Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746340 | XP_039689563.1 | 96.667 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 0.0 | 670 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746340 | sp|F4JVA9|SFH2_ARATH | 32.340 | 235 | 139 | 5 | 34 | 254 | 97 | 325 | 1.00e-21 | 99.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746340 | A0A396IML6 | 96.667 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 0.0 | 670 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa0746340 | 0.804303 | 2.304901e-49 | -8.615850e-47 |
| Msa0014280 | Msa0746340 | 0.815697 | 8.094542e-52 | -8.615850e-47 |
| Msa0026420 | Msa0746340 | 0.866591 | 2.550071e-65 | -8.615850e-47 |
| Msa0030800 | Msa0746340 | 0.848936 | 4.461005e-60 | -8.615850e-47 |
| Msa0034540 | Msa0746340 | 0.817460 | 3.260162e-52 | -8.615850e-47 |
| Msa0035790 | Msa0746340 | 0.806487 | 8.032561e-50 | -8.615850e-47 |
| Msa0046680 | Msa0746340 | 0.813982 | 1.942667e-51 | -8.615850e-47 |
| Msa0051480 | Msa0746340 | 0.875962 | 2.036342e-68 | -8.615850e-47 |
| Msa0051620 | Msa0746340 | 0.860819 | 1.583496e-63 | -8.615850e-47 |
| Msa0051730 | Msa0746340 | 0.856365 | 3.379309e-62 | -8.615850e-47 |
| Msa0071470 | Msa0746340 | 0.830062 | 3.628401e-55 | -8.615850e-47 |
| Msa0078210 | Msa0746340 | 0.842831 | 2.033362e-58 | -8.615850e-47 |
| Msa0083890 | Msa0746340 | 0.832890 | 7.300471e-56 | -8.615850e-47 |
| Msa0086360 | Msa0746340 | 0.867004 | 1.883982e-65 | -8.615850e-47 |
| Msa0089890 | Msa0746340 | 0.839475 | 1.550175e-57 | -8.615850e-47 |
| Msa0107830 | Msa0746340 | 0.815792 | 7.708819e-52 | -8.615850e-47 |
| Msa0606340 | Msa0746340 | -0.818524 | 1.874505e-52 | -8.615850e-47 |
| Msa0631130 | Msa0746340 | 0.823120 | 1.643223e-53 | -8.615850e-47 |
| Msa0645480 | Msa0746340 | 0.839509 | 1.519082e-57 | -8.615850e-47 |
| Msa0650560 | Msa0746340 | 0.816032 | 6.815514e-52 | -8.615850e-47 |
| Msa0657260 | Msa0746340 | 0.800618 | 1.324530e-48 | -8.615850e-47 |
| Msa0657340 | Msa0746340 | 0.812950 | 3.274789e-51 | -8.615850e-47 |
| Msa0669350 | Msa0746340 | 0.814794 | 1.285239e-51 | -8.615850e-47 |
| Msa0675590 | Msa0746340 | 0.808334 | 3.259923e-50 | -8.615850e-47 |
| Msa0690100 | Msa0746340 | -0.817405 | 3.354165e-52 | -8.615850e-47 |
| Msa0699800 | Msa0746340 | 0.823287 | 1.502457e-53 | -8.615850e-47 |
| Msa0701430 | Msa0746340 | 0.808941 | 2.418575e-50 | -8.615850e-47 |
| Msa0701490 | Msa0746340 | 0.823778 | 1.153184e-53 | -8.615850e-47 |
| Msa0701560 | Msa0746340 | 0.822292 | 2.561286e-53 | -8.615850e-47 |
| Msa0704560 | Msa0746340 | 0.834140 | 3.560539e-56 | -8.615850e-47 |
| Msa0716620 | Msa0746340 | 0.815231 | 1.027611e-51 | -8.615850e-47 |
| Msa0740630 | Msa0746340 | 0.872248 | 3.680003e-67 | -8.615850e-47 |
| Msa0744540 | Msa0746340 | 0.823046 | 1.710105e-53 | -8.615850e-47 |
| Msa0744550 | Msa0746340 | 0.858566 | 7.547325e-63 | -8.615850e-47 |
| Msa0744560 | Msa0746340 | 0.872927 | 2.182017e-67 | -8.615850e-47 |
| Msa0746340 | Msa0781210 | 0.832851 | 7.467637e-56 | -8.615850e-47 |
| Msa0746340 | Msa0793270 | 0.827451 | 1.552837e-54 | -8.615850e-47 |
| Msa0746340 | Msa0795320 | 0.852968 | 3.258726e-61 | -8.615850e-47 |
| Msa0746340 | Msa0804870 | 0.842088 | 3.200390e-58 | -8.615850e-47 |
| Msa0746340 | Msa0806910 | 0.800261 | 1.565768e-48 | -8.615850e-47 |
| Msa0746340 | Msa0816630 | 0.832085 | 1.155780e-55 | -8.615850e-47 |
| Msa0746340 | Msa0820880 | 0.874008 | 9.447860e-68 | -8.615850e-47 |
| Msa0746340 | Msa0826240 | 0.801011 | 1.100798e-48 | -8.615850e-47 |
| Msa0746340 | Msa0826360 | 0.840482 | 8.465302e-58 | -8.615850e-47 |
| Msa0746340 | Msa0826370 | 0.854085 | 1.556469e-61 | -8.615850e-47 |
| Msa0746340 | Msa0826380 | 0.839120 | 1.915672e-57 | -8.615850e-47 |
| Msa0746340 | Msa0826450 | 0.850312 | 1.841664e-60 | -8.615850e-47 |
| Msa0746340 | Msa0832950 | 0.829812 | 4.173733e-55 | -8.615850e-47 |
| Msa0746340 | Msa0843740 | 0.814045 | 1.881934e-51 | -8.615850e-47 |
| Msa0746340 | Msa0848020 | 0.862966 | 3.483119e-64 | -8.615850e-47 |
| Msa0746340 | Msa0859040 | 0.866834 | 2.133378e-65 | -8.615850e-47 |
| Msa0746340 | Msa0863940 | 0.831646 | 1.483793e-55 | -8.615850e-47 |
| Msa0746340 | Msa0865810 | 0.860418 | 2.094913e-63 | -8.615850e-47 |
| Msa0746340 | Msa0865820 | 0.853537 | 2.238060e-61 | -8.615850e-47 |
| Msa0746340 | Msa0865830 | 0.853559 | 2.205118e-61 | -8.615850e-47 |
| Msa0746340 | Msa0874640 | 0.820842 | 5.540022e-53 | -8.615850e-47 |
| Msa0746340 | Msa0879940 | -0.807131 | 5.872784e-50 | -8.615850e-47 |
| Msa0746340 | Msa0921790 | 0.811541 | 6.649699e-51 | -8.615850e-47 |
| Msa0746340 | Msa0965780 | 0.817134 | 3.860322e-52 | -8.615850e-47 |
| Msa0746340 | Msa1000800 | 0.816201 | 6.247796e-52 | -8.615850e-47 |
| Msa0746340 | Msa1025750 | 0.815708 | 8.050683e-52 | -8.615850e-47 |
| Msa0746340 | Msa1026080 | 0.817018 | 4.099824e-52 | -8.615850e-47 |
| Msa0746340 | Msa1026890 | 0.828357 | 9.401680e-55 | -8.615850e-47 |
| Msa0746340 | Msa1027910 | 0.862911 | 3.622370e-64 | -8.615850e-47 |
| Msa0746340 | Msa1030210 | 0.871388 | 7.101591e-67 | -8.615850e-47 |
| Msa0746340 | Msa1031780 | 0.801238 | 9.894634e-49 | -8.615850e-47 |
| Msa0746340 | Msa1061840 | 0.808649 | 2.792414e-50 | -8.615850e-47 |
| Msa0746340 | Msa1064240 | 0.850821 | 1.325073e-60 | -8.615850e-47 |
| Msa0746340 | Msa1069250 | 0.869130 | 3.899835e-66 | -8.615850e-47 |
| Msa0746340 | Msa1075090 | 0.801282 | 9.693134e-49 | -8.615850e-47 |
| Msa0746340 | Msa1080820 | 0.800980 | 1.117423e-48 | -8.615850e-47 |
| Msa0746340 | Msa1082600 | 0.800575 | 1.351428e-48 | -8.615850e-47 |
| Msa0746340 | Msa1084890 | 0.839803 | 1.273794e-57 | -8.615850e-47 |
| Msa0746340 | Msa1102210 | 0.826328 | 2.880779e-54 | -8.615850e-47 |
| Msa0746340 | Msa1105360 | 0.807562 | 4.756817e-50 | -8.615850e-47 |
| Msa0746340 | Msa1110900 | 0.823078 | 1.680863e-53 | -8.615850e-47 |
| Msa0746340 | Msa1111860 | 0.823388 | 1.423176e-53 | -8.615850e-47 |
| Msa0746340 | Msa1117770 | -0.814241 | 1.702697e-51 | -8.615850e-47 |
| Msa0746340 | Msa1118960 | 0.803470 | 3.432837e-49 | -8.615850e-47 |
| Msa0746340 | Msa1120580 | 0.849642 | 2.837218e-60 | -8.615850e-47 |
| Msa0746340 | Msa1127360 | 0.801662 | 8.100571e-49 | -8.615850e-47 |
| Msa0746340 | Msa1137750 | 0.822638 | 2.128106e-53 | -8.615850e-47 |
| Msa0746340 | Msa1142390 | 0.801116 | 1.047789e-48 | -8.615850e-47 |
| Msa0746340 | Msa1154240 | 0.848261 | 6.861932e-60 | -8.615850e-47 |
| Msa0746340 | Msa1157110 | 0.858947 | 5.805703e-63 | -8.615850e-47 |
| Msa0746340 | Msa1157200 | 0.814607 | 1.413465e-51 | -8.615850e-47 |
| Msa0746340 | Msa1174280 | 0.826531 | 2.577334e-54 | -8.615850e-47 |
| Msa0746340 | Msa1184400 | 0.878000 | 4.000430e-69 | -8.615850e-47 |
