AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1334400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1334400 MtrunA17_Chr4g0070551 98.876 623 7 0 4 626 1 623 0.0 1293
Msa1334400 MtrunA17_Chr4g0008451 49.363 628 290 7 4 620 11 621 0.0 624
Msa1334400 MtrunA17_Chr5g0436321 54.167 456 171 2 204 621 96 551 0.0 543
Msa1334400 MtrunA17_Chr3g0129981 47.454 432 214 6 202 623 86 514 1.12e-137 412
Msa1334400 MtrunA17_Chr5g0426591 47.706 436 206 8 204 623 85 514 6.33e-137 410
Msa1334400 MtrunA17_Chr4g0042711 48.232 396 198 5 231 621 97 490 3.42e-134 402
Msa1334400 MtrunA17_Chr5g0417871 48.241 398 199 5 231 623 85 480 6.94e-134 401
Msa1334400 MtrunA17_Chr3g0132371 47.073 427 213 6 204 620 115 538 6.92e-133 400
Msa1334400 MtrunA17_Chr4g0061781 49.367 395 185 6 230 614 115 504 1.43e-130 393
Msa1334400 MtrunA17_Chr2g0307971 49.235 392 190 5 230 614 114 503 1.45e-130 393
Msa1334400 MtrunA17_Chr6g0455571 48.724 392 192 5 230 614 114 503 3.23e-130 392
Msa1334400 MtrunA17_Chr4g0056061 38.876 427 237 11 204 621 79 490 6.37e-92 294
Msa1334400 MtrunA17_Chr5g0399311 38.813 438 234 11 198 621 89 506 2.37e-91 292
Msa1334400 MtrunA17_Chr3g0143821 39.059 425 239 11 204 621 82 493 1.21e-88 286
Msa1334400 MtrunA17_Chr3g0123521 36.384 448 248 12 198 620 112 547 2.00e-88 285
Msa1334400 MtrunA17_Chr1g0204121 39.310 435 229 11 204 622 61 476 3.41e-88 283
Msa1334400 MtrunA17_Chr5g0448581 37.875 433 240 10 204 625 90 504 1.83e-87 283
Msa1334400 MtrunA17_Chr3g0087291 36.706 425 253 7 203 620 141 556 7.12e-87 281
Msa1334400 MtrunA17_Chr1g0160781 36.626 486 266 16 158 620 80 546 7.01e-86 278
Msa1334400 MtrunA17_Chr4g0043911 37.029 451 246 14 197 625 118 552 1.57e-84 275
Msa1334400 MtrunA17_Chr4g0010511 36.279 430 254 8 200 620 198 616 4.33e-81 268
Msa1334400 MtrunA17_Chr3g0077321 36.425 442 242 12 199 621 124 545 1.63e-79 262
Msa1334400 MtrunA17_Chr5g0412251 34.632 462 249 11 199 621 55 502 7.19e-79 258
Msa1334400 MtrunA17_Chr3g0132951 35.000 460 246 12 202 622 72 517 2.17e-76 252
Msa1334400 MtrunA17_Chr1g0204141 37.358 439 235 13 204 622 61 479 4.99e-76 251
Msa1334400 MtrunA17_Chr5g0424241 36.879 423 237 12 219 620 146 559 1.02e-72 244
Msa1334400 MtrunA17_Chr4g0003561 33.958 427 247 12 202 623 45 441 3.12e-64 218
Msa1334400 MtrunA17_Chr2g0284071 32.118 439 240 10 230 621 214 641 1.07e-62 219
Msa1334400 MtrunA17_Chr4g0075311 29.574 470 267 12 204 622 137 593 1.71e-54 195
Msa1334400 MtrunA17_Chr1g0146501 30.675 326 209 6 200 508 58 383 4.79e-38 149
Msa1334400 MtrunA17_Chr7g0220381 31.757 296 184 7 229 507 96 390 6.33e-37 146
Msa1334400 MtrunA17_Chr3g0127811 31.104 299 169 7 230 508 62 343 1.50e-35 140
Msa1334400 MtrunA17_Chr7g0240241 46.032 126 63 2 388 508 1 126 2.56e-28 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1334400 AT5G35570.1 70.047 641 152 7 13 621 9 641 0.0 901
Msa1334400 AT2G37980.1 66.187 417 141 0 204 620 199 615 0.0 618
Msa1334400 AT3G54100.1 51.180 551 247 5 78 620 75 611 0.0 597
Msa1334400 AT5G01100.1 61.593 427 160 2 199 622 185 610 0.0 582
Msa1334400 AT1G14020.1 50.505 396 189 5 231 621 91 484 4.20e-139 415
Msa1334400 AT5G15740.1 50.513 390 184 5 232 614 107 494 1.80e-133 401
Msa1334400 AT2G03280.1 48.974 390 192 5 231 614 88 476 6.43e-130 390
Msa1334400 AT1G22460.1 44.907 432 227 6 204 626 134 563 1.26e-128 390
Msa1334400 AT3G02250.1 48.724 392 192 5 230 614 105 494 5.59e-128 387
Msa1334400 AT5G64600.1 44.780 431 225 6 203 623 90 517 1.05e-125 381
Msa1334400 AT2G03280.2 45.803 417 192 6 231 614 88 503 9.70e-124 376
Msa1334400 AT5G63390.1 38.009 442 257 8 193 626 122 554 3.91e-93 298
Msa1334400 AT1G20550.1 37.923 443 244 12 189 621 69 490 1.81e-88 286
Msa1334400 AT3G26370.1 37.621 412 227 9 230 622 157 557 8.89e-88 284
Msa1334400 AT1G76270.1 38.283 431 237 12 202 621 75 487 2.51e-87 283
Msa1334400 AT4G16650.2 40.421 428 229 12 204 621 93 504 3.10e-87 282
Msa1334400 AT4G16650.1 40.421 428 229 12 204 621 93 504 3.10e-87 282
Msa1334400 AT4G38390.1 37.241 435 248 10 202 626 92 511 1.99e-86 280
Msa1334400 AT1G04910.1 36.703 455 246 12 177 621 53 475 4.31e-85 276
Msa1334400 AT2G44500.1 37.011 435 253 10 202 626 144 567 7.08e-84 274
Msa1334400 AT1G35510.1 33.929 560 317 15 82 621 31 557 2.67e-83 273
Msa1334400 AT1G14970.2 35.714 448 254 12 198 625 4 437 3.14e-82 266
Msa1334400 AT1G14970.3 37.440 414 229 10 231 625 9 411 3.64e-82 265
Msa1334400 AT3G07900.1 34.182 550 297 19 108 620 51 572 4.00e-82 270
Msa1334400 AT5G65470.1 35.637 463 243 13 199 620 54 502 1.92e-81 266
Msa1334400 AT4G24530.1 35.217 460 247 11 201 622 72 518 3.36e-81 266
Msa1334400 AT1G38065.2 36.721 433 243 13 209 620 6 428 2.65e-80 261
Msa1334400 AT1G14970.1 35.892 443 250 12 203 625 129 557 2.97e-80 264
Msa1334400 AT1G38065.1 37.046 413 231 11 229 620 34 438 3.30e-80 261
Msa1334400 AT1G38131.1 35.892 482 259 17 173 620 92 557 5.11e-79 262
Msa1334400 AT2G01480.1 37.108 415 231 10 230 625 153 556 2.84e-78 259
Msa1334400 AT2G01480.2 39.394 363 198 8 230 573 153 512 1.55e-73 246
Msa1334400 AT1G29200.4 32.692 468 252 13 200 621 44 494 2.41e-63 218
Msa1334400 AT1G29200.1 32.692 468 252 13 200 621 44 494 2.41e-63 218
Msa1334400 AT1G29200.2 32.692 468 252 13 200 621 160 610 2.50e-62 218
Msa1334400 AT1G62330.1 30.480 479 264 13 196 620 186 649 8.10e-62 217
Msa1334400 AT1G11990.1 32.579 442 257 13 204 620 163 588 2.08e-60 212
Msa1334400 AT1G52630.1 35.027 374 229 10 203 573 45 407 1.60e-59 206
Msa1334400 AT1G29200.3 32.870 432 232 11 236 621 1 420 4.23e-58 201
Msa1334400 AT1G11990.2 29.352 494 271 14 189 620 133 610 9.77e-54 194
Msa1334400 AT2G44500.2 39.098 266 149 7 202 458 144 405 6.82e-50 179
Msa1334400 AT1G52630.2 33.939 330 205 9 246 573 1 319 7.39e-50 177
Msa1334400 AT3G26370.2 40.367 218 118 3 230 437 157 372 4.40e-48 173
Msa1334400 AT3G30300.2 31.864 295 185 7 229 507 98 392 4.29e-38 150
Msa1334400 AT3G30300.1 31.864 295 185 7 229 507 98 392 4.29e-38 150
Msa1334400 AT3G03810.2 29.394 330 216 6 196 508 53 382 3.38e-37 147
