAATCAAAAGCTAGG+TGG | 0.649833 | 5_1:-67448112 | Msa0745640:CDS |
| AATAGAAACCTTCAAAACTG+AGG | 0.653917 | 5_1:+67448332 | None:intergenic |
| ATATTTACAAGGTTGGAGCG+GGG | 0.669237 | 5_1:-67448207 | Msa0745640:intron |
| AGCCCAGCAAAATAAGAATG+GGG | 0.678211 | 5_1:-67446585 | Msa0745640:CDS |
| GCGATGTGGGTAAGCGACGG+CGG | 0.679689 | 5_1:+67450085 | None:intergenic |
| GGTGGAGGTCCGAATAAGTG+GGG | 0.701955 | 5_1:-67448094 | Msa0745640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTATATTATTATGAC+AGG | - | chr5_1:67448132-67448151 | Msa0745640:CDS | 10.0% |
| !!! | ATTTTTATATTATTATGACA+GGG | - | chr5_1:67448133-67448152 | Msa0745640:CDS | 10.0% |
| !! | ATCAATTAAATTAAAAATAC+CGG | + | chr5_1:67450291-67450310 | None:intergenic | 10.0% |
| !!! | TATTAAAGTATTGTAGTTTT+AGG | + | chr5_1:67447304-67447323 | None:intergenic | 15.0% |
| !! | ATATTACTTATTATAATTGC+AGG | + | chr5_1:67448335-67448354 | None:intergenic | 15.0% |
| !!! | ATATAATTTTTAGACATCAT+CGG | - | chr5_1:67448542-67448561 | Msa0745640:intron | 15.0% |
| !! | AGATAACAATTAAAAGATTT+AGG | - | chr5_1:67448673-67448692 | Msa0745640:intron | 15.0% |
| !! | GATAACAATTAAAAGATTTA+GGG | - | chr5_1:67448674-67448693 | Msa0745640:intron | 15.0% |
| !!! | TGAAAATTCTAAAACTTATT+TGG | - | chr5_1:67448743-67448762 | Msa0745640:intron | 15.0% |
| !! | ATTGATTGAATTTACTATTT+AGG | + | chr5_1:67449934-67449953 | None:intergenic | 15.0% |
| !! | AGTAAAGTAATCAATATAGT+GGG | + | chr5_1:67445870-67445889 | None:intergenic | 20.0% |
| !! | AAGTAAAGTAATCAATATAG+TGG | + | chr5_1:67445871-67445890 | None:intergenic | 20.0% |
| !!! | ATTTCATCAATATTTCCTTT+TGG | - | chr5_1:67446173-67446192 | Msa0745640:intron | 20.0% |
| !! | AAGTTTATTAGAAAACCAAA+AGG | + | chr5_1:67446191-67446210 | None:intergenic | 20.0% |
| !!! | AGAAAATTCGATGTTTTTAT+TGG | - | chr5_1:67446665-67446684 | Msa0745640:intron | 20.0% |
| !!! | AAAAAAGTAATTTGAAGTTG+TGG | + | chr5_1:67447337-67447356 | None:intergenic | 20.0% |
| !! | TATGATGTTTGATATTTACA+AGG | - | chr5_1:67447642-67447661 | Msa0745640:intron | 20.0% |
| !! | GATTATTTCATATCCATTAA+AGG | - | chr5_1:67447706-67447725 | Msa0745640:intron | 20.0% |
| !! | TTTAAAAAACAGAATCAAAC+AGG | + | chr5_1:67448700-67448719 | None:intergenic | 20.0% |
| !!! | ATGTTTTTAGTTTTGGAAAT+TGG | + | chr5_1:67448870-67448889 | None:intergenic | 20.0% |
| !! | AATTTCCAAAACTAAAAACA+TGG | - | chr5_1:67448869-67448888 | Msa0745640:intron | 20.0% |
| !!! | ATGTGGTATATTTTCATTAA+TGG | - | chr5_1:67448894-67448913 | Msa0745640:intron | 20.0% |
| !!! | TTTTAAATGTGTTGTATCTT+AGG | + | chr5_1:67449816-67449835 | None:intergenic | 20.0% |
| ! | TAAAGTAATCAATATAGTGG+GGG | + | chr5_1:67445868-67445887 | None:intergenic | 25.0% |
| ! | GTAAAGTAATCAATATAGTG+GGG | + | chr5_1:67445869-67445888 | None:intergenic | 25.0% |
| ! | ATCTCAGTGTTAACTTATAT+TGG | - | chr5_1:67445960-67445979 | Msa0745640:intron | 25.0% |
| !!! | TATTGTTTTACTGGCTTAAT+TGG | - | chr5_1:67446033-67446052 | Msa0745640:intron | 25.0% |
| !! | AATCTCATAATGGTTCTATT+TGG | - | chr5_1:67446094-67446113 | Msa0745640:intron | 25.0% |
| !! | TATTTTGTAGAGAAAGAGAT+AGG | + | chr5_1:67446140-67446159 | None:intergenic | 25.0% |
| !!! | ATGTCTTTTTTATTGTTGCA+AGG | - | chr5_1:67446216-67446235 | Msa0745640:intron | 25.0% |
| !!! | TCTTTTCTTCAATGCTTTTT+AGG | + | chr5_1:67446335-67446354 | None:intergenic | 25.0% |
| !! | TTGCCAATATTGTTACTTAA+AGG | + | chr5_1:67446503-67446522 | None:intergenic | 25.0% |
| ! | TTTGGTATTTGTATCTGTTT+GGG | - | chr5_1:67446598-67446617 | Msa0745640:intron | 25.0% |
| !! | AAACATCGAATTTTCTTTAC+TGG | + | chr5_1:67446661-67446680 | None:intergenic | 25.0% |
| !! | TTTTCTTCTAGTCAATTGTT+TGG | - | chr5_1:67446768-67446787 | Msa0745640:intron | 25.0% |
| ! | GGTTTCTATTTACTTTAAAC+TGG | - | chr5_1:67447541-67447560 | Msa0745640:intron | 25.0% |
| ! | ATGTTTGATATTTACAAGGT+TGG | - | chr5_1:67447646-67447665 | Msa0745640:intron | 25.0% |
| !!! | CTGTTTTGATAGAAGTTTTT+CGG | + | chr5_1:67447806-67447825 | None:intergenic | 25.0% |
| ! | TACCAGATATAACATAAGAA+TGG | + | chr5_1:67448000-67448019 | None:intergenic | 25.0% |
| ! | AAAATAAATTCTTCCCCAAA+AGG | + | chr5_1:67448118-67448137 | None:intergenic | 25.0% |
| ! | TAAACTATACATGTAATGTC+AGG | + | chr5_1:67448196-67448215 | None:intergenic | 25.0% |
| !!! | ACTAGCACATTTTTTTAAAG+CGG | + | chr5_1:67448268-67448287 | None:intergenic | 25.0% |
| !! | GCAAAACATAAAACAGTTTT+GGG | + | chr5_1:67448793-67448812 | None:intergenic | 25.0% |
| !! | AGCAAAACATAAAACAGTTT+TGG | + | chr5_1:67448794-67448813 | None:intergenic | 25.0% |
| !!! | CATTTCCATGTTTTTAGTTT+TGG | + | chr5_1:67448877-67448896 | None:intergenic | 25.0% |