| Msa0746340 | Msa1202110 | 0.835574 | 1.550486e-56 | -8.615850e-47 |
| Msa0746340 | Msa1208840 | 0.816798 | 4.592217e-52 | -8.615850e-47 |
| Msa0746340 | Msa1211610 | 0.873567 | 1.330863e-67 | -8.615850e-47 |
| Msa0746340 | Msa1217260 | 0.811410 | 7.100213e-51 | -8.615850e-47 |
| Msa0746340 | Msa1223560 | 0.884436 | 1.921378e-71 | -8.615850e-47 |
| Msa0746340 | Msa1224510 | 0.995640 | 2.489648e-218 | -8.615850e-47 |
| Msa0746340 | Msa1239190 | 0.804095 | 2.545999e-49 | -8.615850e-47 |
| Msa0746340 | Msa1245890 | 0.829701 | 4.442089e-55 | -8.615850e-47 |
| Msa0746340 | Msa1254870 | 0.835400 | 1.715777e-56 | -8.615850e-47 |
| Msa0746340 | Msa1256600 | 0.933936 | 8.752474e-96 | -8.615850e-47 |
| Msa0746340 | Msa1259030 | 0.827696 | 1.356386e-54 | -8.615850e-47 |
| Msa0746340 | Msa1262540 | 0.824275 | 8.818523e-54 | -8.615850e-47 |
| Msa0746340 | Msa1263500 | 0.873278 | 1.664900e-67 | -8.615850e-47 |
| Msa0746340 | Msa1299480 | 0.876326 | 1.526438e-68 | -8.615850e-47 |
| Msa0746340 | Msa1307930 | 0.873944 | 9.927340e-68 | -8.615850e-47 |
| Msa0746340 | Msa1322180 | 0.808471 | 3.047955e-50 | -8.615850e-47 |
| Msa0746340 | Msa1328430 | 0.836787 | 7.627051e-57 | -8.615850e-47 |
| Msa0746340 | Msa1333700 | 0.981773 | 2.058905e-153 | -8.615850e-47 |
| Msa0746340 | Msa1344330 | 0.802496 | 5.458879e-49 | -8.615850e-47 |
| Msa0746340 | Msa1349830 | 0.874965 | 4.468360e-68 | -8.615850e-47 |
| Msa0746340 | Msa1359770 | 0.809441 | 1.888976e-50 | -8.615850e-47 |
| Msa0746340 | Msa1369320 | 0.800147 | 1.651914e-48 | -8.615850e-47 |
| Msa0746340 | Msa1369450 | 0.866744 | 2.279003e-65 | -8.615850e-47 |
| Msa0746340 | Msa1373060 | 0.808233 | 3.425668e-50 | -8.615850e-47 |
| Msa0746340 | Msa1377050 | 0.872155 | 3.951350e-67 | -8.615850e-47 |
| Msa0746340 | Msa1383790 | 0.803149 | 4.000231e-49 | -8.615850e-47 |
| Msa0746340 | Msa1387610 | 0.889090 | 3.305655e-73 | -8.615850e-47 |
| Msa0746340 | Msa1395250 | 0.807947 | 3.941125e-50 | -8.615850e-47 |
| Msa0746340 | Msa1396160 | 0.805172 | 1.517568e-49 | -8.615850e-47 |
| Msa0746340 | Msa1398120 | 0.857036 | 2.144924e-62 | -8.615850e-47 |
| Msa0746340 | Msa1398320 | 0.822066 | 2.889568e-53 | -8.615850e-47 |
| Msa0746340 | Msa1399930 | 0.849058 | 4.125479e-60 | -8.615850e-47 |
| Msa0746340 | Msa1401110 | 0.836821 | 7.472628e-57 | -8.615850e-47 |
| Msa0746340 | Msa1405500 | 0.849247 | 3.654640e-60 | -8.615850e-47 |
| Msa0746340 | Msa1410500 | -0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa0746340 | Msa1413800 | 0.814140 | 1.792510e-51 | -8.615850e-47 |
| Msa0746340 | Msa1419200 | 0.833981 | 3.902246e-56 | -8.615850e-47 |
| Msa0746340 | Msa1422230 | 0.855735 | 5.166373e-62 | -8.615850e-47 |
| Msa0746340 | Msa1427000 | 0.841114 | 5.781065e-58 | -8.615850e-47 |
| Msa0746340 | Msa1435320 | 0.863525 | 2.339596e-64 | -8.615850e-47 |
| Msa0746340 | Msa1436090 | 0.811560 | 6.587277e-51 | -8.615850e-47 |
| Msa0746340 | Msa1438160 | 0.858742 | 6.685797e-63 | -8.615850e-47 |
| Msa0746340 | Msa1439780 | 0.834739 | 2.517599e-56 | -8.615850e-47 |
| Msa0746340 | Msa1443400 | 0.862909 | 3.628996e-64 | -8.615850e-47 |
| Msa0746340 | Msa1448040 | 0.862141 | 6.253312e-64 | -8.615850e-47 |
| Msa0746340 | Msa1449470 | 0.886628 | 2.897521e-72 | -8.615850e-47 |
| Msa0746340 | Msa1453600 | 0.840943 | 6.411113e-58 | -8.615850e-47 |
| Msa0746340 | Msa1456000 | 0.804967 | 1.675053e-49 | -8.615850e-47 |
| Msa0746340 | Msa1459920 | 0.845647 | 3.563816e-59 | -8.615850e-47 |
| Msa0746340 | Msa1459930 | 0.844527 | 7.156200e-59 | -8.615850e-47 |
| Msa0129290 | Msa0746340 | 0.811524 | 6.707715e-51 | -8.615850e-47 |
| Msa0129770 | Msa0746340 | 0.803273 | 3.771702e-49 | -8.615850e-47 |
| Msa0136240 | Msa0746340 | 0.836808 | 7.529959e-57 | -8.615850e-47 |
| Msa0143640 | Msa0746340 | 0.873978 | 9.664948e-68 | -8.615850e-47 |
| Msa0143830 | Msa0746340 | 0.834767 | 2.477820e-56 | -8.615850e-47 |
| Msa0146090 | Msa0746340 | 0.843994 | 9.950523e-59 | -8.615850e-47 |
| Msa0146200 | Msa0746340 | 0.874582 | 6.034376e-68 | -8.615850e-47 |
| Msa0150620 | Msa0746340 | 0.829518 | 4.923420e-55 | -8.615850e-47 |
| Msa0162680 | Msa0746340 | 0.857257 | 1.846308e-62 | -8.615850e-47 |
| Msa0185100 | Msa0746340 | 0.828716 | 7.700328e-55 | -8.615850e-47 |
| Msa0186240 | Msa0746340 | 0.813214 | 2.866237e-51 | -8.615850e-47 |
| Msa0191470 | Msa0746340 | 0.818423 | 1.975711e-52 | -8.615850e-47 |
| Msa0193190 | Msa0746340 | 0.806384 | 8.445340e-50 | -8.615850e-47 |
| Msa0202380 | Msa0746340 | 0.821068 | 4.915045e-53 | -8.615850e-47 |
| Msa0203090 | Msa0746340 | 0.800755 | 1.241900e-48 | -8.615850e-47 |
| Msa0204170 | Msa0746340 | 0.839476 | 1.548972e-57 | -8.615850e-47 |
| Msa0224210 | Msa0746340 | 0.824367 | 8.390052e-54 | -8.615850e-47 |
| Msa0234740 | Msa0746340 | 0.802735 | 4.872475e-49 | -8.615850e-47 |
| Msa0238710 | Msa0746340 | 0.843666 | 1.217671e-58 | -8.615850e-47 |
| Msa0370360 | Msa0746340 | 0.844616 | 6.771549e-59 | -8.615850e-47 |
| Msa0375920 | Msa0746340 | 0.800351 | 1.500900e-48 | -8.615850e-47 |
| Msa0383900 | Msa0746340 | 0.813772 | 2.161256e-51 | -8.615850e-47 |
| Msa0385320 | Msa0746340 | 0.821364 | 4.200246e-53 | -8.615850e-47 |
| Msa0390200 | Msa0746340 | 0.818153 | 2.273547e-52 | -8.615850e-47 |
| Msa0390790 | Msa0746340 | 0.827525 | 1.491245e-54 | -8.615850e-47 |
| Msa0393100 | Msa0746340 | 0.859382 | 4.300860e-63 | -8.615850e-47 |
| Msa0400010 | Msa0746340 | 0.801603 | 8.329578e-49 | -8.615850e-47 |
| Msa0402800 | Msa0746340 | 0.850817 | 1.328308e-60 | -8.615850e-47 |
| Msa0417860 | Msa0746340 | 0.815880 | 7.369166e-52 | -8.615850e-47 |
| Msa0421080 | Msa0746340 | 0.831334 | 1.771045e-55 | -8.615850e-47 |
| Msa0429840 | Msa0746340 | 0.813977 | 1.947498e-51 | -8.615850e-47 |
| Msa0429910 | Msa0746340 | 0.812692 | 3.730145e-51 | -8.615850e-47 |
| Msa0434300 | Msa0746340 | 0.812421 | 4.275876e-51 | -8.615850e-47 |
| Msa0434400 | Msa0746340 | 0.818593 | 1.807658e-52 | -8.615850e-47 |
| Msa0438070 | Msa0746340 | 0.874767 | 5.220113e-68 | -8.615850e-47 |
| Msa0443450 | Msa0746340 | 0.829926 | 3.916085e-55 | -8.615850e-47 |
| Msa0447160 | Msa0746340 | 0.807768 | 4.300585e-50 | -8.615850e-47 |
| Msa0449620 | Msa0746340 | 0.825006 | 5.929295e-54 | -8.615850e-47 |
| Msa0464360 | Msa0746340 | 0.826815 | 2.204727e-54 | -8.615850e-47 |
| Msa0466850 | Msa0746340 | 0.815859 | 7.450654e-52 | -8.615850e-47 |
| Msa0476770 | Msa0746340 | 0.803849 | 2.865086e-49 | -8.615850e-47 |
| Msa0478080 | Msa0746340 | 0.803803 | 2.928876e-49 | -8.615850e-47 |
| Msa0480530 | Msa0746340 | 0.819611 | 1.060346e-52 | -8.615850e-47 |
| Msa0480540 | Msa0746340 | 0.861248 | 1.172677e-63 | -8.615850e-47 |