Msa1334400 AT3G03810.1 29.394 330 216 6 196 508 53 382 3.38e-37 147

Find 176 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATCTTGCCCTTCATTTA+AGG 0.061402 8_4:+54827285 Msa1334400:CDS
CTTAGTTTCTGTATGGATTT+TGG 0.094858 8_4:-54827170 None:intergenic
GAATCCATTGCTGTAGATTT+TGG 0.128439 8_4:+54824303 Msa1334400:CDS
TTGTGGGGTTTGTTTGTTTA+TGG 0.153331 8_4:+54824371 Msa1334400:CDS
TCAGCTCCAGTTGAAGAATT+TGG 0.157549 8_4:+54827224 Msa1334400:CDS
ATATATTTGTAGTGGCTTTA+AGG 0.177091 8_4:+54826695 Msa1334400:intron
AGAATGACGTTTGTTTAATA+AGG 0.225627 8_4:-54828553 None:intergenic
AGATCACTTTGTGCTGATTT+AGG 0.226086 8_4:-54827106 None:intergenic
TAGACAGTGGTAAAATAATT+AGG 0.232429 8_4:-54823779 None:intergenic
GCTTCACAGCTCTCGTTCTT+AGG 0.250246 8_4:+54828258 Msa1334400:three_prime_UTR
TGTGGGGTTTGTTTGTTTAT+GGG 0.262109 8_4:+54824372 Msa1334400:CDS
TTACCAGATAATCCAGCTTT+TGG 0.268474 8_4:-54828380 None:intergenic
TATCCAAAAGCTGGATTATC+TGG 0.271228 8_4:+54828377 Msa1334400:three_prime_UTR
GAAGTTTCCCTCGGAGTTAA+TGG 0.272926 8_4:-54827581 None:intergenic
CTCTAACACTTCTTCCGATC+TGG 0.279645 8_4:-54824190 None:intergenic
TTACACTTACGATGGAAATA+TGG 0.280890 8_4:+54827826 Msa1334400:CDS
TTATTACTTGTCTGGATTGA+TGG 0.287803 8_4:-54827894 None:intergenic
AAAGATATGCTTGCATTTAC+TGG 0.303129 8_4:+54827440 Msa1334400:CDS
GCCTAAATCAGATGAGATTT+GGG 0.307013 8_4:+54826072 Msa1334400:CDS
GTTACCTTGGACCAAGATAT+TGG 0.310172 8_4:-54826822 None:intergenic
TAAAAGCTTTCTTCTAGCTT+TGG 0.313521 8_4:-54828176 None:intergenic
CCCAACATCCAAGCAATATA+TGG 0.320169 8_4:-54828413 None:intergenic
TATATTCTTGTAAATGCTAA+TGG 0.320383 8_4:+54826047 Msa1334400:CDS
GGCCTAAATCAGATGAGATT+TGG 0.323892 8_4:+54826071 Msa1334400:CDS
TGGACGAAGGAAACATTTCT+TGG 0.328674 8_4:+54828075 Msa1334400:CDS
ATGCATAACCAAGGGATCTT+TGG 0.337730 8_4:-54825641 None:intergenic
TTATGAATTTATTACTTGTC+TGG 0.340259 8_4:-54827902 None:intergenic
AGAACCTCTGTCTTGTAATA+AGG 0.342668 8_4:-54827077 None:intergenic
TTCTCTATCAAATGATTGTA+AGG 0.344004 8_4:-54823885 None:intergenic
GCTCACGACGGCGGCGCCGC+TGG 0.353800 8_4:-54824118 None:intergenic
CCCCAAATCTCATCTGATTT+AGG 0.364358 8_4:-54826073 None:intergenic
CATGTTTCTCAGAGAGTTCA+TGG 0.366893 8_4:+54824246 Msa1334400:CDS
ATATTCTTGTAAATGCTAAT+GGG 0.370728 8_4:+54826048 Msa1334400:CDS
TTGTTTCCAAATTCTTCAAC+TGG 0.375807 8_4:-54827230 None:intergenic
CTCTTGATCATACCTCGTAC+TGG 0.377344 8_4:+54826234 Msa1334400:CDS
GTTCTTAAGATTTGTGCTAC+TGG 0.378409 8_4:+54824396 Msa1334400:CDS
GCTGGCGTTGTTGCGTTTGA+AGG 0.378895 8_4:-54824100 None:intergenic
CCATATATTGCTTGGATGTT+GGG 0.380145 8_4:+54828413 Msa1334400:three_prime_UTR
ATTTCACTCATACTGATTCC+CGG 0.381505 8_4:+54827129 Msa1334400:CDS
ACAGAATAATTAATACTCTA+TGG 0.386705 8_4:-54823949 None:intergenic
ATTTGTGCTACTGGTTGGCT+TGG 0.404875 8_4:+54824405 Msa1334400:CDS
ACGGCATCTTAGTTTCTGTA+TGG 0.405367 8_4:-54827177 None:intergenic
GATCCCTTGGTTATGCATAT+AGG 0.412263 8_4:+54825646 Msa1334400:CDS
TTGATGCCAGATATGTGATA+TGG 0.414143 8_4:+54826169 Msa1334400:intron
GATGTATTTGTGAAACAAAA+AGG 0.414230 8_4:+54828216 Msa1334400:CDS
TGAAGAATTTGGAAACAAAC+TGG 0.414484 8_4:+54827235 Msa1334400:CDS
GAGGAATGAGAGAAAATGTT+GGG 0.415495 8_4:-54827707 None:intergenic
CAAAGGCTGTACAAGGTCAT+AGG 0.418033 8_4:+54827849 Msa1334400:CDS
TCTCCCGACTCTCTTAGATA+TGG 0.420573 8_4:-54828149 None:intergenic
AGCGGCGCCGCCGTCGTGAG+CGG 0.421522 8_4:+54824120 Msa1334400:CDS
TTTAGTTTCTTATCAAATCA+TGG 0.422247 8_4:-54828452 None:intergenic
GGCGCCGCCGTCGTGAGCGG+CGG 0.429371 8_4:+54824123 Msa1334400:CDS
TACCATTGCCATATATTGCT+TGG 0.430384 8_4:+54828405 Msa1334400:three_prime_UTR
GACGTTTGTTTAATAAGGTA+TGG 0.432139 8_4:-54828548 None:intergenic
CTTAAATGAAGGGCAAGATA+AGG 0.435686 8_4:-54827284 None:intergenic
TTATAAAAGCTGCAATCATA+TGG 0.438826 8_4:+54828287 Msa1334400:three_prime_UTR
TGATGACCATGCTTCGAAAC+AGG 0.444891 8_4:-54824213 None:intergenic
CAATATGATTATCCAAAAGC+TGG 0.446387 8_4:+54828368 Msa1334400:three_prime_UTR
TTATTCAGGAATCAGAAGTC+TGG 0.451320 8_4:+54825846 Msa1334400:intron
ATCTCTTGAAGAAAGAATTA+CGG 0.452047 8_4:-54828343 None:intergenic
ACTCTAAAGACGGTAGAAAC+AGG 0.453735 8_4:+54825693 Msa1334400:CDS
AGTTCATGGTGGAGTTGTGA+AGG 0.456224 8_4:+54824260 Msa1334400:CDS
GCCATATATTGCTTGGATGT+TGG 0.459418 8_4:+54828412 Msa1334400:three_prime_UTR
GTGGTAATGTCTCTACTATA+TGG 0.459710 8_4:-54826764 None:intergenic
TTAAGATTTGTGCTACTGGT+TGG 0.473916 8_4:+54824400 Msa1334400:CDS
ACCAAGTGCTCTAAGTAGTA+AGG 0.476802 8_4:-54827603 None:intergenic
ATTGCGTGTATAGTATACTT+TGG 0.478202 8_4:-54828513 None:intergenic
AGAGGAATGAGAGAAAATGT+TGG 0.478418 8_4:-54827708 None:intergenic
ATTTAGATTATCAATTCCAT+TGG 0.478712 8_4:-54825610 None:intergenic
TGCGCCGCCGCTCACGACGG+CGG 0.479810 8_4:-54824127 None:intergenic
GTTTATATAGTCTTTGTTGA+GGG 0.480225 8_4:-54823863 None:intergenic
TCTAACACTTCTTCCGATCT+GGG 0.482101 8_4:-54824189 None:intergenic
TCCTTACTACTTAGAGCACT+TGG 0.482113 8_4:+54827602 Msa1334400:CDS
TTCTAGAGAGATCGATACAT+TGG 0.484943 8_4:-54825895 None:intergenic
GTCAACAGTCCACGTTTCTC+CGG 0.492159 8_4:+54824054 Msa1334400:CDS
ACCAGGATTTACCTCGTAGC+TGG 0.496065 8_4:+54827638 Msa1334400:CDS
ATCATATGGCATTGTGGCTG+TGG 0.499129 8_4:+54828301 Msa1334400:three_prime_UTR
GACTGAGCACGGCGAGTCAT+CGG 0.499416 8_4:-54824078 None:intergenic
CACTTTGTGCTGATTTAGGA+GGG 0.499730 8_4:-54827102 None:intergenic
AATGCCATTGTTAGCAAGCC+GGG 0.500019 8_4:-54827147 None:intergenic
ATGTAACTTACCTTAAATGA+AGG 0.501429 8_4:-54827295 None:intergenic
AATCATCAAAACATGTTGGC+TGG 0.502313 8_4:+54827764 Msa1334400:CDS
TGTTAAACTTGTTGATCAGT+TGG 0.504716 8_4:+54828055 Msa1334400:CDS
CTCGTAGCTGGAGAAGCATA+TGG 0.507275 8_4:+54827650 Msa1334400:CDS
TCCAGCTACGAGGTAAATCC+TGG 0.509294 8_4:-54827639 None:intergenic
GCTGGAGAAGCATATGGAAG+AGG 0.516557 8_4:+54827656 Msa1334400:CDS
GCTCCATATCTAAGAGAGTC+GGG 0.517325 8_4:+54828146 Msa1334400:CDS
ACATTACCACCTACCTATGC+TGG 0.518139 8_4:+54826777 Msa1334400:CDS
TCTAGAGAGATCGATACATT+GGG 0.518334 8_4:-54825894 None:intergenic
TTAGAGCCTGTTTCGAAGCA+TGG 0.520711 8_4:+54824207 Msa1334400:CDS