| ! | AAACTAAAAACATGGAAATG+TGG | - | chr5_1:67448877-67448896 | Msa0745640:intron | 25.0% |
| !!! | ATGGCATTTTAGTAAATAAG+TGG | - | chr5_1:67448913-67448932 | Msa0745640:intron | 25.0% |
| ! | AAGAAATAAGATTATCAAGC+AGG | - | chr5_1:67448965-67448984 | Msa0745640:intron | 25.0% |
| ! | AAATAAAAAACGGTGGAAAA+TGG | + | chr5_1:67449130-67449149 | None:intergenic | 25.0% |
| ! | AGGCCAAAGAAAATAAAAAA+CGG | + | chr5_1:67449140-67449159 | None:intergenic | 25.0% |
| ! | TAAAAGTTAATCTAGTTGCA+GGG | - | chr5_1:67449490-67449509 | Msa0745640:CDS | 25.0% |
| ! | TAGAAACTTAAGTATGAGAT+AGG | - | chr5_1:67449520-67449539 | Msa0745640:CDS | 25.0% |
| !!! | GTGCTTTGTTATTGTTTTAC+TGG | - | chr5_1:67446024-67446043 | Msa0745640:intron | 30.0% |
| !! | TGGAAACAGATGATTAGTTT+AGG | - | chr5_1:67446053-67446072 | Msa0745640:intron | 30.0% |
| ATAGAACCATTATGAGATTC+AGG | + | chr5_1:67446093-67446112 | None:intergenic | 30.0% | |
| AAAGAGATAGGATAAGTCTT+CGG | + | chr5_1:67446128-67446147 | None:intergenic | 30.0% | |
| ! | TTACCTGTAATGAAGTTTTG+TGG | - | chr5_1:67446255-67446274 | Msa0745640:intron | 30.0% |
| !! | TACCTGTAATGAAGTTTTGT+GGG | - | chr5_1:67446256-67446275 | Msa0745640:intron | 30.0% |
| GTAATAGAGTCAATACAACT+AGG | + | chr5_1:67446472-67446491 | None:intergenic | 30.0% | |
| ! | CCAATATTGTTACTTAAAGG+CGG | + | chr5_1:67446500-67446519 | None:intergenic | 30.0% |
| !!! | TTGATCAACTAGTTTTGGTT+TGG | - | chr5_1:67446580-67446599 | Msa0745640:CDS | 30.0% |
| GTTTGGTATTTGTATCTGTT+TGG | - | chr5_1:67446597-67446616 | Msa0745640:intron | 30.0% | |
| TGAAAAGATAAGAACATAGG+TGG | + | chr5_1:67446860-67446879 | None:intergenic | 30.0% | |
| TGCTGAAAAGATAAGAACAT+AGG | + | chr5_1:67446863-67446882 | None:intergenic | 30.0% | |
| !!! | GAAAGTTTTGGAAAAAAGGA+AGG | - | chr5_1:67446951-67446970 | Msa0745640:intron | 30.0% |
| CAAGTGGAAGAAATAACATT+GGG | - | chr5_1:67446976-67446995 | Msa0745640:intron | 30.0% | |
| GGGAACTAAAAAGTTGTATT+GGG | - | chr5_1:67447057-67447076 | Msa0745640:intron | 30.0% | |
| GGAACTAAAAAGTTGTATTG+GGG | - | chr5_1:67447058-67447077 | Msa0745640:intron | 30.0% | |
| GAACTAAAAAGTTGTATTGG+GGG | - | chr5_1:67447059-67447078 | Msa0745640:intron | 30.0% | |
| !!! | TGTAGTTTTAGGCTTTGTTT+GGG | + | chr5_1:67447293-67447312 | None:intergenic | 30.0% |
| !!! | TTGTAGTTTTAGGCTTTGTT+TGG | + | chr5_1:67447294-67447313 | None:intergenic | 30.0% |
| GTATTGTATGAAACTTCTAC+AGG | - | chr5_1:67447389-67447408 | Msa0745640:intron | 30.0% | |
| GTTCTTCATCTAATTCATTC+TGG | - | chr5_1:67447470-67447489 | Msa0745640:intron | 30.0% | |
| AATAGAAACCTTCAAAACTG+AGG | + | chr5_1:67447531-67447550 | None:intergenic | 30.0% | |
| ! | TTGTTTTCCTTTCTATCTGT+AGG | - | chr5_1:67447580-67447599 | Msa0745640:intron | 30.0% |
| ATTAGTTCCTACAGATAGAA+AGG | + | chr5_1:67447590-67447609 | None:intergenic | 30.0% | |
| TTTCATATCCATTAAAGGTG+TGG | - | chr5_1:67447711-67447730 | Msa0745640:intron | 30.0% | |
| TTTGATTAGCGTGATAAGAA+AGG | + | chr5_1:67447741-67447760 | None:intergenic | 30.0% | |
| CGAAAAACTTCTATCAAAAC+AGG | - | chr5_1:67447804-67447823 | Msa0745640:intron | 30.0% | |
| CATATTTCTTAAAAACCGAC+TGG | - | chr5_1:67447840-67447859 | Msa0745640:intron | 30.0% | |
| ! | ATCAGGTGTTTGAAGAATTT+TGG | + | chr5_1:67447892-67447911 | None:intergenic | 30.0% |
| AAAATTCTTCAAACACCTGA+TGG | - | chr5_1:67447891-67447910 | Msa0745640:intron | 30.0% | |
| CACCATTCTTATGTTATATC+TGG | - | chr5_1:67447995-67448014 | Msa0745640:intron | 30.0% | |
| ! | GTTTCCTTTGAAAGTTTCTT+CGG | - | chr5_1:67448020-67448039 | Msa0745640:intron | 30.0% |
| ! | TCAATGCTTTAACTACCTTT+TGG | - | chr5_1:67448100-67448119 | Msa0745640:CDS | 30.0% |
| ! | CAATGCTTTAACTACCTTTT+GGG | - | chr5_1:67448101-67448120 | Msa0745640:CDS | 30.0% |
| ! | AATGCTTTAACTACCTTTTG+GGG | - | chr5_1:67448102-67448121 | Msa0745640:CDS | 30.0% |
| !!! | TTTTTTTAAAGCGGATAGAG+AGG | + | chr5_1:67448259-67448278 | None:intergenic | 30.0% |
| ATTTCCAATTACTGAGTAGT+AGG | - | chr5_1:67448370-67448389 | Msa0745640:CDS | 30.0% | |
| TTTACCTACTACTCAGTAAT+TGG | + | chr5_1:67448377-67448396 | None:intergenic | 30.0% | |
| ! | ATGCTGATTAAGTTCTTCAA+AGG | - | chr5_1:67448498-67448517 | Msa0745640:intron | 30.0% |
| ! | TGCTGATTAAGTTCTTCAAA+GGG | - | chr5_1:67448499-67448518 | Msa0745640:intron | 30.0% |
| AACTGAAAACACAATCAAAC+AGG | - | chr5_1:67449057-67449076 | Msa0745640:intron | 30.0% | |
| GGAAAATGGATACTAAAGAA+AGG | + | chr5_1:67449116-67449135 | None:intergenic | 30.0% | |
| CCAAAGAAAATAAAAAACGG+TGG | + | chr5_1:67449137-67449156 | None:intergenic | 30.0% | |
| !!! | CCACCGTTTTTTATTTTCTT+TGG | - | chr5_1:67449134-67449153 | Msa0745640:intron | 30.0% |
| !!! | TTTTATTTTCTTTGGCCTTG+CGG | - | chr5_1:67449142-67449161 | Msa0745640:intron | 30.0% |
