AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0373620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373620 MtrunA17_Chr3g0123051 99.616 521 2 0 1 521 1 521 0.0 1072
Msa0373620 MtrunA17_Chr6g0458891 68.138 521 155 4 1 520 1 511 0.0 728
Msa0373620 MtrunA17_Chr3g0119261 64.015 528 171 5 1 513 1 524 0.0 658
Msa0373620 MtrunA17_Chr7g0264871 65.166 422 147 0 83 504 42 463 0.0 577
Msa0373620 MtrunA17_Chr1g0180401 59.322 472 185 3 37 506 16 482 0.0 569
Msa0373620 MtrunA17_Chr1g0210311 53.125 512 216 3 1 512 1 488 0.0 561
Msa0373620 MtrunA17_Chr1g0148671 52.918 514 216 4 1 512 1 490 0.0 546
Msa0373620 MtrunA17_Chr3g0138441 52.529 514 225 4 1 512 1 497 0.0 540
Msa0373620 MtrunA17_Chr4g0062821 51.093 503 224 5 1 500 1 484 0.0 519
Msa0373620 MtrunA17_Chr1g0211361 41.337 404 235 1 103 506 39 440 2.73e-117 353
Msa0373620 MtrunA17_Chr7g0273431 88.136 59 7 0 22 80 58 116 1.62e-26 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373620 AT3G26020.2 72.157 510 136 3 1 504 1 510 0.0 735
Msa0373620 AT3G26020.5 72.157 510 136 3 1 504 1 510 0.0 735
Msa0373620 AT3G26020.1 72.157 510 136 3 1 504 1 510 0.0 735
Msa0373620 AT3G26020.6 72.157 510 136 3 1 504 1 510 0.0 735
Msa0373620 AT1G13460.2 74.514 463 115 1 44 506 32 491 0.0 724
Msa0373620 AT1G13460.1 74.514 463 115 1 44 506 32 491 0.0 724
Msa0373620 AT4G15415.1 65.497 513 171 4 1 513 1 507 0.0 685
Msa0373620 AT4G15415.4 65.497 513 171 4 1 513 1 507 0.0 685
Msa0373620 AT4G15415.2 65.497 513 171 4 1 513 1 507 0.0 685
Msa0373620 AT4G15415.5 65.497 513 171 4 1 513 1 507 0.0 685
Msa0373620 AT3G21650.1 61.959 531 182 4 1 513 1 529 0.0 661
Msa0373620 AT3G21650.2 61.959 531 182 4 1 513 1 529 0.0 661
Msa0373620 AT3G26020.4 61.290 558 133 5 1 504 1 529 0.0 639
Msa0373620 AT3G26020.7 62.107 541 139 7 1 504 1 512 0.0 621
Msa0373620 AT3G26020.8 62.107 541 139 7 1 504 1 512 0.0 621
Msa0373620 AT3G26020.3 62.107 541 139 7 1 504 1 512 0.0 621
Msa0373620 AT3G26030.1 56.832 505 187 5 1 503 1 476 0.0 590
Msa0373620 AT3G09880.1 56.920 513 191 4 1 506 1 490 0.0 583
Msa0373620 AT5G03470.1 56.461 503 201 4 1 502 1 486 0.0 564
Msa0373620 AT5G25510.1 51.631 521 227 5 1 520 1 497 0.0 531
Msa0373620 AT4G15415.3 64.851 404 136 4 1 404 1 398 0.0 528
Msa0373620 AT3G54930.2 55.794 466 194 2 40 503 41 496 0.0 521
Msa0373620 AT3G54930.1 55.794 466 194 2 40 503 41 496 0.0 521
Msa0373620 AT3G54930.3 55.041 367 153 2 40 404 41 397 7.08e-136 399

Find 112 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATTTAATACCTGAAAA+TGG 0.154967 3_1:-72687753 None:intergenic
AGAAGAGCATAAATTGTTTC+TGG 0.170362 3_1:+72687459 Msa0373620:CDS
ATGAAGCTTTACCAGCATTT+AGG 0.170397 3_1:+72686807 Msa0373620:CDS
ATTCAAGAAATTGCCTTTCT+TGG 0.200582 3_1:-72691322 None:intergenic
GCTTAATCTTCTTTGTTGTT+TGG 0.228935 3_1:-72686212 None:intergenic
CTTAATCTTCTTTGTTGTTT+GGG 0.233357 3_1:-72686211 None:intergenic
CCCTTACCTAGATAAGAAAA+AGG 0.235090 3_1:+72686416 Msa0373620:five_prime_UTR
TGAAGCTTTACCAGCATTTA+GGG 0.264284 3_1:+72686808 Msa0373620:CDS
TCCTTTGAACTATTTGTTAT+CGG 0.271122 3_1:-72687619 None:intergenic
CAAACTTTGATTCACCGAAT+TGG 0.282750 3_1:+72686333 Msa0373620:five_prime_UTR
AGTTCAATTCAAAATCATTA+TGG 0.295945 3_1:+72686367 Msa0373620:five_prime_UTR
TTGATGAACTATGTTCAAAA+AGG 0.297427 3_1:+72686544 Msa0373620:exon
ATGTCTTTGCATCGGATCTA+TGG 0.305697 3_1:+72687289 Msa0373620:CDS
TCGGATCTATGGCAAGTTAA+TGG 0.326598 3_1:+72687300 Msa0373620:CDS
GAACATTTAAAGTCAAACTA+TGG 0.333782 3_1:-72691014 None:intergenic
AGCCTTCGATGGATCCTTCT+TGG 0.341747 3_1:+72687110 Msa0373620:CDS
CATTGATGGCGTTGAATTAG+AGG 0.343144 3_1:+72687081 Msa0373620:CDS
CTTTGACATTCACTTCCTAT+AGG 0.349671 3_1:+72691346 Msa0373620:three_prime_UTR
CAGAATCATCATCTTCATAT+CGG 0.351588 3_1:+72686456 Msa0373620:five_prime_UTR
AAACTTTGATTCACCGAATT+GGG 0.352067 3_1:+72686334 Msa0373620:five_prime_UTR
AAAATTTAATACCTGAAAAT+GGG 0.353230 3_1:-72687752 None:intergenic
CCATTGGAATTCTCATTCAT+AGG 0.353655 3_1:-72686770 None:intergenic
ACCATACATCGCTGGAATTC+TGG 0.359106 3_1:-72687691 None:intergenic
CTCTCTTTCTCTAGGATCTT+CGG 0.365168 3_1:-72687257 None:intergenic
AATTTATGCTCTTCTTTCAA+TGG 0.371325 3_1:-72687451 None:intergenic
CAACCTGGGAGTAGCAAAAC+TGG 0.401143 3_1:+72686677 Msa0373620:CDS
CGATATGAAGATGATGATTC+TGG 0.402321 3_1:-72686455 None:intergenic
CGTGAGAATAAGCTCATTGA+TGG 0.406564 3_1:+72687067 Msa0373620:CDS
TTATTGCATTACTCAGTTTG+TGG 0.408341 3_1:+72687543 Msa0373620:CDS
AAAATGCACTAGTTAGGCTT+TGG 0.408752 3_1:-72691423 None:intergenic
GGAGATTAAGAGACAAGCTT+TGG 0.411887 3_1:+72686931 Msa0373620:CDS
CGGAAAGAGCTTTGTTCTTG+TGG 0.412229 3_1:+72690884 Msa0373620:CDS
ATAAGGAAAATGCACTAGTT+AGG 0.419004 3_1:-72691429 None:intergenic
TGGGTTGAAAAGAGAGAGAA+AGG 0.424031 3_1:-72686192 None:intergenic