AGTATTGAATAAAATAATCA+AGG 0.521190 8_4:-54828612 None:intergenic
GCTTTAAGGATTTGTTTGAC+TGG 0.524080 8_4:+54826709 Msa1334400:CDS
TGCGATATGAAGTTGGTCAC+TGG 0.528729 8_4:+54827510 Msa1334400:CDS
GAATGCCATTGTTAGCAAGC+CGG 0.531220 8_4:-54827148 None:intergenic
CAAGAATCATCAAAACATGT+TGG 0.532621 8_4:+54827760 Msa1334400:CDS
TCACTTTGTGCTGATTTAGG+AGG 0.533556 8_4:-54827103 None:intergenic
CTAGTGGACCAAAGATCCCT+TGG 0.537712 8_4:+54825633 Msa1334400:CDS
AAGAGATTAATGGGACTGAA+AGG 0.537759 8_4:+54827540 Msa1334400:CDS
AAATCCAAAATCTACAGCAA+TGG 0.538935 8_4:-54824307 None:intergenic
AAGAAATACGTCACTCTGAA+GGG 0.538954 8_4:-54827804 None:intergenic
AAGTTGTATTCTTTATTGCA+CGG 0.542645 8_4:+54828670 Msa1334400:three_prime_UTR
TTTAGAGATCAAGTTTGGGC+TGG 0.544091 8_4:+54828490 Msa1334400:three_prime_UTR
AAATAAGAAGAACTAGCAGT+TGG 0.544793 8_4:+54823801 Msa1334400:five_prime_UTR
TTTGTTTCACAAATACATCC+TGG 0.544979 8_4:-54828212 None:intergenic
TCTTGATCATACCTCGTACT+GGG 0.547240 8_4:+54826235 Msa1334400:CDS
GTTCATGGTGGAGTTGTGAA+GGG 0.550601 8_4:+54824261 Msa1334400:CDS
AAAAGCTGGATTATCTGGTA+AGG 0.552860 8_4:+54828382 Msa1334400:three_prime_UTR
TATTCTTGTAAATGCTAATG+GGG 0.555729 8_4:+54826049 Msa1334400:CDS
AAAGAAATACGTCACTCTGA+AGG 0.556265 8_4:-54827805 None:intergenic
GAGTGCGCCGCCGCTCACGA+CGG 0.556672 8_4:-54824130 None:intergenic
GACTCGCTGTGAAACTCCAT+CGG 0.558940 8_4:-54824034 None:intergenic
AGGCAGATGCGATATGAAGT+TGG 0.559121 8_4:+54827503 Msa1334400:CDS
AACTCCAATATCTTGGTCCA+AGG 0.559526 8_4:+54826818 Msa1334400:CDS
GGTTTATATAGTCTTTGTTG+AGG 0.565397 8_4:-54823864 None:intergenic
AATTGATAATCTAAATCTAG+TGG 0.566115 8_4:+54825617 Msa1334400:CDS
TGCGTTTGAAGGACTGAGCA+CGG 0.566234 8_4:-54824089 None:intergenic
GCAAATCAACTCACCCAGAT+CGG 0.567377 8_4:+54824176 Msa1334400:CDS
GTATCTAGAATGCAGCAGAA+TGG 0.567600 8_4:+54827257 Msa1334400:CDS
TTCTCTGAATCAAATTCCGA+TGG 0.568476 8_4:+54824018 Msa1334400:CDS
GTATTTCTTTACACTTACGA+TGG 0.568480 8_4:+54827818 Msa1334400:CDS
AATATGGCAAAGGCTGTACA+AGG 0.568533 8_4:+54827842 Msa1334400:CDS
TGTAACTTACCTTAAATGAA+GGG 0.580244 8_4:-54827294 None:intergenic
AGGTAAATCCTGGTGTGTGA+TGG 0.580546 8_4:-54827629 None:intergenic
TGCTCCATATCTAAGAGAGT+CGG 0.582757 8_4:+54828145 Msa1334400:CDS
ACTGAAAGGAGATTGCTTGG+TGG 0.582839 8_4:+54827554 Msa1334400:CDS
GGGACTGAAAGGAGATTGCT+TGG 0.582857 8_4:+54827551 Msa1334400:CDS
TGCTGTTGCTAAGATTATGA+AGG 0.586237 8_4:+54826193 Msa1334400:CDS
CAGGAACTATCTGACTCCAA+TGG 0.586261 8_4:+54825594 Msa1334400:intron
CCTCGTACTGGGCTGATCAG+AGG 0.593327 8_4:+54826246 Msa1334400:CDS
TCACAAATACATCCTGGCAG+AGG 0.595231 8_4:-54828206 None:intergenic
ACGGTAGAAACAGGAGTAGG+TGG 0.604533 8_4:+54825702 Msa1334400:CDS
AGTTCTTCTTATTTAGACAG+TGG 0.605728 8_4:-54823792 None:intergenic
CTTGTTGATCAGTTGGACGA+AGG 0.609235 8_4:+54828062 Msa1334400:CDS
TATGCATATAGGAGTCAAGA+AGG 0.609346 8_4:+54825657 Msa1334400:CDS
ATTTACAAGAATATATCCGT+TGG 0.609999 8_4:-54826039 None:intergenic
ATCCAAGCAATATATGGCAA+TGG 0.610112 8_4:-54828407 None:intergenic
GAGTTCTCACTTTAGCAGTG+TGG 0.611281 8_4:-54825728 None:intergenic
TACGAGGTATGATCAAGAGA+AGG 0.612224 8_4:-54826230 None:intergenic
GAACGGCTGAATTCCAGCAT+AGG 0.612438 8_4:-54826790 None:intergenic
TAGGAGTCAAGAAGGAGATG+TGG 0.612654 8_4:+54825665 Msa1334400:CDS
CATGAACTCTCTGAGAAACA+TGG 0.613005 8_4:-54824245 None:intergenic
ATATGAAGTTGGTCACTGGA+AGG 0.616768 8_4:+54827514 Msa1334400:CDS
AAAATTAAATAATGATCACA+AGG 0.617086 8_4:-54828810 None:intergenic
AGGAATGAGAGAAAATGTTG+GGG 0.617224 8_4:-54827706 None:intergenic
TTCAAACGCAACAACGCCAG+CGG 0.618988 8_4:+54824102 Msa1334400:CDS
AGTAGTAAGGAAGTTTCCCT+CGG 0.625299 8_4:-54827590 None:intergenic
TGGCTGTCCATTAACTCCGA+GGG 0.625425 8_4:+54827574 Msa1334400:CDS
TTAGATATGGAGCACCGTCA+CGG 0.628621 8_4:-54828136 None:intergenic
GACTCCTATATGCATAACCA+AGG 0.629127 8_4:-54825650 None:intergenic
ACTTTGTGCTGATTTAGGAG+GGG 0.633477 8_4:-54827101 None:intergenic
GATTCCCGGCTTGCTAACAA+TGG 0.643017 8_4:+54827143 Msa1334400:CDS
TCTACAGCAATGGATTCAAG+TGG 0.648308 8_4:-54824297 None:intergenic
TCAATGCTCTGTAGTTTACA+CGG 0.649185 8_4:-54827196 None:intergenic
AGCACGGCGAGTCATCGGAC+CGG 0.656467 8_4:-54824073 None:intergenic
GGTTCCTTATTACAAGACAG+AGG 0.658750 8_4:+54827073 Msa1334400:intron
CTCATCTTCAGAAGACAGAG+AGG 0.659368 8_4:-54827726 None:intergenic
GTCATCGGACCGGAGAAACG+TGG 0.662543 8_4:-54824063 None:intergenic
CCTCTGATCAGCCCAGTACG+AGG 0.668444 8_4:-54826246 None:intergenic
AAATTAAATAATGATCACAA+GGG 0.668446 8_4:-54828809 None:intergenic
TGAATTCCAGCATAGGTAGG+TGG 0.669854 8_4:-54826783 None:intergenic
ACTCCTATATGCATAACCAA+GGG 0.670117 8_4:-54825649 None:intergenic
TTACGATGGAAATATGGCAA+AGG 0.670267 8_4:+54827832 Msa1334400:CDS
GTGCTAGATGCAAAGACCAA+CGG 0.675801 8_4:+54826023 Msa1334400:intron
GTGGCTGTCCATTAACTCCG+AGG 0.677303 8_4:+54827573 Msa1334400:CDS
AAGACGGTAGAAACAGGAGT+AGG 0.677819 8_4:+54825699 Msa1334400:CDS
AGGAAGTATGAAATATCTCG+AGG 0.678236 8_4:+54827676 Msa1334400:CDS
GGCTGAATTCCAGCATAGGT+AGG 0.679350 8_4:-54826786 None:intergenic
ATTCTTGTAAATGCTAATGG+GGG 0.683438 8_4:+54826050 Msa1334400:CDS
TGTGGAACGAACTCTAAAGA+CGG 0.684864 8_4:+54825683 Msa1334400:CDS
CAGAAGAAGATGAAGAACTG+AGG 0.686563 8_4:+54827483 Msa1334400:CDS
GCTGCAATCATATGGCATTG+TGG 0.700290 8_4:+54828295 Msa1334400:three_prime_UTR
TGTTGGGATAAGATTGCAAG+TGG 0.704812 8_4:+54828429 Msa1334400:three_prime_UTR
CCTAAATCAGATGAGATTTG+GGG 0.710208 8_4:+54826073 Msa1334400:CDS
CATATGCTTCTCCAGCTACG+AGG 0.722282 8_4:-54827649 None:intergenic
AAACTTCATAGAGACCGTGA+CGG 0.726293 8_4:+54828122 Msa1334400:CDS
GTTTCTCAGAGAGTTCATGG+TGG 0.759850 8_4:+54824249 Msa1334400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTATTTTACTTTTTATC+AGG + chr8_4:54825575-54825594 Msa1334400:intron 10.0%
!!! TTGTTTTAATATCAAAAAAA+GGG + chr8_4:54828634-54828653 Msa1334400:three_prime_UTR 10.0%
!! AGTAAAATAATTTACTTAGT+AGG - chr8_4:54825568-54825587 None:intergenic 15.0%
!!! AATTTGAAACATTGTTAAAA+GGG - chr8_4:54827022-54827041 None:intergenic 15.0%