| GCTGCAAAAATAAATAAGCT+TGG | + | chr5_1:67449249-67449268 | None:intergenic | 30.0% | |
| CAAAATAAGAATGGGGAATT+GGG | - | chr5_1:67449282-67449301 | Msa0745640:intron | 30.0% | |
| GGTAATAAGGAATTCTTTGA+TGG | - | chr5_1:67449378-67449397 | Msa0745640:intron | 30.0% | |
| TGTCATGATTTGATAGAGTT+TGG | - | chr5_1:67449426-67449445 | Msa0745640:intron | 30.0% | |
| CTAAAAGTTAATCTAGTTGC+AGG | - | chr5_1:67449489-67449508 | Msa0745640:CDS | 30.0% | |
| AAAAGTTAATCTAGTTGCAG+GGG | - | chr5_1:67449491-67449510 | Msa0745640:CDS | 30.0% | |
| GACAAATAGATTAAGAGAGT+TGG | + | chr5_1:67449884-67449903 | None:intergenic | 30.0% | |
| ! | TTTACTATTTAGGACTCGTA+CGG | + | chr5_1:67449924-67449943 | None:intergenic | 30.0% |
| ACAAGTTTGAAAACAAGATG+AGG | + | chr5_1:67449974-67449993 | None:intergenic | 30.0% | |
| ! | TCTGCAAAAGTATACAAGAA+CGG | + | chr5_1:67450040-67450059 | None:intergenic | 30.0% |
| !! | ATCAACTTCACTACTTTTGT+CGG | + | chr5_1:67450096-67450115 | None:intergenic | 30.0% |
| TAAAAATACCGGCCATAAAA+GGG | + | chr5_1:67450280-67450299 | None:intergenic | 30.0% | |
| TTAAAAATACCGGCCATAAA+AGG | + | chr5_1:67450281-67450300 | None:intergenic | 30.0% | |
| !! | AACATTTTGATGGATCGTTC+AGG | - | chr5_1:67445569-67445588 | Msa0745640:three_prime_UTR | 35.0% |
| ! | TAATCAATATAGTGGGGGAA+AGG | + | chr5_1:67445863-67445882 | None:intergenic | 35.0% |
| AGTTAACACTGAGATTCACT+AGG | + | chr5_1:67445955-67445974 | None:intergenic | 35.0% | |
| ! | TATGAGATTCAGGTTCTGTT+TGG | + | chr5_1:67446083-67446102 | None:intergenic | 35.0% |
| ACAGAACCTGAATCTCATAA+TGG | - | chr5_1:67446084-67446103 | Msa0745640:intron | 35.0% | |
| ! | CTCATAATGGTTCTATTTGG+TGG | - | chr5_1:67446097-67446116 | Msa0745640:intron | 35.0% |
| AAGAGATAGGATAAGTCTTC+GGG | + | chr5_1:67446127-67446146 | None:intergenic | 35.0% | |
| CAGGTAACCTCAACTTTAAA+TGG | + | chr5_1:67446242-67446261 | None:intergenic | 35.0% | |
| TTCCCACAAAACTTCATTAC+AGG | + | chr5_1:67446261-67446280 | None:intergenic | 35.0% | |
| GAGATGATGCAAATTCCAAT+CGG | - | chr5_1:67446360-67446379 | Msa0745640:intron | 35.0% | |
| ! | TCTTGTTATGTTCAAGTAGC+TGG | - | chr5_1:67446430-67446449 | Msa0745640:intron | 35.0% |
| TATGTTCAAGTAGCTGGTTA+TGG | - | chr5_1:67446436-67446455 | Msa0745640:intron | 35.0% | |
| CCGCCTTTAAGTAACAATAT+TGG | - | chr5_1:67446497-67446516 | Msa0745640:intron | 35.0% | |
| !! | GGAAGTTGATCAACTAGTTT+TGG | - | chr5_1:67446575-67446594 | Msa0745640:CDS | 35.0% |
| !! | TATCAACCTAGTTGTTTCTC+TGG | + | chr5_1:67446632-67446651 | None:intergenic | 35.0% |
| !! | AGAGAAACAACTAGGTTGAT+AGG | - | chr5_1:67446631-67446650 | Msa0745640:intron | 35.0% |
| ! | TTATTGGTTGAAGAACCTCA+AGG | - | chr5_1:67446681-67446700 | Msa0745640:intron | 35.0% |
| TATACTGCTATTCCCATGAA+AGG | + | chr5_1:67446717-67446736 | None:intergenic | 35.0% | |
| AGCACTTGTAAGTTGTAAGT+GGG | + | chr5_1:67446741-67446760 | None:intergenic | 35.0% | |
| AAGCACTTGTAAGTTGTAAG+TGG | + | chr5_1:67446742-67446761 | None:intergenic | 35.0% | |
| !! | CAATTGTTTGGCTCTTTACT+CGG | - | chr5_1:67446780-67446799 | Msa0745640:intron | 35.0% |
| AGTTGCAACAAAGCTATTAC+AGG | + | chr5_1:67446830-67446849 | None:intergenic | 35.0% | |
| ! | TTGTTCCTTTTGTGACTGTA+AGG | - | chr5_1:67446896-67446915 | Msa0745640:intron | 35.0% |
| !!! | TAAGGCTTTGTTTGCGATTT+TGG | - | chr5_1:67446914-67446933 | Msa0745640:intron | 35.0% |
| !!! | AGGGGAAAGTTTTGGAAAAA+AGG | - | chr5_1:67446947-67446966 | Msa0745640:intron | 35.0% |
| GCAAGTGGAAGAAATAACAT+TGG | - | chr5_1:67446975-67446994 | Msa0745640:intron | 35.0% | |
| TGGAAGAAATAACATTGGGA+GGG | - | chr5_1:67446980-67446999 | Msa0745640:intron | 35.0% | |
| ATACAAAACCCTCCTCATAT+AGG | - | chr5_1:67447035-67447054 | Msa0745640:intron | 35.0% | |
| TACAAAACCCTCCTCATATA+GGG | - | chr5_1:67447036-67447055 | Msa0745640:intron | 35.0% | |
| !!! | CTTTTTAGTTCCCCTATATG+AGG | + | chr5_1:67447050-67447069 | None:intergenic | 35.0% |
| GGGGAACTAAAAAGTTGTAT+TGG | - | chr5_1:67447056-67447075 | Msa0745640:intron | 35.0% | |
| TAAAAAGTTGTATTGGGGGA+GGG | - | chr5_1:67447063-67447082 | Msa0745640:intron | 35.0% | |
| GTGGAAAATATAGAGGGAAA+TGG | + | chr5_1:67447231-67447250 | None:intergenic | 35.0% | |
| GTAAAAGCTGTAGATTTCGA+GGG | + | chr5_1:67447499-67447518 | None:intergenic | 35.0% | |
| AGTAAAAGCTGTAGATTTCG+AGG | + | chr5_1:67447500-67447519 | None:intergenic | 35.0% | |
| !! | TGAAGATTCCTCAGTTTTGA+AGG | - | chr5_1:67447520-67447539 | Msa0745640:intron | 35.0% |
| TGATATTTACAAGGTTGGAG+CGG | - | chr5_1:67447651-67447670 | Msa0745640:intron | 35.0% | |
| TATCACGCTAATCAAAAGCT+AGG | - | chr5_1:67447745-67447764 | Msa0745640:intron | 35.0% | |
| AAAAGTTTCTTTGTGCCATC+AGG | + | chr5_1:67447909-67447928 | None:intergenic | 35.0% | |