TTTGAGACTGAGAAGCATAA+TGG 0.425058 3_1:+72687376 Msa0373620:CDS
GTTACTTGCAGCTTTCTTTG+CGG 0.431372 3_1:-72691166 None:intergenic
ACTTTGAAGCATACCCAATT+CGG 0.436604 3_1:-72686347 None:intergenic
ATCTGCAGGTTAGATAGAAA+TGG 0.436689 3_1:+72691224 Msa0373620:exon
AGCTTATTCTCACGCGGTTG+AGG 0.441683 3_1:-72687058 None:intergenic
TGACCCTACTAAGCATCTTA+AGG 0.444211 3_1:+72686904 Msa0373620:CDS
TCTAATTCTTCTTTGAATGC+AGG 0.444424 3_1:+72686707 Msa0373620:CDS
TCCCATCATCTTTCCCGCGT+TGG 0.446029 3_1:+72690957 Msa0373620:CDS
ACTTGCTGATACAATCATAA+GGG 0.446448 3_1:+72687579 Msa0373620:CDS
TGGCGCATCGACCTTTCATC+AGG 0.446680 3_1:+72687320 Msa0373620:CDS
CTCCAACGCGGGAAAGATGA+TGG 0.449918 3_1:-72690959 None:intergenic
TTCAAATACTCTCTTTCTCT+AGG 0.456945 3_1:-72687265 None:intergenic
ATAAGAATTAAAATTACCAT+TGG 0.460065 3_1:-72686786 None:intergenic
GCTAACTTTGCATCCAGCTC+AGG 0.462884 3_1:-72687181 None:intergenic
TCCAGAATTCCAGCGATGTA+TGG 0.464531 3_1:+72687690 Msa0373620:CDS
AAATAGCCTTCAATTCCTAT+AGG 0.465971 3_1:-72691361 None:intergenic
TACTAAGCATCTTAAGGAAA+AGG 0.466933 3_1:+72686910 Msa0373620:CDS
TCACTTCCTATAGGAATTGA+AGG 0.467315 3_1:+72691355 Msa0373620:three_prime_UTR
TCAAAGGAAGTTATGTTCCT+AGG 0.480411 3_1:+72687634 Msa0373620:CDS
AACTTGCTGATACAATCATA+AGG 0.482131 3_1:+72687578 Msa0373620:CDS
AGAATCATCATCTTCATATC+GGG 0.486218 3_1:+72686457 Msa0373620:five_prime_UTR
TGTGATGGGTTGGCCAAGAA+AGG 0.487462 3_1:+72691309 Msa0373620:three_prime_UTR
GCTCAAGCTACAAAAGCATA+AGG 0.488332 3_1:-72691446 None:intergenic
CAGAACAAACACAAAGAAGA+AGG 0.490537 3_1:-72686520 None:intergenic
ATTTGTTGCATCACCTGAGC+TGG 0.492210 3_1:+72687168 Msa0373620:CDS
ATGGTGAAAATTAGAGAAGT+GGG 0.492325 3_1:+72686386 Msa0373620:five_prime_UTR
TTGATTGATTTCCTGATGAA+AGG 0.494201 3_1:-72687331 None:intergenic
CGAAGCCACATGGAAACGCT+TGG 0.500307 3_1:+72691134 Msa0373620:CDS
AGTTATGTTCCTAGGTGAGT+TGG 0.503134 3_1:+72687642 Msa0373620:CDS
CAGCAGGGCGCGAAGCCACA+TGG 0.503391 3_1:+72691124 Msa0373620:CDS
TGATACATTGCTAAGCACTT+TGG 0.506415 3_1:-72687508 None:intergenic
TTTCCTTAAGATGCTTAGTA+GGG 0.507948 3_1:-72686907 None:intergenic
GCACTACCTCGCAAATCTGC+AGG 0.509546 3_1:+72691210 Msa0373620:CDS
ATTTGAAAATGTCTTTGCAT+CGG 0.516512 3_1:+72687281 Msa0373620:CDS
TCATAAACAATTTGCAAATG+AGG 0.517103 3_1:-72687133 None:intergenic
AGGTGAGTTGGAAGAAGTCT+TGG 0.518621 3_1:+72687654 Msa0373620:CDS
TATGGTGAAAATTAGAGAAG+TGG 0.520205 3_1:+72686385 Msa0373620:five_prime_UTR
GGCTATTTATTATTAAGTAG+TGG 0.520358 3_1:+72691376 Msa0373620:three_prime_UTR
AAGGAAGGTGAAGTGACAGC+AGG 0.527915 3_1:+72691108 Msa0373620:CDS
GAGATCAGAAACAGTGGTGG+TGG 0.531625 3_1:-72686288 None:intergenic
AAGCACTTTGGTTTGTGCAA+CGG 0.534767 3_1:-72687496 None:intergenic
AGTGATGTTGTTACACAACC+TGG 0.535175 3_1:+72686662 Msa0373620:CDS
ATTTGCAAATGAGGCCAAGA+AGG 0.535632 3_1:-72687124 None:intergenic
TTCGGAACATCCCTAAATGC+TGG 0.537273 3_1:-72686818 None:intergenic
TACTGAGAATGTAATGCAAG+AGG 0.549162 3_1:+72686994 Msa0373620:CDS
TGGCGTTGAATTAGAGGAGG+AGG 0.556878 3_1:+72687087 Msa0373620:CDS
GCCGATAACAAATAGTTCAA+AGG 0.558222 3_1:+72687618 Msa0373620:CDS
CAAGGACAGTTTCATAGTCA+TGG 0.562679 3_1:+72686731 Msa0373620:CDS
CACATGGAAACGCTTGGAGG+AGG 0.564031 3_1:+72691140 Msa0373620:CDS
TTTGTATTTCTCTCCAACGC+GGG 0.566060 3_1:-72690970 None:intergenic
AAATTTAATACCTGAAAATG+GGG 0.572594 3_1:-72687751 None:intergenic
GTTTGAGCAAGACGAATCAA+AGG 0.576642 3_1:+72691089 Msa0373620:CDS
TCTTCTTTGAATGCAGGACA+AGG 0.584808 3_1:+72686713 Msa0373620:CDS
GGTTCTGAGAATCGTGAACA+AGG 0.586207 3_1:+72686599 Msa0373620:CDS
AATGCAAGAGGTTGTTAAGA+TGG 0.587807 3_1:+72687006 Msa0373620:CDS
AGAGGAGGAGGAGCCTTCGA+TGG 0.596230 3_1:+72687099 Msa0373620:CDS
ACAATAGCACCATACATCGC+TGG 0.596620 3_1:-72687699 None:intergenic
TCCAACGCGGGAAAGATGAT+GGG 0.597175 3_1:-72690958 None:intergenic
CTTGCTGATACAATCATAAG+GGG 0.598460 3_1:+72687580 Msa0373620:CDS
GGTGGAAATTCAAGAAGCCA+TGG 0.599824 3_1:+72686620 Msa0373620:CDS
CCTATGAATGAGAATTCCAA+TGG 0.604698 3_1:+72686770 Msa0373620:CDS
GTTTGATTAAGTTCACGATG+TGG 0.613263 3_1:-72690915 None:intergenic
ATCTAACCTGCAGATTTGCG+AGG 0.619938 3_1:-72691216 None:intergenic
AGCCACATGGAAACGCTTGG+AGG 0.620869 3_1:+72691137 Msa0373620:CDS
CTCCTCCAAGCGTTTCCATG+TGG 0.625054 3_1:-72691139 None:intergenic
AGACTTCTTCCAACTCACCT+AGG 0.632209 3_1:-72687651 None:intergenic
AGGAAGGTGAAGTGACAGCA+GGG 0.635472 3_1:+72691109 Msa0373620:CDS
GGCCAAGAAGGATCCATCGA+AGG 0.635777 3_1:-72687112 None:intergenic
GAGCAAGACGAATCAAAGGA+AGG 0.642249 3_1:+72691093 Msa0373620:CDS
TGATGGCGTTGAATTAGAGG+AGG 0.644796 3_1:+72687084 Msa0373620:CDS
TTTGAGATCAGAAACAGTGG+TGG 0.652847 3_1:-72686291 None:intergenic
GTGATGTTGTTACACAACCT+GGG 0.665655 3_1:+72686663 Msa0373620:CDS
AATTTAATACCTGAAAATGG+GGG 0.674910 3_1:-72687750 None:intergenic