!!! TAATTTGAAACATTGTTAAA+AGG - chr8_4:54827023-54827042 None:intergenic 15.0%
!! TTTAACAATGTTTCAAATTA+CGG + chr8_4:54827023-54827042 Msa1334400:intron 15.0%
!! AATTTATAGTGTTTATTTAC+AGG + chr8_4:54827052-54827071 Msa1334400:intron 15.0%
!!! AGTATTGAATAAAATAATCA+AGG - chr8_4:54828615-54828634 None:intergenic 15.0%
!!! CTTGTTTTAATATCAAAAAA+AGG + chr8_4:54828633-54828652 Msa1334400:three_prime_UTR 15.0%
!!! TGTTTTAATATCAAAAAAAG+GGG + chr8_4:54828635-54828654 Msa1334400:three_prime_UTR 15.0%
!! ACAGAATAATTAATACTCTA+TGG - chr8_4:54823952-54823971 None:intergenic 20.0%
!!! AAGAGTTCTGTTTTTTTTTT+TGG + chr8_4:54824544-54824563 Msa1334400:intron 20.0%
!!! GTTTTTGTTTTTGGATTTTA+TGG + chr8_4:54824654-54824673 Msa1334400:intron 20.0%
!! AATATTTAAGCACTTCAAAA+TGG - chr8_4:54824702-54824721 None:intergenic 20.0%
!! ATAACTAATAAGATAGCTAT+GGG - chr8_4:54824986-54825005 None:intergenic 20.0%
!! TATAACTAATAAGATAGCTA+TGG - chr8_4:54824987-54825006 None:intergenic 20.0%
!! AGCTATCTTATTAGTTATAA+TGG + chr8_4:54824988-54825007 Msa1334400:intron 20.0%
!! GCTATCTTATTAGTTATAAT+GGG + chr8_4:54824989-54825008 Msa1334400:intron 20.0%
!! CTATCTTATTAGTTATAATG+GGG + chr8_4:54824990-54825009 Msa1334400:intron 20.0%
!! AGAATTAGATAGATCATTAT+CGG + chr8_4:54825132-54825151 Msa1334400:intron 20.0%
!! ATTTAGATTATCAATTCCAT+TGG - chr8_4:54825613-54825632 None:intergenic 20.0%
!!! AATTGATAATCTAAATCTAG+TGG + chr8_4:54825617-54825636 Msa1334400:CDS 20.0%
!! AAAAAATTATTGAAAGTGAG+TGG - chr8_4:54825998-54826017 None:intergenic 20.0%
!! TATATTCTTGTAAATGCTAA+TGG + chr8_4:54826047-54826066 Msa1334400:CDS 20.0%
!! ATATTCTTGTAAATGCTAAT+GGG + chr8_4:54826048-54826067 Msa1334400:CDS 20.0%
!! TCTGATGTTATATTATAAGA+AGG + chr8_4:54826111-54826130 Msa1334400:intron 20.0%
!! AAATCTTGTATCAACTAATA+TGG - chr8_4:54826377-54826396 None:intergenic 20.0%
!! TTGTTTCAATATATTTGTAG+TGG + chr8_4:54826687-54826706 Msa1334400:intron 20.0%
!! TTATGAATTTATTACTTGTC+TGG - chr8_4:54827905-54827924 None:intergenic 20.0%
!!! TTTAGTTTCTTATCAAATCA+TGG - chr8_4:54828455-54828474 None:intergenic 20.0%
!!! CTAACTACACTTTTTAAATA+AGG + chr8_4:54828574-54828593 Msa1334400:three_prime_UTR 20.0%
!!! GTTTTAATATCAAAAAAAGG+GGG + chr8_4:54828636-54828655 Msa1334400:three_prime_UTR 20.0%
! TAGACAGTGGTAAAATAATT+AGG - chr8_4:54823782-54823801 None:intergenic 25.0%
! GTTTATATAGTCTTTGTTGA+GGG - chr8_4:54823866-54823885 None:intergenic 25.0%
! TTCTCTATCAAATGATTGTA+AGG - chr8_4:54823888-54823907 None:intergenic 25.0%
!!! ATAAGATTGAGCTTTTTCAA+TGG - chr8_4:54824436-54824455 None:intergenic 25.0%
!!! TTTTTTTGGTAATTAGTGTG+TGG + chr8_4:54824558-54824577 Msa1334400:intron 25.0%
!!! AAGTTTGCTGTTTTTGTTTT+TGG + chr8_4:54824645-54824664 Msa1334400:intron 25.0%
!! TTTTGGATTTTATGGTGTTT+TGG + chr8_4:54824662-54824681 Msa1334400:intron 25.0%
!! TAAATGGTATGTTCACATTT+TGG - chr8_4:54825088-54825107 None:intergenic 25.0%
! GTATATCCAAACAAACATTA+AGG - chr8_4:54825179-54825198 None:intergenic 25.0%
! ATTGAAAATACGAAAACACT+TGG - chr8_4:54825354-54825373 None:intergenic 25.0%
!!! CATTTGGAATTTTCACAATT+TGG - chr8_4:54825416-54825435 None:intergenic 25.0%
! CAAATTGTGAAAATTCCAAA+TGG + chr8_4:54825414-54825433 Msa1334400:intron 25.0%
! AAACAAAAGAAAGTAATGCA+AGG - chr8_4:54825509-54825528 None:intergenic 25.0%
!! TTGCATTACTTTCTTTTGTT+TGG + chr8_4:54825508-54825527 Msa1334400:intron 25.0%
!!! TGCATTACTTTCTTTTGTTT+GGG + chr8_4:54825509-54825528 Msa1334400:intron 25.0%
! TAATCTATATCTCAAGTTTG+TGG + chr8_4:54825751-54825770 Msa1334400:intron 25.0%
!!! ATTTGTTTGGTTTTCAATGT+AGG + chr8_4:54825779-54825798 Msa1334400:intron 25.0%
!!! CAAAGTTTGCTTTTTTATTC+AGG + chr8_4:54825832-54825851 Msa1334400:intron 25.0%
! ATTTACAAGAATATATCCGT+TGG - chr8_4:54826042-54826061 None:intergenic 25.0%
! TATTCTTGTAAATGCTAATG+GGG + chr8_4:54826049-54826068 Msa1334400:CDS 25.0%
! ATGTTATATTATAAGAAGGC+AGG + chr8_4:54826115-54826134 Msa1334400:intron 25.0%
! GTCAAAAAAGCTAAATTTCT+AGG - chr8_4:54826469-54826488 None:intergenic 25.0%
!! ATATATTTGTAGTGGCTTTA+AGG + chr8_4:54826695-54826714 Msa1334400:intron 25.0%
!! ATTGAATAAATTTTGAGCAC+AGG - chr8_4:54826853-54826872 None:intergenic 25.0%
! AATGATGTTTATGACACATA+AGG - chr8_4:54826951-54826970 None:intergenic 25.0%
!!! TGTGGAATTTTTTTTGACAT+TGG - chr8_4:54826985-54827004 None:intergenic 25.0%
! TGTAACTTACCTTAAATGAA+GGG - chr8_4:54827297-54827316 None:intergenic 25.0%
! ATGTAACTTACCTTAAATGA+AGG - chr8_4:54827298-54827317 None:intergenic 25.0%
! ATAATACAATTGAATCCACA+TGG + chr8_4:54827331-54827350 Msa1334400:intron 25.0%
!!! ATGTTTTGATGATTCTTGAA+AGG - chr8_4:54827758-54827777 None:intergenic 25.0%
! CATTGAAATCAGTTTATACT+GGG - chr8_4:54828014-54828033 None:intergenic 25.0%
! GATGTATTTGTGAAACAAAA+AGG + chr8_4:54828216-54828235 Msa1334400:CDS 25.0%
! TTATAAAAGCTGCAATCATA+TGG + chr8_4:54828287-54828306 Msa1334400:three_prime_UTR 25.0%
! ATCTCTTGAAGAAAGAATTA+CGG - chr8_4:54828346-54828365 None:intergenic 25.0%
! AGAATGACGTTTGTTTAATA+AGG - chr8_4:54828556-54828575 None:intergenic 25.0%
! AAGTTGTATTCTTTATTGCA+CGG + chr8_4:54828670-54828689 Msa1334400:three_prime_UTR 25.0%
! AGTTCTTCTTATTTAGACAG+TGG - chr8_4:54823795-54823814 None:intergenic 30.0%
AAATAAGAAGAACTAGCAGT+TGG + chr8_4:54823801-54823820 Msa1334400:five_prime_UTR 30.0%
GGTTTATATAGTCTTTGTTG+AGG - chr8_4:54823867-54823886 None:intergenic 30.0%
AAATCCAAAATCTACAGCAA+TGG - chr8_4:54824310-54824329 None:intergenic 30.0%
TTTAGAGAGAAGAAAAAGCT+TGG + chr8_4:54824327-54824346 Msa1334400:CDS 30.0%
TGAAAAAGCTCAATCTTATC+AGG + chr8_4:54824437-54824456 Msa1334400:CDS 30.0%
ATTGTATCTTACACTGCAAA+GGG + chr8_4:54824479-54824498 Msa1334400:intron 30.0%
!!! AAAGGGTCAATTCAGTTTTT+TGG + chr8_4:54824496-54824515 Msa1334400:intron 30.0%
TACAAAGCATGATGTTATAG+TGG - chr8_4:54824610-54824629 None:intergenic 30.0%
CTATAACATCATGCTTTGTA+TGG + chr8_4:54824610-54824629 Msa1334400:intron 30.0%
! TGTTAGTAATTTTTGTTGCG+TGG + chr8_4:54824872-54824891 Msa1334400:intron 30.0%
! ATGCTTTTATGCAATCAACT+AGG + chr8_4:54824901-54824920 Msa1334400:intron 30.0%