| ! | TTTTTATGCCCTTCCAAAAC+TGG | - | chr5_1:67447926-67447945 | Msa0745640:intron | 35.0% |
| ATAACATAAGAATGGTGAGC+AGG | + | chr5_1:67447992-67448011 | None:intergenic | 35.0% | |
| ! | TTTTCCTTATCTCTGGATAC+AGG | + | chr5_1:67448046-67448065 | None:intergenic | 35.0% |
| GTATCCAGAGATAAGGAAAA+TGG | - | chr5_1:67448046-67448065 | Msa0745640:intron | 35.0% | |
| AACATTCCATTCGTTTAGTG+GGG | + | chr5_1:67448081-67448100 | None:intergenic | 35.0% | |
| GAACATTCCATTCGTTTAGT+GGG | + | chr5_1:67448082-67448101 | None:intergenic | 35.0% | |
| TGAACATTCCATTCGTTTAG+TGG | + | chr5_1:67448083-67448102 | None:intergenic | 35.0% | |
| ACTTAATCAGCATTGTGCAA+GGG | + | chr5_1:67448491-67448510 | None:intergenic | 35.0% | |
| AACTTAATCAGCATTGTGCA+AGG | + | chr5_1:67448492-67448511 | None:intergenic | 35.0% | |
| ATGACTAGTGGAGAAGAAAA+TGG | + | chr5_1:67448626-67448645 | None:intergenic | 35.0% | |
| ! | AGAACTGCTGAATAGTGTTT+TGG | - | chr5_1:67448834-67448853 | Msa0745640:intron | 35.0% |
| AAGCCCAGCAAAATAAGAAT+GGG | - | chr5_1:67449274-67449293 | Msa0745640:intron | 35.0% | |
| !!! | TTCCCCATTCTTATTTTGCT+GGG | + | chr5_1:67449280-67449299 | None:intergenic | 35.0% |
| !!! | ATTCCCCATTCTTATTTTGC+TGG | + | chr5_1:67449281-67449300 | None:intergenic | 35.0% |
| GCAAAATAAGAATGGGGAAT+TGG | - | chr5_1:67449281-67449300 | Msa0745640:intron | 35.0% | |
| AGTTGCTCCTTTGACAAATA+AGG | + | chr5_1:67449313-67449332 | None:intergenic | 35.0% | |
| GGTTTCTCTATCAGGTAATA+AGG | - | chr5_1:67449365-67449384 | Msa0745640:intron | 35.0% | |
| TTTGAGTGATTAAGAGATGG+AGG | + | chr5_1:67449757-67449776 | None:intergenic | 35.0% | |
| GTGTTTGAGTGATTAAGAGA+TGG | + | chr5_1:67449760-67449779 | None:intergenic | 35.0% | |
| TAACACACGATACTATACAG+TGG | - | chr5_1:67449786-67449805 | Msa0745640:intron | 35.0% | |
| TACGGGGACATGATAAAATA+AGG | + | chr5_1:67449906-67449925 | None:intergenic | 35.0% | |
| ! | TTACTATTTAGGACTCGTAC+GGG | + | chr5_1:67449923-67449942 | None:intergenic | 35.0% |
| GTTTGAAAACAAGATGAGGT+TGG | + | chr5_1:67449970-67449989 | None:intergenic | 35.0% | |
| TACAAGAACGGTTGTATTAC+TGG | + | chr5_1:67450028-67450047 | None:intergenic | 35.0% | |
| GACAAAAGTAGTGAAGTTGA+TGG | - | chr5_1:67450095-67450114 | Msa0745640:CDS | 35.0% | |
| TCCAGTAGACTTGATTTCTT+GGG | + | chr5_1:67450248-67450267 | None:intergenic | 35.0% | |
| ATCCAGTAGACTTGATTTCT+TGG | + | chr5_1:67450249-67450268 | None:intergenic | 35.0% | |
| TCAAGATCTTCCTGGGATAA+AGG | + | chr5_1:67445659-67445678 | None:intergenic | 40.0% | |
| AATGGCTTCAAGATCTTCCT+GGG | + | chr5_1:67445666-67445685 | None:intergenic | 40.0% | |
| ACTGGAAATCAACAGAATGC+AGG | + | chr5_1:67445927-67445946 | None:intergenic | 40.0% | |
| !! | TGCATTCTGTTGATTTCCAG+TGG | - | chr5_1:67445926-67445945 | Msa0745640:intron | 40.0% |
| ! | TGCAAGGCCATTTAAAGTTG+AGG | - | chr5_1:67446232-67446251 | Msa0745640:intron | 40.0% |
| GTGGGAAAATTATGTACAGC+AGG | - | chr5_1:67446274-67446293 | Msa0745640:intron | 40.0% | |
| CAGCAGGACATTTAATGATG+TGG | - | chr5_1:67446290-67446309 | Msa0745640:intron | 40.0% | |
| CACTCAATGTCAAATCCGAT+TGG | + | chr5_1:67446378-67446397 | None:intergenic | 40.0% | |
| CAATCGGATTTGACATTGAG+TGG | - | chr5_1:67446376-67446395 | Msa0745640:intron | 40.0% | |
| !! | AACCAACCTCTTTTGAAGGT+GGG | + | chr5_1:67446405-67446424 | None:intergenic | 40.0% |
| ! | ACCTTCAAAAGAGGTTGGTT+CGG | - | chr5_1:67446405-67446424 | Msa0745640:intron | 40.0% |
| TAGTATGCCTACAAGAGTGA+AGG | - | chr5_1:67446554-67446573 | Msa0745640:CDS | 40.0% | |
| TCAACTTCCTTCACTCTTGT+AGG | + | chr5_1:67446564-67446583 | None:intergenic | 40.0% | |
| ! | TTTGTATCTGTTTGGGACCA+CGG | - | chr5_1:67446605-67446624 | Msa0745640:intron | 40.0% |
| ! | AAAGGACGTTTTCTTCCTTG+AGG | + | chr5_1:67446699-67446718 | None:intergenic | 40.0% |
| AGGAAGAAAACGTCCTTTCA+TGG | - | chr5_1:67446701-67446720 | Msa0745640:intron | 40.0% | |
| GGAAGAAAACGTCCTTTCAT+GGG | - | chr5_1:67446702-67446721 | Msa0745640:intron | 40.0% | |
| TTACTCGGTCACATAGCTTA+TGG | - | chr5_1:67446795-67446814 | Msa0745640:intron | 40.0% | |
| CAAAGCCTTACAGTCACAAA+AGG | + | chr5_1:67446904-67446923 | None:intergenic | 40.0% | |
| !!! | GCTTTGTTTGCGATTTTGGA+GGG | - | chr5_1:67446918-67446937 | Msa0745640:intron | 40.0% |
| !! | CTTTGTTTGCGATTTTGGAG+GGG | - | chr5_1:67446919-67446938 | Msa0745640:intron | 40.0% |
| GTGGAAGAAATAACATTGGG+AGG | - | chr5_1:67446979-67446998 | Msa0745640:intron | 40.0% | |
| GGAAGAAATAACATTGGGAG+GGG | - | chr5_1:67446981-67447000 | Msa0745640:intron | 40.0% | |
| ACAAAACCCTCCTCATATAG+GGG | - | chr5_1:67447037-67447056 | Msa0745640:intron | 40.0% | |