ATACATCGCTGGAATTCTGG+AGG 0.675794 3_1:-72687688 None:intergenic
TATTCAAACAATGAGAAACA+CGG 0.684922 3_1:-72687726 None:intergenic
TCTGAGAATCGTGAACAAGG+TGG 0.686992 3_1:+72686602 Msa0373620:CDS
TCAATGAGCTTATTCTCACG+CGG 0.708503 3_1:-72687064 None:intergenic
TTGCTGATACAATCATAAGG+GGG 0.715338 3_1:+72687581 Msa0373620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGAATTAAAATTACCAT+TGG - chr3_1:72686789-72686808 None:intergenic 15.0%
!! AAAATTTAATACCTGAAAAT+GGG - chr3_1:72687755-72687774 None:intergenic 15.0%
!! AAAAACATTATCTTAAAGTT+AGG + chr3_1:72687824-72687843 Msa0373620:intron 15.0%
!!! AAATTATATAAAGCGTTTTA+TGG + chr3_1:72689554-72689573 Msa0373620:intron 15.0%
!! AGTTCAATTCAAAATCATTA+TGG + chr3_1:72686367-72686386 Msa0373620:five_prime_UTR 20.0%
!!! TGTTTTCTAGATTTGAAAAA+AGG + chr3_1:72686486-72686505 Msa0373620:five_prime_UTR 20.0%
!!! GTTTTCTAGATTTGAAAAAA+GGG + chr3_1:72686487-72686506 Msa0373620:five_prime_UTR 20.0%
!! AAATTTAATACCTGAAAATG+GGG - chr3_1:72687754-72687773 None:intergenic 20.0%
!! GAAAATTTAATACCTGAAAA+TGG - chr3_1:72687756-72687775 None:intergenic 20.0%
!! CAATAAGTAAAACAATCATA+TGG - chr3_1:72687874-72687893 None:intergenic 20.0%
!! CATATATGCATAACTAATTA+AGG + chr3_1:72688102-72688121 Msa0373620:intron 20.0%
!! TTAGCTAATTTAAAAGCTTA+TGG + chr3_1:72688368-72688387 Msa0373620:intron 20.0%
!! AAGAATAATCCAAAAGTTAA+AGG - chr3_1:72688484-72688503 None:intergenic 20.0%
!! ATATAAAAGTAACTTTGTAG+AGG - chr3_1:72689639-72689658 None:intergenic 20.0%
!!! TTTTGTCTAGTAATTGTAAT+AGG + chr3_1:72690025-72690044 Msa0373620:intron 20.0%
!! AACAATTATATGCTATATGT+TGG + chr3_1:72690101-72690120 Msa0373620:intron 20.0%
!!! GCTCTAAAAATTCAATAAAT+TGG - chr3_1:72690308-72690327 None:intergenic 20.0%
!! TTTACATTTAGAAGGTTTAA+GGG - chr3_1:72690428-72690447 None:intergenic 20.0%
!!! AATTATTGTTTGGCTTTTAT+TGG - chr3_1:72690766-72690785 None:intergenic 20.0%
!!! ATAGCTTCATTTTTTAAGAA+CGG + chr3_1:72691264-72691283 Msa0373620:three_prime_UTR 20.0%
!!! CGGATTTTATAGTATTTTTT+TGG + chr3_1:72691284-72691303 Msa0373620:three_prime_UTR 20.0%
!!! CTTAATCTTCTTTGTTGTTT+GGG - chr3_1:72686214-72686233 None:intergenic 25.0%
! TTGATGAACTATGTTCAAAA+AGG + chr3_1:72686544-72686563 Msa0373620:exon 25.0%
!!! ACTATGTTCAAAAAGGTATT+TGG + chr3_1:72686551-72686570 Msa0373620:exon 25.0%
!!! AGCTTTTTTATAAACAAGCT+CGG - chr3_1:72686854-72686873 None:intergenic 25.0%
! TCATAAACAATTTGCAAATG+AGG - chr3_1:72687136-72687155 None:intergenic 25.0%
!!! TTGATCAATCGTTTATTTTG+AGG + chr3_1:72687215-72687234 Msa0373620:CDS 25.0%
! ATTTGAAAATGTCTTTGCAT+CGG + chr3_1:72687281-72687300 Msa0373620:CDS 25.0%
! AATTTATGCTCTTCTTTCAA+TGG - chr3_1:72687454-72687473 None:intergenic 25.0%
!!! TCCTTTGAACTATTTGTTAT+CGG - chr3_1:72687622-72687641 None:intergenic 25.0%
! TATTCAAACAATGAGAAACA+CGG - chr3_1:72687729-72687748 None:intergenic 25.0%
! AATTTAATACCTGAAAATGG+GGG - chr3_1:72687753-72687772 None:intergenic 25.0%
!!! TTTTTTCAACGAAAAAAGAG+CGG - chr3_1:72687808-72687827 None:intergenic 25.0%
!!! TGAAAAGTATATCCTTTTCT+TGG - chr3_1:72687916-72687935 None:intergenic 25.0%
! CATATGATTATGACATTCTA+TGG - chr3_1:72688073-72688092 None:intergenic 25.0%
! GTTATAAGACACATATTTAC+TGG - chr3_1:72688150-72688169 None:intergenic 25.0%
! ATTTAAAAGCTTATGGTCTT+AGG + chr3_1:72688375-72688394 Msa0373620:intron 25.0%
!! TTAGTTGATGTTGCATTATT+GGG - chr3_1:72688407-72688426 None:intergenic 25.0%
!! TTTAGTTGATGTTGCATTAT+TGG - chr3_1:72688408-72688427 None:intergenic 25.0%
!!! CTTCTTTTACCTTTAACTTT+TGG + chr3_1:72688472-72688491 Msa0373620:intron 25.0%
! AATTCAGATAATATTCACAG+TGG - chr3_1:72688593-72688612 None:intergenic 25.0%
! TTTATGGGGAAAAATAGAAT+CGG - chr3_1:72688637-72688656 None:intergenic 25.0%
! ATAAGAATGTTATGTTGGAT+AGG - chr3_1:72688664-72688683 None:intergenic 25.0%
! CAGAAATAAGAATGTTATGT+TGG - chr3_1:72688669-72688688 None:intergenic 25.0%
!!! AATTTTCCTTTAAGCTTTAG+AGG + chr3_1:72688773-72688792 Msa0373620:intron 25.0%
! AAGTAGAAAAGATGAAATGA+AGG - chr3_1:72688832-72688851 None:intergenic 25.0%
! TGCATAAAAAATCCTTTGAA+AGG + chr3_1:72688969-72688988 Msa0373620:intron 25.0%
! ACCAAAACTATAGAAATTTG+TGG - chr3_1:72688998-72689017 None:intergenic 25.0%
! TTCCATGCATATGTTTAAAA+AGG - chr3_1:72689145-72689164 None:intergenic 25.0%
!!! GAACAAACTGTAACTTTTTT+CGG - chr3_1:72689220-72689239 None:intergenic 25.0%
! AAGATCTATTGTTATGTATG+AGG + chr3_1:72689345-72689364 Msa0373620:intron 25.0%
! AGATCTATTGTTATGTATGA+GGG + chr3_1:72689346-72689365 Msa0373620:intron 25.0%
! ATCAAAAATAACTGCTAACA+GGG - chr3_1:72689431-72689450 None:intergenic 25.0%
! AATCAAAAATAACTGCTAAC+AGG - chr3_1:72689432-72689451 None:intergenic 25.0%
! TTTCTATTGATATGTCAAAC+AGG + chr3_1:72689603-72689622 Msa0373620:intron 25.0%
! AAACCTTCCTAAATTATGAA+GGG - chr3_1:72689669-72689688 None:intergenic 25.0%