TGAACATACCATTTAGTAGT+AGG + chr8_4:54825093-54825112 Msa1334400:intron 30.0%
GAACATACCATTTAGTAGTA+GGG + chr8_4:54825094-54825113 Msa1334400:intron 30.0%
! ACACCATACCAACTTTTATA+TGG + chr8_4:54825316-54825335 Msa1334400:intron 30.0%
TTGTGAAAATTCCAAATGGT+AGG + chr8_4:54825418-54825437 Msa1334400:intron 30.0%
TGTGAAAATTCCAAATGGTA+GGG + chr8_4:54825419-54825438 Msa1334400:intron 30.0%
!! GCATTACTTTCTTTTGTTTG+GGG + chr8_4:54825510-54825529 Msa1334400:intron 30.0%
!! GTTTGTGGACTTAATTTGTT+TGG + chr8_4:54825766-54825785 Msa1334400:intron 30.0%
AATTATTGAAAGTGAGTGGA+GGG - chr8_4:54825994-54826013 None:intergenic 30.0%
AAATTATTGAAAGTGAGTGG+AGG - chr8_4:54825995-54826014 None:intergenic 30.0%
ATTCTTGTAAATGCTAATGG+GGG + chr8_4:54826050-54826069 Msa1334400:CDS 30.0%
TTATATTATAAGAAGGCAGG+CGG + chr8_4:54826118-54826137 Msa1334400:intron 30.0%
CTTTCTTACCTCTTTAGATT+TGG + chr8_4:54826280-54826299 Msa1334400:intron 30.0%
! ACAATCATCCCAACTTTTAA+AGG + chr8_4:54826536-54826555 Msa1334400:intron 30.0%
! CAATCATCCCAACTTTTAAA+GGG + chr8_4:54826537-54826556 Msa1334400:intron 30.0%
! CAATCTTCCCTTTAAAAGTT+GGG - chr8_4:54826547-54826566 None:intergenic 30.0%
GAAAACTAGTTATAGCTTTC+TGG - chr8_4:54826576-54826595 None:intergenic 30.0%
! GCATTTTATTGATACACTGA+AGG + chr8_4:54826734-54826753 Msa1334400:CDS 30.0%
!! GATATTGGAGTTTTTGAGAA+CGG - chr8_4:54826810-54826829 None:intergenic 30.0%
TCTCAAAAACTCCAATATCT+TGG + chr8_4:54826811-54826830 Msa1334400:CDS 30.0%
! TAAATTTTGAGCACAGGTTA+TGG - chr8_4:54826847-54826866 None:intergenic 30.0%
CTATATAAAGACAAGATGGA+TGG - chr8_4:54826904-54826923 None:intergenic 30.0%
! CTTAGTTTCTGTATGGATTT+TGG - chr8_4:54827173-54827192 None:intergenic 30.0%
TTGTTTCCAAATTCTTCAAC+TGG - chr8_4:54827233-54827252 None:intergenic 30.0%
TGAAGAATTTGGAAACAAAC+TGG + chr8_4:54827235-54827254 Msa1334400:CDS 30.0%
GATCTCATTATAAATCCATG+TGG - chr8_4:54827349-54827368 None:intergenic 30.0%
TAGAGTAAGGTGATTAGAAA+TGG - chr8_4:54827396-54827415 None:intergenic 30.0%
AACAAAGAAGAGATAGAGTA+AGG - chr8_4:54827409-54827428 None:intergenic 30.0%
AAAGATATGCTTGCATTTAC+TGG + chr8_4:54827440-54827459 Msa1334400:CDS 30.0%
TGGAAGGAAAAAGAGATTAA+TGG + chr8_4:54827530-54827549 Msa1334400:CDS 30.0%
GGAAGGAAAAAGAGATTAAT+GGG + chr8_4:54827531-54827550 Msa1334400:CDS 30.0%
CAAGAATCATCAAAACATGT+TGG + chr8_4:54827760-54827779 Msa1334400:CDS 30.0%
GTATTTCTTTACACTTACGA+TGG + chr8_4:54827818-54827837 Msa1334400:CDS 30.0%
TTACACTTACGATGGAAATA+TGG + chr8_4:54827826-54827845 Msa1334400:CDS 30.0%
TTATTACTTGTCTGGATTGA+TGG - chr8_4:54827897-54827916 None:intergenic 30.0%
! CTTCTAACATGAAGTTTTTG+CGG + chr8_4:54827943-54827962 Msa1334400:intron 30.0%
CCATTGAAATCAGTTTATAC+TGG - chr8_4:54828015-54828034 None:intergenic 30.0%
! CCAGTATAAACTGATTTCAA+TGG + chr8_4:54828012-54828031 Msa1334400:intron 30.0%
!! TGTTAAACTTGTTGATCAGT+TGG + chr8_4:54828055-54828074 Msa1334400:CDS 30.0%
!!! TCTATGAAGTTTTTTCACCT+TGG - chr8_4:54828114-54828133 None:intergenic 30.0%
!! TAAAAGCTTTCTTCTAGCTT+TGG - chr8_4:54828179-54828198 None:intergenic 30.0%
TTTGTTTCACAAATACATCC+TGG - chr8_4:54828215-54828234 None:intergenic 30.0%
CAATATGATTATCCAAAAGC+TGG + chr8_4:54828368-54828387 Msa1334400:three_prime_UTR 30.0%
!!! CAGTTTTAGAGATCAAGTTT+GGG + chr8_4:54828486-54828505 Msa1334400:three_prime_UTR 30.0%
ATTGCGTGTATAGTATACTT+TGG - chr8_4:54828516-54828535 None:intergenic 30.0%
GACGTTTGTTTAATAAGGTA+TGG - chr8_4:54828551-54828570 None:intergenic 30.0%
TTAATATCAAAAAAAGGGGG+TGG + chr8_4:54828639-54828658 Msa1334400:three_prime_UTR 30.0%
! CATCTGTAATTCTTTTAAGC+AGG + chr8_4:54828768-54828787 Msa1334400:three_prime_UTR 30.0%
TTCTCTGAATCAAATTCCGA+TGG + chr8_4:54824018-54824037 Msa1334400:CDS 35.0%
! GAATCCATTGCTGTAGATTT+TGG + chr8_4:54824303-54824322 Msa1334400:CDS 35.0%
AGAAGAAAAAGCTTGGACAT+TGG + chr8_4:54824334-54824353 Msa1334400:CDS 35.0%
!!! TGGATGTTTTTGGTGTTTTG+TGG + chr8_4:54824354-54824373 Msa1334400:CDS 35.0%
!!! GGATGTTTTTGGTGTTTTGT+GGG + chr8_4:54824355-54824374 Msa1334400:CDS 35.0%
!!! GATGTTTTTGGTGTTTTGTG+GGG + chr8_4:54824356-54824375 Msa1334400:CDS 35.0%
! TTGTGGGGTTTGTTTGTTTA+TGG + chr8_4:54824371-54824390 Msa1334400:CDS 35.0%
! TGTGGGGTTTGTTTGTTTAT+GGG + chr8_4:54824372-54824391 Msa1334400:CDS 35.0%
GTTCTTAAGATTTGTGCTAC+TGG + chr8_4:54824396-54824415 Msa1334400:CDS 35.0%
! TTAAGATTTGTGCTACTGGT+TGG + chr8_4:54824400-54824419 Msa1334400:CDS 35.0%
GATTGTATCTTACACTGCAA+AGG + chr8_4:54824478-54824497 Msa1334400:intron 35.0%
! GTCATTTGTTAATGTGTGCA+AGG + chr8_4:54824728-54824747 Msa1334400:intron 35.0%
! TTGACTCGAAAAGTAAAAGC+TGG - chr8_4:54824790-54824809 None:intergenic 35.0%
! TATAATGGGGTGAAGAACTT+AGG + chr8_4:54825003-54825022 Msa1334400:intron 35.0%
TACACGCCTTAATGTTTGTT+TGG + chr8_4:54825170-54825189 Msa1334400:intron 35.0%
GTTAAATGGATCCAAACTTG+TGG - chr8_4:54825218-54825237 None:intergenic 35.0%
!! CCACCATATAAAAGTTGGTA+TGG - chr8_4:54825322-54825341 None:intergenic 35.0%
! CCATACCAACTTTTATATGG+TGG + chr8_4:54825319-54825338 Msa1334400:intron 35.0%
GTTGTCCACCATATAAAAGT+TGG - chr8_4:54825327-54825346 None:intergenic 35.0%
!! ACTTTCTTTTGTTTGGGGAT+TGG + chr8_4:54825515-54825534 Msa1334400:intron 35.0%
ACTCCTATATGCATAACCAA+GGG - chr8_4:54825652-54825671 None:intergenic 35.0%
TATGCATATAGGAGTCAAGA+AGG + chr8_4:54825657-54825676 Msa1334400:CDS 35.0%
TTATTCAGGAATCAGAAGTC+TGG + chr8_4:54825846-54825865 Msa1334400:intron 35.0%
! TGGGTGAAATTTTCACTGTT+GGG - chr8_4:54825878-54825897 None:intergenic 35.0%
! TTGGGTGAAATTTTCACTGT+TGG - chr8_4:54825879-54825898 None:intergenic 35.0%
TCTAGAGAGATCGATACATT+GGG - chr8_4:54825897-54825916 None:intergenic 35.0%
! TTCTAGAGAGATCGATACAT+TGG - chr8_4:54825898-54825917 None:intergenic 35.0%
CTCAACTGCATAATAGGAAA+AGG - chr8_4:54825958-54825977 None:intergenic 35.0%
GGAATACTCAACTGCATAAT+AGG - chr8_4:54825964-54825983 None:intergenic 35.0%
GCCTAAATCAGATGAGATTT+GGG + chr8_4:54826072-54826091 Msa1334400:CDS 35.0%