| TTAGTTCCCCTATATGAGGA+GGG | + | chr5_1:67447046-67447065 | None:intergenic | 40.0% | |
| ! | TTTAGTTCCCCTATATGAGG+AGG | + | chr5_1:67447047-67447066 | None:intergenic | 40.0% |
| CTAAAAAGTTGTATTGGGGG+AGG | - | chr5_1:67447062-67447081 | Msa0745640:intron | 40.0% | |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr5_1:67447286-67447305 | None:intergenic | 40.0% |
| GATATTTACAAGGTTGGAGC+GGG | - | chr5_1:67447652-67447671 | Msa0745640:intron | 40.0% | |
| ATATTTACAAGGTTGGAGCG+GGG | - | chr5_1:67447653-67447672 | Msa0745640:intron | 40.0% | |
| AAGGTCTTCCACACCTTTAA+TGG | + | chr5_1:67447722-67447741 | None:intergenic | 40.0% | |
| !!! | TTAACCAGCCAGTTTTGGAA+GGG | + | chr5_1:67447937-67447956 | None:intergenic | 40.0% |
| ! | TCATGTTAACCAGCCAGTTT+TGG | + | chr5_1:67447942-67447961 | None:intergenic | 40.0% |
| TAAGAATGGTGAGCAGGTTT+GGG | + | chr5_1:67447986-67448005 | None:intergenic | 40.0% | |
| ATAAGAATGGTGAGCAGGTT+TGG | + | chr5_1:67447987-67448006 | None:intergenic | 40.0% | |
| TTATGACAGGGAGTCTATGT+AGG | - | chr5_1:67448145-67448164 | Msa0745640:CDS | 40.0% | |
| ATAGAGAGGTAGGTCATATG+TGG | + | chr5_1:67448245-67448264 | None:intergenic | 40.0% | |
| ! | TTTAAAGCGGATAGAGAGGT+AGG | + | chr5_1:67448255-67448274 | None:intergenic | 40.0% |
| GCAACAATACAGATGACTAG+TGG | + | chr5_1:67448638-67448657 | None:intergenic | 40.0% | |
| AAACAATCAAGCAGACGCAT+GGG | + | chr5_1:67449092-67449111 | None:intergenic | 40.0% | |
| AAAACAATCAAGCAGACGCA+TGG | + | chr5_1:67449093-67449112 | None:intergenic | 40.0% | |
| GAAGCCCAGCAAAATAAGAA+TGG | - | chr5_1:67449273-67449292 | Msa0745640:intron | 40.0% | |
| AGCCCAGCAAAATAAGAATG+GGG | - | chr5_1:67449275-67449294 | Msa0745640:intron | 40.0% | |
| ! | GGAGACTCCTTATTTGTCAA+AGG | - | chr5_1:67449303-67449322 | Msa0745640:intron | 40.0% |
| TGCTTCTTGGTTTCTCTATC+AGG | - | chr5_1:67449357-67449376 | Msa0745640:intron | 40.0% | |
| TTAATCTAGTTGCAGGGGAT+TGG | - | chr5_1:67449496-67449515 | Msa0745640:CDS | 40.0% | |
| CATGGAGTGATGTACACTAA+TGG | + | chr5_1:67449648-67449667 | None:intergenic | 40.0% | |
| AGTGATTAAGAGATGGAGGA+TGG | + | chr5_1:67449753-67449772 | None:intergenic | 40.0% | |
| ! | TACTATTTAGGACTCGTACG+GGG | + | chr5_1:67449922-67449941 | None:intergenic | 40.0% |
| ATGAGATACGGTCATTGTTG+CGG | + | chr5_1:67450125-67450144 | None:intergenic | 40.0% | |
| CACTACACAGACATGAGATA+CGG | + | chr5_1:67450137-67450156 | None:intergenic | 40.0% | |
| TCCCAAGAAATCAAGTCTAC+TGG | - | chr5_1:67450244-67450263 | Msa0745640:CDS | 40.0% | |
| ! | GGATGATTCAGTCCCTTTTA+TGG | - | chr5_1:67450265-67450284 | Msa0745640:CDS | 40.0% |
| ATCGTTCAGGCGAAGGAAAA+AGG | - | chr5_1:67445582-67445601 | Msa0745640:three_prime_UTR | 45.0% | |
| TCGTTCAGGCGAAGGAAAAA+GGG | - | chr5_1:67445583-67445602 | Msa0745640:three_prime_UTR | 45.0% | |
| CAATGGCTTCAAGATCTTCC+TGG | + | chr5_1:67445667-67445686 | None:intergenic | 45.0% | |
| AGATTGAAGAGTGGCGTCAA+TGG | + | chr5_1:67445684-67445703 | None:intergenic | 45.0% | |
| GTGAGAAAGAGAGAGAAGGT+GGG | + | chr5_1:67445817-67445836 | None:intergenic | 45.0% | |
| GAAGGTGAGAAAGAGAGAGA+AGG | + | chr5_1:67445821-67445840 | None:intergenic | 45.0% | |
| ! | AATATAGTGGGGGAAAGGAG+AGG | + | chr5_1:67445858-67445877 | None:intergenic | 45.0% |
| TCAACAGAATGCAGGAACAG+TGG | + | chr5_1:67445919-67445938 | None:intergenic | 45.0% | |
| GAGATTCACTAGGAATCCAC+TGG | + | chr5_1:67445945-67445964 | None:intergenic | 45.0% | |
| !! | GAACCAACCTCTTTTGAAGG+TGG | + | chr5_1:67446406-67446425 | None:intergenic | 45.0% |
| ! | ACCGAACCAACCTCTTTTGA+AGG | + | chr5_1:67446409-67446428 | None:intergenic | 45.0% |
| !!! | GGCTTTGTTTGCGATTTTGG+AGG | - | chr5_1:67446917-67446936 | Msa0745640:intron | 45.0% |
| !! | TTTGCGATTTTGGAGGGGAA+GGG | - | chr5_1:67446924-67446943 | Msa0745640:intron | 45.0% |
| GGAAAAAAGGAAGGAGCAAG+TGG | - | chr5_1:67446960-67446979 | Msa0745640:intron | 45.0% | |
| AGAAATAACATTGGGAGGGG+AGG | - | chr5_1:67446984-67447003 | Msa0745640:intron | 45.0% | |
| GAAATAACATTGGGAGGGGA+GGG | - | chr5_1:67446985-67447004 | Msa0745640:intron | 45.0% | |
| TGGGGGGTGGAAAATATAGA+GGG | + | chr5_1:67447237-67447256 | None:intergenic | 45.0% | |
| TTGGGGGGTGGAAAATATAG+AGG | + | chr5_1:67447238-67447257 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr5_1:67447282-67447301 | None:intergenic | 45.0% |
| CACGCTAATCAAAAGCTAGG+TGG | - | chr5_1:67447748-67447767 | Msa0745640:intron | 45.0% | |
| GCTAATCAAAAGCTAGGTGG+AGG | - | chr5_1:67447751-67447770 | Msa0745640:intron | 45.0% | |
| GATGCAAGACCCCACTTATT+CGG | + | chr5_1:67447778-67447797 | None:intergenic | 45.0% | |
| AACCGACTGGATTGTGTACA+TGG | - | chr5_1:67447853-67447872 | Msa0745640:intron | 45.0% | |