! TAAACCTTCCTAAATTATGA+AGG - chr3_1:72689670-72689689 None:intergenic 25.0%
! TCATTCTTGTCTATTATACA+CGG - chr3_1:72689887-72689906 None:intergenic 25.0%
! CAATTACTAGACAAAACTTA+TGG - chr3_1:72690021-72690040 None:intergenic 25.0%
!! TTTTCTTTCATTACATGTCT+CGG + chr3_1:72690346-72690365 Msa0373620:intron 25.0%
! CTTTACATTTAGAAGGTTTA+AGG - chr3_1:72690429-72690448 None:intergenic 25.0%
! CTTTGTTCTTTACATTTAGA+AGG - chr3_1:72690436-72690455 None:intergenic 25.0%
!!! AAACACTTCTAGAATGAAAT+TGG - chr3_1:72690483-72690502 None:intergenic 25.0%
! ACTCTGCATAAATTATTGTT+TGG - chr3_1:72690776-72690795 None:intergenic 25.0%
! AGAGAAATACAAAAACTCAT+TGG + chr3_1:72690980-72690999 Msa0373620:CDS 25.0%
!! GAACATTTAAAGTCAAACTA+TGG - chr3_1:72691017-72691036 None:intergenic 25.0%
! GGCTATTTATTATTAAGTAG+TGG + chr3_1:72691376-72691395 Msa0373620:three_prime_UTR 25.0%
!! GCTTAATCTTCTTTGTTGTT+TGG - chr3_1:72686215-72686234 None:intergenic 30.0%
AAACTTTGATTCACCGAATT+GGG + chr3_1:72686334-72686353 Msa0373620:five_prime_UTR 30.0%
TATGGTGAAAATTAGAGAAG+TGG + chr3_1:72686385-72686404 Msa0373620:five_prime_UTR 30.0%
ATGGTGAAAATTAGAGAAGT+GGG + chr3_1:72686386-72686405 Msa0373620:five_prime_UTR 30.0%
! CCTTTTTCTTATCTAGGTAA+GGG - chr3_1:72686419-72686438 None:intergenic 30.0%
CCTTACCTAGATAAGAAAAA+GGG + chr3_1:72686417-72686436 Msa0373620:five_prime_UTR 30.0%
! ACAAACCCTTTTTCTTATCT+AGG - chr3_1:72686425-72686444 None:intergenic 30.0%
CAGAATCATCATCTTCATAT+CGG + chr3_1:72686456-72686475 Msa0373620:five_prime_UTR 30.0%
AGAATCATCATCTTCATATC+GGG + chr3_1:72686457-72686476 Msa0373620:five_prime_UTR 30.0%
ATTCCTAAAAAGTCCTCAAA+AGG + chr3_1:72686578-72686597 Msa0373620:CDS 30.0%
!!! AACAACATCACTGTTTTTTG+AGG - chr3_1:72686654-72686673 None:intergenic 30.0%
TCTAATTCTTCTTTGAATGC+AGG + chr3_1:72686707-72686726 Msa0373620:CDS 30.0%
! TATAAACAAGCTCGGTTTTT+CGG - chr3_1:72686846-72686865 None:intergenic 30.0%
TTTCCTTAAGATGCTTAGTA+GGG - chr3_1:72686910-72686929 None:intergenic 30.0%
! TTTTCCTTAAGATGCTTAGT+AGG - chr3_1:72686911-72686930 None:intergenic 30.0%
TACTAAGCATCTTAAGGAAA+AGG + chr3_1:72686910-72686929 Msa0373620:CDS 30.0%
TTCAAATACTCTCTTTCTCT+AGG - chr3_1:72687268-72687287 None:intergenic 30.0%
! TTGATTGATTTCCTGATGAA+AGG - chr3_1:72687334-72687353 None:intergenic 30.0%
! TAATGGAATTGCTGAGTTTT+TGG + chr3_1:72687393-72687412 Msa0373620:CDS 30.0%
!! TGCTGAGTTTTTGGAAATTT+TGG + chr3_1:72687402-72687421 Msa0373620:CDS 30.0%
!! GCTGAGTTTTTGGAAATTTT+GGG + chr3_1:72687403-72687422 Msa0373620:CDS 30.0%
!! CTGAGTTTTTGGAAATTTTG+GGG + chr3_1:72687404-72687423 Msa0373620:CDS 30.0%
!!! ATTTTGGGGAGTATCATTAA+TGG + chr3_1:72687418-72687437 Msa0373620:CDS 30.0%
! AGAAGAGCATAAATTGTTTC+TGG + chr3_1:72687459-72687478 Msa0373620:CDS 30.0%
TTATTGCATTACTCAGTTTG+TGG + chr3_1:72687543-72687562 Msa0373620:CDS 30.0%
!! AACTTGCTGATACAATCATA+AGG + chr3_1:72687578-72687597 Msa0373620:CDS 30.0%
! ACTTGCTGATACAATCATAA+GGG + chr3_1:72687579-72687598 Msa0373620:CDS 30.0%
AGTTGTAAGTATGTGTCTTA+AGG - chr3_1:72687974-72687993 None:intergenic 30.0%
TGGATTACAACAAATAACCA+GGG - chr3_1:72688053-72688072 None:intergenic 30.0%
! ATGGATTACAACAAATAACC+AGG - chr3_1:72688054-72688073 None:intergenic 30.0%
!! ATTTTTCAAACACCTTTTGC+AGG - chr3_1:72688253-72688272 None:intergenic 30.0%
TTAATCTTGATGCAAGCTTA+AGG + chr3_1:72688287-72688306 Msa0373620:intron 30.0%
! CTCTCTTGTGCTATTAATTT+CGG + chr3_1:72688336-72688355 Msa0373620:intron 30.0%
!! AAAGTACCTCTAAAGCTTAA+AGG - chr3_1:72688782-72688801 None:intergenic 30.0%
! TGGAAATTTTCAGCTGTAAT+TGG - chr3_1:72688896-72688915 None:intergenic 30.0%
TGTACTTTCACTTTCATCAA+TGG - chr3_1:72688919-72688938 None:intergenic 30.0%
! GCCACAAATTTCTATAGTTT+TGG + chr3_1:72688994-72689013 Msa0373620:intron 30.0%
! CACCTTTTTAAACATATGCA+TGG + chr3_1:72689140-72689159 Msa0373620:intron 30.0%
!!! ACTGTAACTTTTTTCGGATT+GGG - chr3_1:72689214-72689233 None:intergenic 30.0%
!!! AACTGTAACTTTTTTCGGAT+TGG - chr3_1:72689215-72689234 None:intergenic 30.0%
AGTGAGTTCAATATCTCATA+TGG + chr3_1:72689269-72689288 Msa0373620:intron 30.0%
! GGTGTCATAAATGTAGTAAT+TGG - chr3_1:72689410-72689429 None:intergenic 30.0%
AGTATCATAAACTCTTCTCA+AGG - chr3_1:72689528-72689547 None:intergenic 30.0%
!! TAAAAGTGTTTGTAAGCTTG+TGG + chr3_1:72689701-72689720 Msa0373620:intron 30.0%
! CTTGAAGGTAATTTTTGTGT+TGG + chr3_1:72689724-72689743 Msa0373620:intron 30.0%
AGCTGTGACGATAAATAATT+AGG + chr3_1:72689911-72689930 Msa0373620:intron 30.0%
TGTGACGATAAATAATTAGG+TGG + chr3_1:72689914-72689933 Msa0373620:intron 30.0%
ATAAAGTATAGACGATTTGC+AGG - chr3_1:72689951-72689970 None:intergenic 30.0%
AAGACATACTATATTCTGTC+AGG + chr3_1:72690065-72690084 Msa0373620:intron 30.0%
GACGAATCTAAATTTGACAT+GGG - chr3_1:72690201-72690220 None:intergenic 30.0%