CCTAAATCAGATGAGATTTG+GGG + chr8_4:54826073-54826092 Msa1334400:CDS 35.0%
TTGATGCCAGATATGTGATA+TGG + chr8_4:54826169-54826188 Msa1334400:intron 35.0%
TGCTGTTGCTAAGATTATGA+AGG + chr8_4:54826193-54826212 Msa1334400:CDS 35.0%
CCAATCATCCAAATCTAAAG+AGG - chr8_4:54826291-54826310 None:intergenic 35.0%
CCTCTTTAGATTTGGATGAT+TGG + chr8_4:54826288-54826307 Msa1334400:intron 35.0%
!! AGAAAAGGCTTTGAAATCGA+TGG - chr8_4:54826512-54826531 None:intergenic 35.0%
GGGATGATTGTCTAAAGAAA+AGG - chr8_4:54826527-54826546 None:intergenic 35.0%
! GCAATCTTCCCTTTAAAAGT+TGG - chr8_4:54826548-54826567 None:intergenic 35.0%
!! GCTTTAAGGATTTGTTTGAC+TGG + chr8_4:54826709-54826728 Msa1334400:CDS 35.0%
! GTGGTAATGTCTCTACTATA+TGG - chr8_4:54826767-54826786 None:intergenic 35.0%
GATTTACCACATTCTTGTTG+AGG + chr8_4:54826874-54826893 Msa1334400:intron 35.0%
CCATCTTGTCTTTATATAGC+CGG + chr8_4:54826905-54826924 Msa1334400:intron 35.0%
CGTTTACTTAACAACTTAGC+CGG - chr8_4:54826927-54826946 None:intergenic 35.0%
CGGCTAAGTTGTTAAGTAAA+CGG + chr8_4:54826925-54826944 Msa1334400:intron 35.0%
AGGGATGCAATTATTTGATG+TGG - chr8_4:54827003-54827022 None:intergenic 35.0%
AGAACCTCTGTCTTGTAATA+AGG - chr8_4:54827080-54827099 None:intergenic 35.0%
!! AGATCACTTTGTGCTGATTT+AGG - chr8_4:54827109-54827128 None:intergenic 35.0%
!! ATTTCACTCATACTGATTCC+CGG + chr8_4:54827129-54827148 Msa1334400:CDS 35.0%
TCAATGCTCTGTAGTTTACA+CGG - chr8_4:54827199-54827218 None:intergenic 35.0%
CTTAAATGAAGGGCAAGATA+AGG - chr8_4:54827287-54827306 None:intergenic 35.0%
CTTATCTTGCCCTTCATTTA+AGG + chr8_4:54827285-54827304 Msa1334400:CDS 35.0%
AAGAGATTAATGGGACTGAA+AGG + chr8_4:54827540-54827559 Msa1334400:CDS 35.0%
! AGGAAGTATGAAATATCTCG+AGG + chr8_4:54827676-54827695 Msa1334400:CDS 35.0%
AGGAATGAGAGAAAATGTTG+GGG - chr8_4:54827709-54827728 None:intergenic 35.0%
GAGGAATGAGAGAAAATGTT+GGG - chr8_4:54827710-54827729 None:intergenic 35.0%
AGAGGAATGAGAGAAAATGT+TGG - chr8_4:54827711-54827730 None:intergenic 35.0%
AATCATCAAAACATGTTGGC+TGG + chr8_4:54827764-54827783 Msa1334400:CDS 35.0%
AAGAAATACGTCACTCTGAA+GGG - chr8_4:54827807-54827826 None:intergenic 35.0%
AAAGAAATACGTCACTCTGA+AGG - chr8_4:54827808-54827827 None:intergenic 35.0%
TTACGATGGAAATATGGCAA+AGG + chr8_4:54827832-54827851 Msa1334400:CDS 35.0%
TATCCAAAAGCTGGATTATC+TGG + chr8_4:54828377-54828396 Msa1334400:three_prime_UTR 35.0%
! TTACCAGATAATCCAGCTTT+TGG - chr8_4:54828383-54828402 None:intergenic 35.0%
AAAAGCTGGATTATCTGGTA+AGG + chr8_4:54828382-54828401 Msa1334400:three_prime_UTR 35.0%
TACCATTGCCATATATTGCT+TGG + chr8_4:54828405-54828424 Msa1334400:three_prime_UTR 35.0%
ATCCAAGCAATATATGGCAA+TGG - chr8_4:54828410-54828429 None:intergenic 35.0%
CCATATATTGCTTGGATGTT+GGG + chr8_4:54828413-54828432 Msa1334400:three_prime_UTR 35.0%
!!! GCAGTTTTAGAGATCAAGTT+TGG + chr8_4:54828485-54828504 Msa1334400:three_prime_UTR 35.0%
TCTAACACTTCTTCCGATCT+GGG - chr8_4:54824192-54824211 None:intergenic 40.0%
! CATGAACTCTCTGAGAAACA+TGG - chr8_4:54824248-54824267 None:intergenic 40.0%
CATGTTTCTCAGAGAGTTCA+TGG + chr8_4:54824246-54824265 Msa1334400:CDS 40.0%
! TCTACAGCAATGGATTCAAG+TGG - chr8_4:54824300-54824319 None:intergenic 40.0%
! GCTTGGACATTGGATGTTTT+TGG + chr8_4:54824344-54824363 Msa1334400:CDS 40.0%
GTGTGGATGTTTGTTCAAAG+TGG + chr8_4:54824575-54824594 Msa1334400:intron 40.0%
TGCAATCAACTAGGTTGCTT+TGG + chr8_4:54824910-54824929 Msa1334400:intron 40.0%
! AATCAACTAGGTTGCTTTGG+AGG + chr8_4:54824913-54824932 Msa1334400:intron 40.0%
AAATGGATCCAAACTTGTGG+TGG - chr8_4:54825215-54825234 None:intergenic 40.0%
AGTTTGGATCCATTTAACCG+TGG + chr8_4:54825220-54825239 Msa1334400:intron 40.0%
GATCCATTTAACCGTGGAAA+TGG + chr8_4:54825226-54825245 Msa1334400:intron 40.0%
TCTCCATTTCCACGGTTAAA+TGG - chr8_4:54825232-54825251 None:intergenic 40.0%
AATTCCAAATGGTAGGGAGA+TGG + chr8_4:54825425-54825444 Msa1334400:intron 40.0%
!! TTCTTTTGTTTGGGGATTGG+AGG + chr8_4:54825518-54825537 Msa1334400:intron 40.0%
ATGCATAACCAAGGGATCTT+TGG - chr8_4:54825644-54825663 None:intergenic 40.0%
GATCCCTTGGTTATGCATAT+AGG + chr8_4:54825646-54825665 Msa1334400:CDS 40.0%
GACTCCTATATGCATAACCA+AGG - chr8_4:54825653-54825672 None:intergenic 40.0%
! TGTGGAACGAACTCTAAAGA+CGG + chr8_4:54825683-54825702 Msa1334400:CDS 40.0%
! ACTCTAAAGACGGTAGAAAC+AGG + chr8_4:54825693-54825712 Msa1334400:CDS 40.0%
GGCCTAAATCAGATGAGATT+TGG + chr8_4:54826071-54826090 Msa1334400:CDS 40.0%
CCCCAAATCTCATCTGATTT+AGG - chr8_4:54826076-54826095 None:intergenic 40.0%
CAGCAACCATATCACATATC+TGG - chr8_4:54826178-54826197 None:intergenic 40.0%
TACGAGGTATGATCAAGAGA+AGG - chr8_4:54826233-54826252 None:intergenic 40.0%
TCTTGATCATACCTCGTACT+GGG + chr8_4:54826235-54826254 Msa1334400:CDS 40.0%
!! ACCCTTTTGCTATCAAGTGA+TGG + chr8_4:54826613-54826632 Msa1334400:intron 40.0%
! CCCATCACTTGATAGCAAAA+GGG - chr8_4:54826617-54826636 None:intergenic 40.0%
!! CCCTTTTGCTATCAAGTGAT+GGG + chr8_4:54826614-54826633 Msa1334400:intron 40.0%
! ACCCATCACTTGATAGCAAA+AGG - chr8_4:54826618-54826637 None:intergenic 40.0%
AACTCCAATATCTTGGTCCA+AGG + chr8_4:54826818-54826837 Msa1334400:CDS 40.0%
GTTACCTTGGACCAAGATAT+TGG - chr8_4:54826825-54826844 None:intergenic 40.0%
TACCACATTCTTGTTGAGGT+CGG + chr8_4:54826878-54826897 Msa1334400:intron 40.0%
CCGGCTATATAAAGACAAGA+TGG - chr8_4:54826908-54826927 None:intergenic 40.0%
GGTTCCTTATTACAAGACAG+AGG + chr8_4:54827073-54827092 Msa1334400:intron 40.0%
!! ACTTTGTGCTGATTTAGGAG+GGG - chr8_4:54827104-54827123 None:intergenic 40.0%
!! CACTTTGTGCTGATTTAGGA+GGG - chr8_4:54827105-54827124 None:intergenic 40.0%
!! TCACTTTGTGCTGATTTAGG+AGG - chr8_4:54827106-54827125 None:intergenic 40.0%
ACGGCATCTTAGTTTCTGTA+TGG - chr8_4:54827180-54827199 None:intergenic 40.0%
TCAGCTCCAGTTGAAGAATT+TGG + chr8_4:54827224-54827243 Msa1334400:CDS 40.0%
! GTATCTAGAATGCAGCAGAA+TGG + chr8_4:54827257-54827276 Msa1334400:CDS 40.0%
CAGAAGAAGATGAAGAACTG+AGG + chr8_4:54827483-54827502 Msa1334400:CDS 40.0%
! ATATGAAGTTGGTCACTGGA+AGG + chr8_4:54827514-54827533 Msa1334400:CDS 40.0%
AGTAGTAAGGAAGTTTCCCT+CGG - chr8_4:54827593-54827612 None:intergenic 40.0%