| ACCGACTGGATTGTGTACAT+GGG | - | chr5_1:67447854-67447873 | Msa0745640:intron | 45.0% | |
| TCCCATGTACACAATCCAGT+CGG | + | chr5_1:67447858-67447877 | None:intergenic | 45.0% | |
| !!! | GTTAACCAGCCAGTTTTGGA+AGG | + | chr5_1:67447938-67447957 | None:intergenic | 45.0% |
| CAGGCCGAAGAAACTTTCAA+AGG | + | chr5_1:67448027-67448046 | None:intergenic | 45.0% | |
| ! | GCGTCCATTTTCCTTATCTC+TGG | + | chr5_1:67448053-67448072 | None:intergenic | 45.0% |
| ACAGGGAGTCTATGTAGGTT+TGG | - | chr5_1:67448150-67448169 | Msa0745640:CDS | 45.0% | |
| GTCATATGTGGCATTAGAGC+TGG | + | chr5_1:67448233-67448252 | None:intergenic | 45.0% | |
| TTGTGCAAGGGACAAAACTC+TGG | + | chr5_1:67448479-67448498 | None:intergenic | 45.0% | |
| AGCAGACGCATGGGAATTAA+GGG | + | chr5_1:67449083-67449102 | None:intergenic | 45.0% | |
| AAGCAGACGCATGGGAATTA+AGG | + | chr5_1:67449084-67449103 | None:intergenic | 45.0% | |
| TCAAATTTGTCCTCTCCGCA+AGG | + | chr5_1:67449160-67449179 | None:intergenic | 45.0% | |
| TGCGGAGAGGACAAATTTGA+AGG | - | chr5_1:67449160-67449179 | Msa0745640:intron | 45.0% | |
| !! | CCAAGAAGCAAAAGCATCTG+TGG | + | chr5_1:67449347-67449366 | None:intergenic | 45.0% |
| ! | CCACAGATGCTTTTGCTTCT+TGG | - | chr5_1:67449344-67449363 | Msa0745640:intron | 45.0% |
| GTACACTAATGGCAACAGAG+TGG | + | chr5_1:67449637-67449656 | None:intergenic | 45.0% | |
| !! | CGATGATGATGGAGAGTGTT+GGG | + | chr5_1:67449704-67449723 | None:intergenic | 45.0% |
| GATTAAGAGATGGAGGATGG+CGG | + | chr5_1:67449750-67449769 | None:intergenic | 45.0% | |
| ! | ACTTTTGTCGGCAACTTCCT+GGG | + | chr5_1:67450084-67450103 | None:intergenic | 45.0% |
| ! | TACTTTTGTCGGCAACTTCC+TGG | + | chr5_1:67450085-67450104 | None:intergenic | 45.0% |
| ! | GATTCAGTCCCTTTTATGGC+CGG | - | chr5_1:67450269-67450288 | Msa0745640:CDS | 45.0% |
| ! | TTGATGGATCGTTCAGGCGA+AGG | - | chr5_1:67445575-67445594 | Msa0745640:three_prime_UTR | 50.0% |
| TTCAGGCGAAGGAAAAAGGG+AGG | - | chr5_1:67445586-67445605 | Msa0745640:three_prime_UTR | 50.0% | |
| GGGGAGAGAAGATTGAAGAG+TGG | + | chr5_1:67445693-67445712 | None:intergenic | 50.0% | |
| !! | GAAGGGACGTTTGGTAGTGA+TGG | + | chr5_1:67445726-67445745 | None:intergenic | 50.0% |
| GTGAGAGATGAAGGGACGTT+TGG | + | chr5_1:67445735-67445754 | None:intergenic | 50.0% | |
| TGAAGAGCGATGAGCGATGT+GGG | + | chr5_1:67445791-67445810 | None:intergenic | 50.0% | |
| TTGAAGAGCGATGAGCGATG+TGG | + | chr5_1:67445792-67445811 | None:intergenic | 50.0% | |
| GGTGAGAAAGAGAGAGAAGG+TGG | + | chr5_1:67445818-67445837 | None:intergenic | 50.0% | |
| CTCTCTTTCTCACCTTCTCC+AGG | - | chr5_1:67445824-67445843 | Msa0745640:intron | 50.0% | |
| CAGAATGCAGGAACAGTGGA+GGG | + | chr5_1:67445915-67445934 | None:intergenic | 50.0% | |
| ACAGAATGCAGGAACAGTGG+AGG | + | chr5_1:67445916-67445935 | None:intergenic | 50.0% | |
| TGGAGACCCACCTTCAAAAG+AGG | - | chr5_1:67446396-67446415 | Msa0745640:intron | 50.0% | |
| GACCCACCTTCAAAAGAGGT+TGG | - | chr5_1:67446400-67446419 | Msa0745640:intron | 50.0% | |
| !! | CTAGTTGTTTCTCTGGTCCG+TGG | + | chr5_1:67446625-67446644 | None:intergenic | 50.0% |
| CACGGACCAGAGAAACAACT+AGG | - | chr5_1:67446623-67446642 | Msa0745640:intron | 50.0% | |
| !! | GTTTGCGATTTTGGAGGGGA+AGG | - | chr5_1:67446923-67446942 | Msa0745640:intron | 50.0% |
| ! | GTTGTATTGGGGGAGGGTTT+TGG | - | chr5_1:67447069-67447088 | Msa0745640:intron | 50.0% |
| !!! | TATTGGGGGAGGGTTTTGGA+GGG | - | chr5_1:67447073-67447092 | Msa0745640:intron | 50.0% |
| TTTGGGAGTTTGGAGGGAAG+GGG | + | chr5_1:67447276-67447295 | None:intergenic | 50.0% | |
| GTTTGGGAGTTTGGAGGGAA+GGG | + | chr5_1:67447277-67447296 | None:intergenic | 50.0% | |
| TGTTTGGGAGTTTGGAGGGA+AGG | + | chr5_1:67447278-67447297 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr5_1:67447283-67447302 | None:intergenic | 50.0% |
| ACTTCTACAGGTGTTCCACC+CGG | - | chr5_1:67447401-67447420 | Msa0745640:intron | 50.0% | |
| !!! | TGCATCACTGCTGTTTTCCC+GGG | + | chr5_1:67447422-67447441 | None:intergenic | 50.0% |
| !!! | CTGCATCACTGCTGTTTTCC+CGG | + | chr5_1:67447423-67447442 | None:intergenic | 50.0% |
| GATTGGCGGTGATGCTTCTA+AGG | - | chr5_1:67447675-67447694 | Msa0745640:intron | 50.0% | |
| TAGGTGGAGGTCCGAATAAG+TGG | - | chr5_1:67447764-67447783 | Msa0745640:intron | 50.0% | |
| AGGTGGAGGTCCGAATAAGT+GGG | - | chr5_1:67447765-67447784 | Msa0745640:intron | 50.0% | |
| TATGCCCTTCCAAAACTGGC+TGG | - | chr5_1:67447930-67447949 | Msa0745640:intron | 50.0% | |
| ! | GCAGGTTTGGGACATTGAAG+TGG | + | chr5_1:67447974-67447993 | None:intergenic | 50.0% |
| TCGGCCTGTATCCAGAGATA+AGG | - | chr5_1:67448039-67448058 | Msa0745640:intron | 50.0% | |
| CTGTCTCCCCACTAAACGAA+TGG | - | chr5_1:67448072-67448091 | Msa0745640:CDS | 50.0% | |