TGACGAATCTAAATTTGACA+TGG - chr3_1:72690202-72690221 None:intergenic 30.0%
AAGAAAAAATGACAGAACAC+TGG - chr3_1:72690333-72690352 None:intergenic 30.0%
! ATTTTTCTTCGTCTTTTGCA+TGG + chr3_1:72690545-72690564 Msa0373620:intron 30.0%
!! TTTGTTGCTTTCTTCATTGA+TGG + chr3_1:72690572-72690591 Msa0373620:intron 30.0%
!! TTGTTGCTTTCTTCATTGAT+GGG + chr3_1:72690573-72690592 Msa0373620:intron 30.0%
TCTACAGCAATTCAAGATTT+AGG - chr3_1:72690611-72690630 None:intergenic 30.0%
AAATCTTGAATTGCTGTAGA+AGG + chr3_1:72690611-72690630 Msa0373620:intron 30.0%
GATTATATGCATCAAGTGAA+TGG + chr3_1:72690709-72690728 Msa0373620:intron 30.0%
!! TTTTGAGAAAGATCCAACTT+TGG + chr3_1:72690739-72690758 Msa0373620:intron 30.0%
TTTGAGAAAGATCCAACTTT+GGG + chr3_1:72690740-72690759 Msa0373620:intron 30.0%
! ACTGATATTGTCTTTGTTTC+AGG + chr3_1:72690858-72690877 Msa0373620:intron 30.0%
!!! AGTATTTTTTTGGCATGTGA+TGG + chr3_1:72691294-72691313 Msa0373620:three_prime_UTR 30.0%
!!! GTATTTTTTTGGCATGTGAT+GGG + chr3_1:72691295-72691314 Msa0373620:three_prime_UTR 30.0%
ATTCAAGAAATTGCCTTTCT+TGG - chr3_1:72691325-72691344 None:intergenic 30.0%
AAATAGCCTTCAATTCCTAT+AGG - chr3_1:72691364-72691383 None:intergenic 30.0%
ATAAGGAAAATGCACTAGTT+AGG - chr3_1:72691432-72691451 None:intergenic 30.0%
!!! CTTTTTGAGATCAGAAACAG+TGG - chr3_1:72686297-72686316 None:intergenic 35.0%
CAAACTTTGATTCACCGAAT+TGG + chr3_1:72686333-72686352 Msa0373620:five_prime_UTR 35.0%
!! ACTTTGAAGCATACCCAATT+CGG - chr3_1:72686350-72686369 None:intergenic 35.0%
CCCTTACCTAGATAAGAAAA+AGG + chr3_1:72686416-72686435 Msa0373620:five_prime_UTR 35.0%
! CCCTTTTTCTTATCTAGGTA+AGG - chr3_1:72686420-72686439 None:intergenic 35.0%
CGATATGAAGATGATGATTC+TGG - chr3_1:72686458-72686477 None:intergenic 35.0%
CAGAACAAACACAAAGAAGA+AGG - chr3_1:72686523-72686542 None:intergenic 35.0%
!! GAACCTTTTGAGGACTTTTT+AGG - chr3_1:72686584-72686603 None:intergenic 35.0%
CCATTGGAATTCTCATTCAT+AGG - chr3_1:72686773-72686792 None:intergenic 35.0%
CCTATGAATGAGAATTCCAA+TGG + chr3_1:72686770-72686789 Msa0373620:CDS 35.0%
ATGAAGCTTTACCAGCATTT+AGG + chr3_1:72686807-72686826 Msa0373620:CDS 35.0%
TGAAGCTTTACCAGCATTTA+GGG + chr3_1:72686808-72686827 Msa0373620:CDS 35.0%
TACTGAGAATGTAATGCAAG+AGG + chr3_1:72686994-72687013 Msa0373620:CDS 35.0%
AATGCAAGAGGTTGTTAAGA+TGG + chr3_1:72687006-72687025 Msa0373620:CDS 35.0%
! TTTGAGACTGAGAAGCATAA+TGG + chr3_1:72687376-72687395 Msa0373620:CDS 35.0%
TGATACATTGCTAAGCACTT+TGG - chr3_1:72687511-72687530 None:intergenic 35.0%
CTTGCTGATACAATCATAAG+GGG + chr3_1:72687580-72687599 Msa0373620:CDS 35.0%
TTGCTGATACAATCATAAGG+GGG + chr3_1:72687581-72687600 Msa0373620:CDS 35.0%
GCCGATAACAAATAGTTCAA+AGG + chr3_1:72687618-72687637 Msa0373620:CDS 35.0%
TCAAAGGAAGTTATGTTCCT+AGG + chr3_1:72687634-72687653 Msa0373620:CDS 35.0%
GGTAAAAGAAAATGAGCTTG+AGG - chr3_1:72687787-72687806 None:intergenic 35.0%
CAAAAATCGTTCCTGAACTA+CGG + chr3_1:72688002-72688021 Msa0373620:intron 35.0%
ACACATATTTACTGGAAACC+TGG - chr3_1:72688142-72688161 None:intergenic 35.0%
GTTTAGCAGCTTTCTATGAA+GGG - chr3_1:72688184-72688203 None:intergenic 35.0%
TGTTTAGCAGCTTTCTATGA+AGG - chr3_1:72688185-72688204 None:intergenic 35.0%
TAATAGCACAAGAGAGATGA+GGG - chr3_1:72688332-72688351 None:intergenic 35.0%
TTAATAGCACAAGAGAGATG+AGG - chr3_1:72688333-72688352 None:intergenic 35.0%
TATATGCCAACCATTAAGAG+TGG - chr3_1:72688440-72688459 None:intergenic 35.0%
!! GAGCTATAGAAGCATTGATA+AGG - chr3_1:72688522-72688541 None:intergenic 35.0%
TAGTAGAATCTTGTCCTATG+CGG - chr3_1:72688564-72688583 None:intergenic 35.0%
!!! TGTTGGATAGGTGGTTTTAT+GGG - chr3_1:72688652-72688671 None:intergenic 35.0%
!! ATGTTGGATAGGTGGTTTTA+TGG - chr3_1:72688653-72688672 None:intergenic 35.0%
AGAATGTTATGTTGGATAGG+TGG - chr3_1:72688661-72688680 None:intergenic 35.0%
! TCTTTTCTACTTGAACCCTA+TGG + chr3_1:72688840-72688859 Msa0373620:intron 35.0%
ACATTTGTGATTCCCAACAA+TGG - chr3_1:72688869-72688888 None:intergenic 35.0%
ACTTTCACTTTCATCAATGG+TGG - chr3_1:72688916-72688935 None:intergenic 35.0%
AATTTGTGGCATCCTTTCAA+AGG - chr3_1:72688984-72689003 None:intergenic 35.0%
!!! TCTATAGTTTTGGTCCTAAG+AGG + chr3_1:72689004-72689023 Msa0373620:intron 35.0%
TCTATACACAGACTACATAG+AGG - chr3_1:72689033-72689052 None:intergenic 35.0%
ACCTTCTTTCTCTATCAAGA+AGG + chr3_1:72689319-72689338 Msa0373620:intron 35.0%
CTATTGTTATGTATGAGGGA+TGG + chr3_1:72689350-72689369 Msa0373620:intron 35.0%
TAACATACAACTCCCATTGT+AGG + chr3_1:72689458-72689477 Msa0373620:intron 35.0%
AACATACAACTCCCATTGTA+GGG + chr3_1:72689459-72689478 Msa0373620:intron 35.0%
TCCTAGTAACTTCACATTGA+AGG + chr3_1:72689483-72689502 Msa0373620:intron 35.0%
TCCTTCAATGTGAAGTTACT+AGG - chr3_1:72689487-72689506 None:intergenic 35.0%
AGTACGTCCCTTCATAATTT+AGG + chr3_1:72689659-72689678 Msa0373620:intron 35.0%