! TCCTTACTACTTAGAGCACT+TGG + chr8_4:54827602-54827621 Msa1334400:CDS 40.0%
! ACCAAGTGCTCTAAGTAGTA+AGG - chr8_4:54827606-54827625 None:intergenic 40.0%
AATATGGCAAAGGCTGTACA+AGG + chr8_4:54827842-54827861 Msa1334400:CDS 40.0%
!! GATTTCAATGGTGTTGATGC+AGG + chr8_4:54828024-54828043 Msa1334400:intron 40.0%
TGGACGAAGGAAACATTTCT+TGG + chr8_4:54828075-54828094 Msa1334400:CDS 40.0%
TTGGAAAAAGTTCAGCTCCA+AGG + chr8_4:54828094-54828113 Msa1334400:CDS 40.0%
AAACTTCATAGAGACCGTGA+CGG + chr8_4:54828122-54828141 Msa1334400:CDS 40.0%
TGCTCCATATCTAAGAGAGT+CGG + chr8_4:54828145-54828164 Msa1334400:CDS 40.0%
! TTTTATGCAAATCCTCTGCC+AGG + chr8_4:54828194-54828213 Msa1334400:CDS 40.0%
GCCATATATTGCTTGGATGT+TGG + chr8_4:54828412-54828431 Msa1334400:three_prime_UTR 40.0%
CCCAACATCCAAGCAATATA+TGG - chr8_4:54828416-54828435 None:intergenic 40.0%
TGTTGGGATAAGATTGCAAG+TGG + chr8_4:54828429-54828448 Msa1334400:three_prime_UTR 40.0%
TTTAGAGATCAAGTTTGGGC+TGG + chr8_4:54828490-54828509 Msa1334400:three_prime_UTR 40.0%
GCAAATCAACTCACCCAGAT+CGG + chr8_4:54824176-54824195 Msa1334400:CDS 45.0%
CTCTAACACTTCTTCCGATC+TGG - chr8_4:54824193-54824212 None:intergenic 45.0%
TTAGAGCCTGTTTCGAAGCA+TGG + chr8_4:54824207-54824226 Msa1334400:CDS 45.0%
TGATGACCATGCTTCGAAAC+AGG - chr8_4:54824216-54824235 None:intergenic 45.0%
GTTTCTCAGAGAGTTCATGG+TGG + chr8_4:54824249-54824268 Msa1334400:CDS 45.0%
! AGTTCATGGTGGAGTTGTGA+AGG + chr8_4:54824260-54824279 Msa1334400:CDS 45.0%
! GTTCATGGTGGAGTTGTGAA+GGG + chr8_4:54824261-54824280 Msa1334400:CDS 45.0%
! ATTTGTGCTACTGGTTGGCT+TGG + chr8_4:54824405-54824424 Msa1334400:CDS 45.0%
ACCATTTAGTAGTAGGGAGC+TGG + chr8_4:54825100-54825119 Msa1334400:intron 45.0%
CCATTTAGTAGTAGGGAGCT+GGG + chr8_4:54825101-54825120 Msa1334400:intron 45.0%
ACTTGTCTCCACCACAAGTT+TGG + chr8_4:54825204-54825223 Msa1334400:intron 45.0%
! ACAAAACGTGCGTCCACTTT+TGG + chr8_4:54825273-54825292 Msa1334400:intron 45.0%
!! CAAAACGTGCGTCCACTTTT+GGG + chr8_4:54825274-54825293 Msa1334400:intron 45.0%
CAGGAACTATCTGACTCCAA+TGG + chr8_4:54825594-54825613 Msa1334400:intron 45.0%
TAGGAGTCAAGAAGGAGATG+TGG + chr8_4:54825665-54825684 Msa1334400:CDS 45.0%
AAGACGGTAGAAACAGGAGT+AGG + chr8_4:54825699-54825718 Msa1334400:CDS 45.0%
GAGTTCTCACTTTAGCAGTG+TGG - chr8_4:54825731-54825750 None:intergenic 45.0%
AAGTGAGTGGAGGGATATCT+TGG - chr8_4:54825985-54826004 None:intergenic 45.0%
GTGCTAGATGCAAAGACCAA+CGG + chr8_4:54826023-54826042 Msa1334400:intron 45.0%
CTCTTGATCATACCTCGTAC+TGG + chr8_4:54826234-54826253 Msa1334400:CDS 45.0%
CGATAGACCTGTTCAAAGCA+TGG + chr8_4:54826401-54826420 Msa1334400:intron 45.0%
! TGCTATGCCATGCTTTGAAC+AGG - chr8_4:54826411-54826430 None:intergenic 45.0%
ACATTACCACCTACCTATGC+TGG + chr8_4:54826777-54826796 Msa1334400:CDS 45.0%
TGAATTCCAGCATAGGTAGG+TGG - chr8_4:54826786-54826805 None:intergenic 45.0%
AGCACAGGTTATGGTTACCT+TGG - chr8_4:54826838-54826857 None:intergenic 45.0%
AATGCCATTGTTAGCAAGCC+GGG - chr8_4:54827150-54827169 None:intergenic 45.0%
GAATGCCATTGTTAGCAAGC+CGG - chr8_4:54827151-54827170 None:intergenic 45.0%
AGGCAGATGCGATATGAAGT+TGG + chr8_4:54827503-54827522 Msa1334400:CDS 45.0%
! TGCGATATGAAGTTGGTCAC+TGG + chr8_4:54827510-54827529 Msa1334400:CDS 45.0%
ACTGAAAGGAGATTGCTTGG+TGG + chr8_4:54827554-54827573 Msa1334400:CDS 45.0%
GAAGTTTCCCTCGGAGTTAA+TGG - chr8_4:54827584-54827603 None:intergenic 45.0%
!! TTGGTTTTCCATCACACACC+AGG + chr8_4:54827621-54827640 Msa1334400:CDS 45.0%
AGGTAAATCCTGGTGTGTGA+TGG - chr8_4:54827632-54827651 None:intergenic 45.0%
CTCATCTTCAGAAGACAGAG+AGG - chr8_4:54827729-54827748 None:intergenic 45.0%
CAAAGGCTGTACAAGGTCAT+AGG + chr8_4:54827849-54827868 Msa1334400:CDS 45.0%
CTTGTTGATCAGTTGGACGA+AGG + chr8_4:54828062-54828081 Msa1334400:CDS 45.0%
!! TTAGATATGGAGCACCGTCA+CGG - chr8_4:54828139-54828158 None:intergenic 45.0%
GCTCCATATCTAAGAGAGTC+GGG + chr8_4:54828146-54828165 Msa1334400:CDS 45.0%
TCTCCCGACTCTCTTAGATA+TGG - chr8_4:54828152-54828171 None:intergenic 45.0%
TCACAAATACATCCTGGCAG+AGG - chr8_4:54828209-54828228 None:intergenic 45.0%
GCTGCAATCATATGGCATTG+TGG + chr8_4:54828295-54828314 Msa1334400:three_prime_UTR 45.0%
ATCATATGGCATTGTGGCTG+TGG + chr8_4:54828301-54828320 Msa1334400:three_prime_UTR 45.0%
!!! ATTTAATTTAATATAATCTT+TGG + chr8_4:54824521-54824540 Msa1334400:intron 5.0%
GACTCGCTGTGAAACTCCAT+CGG - chr8_4:54824037-54824056 None:intergenic 50.0%
GTCAACAGTCCACGTTTCTC+CGG + chr8_4:54824054-54824073 Msa1334400:CDS 50.0%
TGCGTTTGAAGGACTGAGCA+CGG - chr8_4:54824092-54824111 None:intergenic 50.0%
TTCAAACGCAACAACGCCAG+CGG + chr8_4:54824102-54824121 Msa1334400:CDS 50.0%
CCCAGCTCCCTACTACTAAA+TGG - chr8_4:54825104-54825123 None:intergenic 50.0%
TTAGTAGTAGGGAGCTGGGA+AGG + chr8_4:54825105-54825124 Msa1334400:intron 50.0%
CCGTAGCTTCTCCATTTCCA+CGG - chr8_4:54825240-54825259 None:intergenic 50.0%
CCGTGGAAATGGAGAAGCTA+CGG + chr8_4:54825237-54825256 Msa1334400:intron 50.0%
TTTCAGCCGCTACCCAAAAG+TGG - chr8_4:54825289-54825308 None:intergenic 50.0%
GACTCCATCTCCCTACCATT+TGG - chr8_4:54825432-54825451 None:intergenic 50.0%
TTTGTTTGGGGATTGGAGGC+AGG + chr8_4:54825522-54825541 Msa1334400:intron 50.0%
TTGTTTGGGGATTGGAGGCA+GGG + chr8_4:54825523-54825542 Msa1334400:intron 50.0%
! CTAGTGGACCAAAGATCCCT+TGG + chr8_4:54825633-54825652 Msa1334400:CDS 50.0%
ACGGTAGAAACAGGAGTAGG+TGG + chr8_4:54825702-54825721 Msa1334400:CDS 50.0%
GGCTGAATTCCAGCATAGGT+AGG - chr8_4:54826789-54826808 None:intergenic 50.0%
GAACGGCTGAATTCCAGCAT+AGG - chr8_4:54826793-54826812 None:intergenic 50.0%
!! GATTCCCGGCTTGCTAACAA+TGG + chr8_4:54827143-54827162 Msa1334400:CDS 50.0%
GGGACTGAAAGGAGATTGCT+TGG + chr8_4:54827551-54827570 Msa1334400:CDS 50.0%
TGGCTGTCCATTAACTCCGA+GGG + chr8_4:54827574-54827593 Msa1334400:CDS 50.0%
ACCAGGATTTACCTCGTAGC+TGG + chr8_4:54827638-54827657 Msa1334400:CDS 50.0%
TCCAGCTACGAGGTAAATCC+TGG - chr8_4:54827642-54827661 None:intergenic 50.0%
CATATGCTTCTCCAGCTACG+AGG - chr8_4:54827652-54827671 None:intergenic 50.0%