| Msa0480550 | Msa0746340 | 0.875581 | 2.752516e-68 | -8.615850e-47 |
| Msa0481770 | Msa0746340 | 0.838912 | 2.169485e-57 | -8.615850e-47 |
| Msa0246140 | Msa0746340 | 0.847630 | 1.024210e-59 | -8.615850e-47 |
| Msa0254640 | Msa0746340 | 0.826753 | 2.282187e-54 | -8.615850e-47 |
| Msa0265480 | Msa0746340 | 0.816641 | 4.979102e-52 | -8.615850e-47 |
| Msa0267900 | Msa0746340 | 0.860088 | 2.635021e-63 | -8.615850e-47 |
| Msa0271700 | Msa0746340 | 0.803677 | 3.109730e-49 | -8.615850e-47 |
| Msa0271720 | Msa0746340 | 0.804403 | 2.196584e-49 | -8.615850e-47 |
| Msa0273070 | Msa0746340 | 0.818475 | 1.922606e-52 | -8.615850e-47 |
| Msa0275730 | Msa0746340 | 0.800547 | 1.369058e-48 | -8.615850e-47 |
| Msa0284730 | Msa0746340 | 0.815385 | 9.497149e-52 | -8.615850e-47 |
| Msa0306310 | Msa0746340 | 0.871205 | 8.162461e-67 | -8.615850e-47 |
| Msa0307350 | Msa0746340 | 0.809944 | 1.473022e-50 | -8.615850e-47 |
| Msa0312300 | Msa0746340 | 0.815046 | 1.129652e-51 | -8.615850e-47 |
| Msa0316470 | Msa0746340 | 0.814286 | 1.664944e-51 | -8.615850e-47 |
| Msa0319680 | Msa0746340 | 0.838511 | 2.754287e-57 | -8.615850e-47 |
| Msa0324810 | Msa0746340 | 0.818497 | 1.901004e-52 | -8.615850e-47 |
| Msa0324840 | Msa0746340 | 0.846696 | 1.846964e-59 | -8.615850e-47 |
| Msa0332360 | Msa0746340 | 0.819895 | 9.133451e-53 | -8.615850e-47 |
| Msa0336550 | Msa0746340 | -0.800804 | 1.213470e-48 | -8.615850e-47 |
| Msa0340370 | Msa0746340 | 0.837894 | 3.970132e-57 | -8.615850e-47 |
| Msa0345980 | Msa0746340 | 0.845115 | 4.965058e-59 | -8.615850e-47 |
| Msa0348460 | Msa0746340 | 0.813034 | 3.139931e-51 | -8.615850e-47 |
| Msa0353010 | Msa0746340 | 0.807518 | 4.860393e-50 | -8.615850e-47 |
| Msa0482820 | Msa0746340 | 0.822343 | 2.492836e-53 | -8.615850e-47 |
| Msa0488580 | Msa0746340 | 0.857748 | 1.320854e-62 | -8.615850e-47 |
| Msa0493870 | Msa0746340 | 0.814303 | 1.649790e-51 | -8.615850e-47 |
| Msa0497690 | Msa0746340 | 0.801695 | 7.976803e-49 | -8.615850e-47 |
| Msa0497860 | Msa0746340 | 0.859426 | 4.170406e-63 | -8.615850e-47 |
| Msa0500770 | Msa0746340 | 0.867068 | 1.796351e-65 | -8.615850e-47 |
| Msa0500910 | Msa0746340 | 0.817439 | 3.296338e-52 | -8.615850e-47 |
| Msa0506370 | Msa0746340 | 0.816079 | 6.654311e-52 | -8.615850e-47 |
| Msa0508160 | Msa0746340 | 0.818952 | 1.498386e-52 | -8.615850e-47 |
| Msa0513670 | Msa0746340 | 0.814961 | 1.180181e-51 | -8.615850e-47 |
| Msa0522140 | Msa0746340 | 0.810221 | 1.283598e-50 | -8.615850e-47 |
| Msa0522170 | Msa0746340 | 0.815091 | 1.103841e-51 | -8.615850e-47 |
| Msa0523080 | Msa0746340 | 0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0534610 | Msa0746340 | 0.819236 | 1.291549e-52 | -8.615850e-47 |
| Msa0550550 | Msa0746340 | 0.832802 | 7.676826e-56 | -8.615850e-47 |
| Msa0550560 | Msa0746340 | 0.820576 | 6.376937e-53 | -8.615850e-47 |
| Msa0550980 | Msa0746340 | -0.822294 | 2.557840e-53 | -8.615850e-47 |
| Msa0554770 | Msa0746340 | -0.816771 | 4.655835e-52 | -8.615850e-47 |
| Msa0558510 | Msa0746340 | 0.808061 | 3.725973e-50 | -8.615850e-47 |
| Msa0560280 | Msa0746340 | 0.807052 | 6.100827e-50 | -8.615850e-47 |
| Msa0562580 | Msa0746340 | 0.803923 | 2.765225e-49 | -8.615850e-47 |
| Msa0565120 | Msa0746340 | 0.805657 | 1.200892e-49 | -8.615850e-47 |
| Msa0566530 | Msa0746340 | 0.818671 | 1.735934e-52 | -8.615850e-47 |
| Msa0568110 | Msa0746340 | 0.840528 | 8.236009e-58 | -8.615850e-47 |
| Msa0570460 | Msa0746340 | 0.854641 | 1.075437e-61 | -8.615850e-47 |
| Msa0572700 | Msa0746340 | 0.813834 | 2.093704e-51 | -8.615850e-47 |
| Msa0573950 | Msa0746340 | 0.821145 | 4.718561e-53 | -8.615850e-47 |
| Msa0576560 | Msa0746340 | 0.836334 | 9.947920e-57 | -8.615850e-47 |
| Msa0580840 | Msa0746340 | 0.870891 | 1.035755e-66 | -8.615850e-47 |
| Msa0585060 | Msa0746340 | 0.845925 | 2.995003e-59 | -8.615850e-47 |
| Msa0590810 | Msa0746340 | 0.819664 | 1.031219e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746340 | MtrunA17_Chr4g0076441 | 96.667 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 0.0 | 670 |
| Msa0746340 | MtrunA17_Chr2g0290661 | 81.553 | 309 | 57 | 0 | 2 | 310 | 7 | 315 | 0.0 | 514 |
| Msa0746340 | MtrunA17_Chr3g0102691 | 66.978 | 321 | 102 | 3 | 1 | 318 | 1 | 320 | 2.35e-164 | 462 |
| Msa0746340 | MtrunA17_Chr4g0075941 | 95.783 | 166 | 7 | 0 | 1 | 166 | 1 | 166 | 1.54e-115 | 331 |
| Msa0746340 | MtrunA17_Chr7g0236461 | 29.603 | 277 | 165 | 9 | 26 | 290 | 95 | 353 | 1.85e-21 | 95.1 |
| Msa0746340 | MtrunA17_Chr4g0035361 | 29.437 | 231 | 151 | 4 | 34 | 254 | 2 | 230 | 1.97e-21 | 94.7 |
| Msa0746340 | MtrunA17_Chr3g0144891 | 29.870 | 231 | 150 | 4 | 34 | 254 | 98 | 326 | 7.25e-21 | 93.2 |
| Msa0746340 | MtrunA17_Chr3g0144911 | 29.600 | 250 | 157 | 7 | 8 | 251 | 93 | 329 | 9.49e-20 | 89.4 |
| Msa0746340 | MtrunA17_Chr8g0369291 | 31.020 | 245 | 144 | 7 | 26 | 254 | 85 | 320 | 1.35e-19 | 89.7 |
| Msa0746340 | MtrunA17_Chr5g0399151 | 29.493 | 217 | 143 | 4 | 26 | 236 | 110 | 322 | 3.99e-19 | 87.8 |
| Msa0746340 | MtrunA17_Chr3g0141821 | 28.364 | 275 | 159 | 10 | 1 | 260 | 59 | 310 | 6.92e-19 | 87.4 |
| Msa0746340 | MtrunA17_Chr4g0035391 | 28.708 | 209 | 141 | 3 | 34 | 236 | 108 | 314 | 1.47e-18 | 86.7 |
| Msa0746340 | MtrunA17_Chr8g0372651 | 29.741 | 232 | 142 | 7 | 34 | 250 | 80 | 305 | 5.29e-18 | 84.7 |
| Msa0746340 | MtrunA17_Chr1g0155521 | 30.047 | 213 | 133 | 4 | 34 | 236 | 113 | 319 | 5.47e-18 | 84.7 |
| Msa0746340 | MtrunA17_Chr5g0404711 | 28.326 | 233 | 145 | 6 | 34 | 251 | 77 | 302 | 6.58e-18 | 84.3 |
| Msa0746340 | MtrunA17_Chr3g0080051 | 28.326 | 233 | 153 | 6 | 26 | 251 | 97 | 322 | 1.33e-15 | 77.8 |
| Msa0746340 | MtrunA17_Chr1g0161441 | 26.923 | 208 | 124 | 8 | 27 | 225 | 25 | 213 | 5.96e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746340 | AT1G55840.1 | 64.596 | 322 | 110 | 2 | 2 | 322 | 7 | 325 | 5.09e-165 | 462 |
| Msa0746340 | AT5G47730.4 | 70.550 | 309 | 89 | 1 | 2 | 310 | 7 | 313 | 5.50e-165 | 463 |
| Msa0746340 | AT5G47730.1 | 70.550 | 309 | 89 | 1 | 2 | 310 | 7 | 313 | 5.50e-165 | 463 |
| Msa0746340 | AT1G55840.2 | 67.333 | 300 | 94 | 2 | 24 | 322 | 2 | 298 | 1.39e-159 | 448 |
| Msa0746340 | AT5G47730.2 | 74.231 | 260 | 65 | 1 | 51 | 310 | 1 | 258 | 1.58e-142 | 404 |
| Msa0746340 | AT5G47730.3 | 74.231 | 260 | 65 | 1 | 51 | 310 | 1 | 258 | 1.58e-142 | 404 |
| Msa0746340 | AT4G39180.3 | 29.195 | 298 | 176 | 9 | 34 | 310 | 97 | 380 | 4.88e-23 | 100 |
| Msa0746340 | AT4G39180.2 | 29.195 | 298 | 176 | 9 | 34 | 310 | 97 | 380 | 4.88e-23 | 100 |
| Msa0746340 | AT4G39180.1 | 32.340 | 235 | 139 | 5 | 34 | 254 | 97 | 325 | 1.02e-22 | 99.0 |
| Msa0746340 | AT3G24840.7 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 9.93e-22 | 96.3 |