! AATGACTATCTTTTCCCTAG+AGG + chr3_1:72689777-72689796 Msa0373620:intron 35.0%
CATAAGATCAACTTCCTCTA+GGG - chr3_1:72689794-72689813 None:intergenic 35.0%
ACATAAGATCAACTTCCTCT+AGG - chr3_1:72689795-72689814 None:intergenic 35.0%
GTTGATCTTATGTTCATCTG+AGG + chr3_1:72689802-72689821 Msa0373620:intron 35.0%
GTTGATGTCTTTATCTGAAG+AGG + chr3_1:72689986-72690005 Msa0373620:intron 35.0%
CAAAGATACACTATCACTAG+TGG - chr3_1:72690169-72690188 None:intergenic 35.0%
CTAAGCATGGCATACATAAA+AGG - chr3_1:72690395-72690414 None:intergenic 35.0%
AAAGAACAAAGCATGTGTCA+AGG + chr3_1:72690445-72690464 Msa0373620:intron 35.0%
AAGAACAAAGCATGTGTCAA+GGG + chr3_1:72690446-72690465 Msa0373620:intron 35.0%
AATTCAAGATTTAGGCGCAT+AGG - chr3_1:72690603-72690622 None:intergenic 35.0%
TGAGTAATAGAGACATCATG+CGG - chr3_1:72690671-72690690 None:intergenic 35.0%
! GATATTGTCTTTGTTTCAGG+TGG + chr3_1:72690861-72690880 Msa0373620:intron 35.0%
GTTTGATTAAGTTCACGATG+TGG - chr3_1:72690918-72690937 None:intergenic 35.0%
! TTTTGTATTTCTCTCCAACG+CGG - chr3_1:72690974-72690993 None:intergenic 35.0%
ATCTGCAGGTTAGATAGAAA+TGG + chr3_1:72691224-72691243 Msa0373620:exon 35.0%
CTTTGACATTCACTTCCTAT+AGG + chr3_1:72691346-72691365 Msa0373620:three_prime_UTR 35.0%
TCACTTCCTATAGGAATTGA+AGG + chr3_1:72691355-72691374 Msa0373620:three_prime_UTR 35.0%
AAAATGCACTAGTTAGGCTT+TGG - chr3_1:72691426-72691445 None:intergenic 35.0%
! TGGGTTGAAAAGAGAGAGAA+AGG - chr3_1:72686195-72686214 None:intergenic 40.0%
! TTTGAGATCAGAAACAGTGG+TGG - chr3_1:72686294-72686313 None:intergenic 40.0%
! ACGATTCTCAGAACCTTTTG+AGG - chr3_1:72686594-72686613 None:intergenic 40.0%
!!! TTTTTGAGGTTGCAACACCA+TGG - chr3_1:72686640-72686659 None:intergenic 40.0%
AGTGATGTTGTTACACAACC+TGG + chr3_1:72686662-72686681 Msa0373620:CDS 40.0%
GTGATGTTGTTACACAACCT+GGG + chr3_1:72686663-72686682 Msa0373620:CDS 40.0%
TCTTCTTTGAATGCAGGACA+AGG + chr3_1:72686713-72686732 Msa0373620:CDS 40.0%
CAAGGACAGTTTCATAGTCA+TGG + chr3_1:72686731-72686750 Msa0373620:CDS 40.0%
!! AAGCTCGGTTTTTCGGAATT+CGG - chr3_1:72686839-72686858 None:intergenic 40.0%
TGACCCTACTAAGCATCTTA+AGG + chr3_1:72686904-72686923 Msa0373620:CDS 40.0%
GGAGATTAAGAGACAAGCTT+TGG + chr3_1:72686931-72686950 Msa0373620:CDS 40.0%
TCAATGAGCTTATTCTCACG+CGG - chr3_1:72687067-72687086 None:intergenic 40.0%
CGTGAGAATAAGCTCATTGA+TGG + chr3_1:72687067-72687086 Msa0373620:CDS 40.0%
!! CATTGATGGCGTTGAATTAG+AGG + chr3_1:72687081-72687100 Msa0373620:CDS 40.0%
ATTTGCAAATGAGGCCAAGA+AGG - chr3_1:72687127-72687146 None:intergenic 40.0%
!! CTCTCTTTCTCTAGGATCTT+CGG - chr3_1:72687260-72687279 None:intergenic 40.0%
ATGTCTTTGCATCGGATCTA+TGG + chr3_1:72687289-72687308 Msa0373620:CDS 40.0%
TCGGATCTATGGCAAGTTAA+TGG + chr3_1:72687300-72687319 Msa0373620:CDS 40.0%
!! AAGCACTTTGGTTTGTGCAA+CGG - chr3_1:72687499-72687518 None:intergenic 40.0%
TAAGGGGGTTATTGAAGTAC+TGG + chr3_1:72687596-72687615 Msa0373620:CDS 40.0%
AGTTATGTTCCTAGGTGAGT+TGG + chr3_1:72687642-72687661 Msa0373620:CDS 40.0%
! TTTGAATAGCCCCCATTTTC+AGG + chr3_1:72687741-72687760 Msa0373620:CDS 40.0%
GATTATATGCAACAAGTCCC+TGG + chr3_1:72688033-72688052 Msa0373620:intron 40.0%
AGAAAGCTGCTAAACATGCT+AGG + chr3_1:72688189-72688208 Msa0373620:intron 40.0%
ATCTTGATGCAAGCTTAAGG+TGG + chr3_1:72688290-72688309 Msa0373620:intron 40.0%
AATAGCACAAGAGAGATGAG+GGG - chr3_1:72688331-72688350 None:intergenic 40.0%
! AAGCTTATGGTCTTAGGAGA+TGG + chr3_1:72688381-72688400 Msa0373620:intron 40.0%
!! ACCTCTGAAACCACTCTTAA+TGG + chr3_1:72688427-72688446 Msa0373620:intron 40.0%
ACCATTAAGAGTGGTTTCAG+AGG - chr3_1:72688431-72688450 None:intergenic 40.0%
CTGAAACCACTCTTAATGGT+TGG + chr3_1:72688431-72688450 Msa0373620:intron 40.0%
GGTTGGCATATAGTTCTTCT+TGG + chr3_1:72688448-72688467 Msa0373620:intron 40.0%
!!! GTTGGATAGGTGGTTTTATG+GGG - chr3_1:72688651-72688670 None:intergenic 40.0%
GTTGTACGTGAGTGAATGTT+GGG - chr3_1:72688726-72688745 None:intergenic 40.0%
TGTTGTACGTGAGTGAATGT+TGG - chr3_1:72688727-72688746 None:intergenic 40.0%
AACCCTATGGTTTCCATTGT+TGG + chr3_1:72688853-72688872 Msa0373620:intron 40.0%
ACCCTATGGTTTCCATTGTT+GGG + chr3_1:72688854-72688873 Msa0373620:intron 40.0%
TCCCAACAATGGAAACCATA+GGG - chr3_1:72688858-72688877 None:intergenic 40.0%
TTCCCAACAATGGAAACCAT+AGG - chr3_1:72688859-72688878 None:intergenic 40.0%
GTCTGTGTATAGACTTTCCT+TGG + chr3_1:72689040-72689059 Msa0373620:intron 40.0%
! CTTACTGTTTTGTGTCTGCT+TGG - chr3_1:72689251-72689270 None:intergenic 40.0%
CATATGGACTCATTTCAGCA+TGG + chr3_1:72689285-72689304 Msa0373620:intron 40.0%
GCCTTCTTGATAGAGAAAGA+AGG - chr3_1:72689323-72689342 None:intergenic 40.0%
GTTACTAGGATCCCTACAAT+GGG - chr3_1:72689473-72689492 None:intergenic 40.0%
AGTTACTAGGATCCCTACAA+TGG - chr3_1:72689474-72689493 None:intergenic 40.0%