| !!! | TTTTCTTTGGCCTTGCGGAG+AGG | - | chr5_1:67449147-67449166 | Msa0745640:intron | 50.0% |
| !! | GTAGAGGGCATCAAGTGCAA+GGG | + | chr5_1:67449582-67449601 | None:intergenic | 50.0% |
| TGGGCAGCAGTAATGGTAGA+GGG | + | chr5_1:67449597-67449616 | None:intergenic | 50.0% | |
| ATGGGCAGCAGTAATGGTAG+AGG | + | chr5_1:67449598-67449617 | None:intergenic | 50.0% | |
| AGATGCATGGGCAGCAGTAA+TGG | + | chr5_1:67449604-67449623 | None:intergenic | 50.0% | |
| TAATGGCAACAGAGTGGCAG+TGG | + | chr5_1:67449631-67449650 | None:intergenic | 50.0% | |
| TGGTGAAAGGTGGTCAGTGA+CGG | + | chr5_1:67449675-67449694 | None:intergenic | 50.0% | |
| TGTTGGGTGGCAATGGTGAA+AGG | + | chr5_1:67449688-67449707 | None:intergenic | 50.0% | |
| !! | TGATGATGGAGAGTGTTGGG+TGG | + | chr5_1:67449701-67449720 | None:intergenic | 50.0% |
| !! | GCGATGATGATGGAGAGTGT+TGG | + | chr5_1:67449705-67449724 | None:intergenic | 50.0% |
| TAAAGATCTCCCAGATGCCC+AGG | - | chr5_1:67450064-67450083 | Msa0745640:CDS | 50.0% | |
| AGGCGAAGGAAAAAGGGAGG+AGG | - | chr5_1:67445589-67445608 | Msa0745640:three_prime_UTR | 55.0% | |
| GGAAAAAGGGAGGAGGAGCT+TGG | - | chr5_1:67445596-67445615 | Msa0745640:three_prime_UTR | 55.0% | |
| AGGAGGAGCTTGGTTTCGAG+CGG | - | chr5_1:67445606-67445625 | Msa0745640:three_prime_UTR | 55.0% | |
| CTCGCATTCGCACACGAATG+AGG | + | chr5_1:67445636-67445655 | None:intergenic | 55.0% | |
| CGAATGCGAGCCTTTATCCC+AGG | - | chr5_1:67445646-67445665 | Msa0745640:three_prime_UTR | 55.0% | |
| !! | TAGTGATGGCGGTGGGTTTG+GGG | + | chr5_1:67445712-67445731 | None:intergenic | 55.0% |
| !! | GTAGTGATGGCGGTGGGTTT+GGG | + | chr5_1:67445713-67445732 | None:intergenic | 55.0% |
| !! | CGTTTGGTAGTGATGGCGGT+GGG | + | chr5_1:67445719-67445738 | None:intergenic | 55.0% |
| !! | ACGTTTGGTAGTGATGGCGG+TGG | + | chr5_1:67445720-67445739 | None:intergenic | 55.0% |
| !! | GGGACGTTTGGTAGTGATGG+CGG | + | chr5_1:67445723-67445742 | None:intergenic | 55.0% |
| GGGGGAGAGTGAGAGATGAA+GGG | + | chr5_1:67445743-67445762 | None:intergenic | 55.0% | |
| AGGGGGAGAGTGAGAGATGA+AGG | + | chr5_1:67445744-67445763 | None:intergenic | 55.0% | |
| TGAGCGATGTGGGTAAGCGA+CGG | + | chr5_1:67445781-67445800 | None:intergenic | 55.0% | |
| AAAGGAGAGGAAGTGGGACC+TGG | + | chr5_1:67445845-67445864 | None:intergenic | 55.0% | |
| TGGGGGAAAGGAGAGGAAGT+GGG | + | chr5_1:67445851-67445870 | None:intergenic | 55.0% | |
| !! | CGATTTTGGAGGGGAAGGGA+GGG | - | chr5_1:67446928-67446947 | Msa0745640:intron | 55.0% |
| !! | GATTTTGGAGGGGAAGGGAG+GGG | - | chr5_1:67446929-67446948 | Msa0745640:intron | 55.0% |
| ! | GGGAAGGGAGGGGAAAGTTT+TGG | - | chr5_1:67446939-67446958 | Msa0745640:intron | 55.0% |
| !! | GTATTGGGGGAGGGTTTTGG+AGG | - | chr5_1:67447072-67447091 | Msa0745640:intron | 55.0% |
| !! | AAGGAAGGAAGGGCTTTGGG+GGG | + | chr5_1:67447253-67447272 | None:intergenic | 55.0% |
| ! | GAAGGAAGGAAGGGCTTTGG+GGG | + | chr5_1:67447254-67447273 | None:intergenic | 55.0% |
| GGAAGGAAGGAAGGGCTTTG+GGG | + | chr5_1:67447255-67447274 | None:intergenic | 55.0% | |
| GGGAAGGAAGGAAGGGCTTT+GGG | + | chr5_1:67447256-67447275 | None:intergenic | 55.0% | |
| AGGGAAGGGGAAGGAAGGAA+GGG | + | chr5_1:67447263-67447282 | None:intergenic | 55.0% | |
| TTTGGAGGGAAGGGGAAGGA+AGG | + | chr5_1:67447268-67447287 | None:intergenic | 55.0% | |
| CTTCTACAGGTGTTCCACCC+GGG | - | chr5_1:67447402-67447421 | Msa0745640:intron | 55.0% | |
| !!! | ATCACTGCTGTTTTCCCGGG+TGG | + | chr5_1:67447419-67447438 | None:intergenic | 55.0% |
| TACAAGGTTGGAGCGGGGAT+TGG | - | chr5_1:67447658-67447677 | Msa0745640:intron | 55.0% | |
| GGTGGAGGTCCGAATAAGTG+GGG | - | chr5_1:67447766-67447785 | Msa0745640:intron | 55.0% | |
| AAGTGCAAGGGTGGAAGGCA+GGG | + | chr5_1:67449570-67449589 | None:intergenic | 55.0% | |
| GCATCAAGTGCAAGGGTGGA+AGG | + | chr5_1:67449575-67449594 | None:intergenic | 55.0% | |
| !! | GGTAGAGGGCATCAAGTGCA+AGG | + | chr5_1:67449583-67449602 | None:intergenic | 55.0% |
| ! | GGCAGTGGTGGAAGATGCAT+GGG | + | chr5_1:67449616-67449635 | None:intergenic | 55.0% |
| ! | TGGCAGTGGTGGAAGATGCA+TGG | + | chr5_1:67449617-67449636 | None:intergenic | 55.0% |
| TGGGTGGCAATGGTGAAAGG+TGG | + | chr5_1:67449685-67449704 | None:intergenic | 55.0% | |
| !! | TGGAGAGTGTTGGGTGGCAA+TGG | + | chr5_1:67449695-67449714 | None:intergenic | 55.0% |
| CAGGGTGACAGCGATGATGA+TGG | + | chr5_1:67449715-67449734 | None:intergenic | 55.0% | |
| ! | TGGAGGATGGCGGTGATGAA+GGG | + | chr5_1:67449740-67449759 | None:intergenic | 55.0% |
| ! | ATGGAGGATGGCGGTGATGA+AGG | + | chr5_1:67449741-67449760 | None:intergenic | 55.0% |
| !! | GGTAGTGATGGCGGTGGGTT+TGG | + | chr5_1:67445714-67445733 | None:intergenic | 60.0% |
| GAGGAAGTGGGACCTGGAGA+AGG | + | chr5_1:67445839-67445858 | None:intergenic | 60.0% | |