| Msa0746340 | AT3G24840.3 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 9.93e-22 | 96.3 |
| Msa0746340 | AT3G24840.5 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 9.93e-22 | 96.3 |
| Msa0746340 | AT3G24840.1 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 1.10e-21 | 96.3 |
| Msa0746340 | AT3G24840.6 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 1.10e-21 | 96.3 |
| Msa0746340 | AT3G24840.4 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 1.10e-21 | 96.3 |
| Msa0746340 | AT3G24840.2 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 1.10e-21 | 96.3 |
| Msa0746340 | AT4G34580.2 | 28.685 | 251 | 161 | 5 | 14 | 254 | 75 | 317 | 3.35e-21 | 94.7 |
| Msa0746340 | AT4G34580.1 | 28.685 | 251 | 161 | 5 | 14 | 254 | 75 | 317 | 3.35e-21 | 94.7 |
| Msa0746340 | AT2G21540.3 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 6.65e-21 | 94.0 |
| Msa0746340 | AT2G21540.5 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 6.65e-21 | 94.0 |
| Msa0746340 | AT5G47510.2 | 30.043 | 233 | 141 | 6 | 34 | 260 | 52 | 268 | 6.83e-21 | 92.4 |
| Msa0746340 | AT2G21540.6 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 7.54e-21 | 93.6 |
| Msa0746340 | AT2G21540.2 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 7.54e-21 | 93.6 |
| Msa0746340 | AT2G21540.1 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 7.54e-21 | 93.6 |
| Msa0746340 | AT2G21540.4 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 7.54e-21 | 93.6 |
| Msa0746340 | AT5G47510.4 | 30.043 | 233 | 141 | 6 | 34 | 260 | 52 | 268 | 8.32e-21 | 92.4 |
| Msa0746340 | AT5G47510.1 | 30.043 | 233 | 141 | 6 | 34 | 260 | 51 | 267 | 8.32e-21 | 92.4 |
| Msa0746340 | AT4G36490.1 | 30.172 | 232 | 142 | 6 | 34 | 251 | 79 | 304 | 5.13e-20 | 91.3 |
| Msa0746340 | AT2G18180.2 | 30.213 | 235 | 144 | 5 | 34 | 254 | 82 | 310 | 5.55e-20 | 90.9 |
| Msa0746340 | AT2G18180.3 | 30.472 | 233 | 142 | 5 | 36 | 254 | 13 | 239 | 6.25e-20 | 90.9 |
| Msa0746340 | AT2G18180.4 | 30.472 | 233 | 142 | 5 | 36 | 254 | 13 | 239 | 6.31e-20 | 90.5 |
| Msa0746340 | AT2G18180.1 | 30.213 | 235 | 144 | 5 | 34 | 254 | 82 | 310 | 6.41e-20 | 90.9 |
| Msa0746340 | AT2G16380.2 | 29.362 | 235 | 146 | 5 | 34 | 254 | 89 | 317 | 7.03e-20 | 90.9 |
| Msa0746340 | AT2G16380.1 | 29.362 | 235 | 146 | 5 | 34 | 254 | 89 | 317 | 7.03e-20 | 90.9 |
| Msa0746340 | AT2G21520.2 | 29.464 | 224 | 147 | 4 | 34 | 251 | 115 | 333 | 1.24e-19 | 90.1 |
| Msa0746340 | AT2G21520.3 | 29.464 | 224 | 147 | 4 | 34 | 251 | 115 | 333 | 1.24e-19 | 90.1 |
| Msa0746340 | AT2G21520.1 | 29.464 | 224 | 147 | 4 | 34 | 251 | 111 | 329 | 1.26e-19 | 90.1 |
| Msa0746340 | AT1G19650.3 | 28.309 | 272 | 157 | 8 | 14 | 250 | 62 | 330 | 2.47e-19 | 88.6 |
| Msa0746340 | AT1G19650.1 | 28.309 | 272 | 157 | 8 | 14 | 250 | 62 | 330 | 3.74e-19 | 88.6 |
| Msa0746340 | AT1G19650.2 | 30.131 | 229 | 148 | 5 | 33 | 251 | 32 | 258 | 7.56e-19 | 87.8 |
| Msa0746340 | AT4G39170.2 | 28.947 | 228 | 143 | 5 | 34 | 251 | 109 | 327 | 1.31e-18 | 87.0 |
| Msa0746340 | AT4G39170.1 | 28.947 | 228 | 143 | 5 | 34 | 251 | 109 | 327 | 1.42e-18 | 87.0 |
| Msa0746340 | AT5G47510.3 | 28.761 | 226 | 139 | 6 | 41 | 260 | 2 | 211 | 1.16e-17 | 82.8 |
| Msa0746340 | AT1G75370.2 | 27.273 | 231 | 156 | 4 | 34 | 254 | 114 | 342 | 1.24e-16 | 81.3 |
| Msa0746340 | AT1G75370.1 | 27.273 | 231 | 156 | 4 | 34 | 254 | 114 | 342 | 1.35e-16 | 80.9 |
| Msa0746340 | AT5G56160.2 | 27.338 | 278 | 185 | 8 | 8 | 272 | 69 | 342 | 7.44e-16 | 78.6 |
| Msa0746340 | AT5G56160.1 | 27.338 | 278 | 185 | 8 | 8 | 272 | 69 | 342 | 8.22e-16 | 78.6 |
| Msa0746340 | AT5G56160.3 | 27.338 | 278 | 185 | 8 | 8 | 272 | 69 | 342 | 8.22e-16 | 78.6 |
| Msa0746340 | AT1G55690.2 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.97e-15 | 77.4 |
| Msa0746340 | AT1G55690.4 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.97e-15 | 77.4 |
| Msa0746340 | AT1G55690.1 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.97e-15 | 77.4 |
| Msa0746340 | AT1G55690.5 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.97e-15 | 77.4 |
| Msa0746340 | AT1G55690.3 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.98e-15 | 77.4 |
| Msa0746340 | AT2G18180.5 | 28.440 | 218 | 136 | 5 | 51 | 254 | 1 | 212 | 1.39e-14 | 74.7 |
| Msa0746340 | AT2G16380.3 | 27.523 | 218 | 138 | 5 | 51 | 254 | 1 | 212 | 5.78e-14 | 72.8 |
| Msa0746340 | AT1G01630.1 | 27.322 | 183 | 113 | 7 | 34 | 213 | 53 | 218 | 1.05e-11 | 64.7 |
Find 112 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAAATCAGCAGGAATAAT+TGG | 0.243946 | 5_1:+68468589 | None:intergenic |
| GAGTTAGGCCTTTAGTAGTA+TGG | 0.265480 | 5_1:-68465631 | Msa0746340:three_prime_UTR |
| CTCAACTCAAAGCAATAAAA+TGG | 0.272672 | 5_1:-68469123 | Msa0746340:exon |
| CCTAACCTTGAATGGAAATA+AGG | 0.294757 | 5_1:-68465900 | Msa0746340:CDS |
| ACCCCAAACTTGTAGAAAAC+TGG | 0.309056 | 5_1:-68465745 | Msa0746340:three_prime_UTR |
| GTATCCACATCCGGAGGTTC+TGG | 0.320907 | 5_1:+68465959 | None:intergenic |
| AAGGGATTGGGATCCTTCTA+AGG | 0.324848 | 5_1:-68468885 | Msa0746340:CDS |
| GGATGTGTAAAGTTTGTATT+AGG | 0.326034 | 5_1:-68465415 | Msa0746340:three_prime_UTR |
| GGTCTTCCTGTCTTTGCAAT+TGG | 0.327042 | 5_1:-68468413 | Msa0746340:CDS |
| TAGTTTAACAACTCAATAAA+AGG | 0.331126 | 5_1:-68465811 | Msa0746340:three_prime_UTR |
| ATTCGTTAATTTGTAGAGTT+AGG | 0.342021 | 5_1:-68465646 | Msa0746340:three_prime_UTR |
| TAATTCCTGCAACTGATTCA+TGG | 0.344567 | 5_1:+68469097 | None:intergenic |
| AGAAAAGTGCAGGTCTTATC+AGG | 0.347127 | 5_1:-68467452 | Msa0746340:CDS |
| GATTCAAGGCCGAGAGCTTC+AGG | 0.351238 | 5_1:+68468049 | None:intergenic |
| AGTTGATTGATTGTTTAAAC+TGG | 0.352364 | 5_1:-68468734 | Msa0746340:CDS |
| CTCGGCCTTGAATCACATTA+AGG | 0.354278 | 5_1:-68468040 | Msa0746340:intron |
| GGCTTGAGCCGTCTTGGATT+AGG | 0.362583 | 5_1:+68465847 | None:intergenic |
| TGCAACAGCTTCACGGAGTC+TGG | 0.368534 | 5_1:+68466015 | None:intergenic |
| TTGTTCCTTATTTCCATTCA+AGG | 0.371242 | 5_1:+68465895 | None:intergenic |
| CCTGTCTTTGCAATTGGTGT+TGG | 0.372437 | 5_1:-68468407 | Msa0746340:CDS |
| ACCATTTGATAAGCCTTAGA+AGG | 0.373448 | 5_1:+68468872 | None:intergenic |
| CAACAAGCTGAAAATATGTA+TGG | 0.379181 | 5_1:+68467651 | None:intergenic |
| ATAAGGAACAATTGAACAAT+TGG | 0.379476 | 5_1:-68465883 | Msa0746340:CDS |
| GAAAATTATATTGAGATGAA+TGG | 0.383349 | 5_1:-68465331 | Msa0746340:three_prime_UTR |
| CCTTATTTCCATTCAAGGTT+AGG | 0.386830 | 5_1:+68465900 | None:intergenic |
| TAACAATACTGATAGATATC+TGG | 0.387001 | 5_1:-68465526 | Msa0746340:three_prime_UTR |
| ACCTTTACACAAGTGGTAAT+AGG | 0.387066 | 5_1:+68468087 | None:intergenic |
| TTTGATAGCCTAACCTTGAA+TGG | 0.388252 | 5_1:-68465908 | Msa0746340:CDS |