CGTCCCTTCATAATTTAGGA+AGG + chr3_1:72689663-72689682 Msa0373620:intron 40.0%
TTTGTAAGCTTGTGGCTTGA+AGG + chr3_1:72689709-72689728 Msa0373620:intron 40.0%
!! TGCCGACTTTCTGTTCATTA+TGG + chr3_1:72689861-72689880 Msa0373620:intron 40.0%
GGCCATAATGAACAGAAAGT+CGG - chr3_1:72689866-72689885 None:intergenic 40.0%
GTCTTTATCTGAAGAGGTGA+AGG + chr3_1:72689992-72690011 Msa0373620:intron 40.0%
GGGATCGTAAAAACTAAGCA+TGG - chr3_1:72690408-72690427 None:intergenic 40.0%
!! TCTAGAAGTGTTTGCATGAC+TGG + chr3_1:72690490-72690509 Msa0373620:intron 40.0%
CTACTGCAATTTGCAAGACT+TGG + chr3_1:72690635-72690654 Msa0373620:intron 40.0%
! ATTGTCTTTGTTTCAGGTGG+CGG + chr3_1:72690864-72690883 Msa0373620:intron 40.0%
TTTGTATTTCTCTCCAACGC+GGG - chr3_1:72690973-72690992 None:intergenic 40.0%
GTTTGAGCAAGACGAATCAA+AGG + chr3_1:72691089-72691108 Msa0373620:CDS 40.0%
GTTACTTGCAGCTTTCTTTG+CGG - chr3_1:72691169-72691188 None:intergenic 40.0%
!!! TTTTTTGGCATGTGATGGGT+TGG + chr3_1:72691299-72691318 Msa0373620:three_prime_UTR 40.0%
! GCTCAAGCTACAAAAGCATA+AGG - chr3_1:72691449-72691468 None:intergenic 40.0%
!! GGTTCTGAGAATCGTGAACA+AGG + chr3_1:72686599-72686618 Msa0373620:CDS 45.0%
TCTGAGAATCGTGAACAAGG+TGG + chr3_1:72686602-72686621 Msa0373620:CDS 45.0%
GGTGGAAATTCAAGAAGCCA+TGG + chr3_1:72686620-72686639 Msa0373620:CDS 45.0%
! TTACCAGTTTTGCTACTCCC+AGG - chr3_1:72686683-72686702 None:intergenic 45.0%
TTCGGAACATCCCTAAATGC+TGG - chr3_1:72686821-72686840 None:intergenic 45.0%
! TGATGGCGTTGAATTAGAGG+AGG + chr3_1:72687084-72687103 Msa0373620:CDS 45.0%
! ATTTGTTGCATCACCTGAGC+TGG + chr3_1:72687168-72687187 Msa0373620:CDS 45.0%
AGACTTCTTCCAACTCACCT+AGG - chr3_1:72687654-72687673 None:intergenic 45.0%
! AGGTGAGTTGGAAGAAGTCT+TGG + chr3_1:72687654-72687673 Msa0373620:CDS 45.0%
ATACATCGCTGGAATTCTGG+AGG - chr3_1:72687691-72687710 None:intergenic 45.0%
TCCAGAATTCCAGCGATGTA+TGG + chr3_1:72687690-72687709 Msa0373620:CDS 45.0%
ACCATACATCGCTGGAATTC+TGG - chr3_1:72687694-72687713 None:intergenic 45.0%
ACAATAGCACCATACATCGC+TGG - chr3_1:72687702-72687721 None:intergenic 45.0%
GCAGTGTTCTTGCCAAGAAA+AGG + chr3_1:72687901-72687920 Msa0373620:intron 45.0%
! AAGGAGTACAGTCAGATTCC+AGG + chr3_1:72688121-72688140 Msa0373620:intron 45.0%
! CAGGCAGGGTTTGAAGTAAA+AGG - chr3_1:72688234-72688253 None:intergenic 45.0%
! TCAAACACCTTTTGCAGGCA+GGG - chr3_1:72688248-72688267 None:intergenic 45.0%
! TTCAAACACCTTTTGCAGGC+AGG - chr3_1:72688249-72688268 None:intergenic 45.0%
ATGCAAGCTTAAGGTGGTGA+GGG + chr3_1:72688296-72688315 Msa0373620:intron 45.0%
ATAGCACAAGAGAGATGAGG+GGG - chr3_1:72688330-72688349 None:intergenic 45.0%
AATCTTGTCCTATGCGGTCT+GGG - chr3_1:72688558-72688577 None:intergenic 45.0%
CTACATAGAGGCTTCCTCTT+AGG - chr3_1:72689021-72689040 None:intergenic 45.0%
ACCCTACTGCTATCTGACTT+AGG + chr3_1:72689164-72689183 Msa0373620:intron 45.0%
CCCTAAGTCAGATAGCAGTA+GGG - chr3_1:72689168-72689187 None:intergenic 45.0%
CCCTACTGCTATCTGACTTA+GGG + chr3_1:72689165-72689184 Msa0373620:intron 45.0%
ACCCTAAGTCAGATAGCAGT+AGG - chr3_1:72689169-72689188 None:intergenic 45.0%
TTGTGTCTGCTTGGTCATCA+AGG - chr3_1:72689242-72689261 None:intergenic 45.0%
ACATGCAAAAAGTCGTGCAG+AGG - chr3_1:72689387-72689406 None:intergenic 45.0%
CAAAGCATGTGTCAAGGGAT+TGG + chr3_1:72690451-72690470 Msa0373620:intron 45.0%
! GGCTTTTATTGGCCCAAAGT+TGG - chr3_1:72690755-72690774 None:intergenic 45.0%
!! CGGAAAGAGCTTTGTTCTTG+TGG + chr3_1:72690884-72690903 Msa0373620:CDS 45.0%
GAGCAAGACGAATCAAAGGA+AGG + chr3_1:72691093-72691112 Msa0373620:CDS 45.0%
ATCTAACCTGCAGATTTGCG+AGG - chr3_1:72691219-72691238 None:intergenic 45.0%
GAGATCAGAAACAGTGGTGG+TGG - chr3_1:72686291-72686310 None:intergenic 50.0%
CAACCTGGGAGTAGCAAAAC+TGG + chr3_1:72686677-72686696 Msa0373620:CDS 50.0%
AGCTTATTCTCACGCGGTTG+AGG - chr3_1:72687061-72687080 None:intergenic 50.0%
! TGGCGTTGAATTAGAGGAGG+AGG + chr3_1:72687087-72687106 Msa0373620:CDS 50.0%
AGCCTTCGATGGATCCTTCT+TGG + chr3_1:72687110-72687129 Msa0373620:CDS 50.0%
GCTAACTTTGCATCCAGCTC+AGG - chr3_1:72687184-72687203 None:intergenic 50.0%
ATCGAGCAAGTCCGTAGTTC+AGG - chr3_1:72688016-72688035 None:intergenic 50.0%
CTTCAAACCCTGCCTGCAAA+AGG + chr3_1:72688238-72688257 Msa0373620:intron 50.0%
GATGCAAGCTTAAGGTGGTG+AGG + chr3_1:72688295-72688314 Msa0373620:intron 50.0%
GAATCTTGTCCTATGCGGTC+TGG - chr3_1:72688559-72688578 None:intergenic 50.0%
AACACAGCGAAACTGCTCCA+AGG - chr3_1:72689060-72689079 None:intergenic 50.0%
TTTCCTGACCTGGAGTGTGT+CGG - chr3_1:72689088-72689107 None:intergenic 50.0%
TCCAGGTCAGGAAACAGTCA+GGG + chr3_1:72689094-72689113 Msa0373620:intron 50.0%
TCCAGTTCCTTCGTGACCAA+TGG + chr3_1:72690803-72690822 Msa0373620:intron 50.0%
TCCATTGGTCACGAAGGAAC+TGG - chr3_1:72690807-72690826 None:intergenic 50.0%