| GTGGGGGAAAGGAGAGGAAG+TGG | + | chr5_1:67445852-67445871 | None:intergenic | 60.0% | |
| !! | GCGATTTTGGAGGGGAAGGG+AGG | - | chr5_1:67446927-67446946 | Msa0745640:intron | 60.0% |
| ACATTGGGAGGGGAGGGCTT+TGG | - | chr5_1:67446991-67447010 | Msa0745640:intron | 60.0% | |
| CATTGGGAGGGGAGGGCTTT+GGG | - | chr5_1:67446992-67447011 | Msa0745640:intron | 60.0% | |
| ATTGGGAGGGGAGGGCTTTG+GGG | - | chr5_1:67446993-67447012 | Msa0745640:intron | 60.0% | |
| GGGGAAGGAAGGAAGGGCTT+TGG | + | chr5_1:67447257-67447276 | None:intergenic | 60.0% | |
| GAGGGAAGGGGAAGGAAGGA+AGG | + | chr5_1:67447264-67447283 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGAAGGGGA+AGG | + | chr5_1:67447272-67447291 | None:intergenic | 60.0% | |
| AAGGTTGGAGCGGGGATTGG+CGG | - | chr5_1:67447661-67447680 | Msa0745640:intron | 60.0% | |
| AAGGCAGGGAAGGGAGGAAG+AGG | + | chr5_1:67449556-67449575 | None:intergenic | 60.0% | |
| CAAGGGTGGAAGGCAGGGAA+GGG | + | chr5_1:67449565-67449584 | None:intergenic | 60.0% | |
| CAAGTGCAAGGGTGGAAGGC+AGG | + | chr5_1:67449571-67449590 | None:intergenic | 60.0% | |
| !! | GAGGGCATCAAGTGCAAGGG+TGG | + | chr5_1:67449579-67449598 | None:intergenic | 60.0% |
| TGGCAACAGAGTGGCAGTGG+TGG | + | chr5_1:67449628-67449647 | None:intergenic | 60.0% | |
| GTGGTCAGTGACGGCAGTCA+TGG | + | chr5_1:67449666-67449685 | None:intergenic | 60.0% | |
| ! | TGGCGGTGATGAAGGGTGCA+GGG | + | chr5_1:67449733-67449752 | None:intergenic | 60.0% |
| ! | ATGGCGGTGATGAAGGGTGC+AGG | + | chr5_1:67449734-67449753 | None:intergenic | 60.0% |
| CGGCAACTTCCTGGGCATCT+GGG | + | chr5_1:67450076-67450095 | None:intergenic | 60.0% | |
| TCGGCAACTTCCTGGGCATC+TGG | + | chr5_1:67450077-67450096 | None:intergenic | 60.0% | |
| GCGATGTGGGTAAGCGACGG+CGG | + | chr5_1:67445778-67445797 | None:intergenic | 65.0% | |
| ! | TTGGGAGGGGAGGGCTTTGG+GGG | - | chr5_1:67446994-67447013 | Msa0745640:intron | 65.0% |
| !! | GAAGGAAGGGCTTTGGGGGG+TGG | + | chr5_1:67447250-67447269 | None:intergenic | 65.0% |
| GCAAGGGTGGAAGGCAGGGA+AGG | + | chr5_1:67449566-67449585 | None:intergenic | 65.0% | |
| GTAAGCGACGGCGGCTGCTG+CGG | + | chr5_1:67445769-67445788 | None:intergenic | 70.0% | |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | - | chr5_1:67446995-67447014 | Msa0745640:intron | 70.0% |
| GGGTGGAAGGCAGGGAAGGG+AGG | + | chr5_1:67449562-67449581 | None:intergenic | 70.0% | |
| !! | GGGAGGGGAGGGCTTTGGGG+GGG | - | chr5_1:67446996-67447015 | Msa0745640:intron | 75.0% |
| ! | ACGGCGGCTGCTGCGGCGAG+GGG | + | chr5_1:67445762-67445781 | None:intergenic | 80.0% |
| ! | GACGGCGGCTGCTGCGGCGA+GGG | + | chr5_1:67445763-67445782 | None:intergenic | 80.0% |
| ! | CGGCGGCTGCTGCGGCGAGG+GGG | + | chr5_1:67445761-67445780 | None:intergenic | 85.0% |
| ! | CGACGGCGGCTGCTGCGGCG+AGG | + | chr5_1:67445764-67445783 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 67445567 | 67450315 | 67445567 | ID=Msa0745640;Name=Msa0745640 |
| chr5_1 | mRNA | 67445567 | 67450315 | 67445567 | ID=Msa0745640-mRNA-1;Parent=Msa0745640;Name=Msa0745640-mRNA-1;_AED=0.30;_eAED=0.30;_QI=11|1|1|1|1|1|6|182|308 |
| chr5_1 | exon | 67445567 | 67445823 | 67445567 | ID=Msa0745640-mRNA-1:exon:20058;Parent=Msa0745640-mRNA-1 |
| chr5_1 | exon | 67446504 | 67446614 | 67446504 | ID=Msa0745640-mRNA-1:exon:20057;Parent=Msa0745640-mRNA-1 |
| chr5_1 | exon | 67448057 | 67448218 | 67448057 | ID=Msa0745640-mRNA-1:exon:20056;Parent=Msa0745640-mRNA-1 |
| chr5_1 | exon | 67448341 | 67448471 | 67448341 | ID=Msa0745640-mRNA-1:exon:20055;Parent=Msa0745640-mRNA-1 |
| chr5_1 | exon | 67449465 | 67449644 | 67449465 | ID=Msa0745640-mRNA-1:exon:20054;Parent=Msa0745640-mRNA-1 |
| chr5_1 | exon | 67450037 | 67450315 | 67450037 | ID=Msa0745640-mRNA-1:exon:20053;Parent=Msa0745640-mRNA-1 |
| chr5_1 | five_prime_UTR | 67450305 | 67450315 | 67450305 | ID=Msa0745640-mRNA-1:five_prime_utr;Parent=Msa0745640-mRNA-1 |
| chr5_1 | CDS | 67450037 | 67450304 | 67450037 | ID=Msa0745640-mRNA-1:cds;Parent=Msa0745640-mRNA-1 |
| chr5_1 | CDS | 67449465 | 67449644 | 67449465 | ID=Msa0745640-mRNA-1:cds;Parent=Msa0745640-mRNA-1 |
| chr5_1 | CDS | 67448341 | 67448471 | 67448341 | ID=Msa0745640-mRNA-1:cds;Parent=Msa0745640-mRNA-1 |
| chr5_1 | CDS | 67448057 | 67448218 | 67448057 | ID=Msa0745640-mRNA-1:cds;Parent=Msa0745640-mRNA-1 |
| chr5_1 | CDS | 67446504 | 67446614 | 67446504 | ID=Msa0745640-mRNA-1:cds;Parent=Msa0745640-mRNA-1 |
| chr5_1 | CDS | 67445749 | 67445823 | 67445749 | ID=Msa0745640-mRNA-1:cds;Parent=Msa0745640-mRNA-1 |
| chr5_1 | three_prime_UTR | 67445567 | 67445748 | 67445567 | ID=Msa0745640-mRNA-1:three_prime_utr;Parent=Msa0745640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