| GCTCTCAATGATTTCATGAT+AGG | 0.398756 | 5_1:-68465718 | Msa0746340:three_prime_UTR |
| TTGCCCTAGGCAGTAAGGTT+TGG | 0.398802 | 5_1:-68465392 | Msa0746340:three_prime_UTR |
| TCACAACTCATTGGATTGTC+CGG | 0.400882 | 5_1:-68468550 | Msa0746340:CDS |
| GCTTCCACCTTCTGAATGTC+TGG | 0.409269 | 5_1:+68466102 | None:intergenic |
| TGATTGAAGTAATCTATCTA+TGG | 0.422925 | 5_1:+68469214 | None:intergenic |
| TGTGAGACTGCACATAATAA+TGG | 0.425984 | 5_1:+68468262 | None:intergenic |
| TTCCCTCTCCATACTACTAA+AGG | 0.427687 | 5_1:+68465623 | None:intergenic |
| GCTTTCTAAAAGCAAGGGAT+TGG | 0.428984 | 5_1:-68468898 | Msa0746340:CDS |
| CTTTCTAAAAGCAAGGGATT+GGG | 0.432846 | 5_1:-68468897 | Msa0746340:CDS |
| GGATTCCATGAATCAGTTGC+AGG | 0.433771 | 5_1:-68469102 | Msa0746340:CDS |
| GATGGTGGCTTGAGCCGTCT+TGG | 0.438882 | 5_1:+68465841 | None:intergenic |
| ATACGTGATTCACAACTCAT+TGG | 0.449153 | 5_1:-68468559 | Msa0746340:CDS |
| GCCTATTACCACTTGTGTAA+AGG | 0.454247 | 5_1:-68468088 | Msa0746340:CDS |
| TTCTGTAGAAAAGAAGGCTC+TGG | 0.457102 | 5_1:-68466130 | Msa0746340:CDS |
| ATGAAATGATCCCTGCTTGA+TGG | 0.479907 | 5_1:+68465991 | None:intergenic |
| CCACATTTCTGTAGAAAAGA+AGG | 0.481927 | 5_1:-68466136 | Msa0746340:CDS |
| CCCCAAACTTGTAGAAAACT+GGG | 0.483726 | 5_1:-68465744 | Msa0746340:three_prime_UTR |
| AGGTACCTTAATGTGATTCA+AGG | 0.487226 | 5_1:+68468035 | None:intergenic |
| TCCTTCTAAGGCTTATCAAA+TGG | 0.487749 | 5_1:-68468873 | Msa0746340:intron |
| CCTGAAAAGTTGTCTGCAAT+GGG | 0.500033 | 5_1:+68469057 | None:intergenic |
| ATATCGCGATCGTGTAATCT+TGG | 0.500716 | 5_1:-68468226 | Msa0746340:intron |
| ACCTGAAAAGTTGTCTGCAA+TGG | 0.500831 | 5_1:+68469056 | None:intergenic |
| GAGCATACCCTTCCCAAGAA+AGG | 0.500885 | 5_1:+68465587 | None:intergenic |
| GTCTAAAACCTTTACACAAG+TGG | 0.503259 | 5_1:+68468080 | None:intergenic |
| AGCTGTTGCACCCATCAAGC+AGG | 0.504047 | 5_1:-68466002 | Msa0746340:CDS |
| TAGCAAGCGCGTTATACGTT+AGG | 0.504105 | 5_1:-68465436 | Msa0746340:three_prime_UTR |
| AAAACCAAACCTTACTGCCT+AGG | 0.504328 | 5_1:+68465388 | None:intergenic |
| TGTGGAATTTCCAGAACCTC+CGG | 0.505738 | 5_1:-68465969 | Msa0746340:CDS |
| CTTGTCCTCTCGTGTAAAAG+TGG | 0.505908 | 5_1:+68467476 | None:intergenic |
| AAGCGAGAACTGCTATTCCT+TGG | 0.507986 | 5_1:-68466083 | Msa0746340:CDS |
| AAATAAGTATGAGTCTTCTC+AGG | 0.511983 | 5_1:+68467687 | None:intergenic |
| GCAACCCTTGTATCCACATC+CGG | 0.513462 | 5_1:+68465950 | None:intergenic |
| ATTTCCAGAACCTCCGGATG+TGG | 0.516108 | 5_1:-68465963 | Msa0746340:CDS |
| TGATGGGTGCAACAGCTTCA+CGG | 0.519474 | 5_1:+68466008 | None:intergenic |
| GATAGGTCCTTTCTTGGGAA+GGG | 0.519490 | 5_1:-68465594 | Msa0746340:three_prime_UTR |
| AGGATAGTTGAGATCATCAA+TGG | 0.519931 | 5_1:+68467707 | None:intergenic |
| CACAACTCATTGGATTGTCC+GGG | 0.520676 | 5_1:-68468549 | Msa0746340:CDS |
| AACCTCCGGATGTGGATACA+AGG | 0.521017 | 5_1:-68465955 | Msa0746340:CDS |
| TTAGGTTGCCCTAGGCAGTA+AGG | 0.521543 | 5_1:-68465397 | Msa0746340:three_prime_UTR |
| AGATAGGTCCTTTCTTGGGA+AGG | 0.523771 | 5_1:-68465595 | Msa0746340:three_prime_UTR |
| AACAAGCTGAAAATATGTAT+GGG | 0.528848 | 5_1:+68467652 | None:intergenic |
| ATTGTTCTATATAAATCAGC+AGG | 0.538192 | 5_1:+68468580 | None:intergenic |
| TTAAACTAGTCTTCAGATGG+TGG | 0.542463 | 5_1:+68465826 | None:intergenic |
| TGAAATTAACACAGTCCTTG+TGG | 0.544715 | 5_1:+68465463 | None:intergenic |
| TAAAACAAGGAAGAAACAAA+GGG | 0.549490 | 5_1:-68465774 | Msa0746340:three_prime_UTR |
| GACTCGCTTTCTAAAAGCAA+GGG | 0.549883 | 5_1:-68468903 | Msa0746340:CDS |
| AGTTTGTATTAGGTTGCCCT+AGG | 0.555979 | 5_1:-68465405 | Msa0746340:three_prime_UTR |
| CCAACACCAATTGCAAAGAC+AGG | 0.557244 | 5_1:+68468407 | None:intergenic |
| CTAAAACAAGGAAGAAACAA+AGG | 0.557659 | 5_1:-68465775 | Msa0746340:three_prime_UTR |
| ATTGAGATGAATGGTTAAGC+CGG | 0.560469 | 5_1:-68465322 | Msa0746340:three_prime_UTR |
| GGCCTTTAGTAGTATGGAGA+GGG | 0.562694 | 5_1:-68465625 | Msa0746340:three_prime_UTR |
| GAGGACAAGAAGAAAAGTGC+AGG | 0.566912 | 5_1:-68467462 | Msa0746340:CDS |
| CCATGCTTCTTCGATGCAGA+AGG | 0.568603 | 5_1:+68468114 | None:intergenic |
| AATGATCAGAATGTTCATCA+AGG | 0.572623 | 5_1:-68468944 | Msa0746340:intron |
| TTGTTAAACTAGTCTTCAGA+TGG | 0.572957 | 5_1:+68465823 | None:intergenic |
| AAACCAAACCTTACTGCCTA+GGG | 0.576178 | 5_1:+68465389 | None:intergenic |
| TTGTAAAGCTGTTGGTGAAG+GGG | 0.576838 | 5_1:+68466055 | None:intergenic |
| GAACAATTGGACTAGAGCAC+AGG | 0.579823 | 5_1:-68465870 | Msa0746340:CDS |
| CATGACTGGCCTGAAGCTCT+CGG | 0.583248 | 5_1:-68468058 | Msa0746340:CDS |
| TTGGTGAAGGGGATGATCCA+AGG | 0.586370 | 5_1:+68466066 | None:intergenic |
| GTGCAGGTCTTATCAGGATG+CGG | 0.586473 | 5_1:-68467446 | Msa0746340:CDS |
| TGAAATGATCCCTGCTTGAT+GGG | 0.594800 | 5_1:+68465992 | None:intergenic |
| AGTTGTAAAGCTGTTGGTGA+AGG | 0.599771 | 5_1:+68466053 | None:intergenic |
| GAGCACCTCTCTTGTATACC+CGG | 0.601263 | 5_1:+68468531 | None:intergenic |
| CCTTCTGCATCGAAGAAGCA+TGG | 0.604202 | 5_1:-68468114 | Msa0746340:CDS |
| TGACTCGCTTTCTAAAAGCA+AGG | 0.605557 | 5_1:-68468904 | Msa0746340:CDS |
| TGATGTAGTTGTAAAGCTGT+TGG | 0.607103 | 5_1:+68466047 | None:intergenic |
| AGGCCTTTAGTAGTATGGAG+AGG | 0.610397 | 5_1:-68465626 | Msa0746340:three_prime_UTR |
| GTTGTAAAGCTGTTGGTGAA+GGG | 0.611186 | 5_1:+68466054 | None:intergenic |
| GCTGTTGCACCCATCAAGCA+GGG | 0.617758 | 5_1:-68466001 | Msa0746340:CDS |
| TCATCCAGACATTCAGAAGG+TGG | 0.620255 | 5_1:-68466106 | Msa0746340:CDS |
| CTTATCAGGATGCGGACGAG+AGG | 0.624579 | 5_1:-68467438 | Msa0746340:CDS |
| CTGCATCGAAGAAGCATGGA+CGG | 0.630026 | 5_1:-68468110 | Msa0746340:CDS |
| CAAGCAGGGATCATTTCATG+TGG | 0.642715 | 5_1:-68465987 | Msa0746340:CDS |
| AGCACAGGCCTAATCCAAGA+CGG | 0.643414 | 5_1:-68465855 | Msa0746340:exon |
| ACAAGCTGAAAATATGTATG+GGG | 0.656374 | 5_1:+68467653 | None:intergenic |
| GGATCATCCAGACATTCAGA+AGG | 0.659467 | 5_1:-68466109 | Msa0746340:CDS |
| ACCTCCGGATGTGGATACAA+GGG | 0.663935 | 5_1:-68465954 | Msa0746340:CDS |
| ATTGTCCGGGTATACAAGAG+AGG | 0.683235 | 5_1:-68468536 | Msa0746340:intron |
| AAACTTGTAGAAAACTGGGG+TGG | 0.683488 | 5_1:-68465740 | Msa0746340:three_prime_UTR |
| ACCCTTGTATCCACATCCGG+AGG | 0.690874 | 5_1:+68465953 | None:intergenic |
| AATGAAACGCTACTAAAACA+AGG | 0.692072 | 5_1:-68465787 | Msa0746340:three_prime_UTR |
| GAAAAGTTGTCTGCAATGGG+TGG | 0.699381 | 5_1:+68469060 | None:intergenic |
| CCCAAACTTGTAGAAAACTG+GGG | 0.717317 | 5_1:-68465743 | Msa0746340:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTAATAATAGCAT+TGG | - | chr5_1:68467084-68467103 | Msa0746340:intron | 10.0% |
| !! | AATGTTAAGATATATATTTA+CGG | + | chr5_1:68467966-68467985 | None:intergenic | 10.0% |