! CTCGTAGCTGGAGAAGCATA+TGG + chr8_4:54827650-54827669 Msa1334400:CDS 50.0%
! GCTGGAGAAGCATATGGAAG+AGG + chr8_4:54827656-54827675 Msa1334400:CDS 50.0%
GCTGGCGTTGTTGCGTTTGA+AGG - chr8_4:54824103-54824122 None:intergenic 55.0%
!! GTGCGTCCACTTTTGGGTAG+CGG + chr8_4:54825280-54825299 Msa1334400:intron 55.0%
GGCCGACCTCAACAAGAATG+TGG - chr8_4:54826883-54826902 None:intergenic 55.0%
GTGGCTGTCCATTAACTCCG+AGG + chr8_4:54827573-54827592 Msa1334400:CDS 55.0%
GTCATCGGACCGGAGAAACG+TGG - chr8_4:54824066-54824085 None:intergenic 60.0%
GACTGAGCACGGCGAGTCAT+CGG - chr8_4:54824081-54824100 None:intergenic 60.0%
CCTCTGATCAGCCCAGTACG+AGG - chr8_4:54826249-54826268 None:intergenic 60.0%
CCTCGTACTGGGCTGATCAG+AGG + chr8_4:54826246-54826265 Msa1334400:CDS 60.0%
AGCACGGCGAGTCATCGGAC+CGG - chr8_4:54824076-54824095 None:intergenic 65.0%
GAGTGCGCCGCCGCTCACGA+CGG - chr8_4:54824133-54824152 None:intergenic 75.0%
! AGCGGCGCCGCCGTCGTGAG+CGG + chr8_4:54824120-54824139 Msa1334400:CDS 80.0%
! TGCGCCGCCGCTCACGACGG+CGG - chr8_4:54824130-54824149 None:intergenic 80.0%
! GCTCACGACGGCGGCGCCGC+TGG - chr8_4:54824121-54824140 None:intergenic 85.0%
! GGCGCCGCCGTCGTGAGCGG+CGG + chr8_4:54824123-54824142 Msa1334400:CDS 85.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 54823769 54828828 54823769 ID=Msa1334400;Name=Msa1334400
chr8_4 mRNA 54823769 54828828 54823769 ID=Msa1334400-mRNA-1;Parent=Msa1334400;Name=Msa1334400-mRNA-1;_AED=0.06;_eAED=0.06;_QI=231|1|1|1|1|1|9|581|626
chr8_4 exon 54823769 54824458 54823769 ID=Msa1334400-mRNA-1:exon:17075;Parent=Msa1334400-mRNA-1
chr8_4 exon 54825597 54825740 54825597 ID=Msa1334400-mRNA-1:exon:17076;Parent=Msa1334400-mRNA-1
chr8_4 exon 54825854 54825926 54825854 ID=Msa1334400-mRNA-1:exon:17077;Parent=Msa1334400-mRNA-1
chr8_4 exon 54826024 54826094 54826024 ID=Msa1334400-mRNA-1:exon:17078;Parent=Msa1334400-mRNA-1
chr8_4 exon 54826179 54826267 54826179 ID=Msa1334400-mRNA-1:exon:17079;Parent=Msa1334400-mRNA-1
chr8_4 exon 54826707 54826839 54826707 ID=Msa1334400-mRNA-1:exon:17080;Parent=Msa1334400-mRNA-1
chr8_4 exon 54827074 54827306 54827074 ID=Msa1334400-mRNA-1:exon:17081;Parent=Msa1334400-mRNA-1
chr8_4 exon 54827433 54827909 54827433 ID=Msa1334400-mRNA-1:exon:17082;Parent=Msa1334400-mRNA-1
chr8_4 exon 54828046 54828828 54828046 ID=Msa1334400-mRNA-1:exon:17083;Parent=Msa1334400-mRNA-1
chr8_4 five_prime_UTR 54823769 54823999 54823769 ID=Msa1334400-mRNA-1:five_prime_utr;Parent=Msa1334400-mRNA-1
chr8_4 CDS 54824000 54824458 54824000 ID=Msa1334400-mRNA-1:cds;Parent=Msa1334400-mRNA-1
chr8_4 CDS 54825597 54825740 54825597 ID=Msa1334400-mRNA-1:cds;Parent=Msa1334400-mRNA-1
chr8_4 CDS 54825854 54825926 54825854 ID=Msa1334400-mRNA-1:cds;Parent=Msa1334400-mRNA-1
chr8_4 CDS 54826024 54826094 54826024 ID=Msa1334400-mRNA-1:cds;Parent=Msa1334400-mRNA-1
chr8_4 CDS 54826179 54826267 54826179 ID=Msa1334400-mRNA-1:cds;Parent=Msa1334400-mRNA-1
chr8_4 CDS 54826707 54826839 54826707 ID=Msa1334400-mRNA-1:cds;Parent=Msa1334400-mRNA-1
chr8_4 CDS 54827074 54827306 54827074 ID=Msa1334400-mRNA-1:cds;Parent=Msa1334400-mRNA-1
chr8_4 CDS 54827433 54827909 54827433 ID=Msa1334400-mRNA-1:cds;Parent=Msa1334400-mRNA-1
chr8_4 CDS 54828046 54828247 54828046 ID=Msa1334400-mRNA-1:cds;Parent=Msa1334400-mRNA-1
chr8_4 three_prime_UTR 54828248 54828828 54828248 ID=Msa1334400-mRNA-1:three_prime_utr;Parent=Msa1334400-mRNA-1
Gene Sequence

>Msa1334400

ATGACATTAATGTCTACATTCTCTGAATCAAATTCCGATGGAGTTTCACAGCGAGTCAACAGTCCACGTTTCTCCGGTCCGATGACTCGCCGTGCTCAGTCCTTCAAACGCAACAACGCCAGCGGCGCCGCCGTCGTGAGCGGCGGCGCACTCAGTACACACAATGAAGTTGAGCTGCAAATCAACTCACCCAGATCGGAAGAAGTGTTAGAGCCTGTTTCGAAGCATGGTCATCATCATCATCACCATGTTTCTCAGAGAGTTCATGGTGGAGTTGTGAAGGGTTTTCTAAAAAGACCACTTGAATCCATTGCTGTAGATTTTGGATTTAGAGAGAAGAAAAAGCTTGGACATTGGATGTTTTTGGTGTTTTGTGGGGTTTGTTTGTTTATGGGTGTTCTTAAGATTTGTGCTACTGGTTGGCTTGGATCTGCCATTGAAAAAGCTCAATCTTATCAGGAACTATCTGACTCCAATGGAATTGATAATCTAAATCTAGTGGACCAAAGATCCCTTGGTTATGCATATAGGAGTCAAGAAGGAGATGTGGAACGAACTCTAAAGACGGTAGAAACAGGAGTAGGTGGCAGCCACACTGCTAAAGAATCAGAAGTCTGGTCTAAGCCCAACAGTGAAAATTTCACCCAATGTATCGATCTCTCTAGAAATCATAAAATGCTAGATGCAAAGACCAACGGATATATTCTTGTAAATGCTAATGGGGGCCTAAATCAGATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACACTAGTTCTTCCTTCTCTTGATCATACCTCGTACTGGGCTGATCAGAGTGGCTTTAAGGATTTGTTTGACTGGAAGCATTTTATTGATACACTGAAGGATGATGTCCATATAGTAGAGACATTACCACCTACCTATGCTGGAATTCAGCCGTTCTCAAAAACTCCAATATCTTGGTCCAAGGTTCCTTATTACAAGACAGAGGTTCTTCCCCTCCTAAATCAGCACAAAGTGATCTATTTCACTCATACTGATTCCCGGCTTGCTAACAATGGCATTCCAAAATCCATACAGAAACTAAGATGCCGTGTAAACTACAGAGCATTGAGATATTCAGCTCCAGTTGAAGAATTTGGAAACAAACTGGTATCTAGAATGCAGCAGAATGGAAATCCTTATCTTGCCCTTCATTTAAGATATGAGAAAGATATGCTTGCATTTACTGGTTGCAGTCACAGTTTGACTGCAGAAGAAGATGAAGAACTGAGGCAGATGCGATATGAAGTTGGTCACTGGAAGGAAAAAGAGATTAATGGGACTGAAAGGAGATTGCTTGGTGGCTGTCCATTAACTCCGAGGGAAACTTCCTTACTACTTAGAGCACTTGGTTTTCCATCACACACCAGGATTTACCTCGTAGCTGGAGAAGCATATGGAAGAGGAAGTATGAAATATCTCGAGGATGATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCTTCTGAAGATGAGCTGAATCCTTTCAAGAATCATCAAAACATGTTGGCTGGTATTGACTATGTTGTTGCCCTTCAGAGTGACGTATTTCTTTACACTTACGATGGAAATATGGCAAAGGCTGTACAAGGTCATAGGCGCTTTGAAAACTTCAAGAAGACCATCAATCCAGACAAGATGAATTTTGTTAAACTTGTTGATCAGTTGGACGAAGGAAACATTTCTTGGAAAAAGTTCAGCTCCAAGGTGAAAAAACTTCATAGAGACCGTGACGGTGCTCCATATCTAAGAGAGTCGGGAGAATTTCCAAAGCTAGAAGAAAGCTTTTATGCAAATCCTCTGCCAGGATGTATTTGTGAAACAAAAAGGAGTAGATAA
Protein sequence

>Msa1334400

MTLMSTFSESNSDGVSQRVNSPRFSGPMTRRAQSFKRNNASGAAVVSGGALSTHNEVELQINSPRSEEVLEPVSKHGHHHHHHVSQRVHGGVVKGFLKRPLESIAVDFGFREKKKLGHWMFLVFCGVCLFMGVLKICATGWLGSAIEKAQSYQELSDSNGIDNLNLVDQRSLGYAYRSQEGDVERTLKTVETGVGGSHTAKESEVWSKPNSENFTQCIDLSRNHKMLDAKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWADQSGFKDLFDWKHFIDTLKDDVHIVETLPPTYAGIQPFSKTPISWSKVPYYKTEVLPLLNQHKVIYFTHTDSRLANNGIPKSIQKLRCRVNYRALRYSAPVEEFGNKLVSRMQQNGNPYLALHLRYEKDMLAFTGCSHSLTAEEDEELRQMRYEVGHWKEKEINGTERRLLGGCPLTPRETSLLLRALGFPSHTRIYLVAGEAYGRGSMKYLEDDFPNIFSHSSLSSEDELNPFKNHQNMLAGIDYVVALQSDVFLYTYDGNMAKAVQGHRRFENFKKTINPDKMNFVKLVDQLDEGNISWKKFSSKVKKLHRDRDGAPYLRESGEFPKLEESFYANPLPGCICETKRSR*