CATTGCAACTGCAGCTCCAT+TGG - chr3_1:72690822-72690841 None:intergenic 50.0%
TCCAACGCGGGAAAGATGAT+GGG - chr3_1:72690961-72690980 None:intergenic 50.0%
AAGGAAGGTGAAGTGACAGC+AGG + chr3_1:72691108-72691127 Msa0373620:CDS 50.0%
AGGAAGGTGAAGTGACAGCA+GGG + chr3_1:72691109-72691128 Msa0373620:CDS 50.0%
!! TGTGATGGGTTGGCCAAGAA+AGG + chr3_1:72691309-72691328 Msa0373620:three_prime_UTR 50.0%
GGCCAAGAAGGATCCATCGA+AGG - chr3_1:72687115-72687134 None:intergenic 55.0%
! TGGCGCATCGACCTTTCATC+AGG + chr3_1:72687320-72687339 Msa0373620:CDS 55.0%
AGCTTAAGGTGGTGAGGGTG+AGG + chr3_1:72688301-72688320 Msa0373620:intron 55.0%
GCTTAAGGTGGTGAGGGTGA+GGG + chr3_1:72688302-72688321 Msa0373620:intron 55.0%
CATTTGTGCCCAGACCGCAT+AGG + chr3_1:72688547-72688566 Msa0373620:intron 55.0%
CTCCAGGTCAGGAAACAGTC+AGG + chr3_1:72689093-72689112 Msa0373620:intron 55.0%
TGCAGCTCCATTGGTCACGA+AGG - chr3_1:72690813-72690832 None:intergenic 55.0%
TCCCATCATCTTTCCCGCGT+TGG + chr3_1:72690957-72690976 Msa0373620:CDS 55.0%
CTCCAACGCGGGAAAGATGA+TGG - chr3_1:72690962-72690981 None:intergenic 55.0%
CGAAGCCACATGGAAACGCT+TGG + chr3_1:72691134-72691153 Msa0373620:CDS 55.0%
AGCCACATGGAAACGCTTGG+AGG + chr3_1:72691137-72691156 Msa0373620:CDS 55.0%
CTCCTCCAAGCGTTTCCATG+TGG - chr3_1:72691142-72691161 None:intergenic 55.0%
CACATGGAAACGCTTGGAGG+AGG + chr3_1:72691140-72691159 Msa0373620:CDS 55.0%
GCACTACCTCGCAAATCTGC+AGG + chr3_1:72691210-72691229 Msa0373620:CDS 55.0%
AGAGGAGGAGGAGCCTTCGA+TGG + chr3_1:72687099-72687118 Msa0373620:CDS 60.0%
GTTAGCTGCCGACACACTCC+AGG + chr3_1:72689077-72689096 Msa0373620:intron 60.0%
GCCCTGACTGTTTCCTGACC+TGG - chr3_1:72689098-72689117 None:intergenic 60.0%
CTGCCGACACACTCCAGGTC+AGG + chr3_1:72689082-72689101 Msa0373620:intron 65.0%
CAGCAGGGCGCGAAGCCACA+TGG + chr3_1:72691124-72691143 Msa0373620:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 72686161 72691504 72686161 ID=Msa0373620;Name=Msa0373620
chr3_1 mRNA 72686161 72691504 72686161 ID=Msa0373620-mRNA-1;Parent=Msa0373620;Name=Msa0373620-mRNA-1;_AED=0.02;_eAED=0.02;_QI=393|1|1|1|1|1|2|268|521
chr3_1 exon 72686161 72687762 72686161 ID=Msa0373620-mRNA-1:exon:16368;Parent=Msa0373620-mRNA-1
chr3_1 exon 72690880 72691504 72690880 ID=Msa0373620-mRNA-1:exon:16369;Parent=Msa0373620-mRNA-1
chr3_1 five_prime_UTR 72686161 72686553 72686161 ID=Msa0373620-mRNA-1:five_prime_utr;Parent=Msa0373620-mRNA-1
chr3_1 CDS 72686554 72687762 72686554 ID=Msa0373620-mRNA-1:cds;Parent=Msa0373620-mRNA-1
chr3_1 CDS 72690880 72691236 72690880 ID=Msa0373620-mRNA-1:cds;Parent=Msa0373620-mRNA-1
chr3_1 three_prime_UTR 72691237 72691504 72691237 ID=Msa0373620-mRNA-1:three_prime_utr;Parent=Msa0373620-mRNA-1
Gene Sequence

>Msa0373620

ATGTTCAAAAAGGTATTTGGTAAAATTCCTAAAAAGTCCTCAAAAGGTTCTGAGAATCGTGAACAAGGTGGAAATTCAAGAAGCCATGGTGTTGCAACCTCAAAAAACAGTGATGTTGTTACACAACCTGGGAGTAGCAAAACTGGTAATTCTTCTAATTCTTCTTTGAATGCAGGACAAGGACAGTTTCATAGTCATGGTAACAAATCTTCATTACCTATGAATGAGAATTCCAATGGTAATTTTAATTCTTATGAAGCTTTACCAGCATTTAGGGATGTTCCGAATTCCGAAAAACCGAGCTTGTTTATAAAAAAGCTTAAGATGTGTAGTGTTGTTTTTGACTTCACTGACCCTACTAAGCATCTTAAGGAAAAGGAGATTAAGAGACAAGCTTTGGTTGAGCTTGTTGATTATGTGTCTTCTGTTAATGCTAAATTTACTGAGAATGTAATGCAAGAGGTTGTTAAGATGGTGTCTGTAAATATATTCAGAACACTAAGTCCTCAACCGCGTGAGAATAAGCTCATTGATGGCGTTGAATTAGAGGAGGAGGAGCCTTCGATGGATCCTTCTTGGCCTCATTTGCAAATTGTTTATGAGCTTTTTCTTAGATTTGTTGCATCACCTGAGCTGGATGCAAAGTTAGCTAAGAGATTCATTGATCAATCGTTTATTTTGAGGCTGCTTGATTTGTTTGACTCCGAAGATCCTAGAGAAAGAGAGTATTTGAAAATGTCTTTGCATCGGATCTATGGCAAGTTAATGGCGCATCGACCTTTCATCAGGAAATCAATCAATAACATCTTTTTGAACTTTGTTTTTGAGACTGAGAAGCATAATGGAATTGCTGAGTTTTTGGAAATTTTGGGGAGTATCATTAATGGTTTTGCATTGCCATTGAAAGAAGAGCATAAATTGTTTCTGGTTCGAATATTGATTCCGTTGCACAAACCAAAGTGCTTAGCAATGTATCATCAGCAGTTATCTTATTGCATTACTCAGTTTGTGGAGAAAGACTGCAAACTTGCTGATACAATCATAAGGGGGTTATTGAAGTACTGGCCGATAACAAATAGTTCAAAGGAAGTTATGTTCCTAGGTGAGTTGGAAGAAGTCTTGGAAGCAACTCAACCTCCAGAATTCCAGCGATGTATGGTGCTATTGTTTCGCCGTGTTTCTCATTGTTTGAATAGCCCCCATTTTCAGGTGGCGGAAAGAGCTTTGTTCTTGTGGAATAACGACCACATCGTGAACTTAATCAAACAAAACTGCAAAGTGATACTTCCCATCATCTTTCCCGCGTTGGAGAGAAATACAAAAACTCATTGGAATCAAGCTGTCCATAGTTTGACTTTAAATGTTCAGAAGATTTTTCACGATCTCGATCTCGATCTGTACAAAGAATGTTTACAAAAGTTTGAGCAAGACGAATCAAAGGAAGGTGAAGTGACAGCAGGGCGCGAAGCCACATGGAAACGCTTGGAGGAGGTTGCCGCAAAGAAAGCTGCAAGTAACGAAGCTGTGCTTATTAGTAAAGCACTACCTCGCAAATCTGCAGGTTAG
Protein sequence

>Msa0373620

MFKKVFGKIPKKSSKGSENREQGGNSRSHGVATSKNSDVVTQPGSSKTGNSSNSSLNAGQGQFHSHGNKSSLPMNENSNGNFNSYEALPAFRDVPNSEKPSLFIKKLKMCSVVFDFTDPTKHLKEKEIKRQALVELVDYVSSVNAKFTENVMQEVVKMVSVNIFRTLSPQPRENKLIDGVELEEEEPSMDPSWPHLQIVYELFLRFVASPELDAKLAKRFIDQSFILRLLDLFDSEDPREREYLKMSLHRIYGKLMAHRPFIRKSINNIFLNFVFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMVLLFRRVSHCLNSPHFQVAERALFLWNNDHIVNLIKQNCKVILPIIFPALERNTKTHWNQAVHSLTLNVQKIFHDLDLDLYKECLQKFEQDESKEGEVTAGREATWKRLEEVAAKKAASNEAVLISKALPRKSAG*