| !! | GAAGTATAATTAATATTAAT+AGG | + | chr5_1:68468045-68468064 | None:intergenic | 10.0% |
| !! | TGAATTTAACAAATTAAATT+TGG | - | chr5_1:68468452-68468471 | Msa0746340:intron | 10.0% |
| !! | AAACTTATAAAAAAATAGAG+GGG | + | chr5_1:68466006-68466025 | None:intergenic | 15.0% |
| !! | GAAACTTATAAAAAAATAGA+GGG | + | chr5_1:68466007-68466026 | None:intergenic | 15.0% |
| !! | AGAAACTTATAAAAAAATAG+AGG | + | chr5_1:68466008-68466027 | None:intergenic | 15.0% |
| !!! | AACATCTCTTTTTATTTTTT+TGG | + | chr5_1:68467035-68467054 | None:intergenic | 15.0% |
| !! | AAAAATGAGATCATTATAAA+CGG | + | chr5_1:68467344-68467363 | None:intergenic | 15.0% |
| !!! | TTTATAATGATCTCATTTTT+TGG | - | chr5_1:68467344-68467363 | Msa0746340:intron | 15.0% |
| !! | TACAGTAAATTAAATGTTAA+GGG | + | chr5_1:68467537-68467556 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTTTTTTTTTGAC+AGG | + | chr5_1:68467850-68467869 | None:intergenic | 15.0% |
| !!! | GACATTTTTCATAAAATTTT+TGG | - | chr5_1:68467877-68467896 | Msa0746340:intron | 15.0% |
| !! | AAACATACAAATATGACATA+AGG | + | chr5_1:68466351-68466370 | None:intergenic | 20.0% |
| !! | GAACAAAAAACTCAAATAAT+AGG | + | chr5_1:68466474-68466493 | None:intergenic | 20.0% |
| !! | TTCATGAAGCAATAAATTAA+GGG | + | chr5_1:68466829-68466848 | None:intergenic | 20.0% |
| !! | ATTCATGAAGCAATAAATTA+AGG | + | chr5_1:68466830-68466849 | None:intergenic | 20.0% |
| !! | AAAGAAATACAAGAACTTTA+TGG | + | chr5_1:68467500-68467519 | None:intergenic | 20.0% |
| !! | GTACAGTAAATTAAATGTTA+AGG | + | chr5_1:68467538-68467557 | None:intergenic | 20.0% |
| !!! | ACATTTAATTTACTGTACAT+TGG | - | chr5_1:68467540-68467559 | Msa0746340:intron | 20.0% |
| !!! | TTTTTCATAAAATTTTTGGC+TGG | - | chr5_1:68467881-68467900 | Msa0746340:intron | 20.0% |
| !! | TTTCATAAACAGATTTGAAT+GGG | + | chr5_1:68468268-68468287 | None:intergenic | 20.0% |
| !!! | TTTTCATAAACAGATTTGAA+TGG | + | chr5_1:68468269-68468288 | None:intergenic | 20.0% |
| !! | AATAAATACACTTATAGGAA+TGG | + | chr5_1:68468310-68468329 | None:intergenic | 20.0% |
| !! | ATTCCTATAAGTGTATTTAT+TGG | - | chr5_1:68468309-68468328 | Msa0746340:intron | 20.0% |
| !! | TAGTTTAACAACTCAATAAA+AGG | - | chr5_1:68468828-68468847 | Msa0746340:intron | 20.0% |
| !! | GAAAATTATATTGAGATGAA+TGG | - | chr5_1:68469308-68469327 | Msa0746340:intron | 20.0% |
| ! | TGATTGAAGTAATCTATCTA+TGG | + | chr5_1:68465428-68465447 | None:intergenic | 25.0% |
| ! | AGTTGATTGATTGTTTAAAC+TGG | - | chr5_1:68465905-68465924 | Msa0746340:CDS | 25.0% |
| ! | TATAAATCAGCAGGAATAAT+TGG | + | chr5_1:68466053-68466072 | None:intergenic | 25.0% |
| ! | ATTGTTCTATATAAATCAGC+AGG | + | chr5_1:68466062-68466081 | None:intergenic | 25.0% |
| ! | ATACAAATATGACATAAGGA+AGG | + | chr5_1:68466347-68466366 | None:intergenic | 25.0% |
| !! | TGTCATATTTGTATGTTTTC+AGG | - | chr5_1:68466353-68466372 | Msa0746340:intron | 25.0% |
| ! | TAAACAACTATTCAAGAATC+TGG | + | chr5_1:68466662-68466681 | None:intergenic | 25.0% |
| ! | AACAAGCTGAAAATATGTAT+GGG | + | chr5_1:68466990-68467009 | None:intergenic | 25.0% |
| ! | TGTTAACACTATACATTAAC+AGG | - | chr5_1:68467132-68467151 | Msa0746340:intron | 25.0% |
| !! | ATGCAATTATTACGATCTTT+TGG | + | chr5_1:68467381-68467400 | None:intergenic | 25.0% |
| !! | TAGTTTTCAACATATACGTT+TGG | - | chr5_1:68467716-68467735 | Msa0746340:CDS | 25.0% |
| !! | TTGCAATAAGATTAGTTGAA+TGG | + | chr5_1:68467809-68467828 | None:intergenic | 25.0% |
| ! | GTTAAGATATATATTTACGG+AGG | + | chr5_1:68467963-68467982 | None:intergenic | 25.0% |
| !! | TACTTGATCTTTTTAATCAG+TGG | + | chr5_1:68468218-68468237 | None:intergenic | 25.0% |
| ! | TTCATAAACAGATTTGAATG+GGG | + | chr5_1:68468267-68468286 | None:intergenic | 25.0% |
| ! | TCAAATCTGTTTATGAAAAG+CGG | - | chr5_1:68468270-68468289 | Msa0746340:intron | 25.0% |
| ! | GAACCAATAAATACACTTAT+AGG | + | chr5_1:68468315-68468334 | None:intergenic | 25.0% |
| !!! | AAATTTTGACTCTATAGTCT+TGG | + | chr5_1:68468714-68468733 | None:intergenic | 25.0% |
| ! | ATAAGGAACAATTGAACAAT+TGG | - | chr5_1:68468756-68468775 | Msa0746340:intron | 25.0% |
| ! | TAAAACAAGGAAGAAACAAA+GGG | - | chr5_1:68468865-68468884 | Msa0746340:intron | 25.0% |
| !!! | ATTCGTTAATTTGTAGAGTT+AGG | - | chr5_1:68468993-68469012 | Msa0746340:intron | 25.0% |
| ! | TAACAATACTGATAGATATC+TGG | - | chr5_1:68469113-68469132 | Msa0746340:exon | 25.0% |
| !! | TTTACTACTTCGATAGTTTT+TGG | + | chr5_1:68469147-68469166 | None:intergenic | 25.0% |
| CTCAACTCAAAGCAATAAAA+TGG | - | chr5_1:68465516-68465535 | Msa0746340:three_prime_UTR | 30.0% | |
| AATGATCAGAATGTTCATCA+AGG | - | chr5_1:68465695-68465714 | Msa0746340:three_prime_UTR | 30.0% | |
| ATAAATGTAAAGGATGAAGG+AGG | + | chr5_1:68465983-68466002 | None:intergenic | 30.0% | |
| AATAGAGGGGATAAATGTAA+AGG | + | chr5_1:68465993-68466012 | None:intergenic | 30.0% | |
| TGACTTAGTTAGTAGTCAAT+TGG | - | chr5_1:68466172-68466191 | Msa0746340:intron | 30.0% | |
| TGAAAAGGAAAGCAAAATGA+AGG | + | chr5_1:68466205-68466224 | None:intergenic | 30.0% | |
| ! | TTCATTTTGCTTTCCTTTTC+AGG | - | chr5_1:68466204-68466223 | Msa0746340:intron | 30.0% |
| ! | TCATTTTGCTTTCCTTTTCA+GGG | - | chr5_1:68466205-68466224 | Msa0746340:intron | 30.0% |
| CAACACCTTGATTAAACTTA+CGG | + | chr5_1:68466281-68466300 | None:intergenic | 30.0% | |
| AGAAGATAGAGTAATAGATG+GGG | + | chr5_1:68466322-68466341 | None:intergenic | 30.0% | |
| CAGAAGATAGAGTAATAGAT+GGG | + | chr5_1:68466323-68466342 | None:intergenic | 30.0% | |
| ACAGAAGATAGAGTAATAGA+TGG | + | chr5_1:68466324-68466343 | None:intergenic | 30.0% | |
| ATGTTGAAAAGATCATTAGC+AGG | - | chr5_1:68466709-68466728 | Msa0746340:intron | 30.0% | |
| AAATAAGTATGAGTCTTCTC+AGG | + | chr5_1:68466955-68466974 | None:intergenic | 30.0% | |
| ACAAGCTGAAAATATGTATG+GGG | + | chr5_1:68466989-68467008 | None:intergenic | 30.0% | |
| CAACAAGCTGAAAATATGTA+TGG | + | chr5_1:68466991-68467010 | None:intergenic | 30.0% | |
| ! | CATACATATTTTCAGCTTGT+TGG | - | chr5_1:68466989-68467008 | Msa0746340:intron | 30.0% |
| AAAAGAGATGTTGTTCCTTA+TGG | - | chr5_1:68467043-68467062 | Msa0746340:intron | 30.0% | |
| !! | AATCTTGCTCTAAGAAACAA+AGG | + | chr5_1:68467263-68467282 | None:intergenic | 30.0% |
| AGTCAATAATTGAGATGTGA+AGG | - | chr5_1:68467297-68467316 | Msa0746340:intron | 30.0% | |
| AGATCGTAATAATTGCATAC+TGG | - | chr5_1:68467383-68467402 | Msa0746340:intron | 30.0% | |
| ATAATTGCATACTGGATAAG+AGG | - | chr5_1:68467391-68467410 | Msa0746340:intron | 30.0% | |
| ! | TTTCCAACAACTAGTTTCAA+AGG | + | chr5_1:68467599-68467618 | None:intergenic | 30.0% |
| TGAAACTAGTTGTTGGAAAA+TGG | - | chr5_1:68467600-68467619 | Msa0746340:intron | 30.0% | |
| AGTAACTAATAGACTTGTCT+TGG | + | chr5_1:68467635-68467654 | None:intergenic | 30.0% | |
| ! | TATTTCTACACTTTCAACTG+CGG | + | chr5_1:68467669-68467688 | None:intergenic | 30.0% |
| GTTGAAAACTATTCCAATTC+TGG | + | chr5_1:68467707-68467726 | None:intergenic | 30.0% | |
| ACATAGAAAACTTGTGTTAC+AGG | + | chr5_1:68467767-68467786 | None:intergenic | 30.0% | |
| GTAAAGATAAAAGACCTTTG+TGG | - | chr5_1:68468145-68468164 | Msa0746340:intron | 30.0% | |
| GCACTTTACAAAGTAAAGTA+CGG | - | chr5_1:68468184-68468203 | Msa0746340:intron | 30.0% | |
| TTTGAATGGGGCAATTTAAA+AGG | + | chr5_1:68468255-68468274 | None:intergenic | 30.0% | |
| !! | TAAATTTGGTGTGTAGATCA+TGG | - | chr5_1:68468466-68468485 | Msa0746340:intron | 30.0% |
| ! | TTGTTCCTTATTTCCATTCA+AGG | + | chr5_1:68468747-68468766 | None:intergenic | 30.0% |
| !! | TTGTTAAACTAGTCTTCAGA+TGG | + | chr5_1:68468819-68468838 | None:intergenic | 30.0% |
| AATGAAACGCTACTAAAACA+AGG | - | chr5_1:68468852-68468871 | Msa0746340:intron | 30.0% | |
| CTAAAACAAGGAAGAAACAA+AGG | - | chr5_1:68468864-68468883 | Msa0746340:intron | 30.0% | |
| TAAAAAGATAGGTCCTTTCT+TGG | - | chr5_1:68469039-68469058 | Msa0746340:intron | 30.0% | |
| AAAAAGATAGGTCCTTTCTT+GGG | - | chr5_1:68469040-68469059 | Msa0746340:intron | 30.0% | |
| AGTAAAAATATCGATCCACA+AGG | - | chr5_1:68469161-68469180 | Msa0746340:five_prime_UTR | 30.0% | |
| GGATGTGTAAAGTTTGTATT+AGG | - | chr5_1:68469224-68469243 | Msa0746340:five_prime_UTR | 30.0% | |
| ! | TAATTCCTGCAACTGATTCA+TGG | + | chr5_1:68465545-68465564 | None:intergenic | 35.0% |
| ! | CTTTCTAAAAGCAAGGGATT+GGG | - | chr5_1:68465742-68465761 | Msa0746340:three_prime_UTR | 35.0% |
| !! | TCCTTCTAAGGCTTATCAAA+TGG | - | chr5_1:68465766-68465785 | Msa0746340:three_prime_UTR | 35.0% |
| ACCATTTGATAAGCCTTAGA+AGG | + | chr5_1:68465770-68465789 | None:intergenic | 35.0% | |
| GGGATAAATGTAAAGGATGA+AGG | + | chr5_1:68465986-68466005 | None:intergenic | 35.0% | |
| ATACGTGATTCACAACTCAT+TGG | - | chr5_1:68466080-68466099 | Msa0746340:CDS | 35.0% | |
| AGCATCCGTAAGTTTAATCA+AGG | - | chr5_1:68466273-68466292 | Msa0746340:intron | 35.0% | |
| TGTGAGACTGCACATAATAA+TGG | + | chr5_1:68466380-68466399 | None:intergenic | 35.0% | |
| ACCTTTACACAAGTGGTAAT+AGG | + | chr5_1:68466555-68466574 | None:intergenic | 35.0% | |
| ! | GTCTAAAACCTTTACACAAG+TGG | + | chr5_1:68466562-68466581 | None:intergenic | 35.0% |
| !!! | GTAAAGGTTTTAGACATGAC+TGG | - | chr5_1:68466567-68466586 | Msa0746340:intron | 35.0% |
| AGGTACCTTAATGTGATTCA+AGG | + | chr5_1:68466607-68466626 | None:intergenic | 35.0% | |
| AAGTAGCAGTGGAAACTAAA+AGG | + | chr5_1:68466627-68466646 | None:intergenic | 35.0% | |
| ATTCAAGAATCTGGTCCTAT+TGG | + | chr5_1:68466653-68466672 | None:intergenic | 35.0% | |
| TGCACTACTGTTAATTGGTT+CGG | + | chr5_1:68466736-68466755 | None:intergenic | 35.0% | |
| TCAGATGCACTACTGTTAAT+TGG | + | chr5_1:68466741-68466760 | None:intergenic | 35.0% | |
| AGGATAGTTGAGATCATCAA+TGG | + | chr5_1:68466935-68466954 | None:intergenic | 35.0% | |
| !!! | CATATTTTCAGCTTGTTGGA+AGG | - | chr5_1:68466993-68467012 | Msa0746340:intron | 35.0% |
| ! | TAATAGCATTGGAGTCTGTA+TGG | - | chr5_1:68467095-68467114 | Msa0746340:intron | 35.0% |
| ATAGTGTTAACATCTTGCTG+AGG | + | chr5_1:68467124-68467143 | None:intergenic | 35.0% | |
| ! | ACTAAAGCCATTAGTTTAGC+AGG | - | chr5_1:68467421-68467440 | Msa0746340:intron | 35.0% |
| ! | AAATGTTAAGGGCATGTATG+TGG | + | chr5_1:68467526-68467545 | None:intergenic | 35.0% |
| ! | AACTAGTTTCAAAGGCTTTG+TGG | + | chr5_1:68467591-68467610 | None:intergenic | 35.0% |
| !! | AAGCCTTTGAAACTAGTTGT+TGG | - | chr5_1:68467593-68467612 | Msa0746340:intron | 35.0% |
| !! | AACTATTCCAATTCTGGAAC+AGG | + | chr5_1:68467701-68467720 | None:intergenic | 35.0% |
| !!! | TATTCCTTTTAGAACGCACA+CGG | - | chr5_1:68468360-68468379 | Msa0746340:intron | 35.0% |
| ! | CCTTCTTTTCTACAGAAATG+TGG | + | chr5_1:68468506-68468525 | None:intergenic | 35.0% |
| CCACATTTCTGTAGAAAAGA+AGG | - | chr5_1:68468503-68468522 | Msa0746340:intron | 35.0% | |
| TGATGTAGTTGTAAAGCTGT+TGG | + | chr5_1:68468595-68468614 | None:intergenic | 35.0% | |
| ! | TTTGATAGCCTAACCTTGAA+TGG | - | chr5_1:68468731-68468750 | Msa0746340:CDS | 35.0% |
| ! | CCTTATTTCCATTCAAGGTT+AGG | + | chr5_1:68468742-68468761 | None:intergenic | 35.0% |
| CCTAACCTTGAATGGAAATA+AGG | - | chr5_1:68468739-68468758 | Msa0746340:intron | 35.0% | |
| !! | TTAAACTAGTCTTCAGATGG+TGG | + | chr5_1:68468816-68468835 | None:intergenic | 35.0% |
| GCTCTCAATGATTTCATGAT+AGG | - | chr5_1:68468921-68468940 | Msa0746340:CDS | 35.0% | |
| TGGAGAGGGAATAAAAAGAT+AGG | - | chr5_1:68469028-68469047 | Msa0746340:intron | 35.0% | |
| !!! | AGGGTATGCTCTTTTTTGTA+AGG | - | chr5_1:68469064-68469083 | Msa0746340:CDS | 35.0% |
| !!! | GCTCTTTTTTGTAAGGAGTT+TGG | - | chr5_1:68469071-68469090 | Msa0746340:CDS | 35.0% |
| TGAAATTAACACAGTCCTTG+TGG | + | chr5_1:68469179-68469198 | None:intergenic | 35.0% | |
| CCTGAAAAGTTGTCTGCAAT+GGG | + | chr5_1:68465585-68465604 | None:intergenic | 40.0% | |
| ACCTGAAAAGTTGTCTGCAA+TGG | + | chr5_1:68465586-68465605 | None:intergenic | 40.0% | |
| ! | TGACTCGCTTTCTAAAAGCA+AGG | - | chr5_1:68465735-68465754 | Msa0746340:three_prime_UTR | 40.0% |
| ! | GACTCGCTTTCTAAAAGCAA+GGG | - | chr5_1:68465736-68465755 | Msa0746340:three_prime_UTR | 40.0% |
| ! | GCTTTCTAAAAGCAAGGGAT+TGG | - | chr5_1:68465741-68465760 | Msa0746340:three_prime_UTR | 40.0% |
| TCACAACTCATTGGATTGTC+CGG | - | chr5_1:68466089-68466108 | Msa0746340:CDS | 40.0% | |
| !!! | ATCAAGGTGTTGCTTTTCGT+TGG | - | chr5_1:68466289-68466308 | Msa0746340:intron | 40.0% |
| ATATCGCGATCGTGTAATCT+TGG | - | chr5_1:68466413-68466432 | Msa0746340:intron | 40.0% | |
| TTCTTCTGACTCTCGTGATA+TGG | - | chr5_1:68466496-68466515 | Msa0746340:intron | 40.0% | |
| GCCTATTACCACTTGTGTAA+AGG | - | chr5_1:68466551-68466570 | Msa0746340:intron | 40.0% | |
| ! | GCACTACTGTTAATTGGTTC+GGG | + | chr5_1:68466735-68466754 | None:intergenic | 40.0% |
| AGATGTTGTTCCTTATGGCT+TGG | - | chr5_1:68467048-68467067 | Msa0746340:intron | 40.0% | |
| ! | AGAAAAGTGCAGGTCTTATC+AGG | - | chr5_1:68467187-68467206 | Msa0746340:intron | 40.0% |
| !! | AACTAATGGCTTTAGTAGCG+TGG | + | chr5_1:68467417-68467436 | None:intergenic | 40.0% |
| ! | AAGCCATTAGTTTAGCAGGA+TGG | - | chr5_1:68467425-68467444 | Msa0746340:intron | 40.0% |
| GTTCCATCCTGCTAAACTAA+TGG | + | chr5_1:68467431-68467450 | None:intergenic | 40.0% | |
| AGTTTAGCAGGATGGAACAT+AGG | - | chr5_1:68467433-68467452 | Msa0746340:CDS | 40.0% | |
| TGGAGACATTCTCTAATCTG+AGG | + | chr5_1:68467480-68467499 | None:intergenic | 40.0% | |
| AGTATTGCCTGTTCCAGAAT+TGG | - | chr5_1:68467691-68467710 | Msa0746340:CDS | 40.0% | |
| !! | GAAAGTGCTCAATTAGTCTG+TGG | - | chr5_1:68467740-68467759 | Msa0746340:intron | 40.0% |
| TAAAGTGCACCGAACGTTTA+CGG | + | chr5_1:68468172-68468191 | None:intergenic | 40.0% | |
| ! | ATTACCGTGTGCGTTCTAAA+AGG | + | chr5_1:68468367-68468386 | None:intergenic | 40.0% |
| TTCTGTAGAAAAGAAGGCTC+TGG | - | chr5_1:68468509-68468528 | Msa0746340:intron | 40.0% | |
| ! | TTGTAAAGCTGTTGGTGAAG+GGG | + | chr5_1:68468587-68468606 | None:intergenic | 40.0% |
| ! | GTTGTAAAGCTGTTGGTGAA+GGG | + | chr5_1:68468588-68468607 | None:intergenic | 40.0% |
| ! | AGTTGTAAAGCTGTTGGTGA+AGG | + | chr5_1:68468589-68468608 | None:intergenic | 40.0% |
| TGAAATGATCCCTGCTTGAT+GGG | + | chr5_1:68468650-68468669 | None:intergenic | 40.0% | |
| ATGAAATGATCCCTGCTTGA+TGG | + | chr5_1:68468651-68468670 | None:intergenic | 40.0% | |
| ACCCCAAACTTGTAGAAAAC+TGG | - | chr5_1:68468894-68468913 | Msa0746340:CDS | 40.0% | |
| ! | CCCAGTTTTCTACAAGTTTG+GGG | + | chr5_1:68468898-68468917 | None:intergenic | 40.0% |
| CCCCAAACTTGTAGAAAACT+GGG | - | chr5_1:68468895-68468914 | Msa0746340:CDS | 40.0% | |
| ! | CCCCAGTTTTCTACAAGTTT+GGG | + | chr5_1:68468899-68468918 | None:intergenic | 40.0% |
| CCCAAACTTGTAGAAAACTG+GGG | - | chr5_1:68468896-68468915 | Msa0746340:CDS | 40.0% | |
| ! | ACCCCAGTTTTCTACAAGTT+TGG | + | chr5_1:68468900-68468919 | None:intergenic | 40.0% |
| AAACTTGTAGAAAACTGGGG+TGG | - | chr5_1:68468899-68468918 | Msa0746340:CDS | 40.0% | |
| GAGTTAGGCCTTTAGTAGTA+TGG | - | chr5_1:68469008-68469027 | Msa0746340:intron | 40.0% | |
| TTCCCTCTCCATACTACTAA+AGG | + | chr5_1:68469019-68469038 | None:intergenic | 40.0% | |
| ! | AGTTTGTATTAGGTTGCCCT+AGG | - | chr5_1:68469234-68469253 | Msa0746340:five_prime_UTR | 40.0% |
| AAACCAAACCTTACTGCCTA+GGG | + | chr5_1:68469253-68469272 | None:intergenic | 40.0% | |
| AAAACCAAACCTTACTGCCT+AGG | + | chr5_1:68469254-68469273 | None:intergenic | 40.0% | |
| GGATTCCATGAATCAGTTGC+AGG | - | chr5_1:68465537-68465556 | Msa0746340:three_prime_UTR | 45.0% | |
| GAAAAGTTGTCTGCAATGGG+TGG | + | chr5_1:68465582-68465601 | None:intergenic | 45.0% | |
| ! | CCCATTGCAGACAACTTTTC+AGG | - | chr5_1:68465582-68465601 | Msa0746340:three_prime_UTR | 45.0% |
| AAGGGATTGGGATCCTTCTA+AGG | - | chr5_1:68465754-68465773 | Msa0746340:three_prime_UTR | 45.0% | |
| CACAACTCATTGGATTGTCC+GGG | - | chr5_1:68466090-68466109 | Msa0746340:CDS | 45.0% | |
| ATTGTCCGGGTATACAAGAG+AGG | - | chr5_1:68466103-68466122 | Msa0746340:CDS | 45.0% | |
| AAGACAGGAAGACCCTGAAA+AGG | + | chr5_1:68466220-68466239 | None:intergenic | 45.0% | |
| GGTCTTCCTGTCTTTGCAAT+TGG | - | chr5_1:68466226-68466245 | Msa0746340:intron | 45.0% | |
| CCAACACCAATTGCAAAGAC+AGG | + | chr5_1:68466235-68466254 | None:intergenic | 45.0% | |
| CCTGTCTTTGCAATTGGTGT+TGG | - | chr5_1:68466232-68466251 | Msa0746340:intron | 45.0% | |
| CTCGGCCTTGAATCACATTA+AGG | - | chr5_1:68466599-68466618 | Msa0746340:intron | 45.0% | |
| CCTATTGGATCAAGTAGCAG+TGG | + | chr5_1:68466638-68466657 | None:intergenic | 45.0% | |
| ! | CCACTGCTACTTGATCCAAT+AGG | - | chr5_1:68466635-68466654 | Msa0746340:intron | 45.0% |
| CATGCAGAAACCAAGCCATA+AGG | + | chr5_1:68467061-68467080 | None:intergenic | 45.0% | |
| !!! | TGAAGCCACTTTTACACGAG+AGG | - | chr5_1:68467158-68467177 | Msa0746340:intron | 45.0% |
| CTTGTCCTCTCGTGTAAAAG+TGG | + | chr5_1:68467166-68467185 | None:intergenic | 45.0% | |
| ! | GAGGACAAGAAGAAAAGTGC+AGG | - | chr5_1:68467177-68467196 | Msa0746340:intron | 45.0% |
| ! | CAAAGGCTTTGTGGAGTGTA+AGG | + | chr5_1:68467582-68467601 | None:intergenic | 45.0% |
| TCTACACTTTCAACTGCGGT+TGG | + | chr5_1:68467665-68467684 | None:intergenic | 45.0% | |
| CTTTGTGGTCCGTAAACGTT+CGG | - | chr5_1:68468160-68468179 | Msa0746340:intron | 45.0% | |
| GGATCATCCAGACATTCAGA+AGG | - | chr5_1:68468530-68468549 | Msa0746340:intron | 45.0% | |
| TCATCCAGACATTCAGAAGG+TGG | - | chr5_1:68468533-68468552 | Msa0746340:intron | 45.0% | |
| AAGCGAGAACTGCTATTCCT+TGG | - | chr5_1:68468556-68468575 | Msa0746340:CDS | 45.0% | |
| CAAGCAGGGATCATTTCATG+TGG | - | chr5_1:68468652-68468671 | Msa0746340:intron | 45.0% | |
| TGTGGAATTTCCAGAACCTC+CGG | - | chr5_1:68468670-68468689 | Msa0746340:intron | 45.0% | |
| ! | GAACAATTGGACTAGAGCAC+AGG | - | chr5_1:68468769-68468788 | Msa0746340:intron | 45.0% |
| AGGCCTTTAGTAGTATGGAG+AGG | - | chr5_1:68469013-68469032 | Msa0746340:intron | 45.0% | |
| GGCCTTTAGTAGTATGGAGA+GGG | - | chr5_1:68469014-68469033 | Msa0746340:intron | 45.0% | |
| AGATAGGTCCTTTCTTGGGA+AGG | - | chr5_1:68469044-68469063 | Msa0746340:intron | 45.0% | |
| GATAGGTCCTTTCTTGGGAA+GGG | - | chr5_1:68469045-68469064 | Msa0746340:intron | 45.0% | |
| TAGCAAGCGCGTTATACGTT+AGG | - | chr5_1:68469203-68469222 | Msa0746340:five_prime_UTR | 45.0% | |
| !! | TCAAATATAAATAAATATAT+TGG | - | chr5_1:68465630-68465649 | Msa0746340:three_prime_UTR | 5.0% |
| GAGCACCTCTCTTGTATACC+CGG | + | chr5_1:68466111-68466130 | None:intergenic | 50.0% | |
| !!! | GGTGTTGCTTTTCGTTGGAG+CGG | - | chr5_1:68466294-68466313 | Msa0746340:intron | 50.0% |
| CCATGCTTCTTCGATGCAGA+AGG | + | chr5_1:68466528-68466547 | None:intergenic | 50.0% | |
| CCTTCTGCATCGAAGAAGCA+TGG | - | chr5_1:68466525-68466544 | Msa0746340:intron | 50.0% | |
| ! | CTGCATCGAAGAAGCATGGA+CGG | - | chr5_1:68466529-68466548 | Msa0746340:intron | 50.0% |
| ! | GTGCAGGTCTTATCAGGATG+CGG | - | chr5_1:68467193-68467212 | Msa0746340:intron | 50.0% |
| ATGGAACATAGGTGCCTGCT+TGG | - | chr5_1:68467444-68467463 | Msa0746340:CDS | 50.0% | |
| GAGGCAAACAAATGCCAAGC+AGG | + | chr5_1:68467461-68467480 | None:intergenic | 50.0% | |
| ! | GGCTTTGTGGAGTGTAAGGA+GGG | + | chr5_1:68467578-68467597 | None:intergenic | 50.0% |
| ! | AGGCTTTGTGGAGTGTAAGG+AGG | + | chr5_1:68467579-68467598 | None:intergenic | 50.0% |
| CGAACGTTTACGGACCACAA+AGG | + | chr5_1:68468162-68468181 | None:intergenic | 50.0% | |
| GCTTCCACCTTCTGAATGTC+TGG | + | chr5_1:68468540-68468559 | None:intergenic | 50.0% | |
| TTGGTGAAGGGGATGATCCA+AGG | + | chr5_1:68468576-68468595 | None:intergenic | 50.0% | |
| ! | TGATGGGTGCAACAGCTTCA+CGG | + | chr5_1:68468634-68468653 | None:intergenic | 50.0% |
| ATTTCCAGAACCTCCGGATG+TGG | - | chr5_1:68468676-68468695 | Msa0746340:intron | 50.0% | |
| AACCTCCGGATGTGGATACA+AGG | - | chr5_1:68468684-68468703 | Msa0746340:intron | 50.0% | |
| ACCTCCGGATGTGGATACAA+GGG | - | chr5_1:68468685-68468704 | Msa0746340:intron | 50.0% | |
| GCAACCCTTGTATCCACATC+CGG | + | chr5_1:68468692-68468711 | None:intergenic | 50.0% | |
| AGCACAGGCCTAATCCAAGA+CGG | - | chr5_1:68468784-68468803 | Msa0746340:intron | 50.0% | |
| GAGCATACCCTTCCCAAGAA+AGG | + | chr5_1:68469055-68469074 | None:intergenic | 50.0% | |
| ! | TTAGGTTGCCCTAGGCAGTA+AGG | - | chr5_1:68469242-68469261 | Msa0746340:five_prime_UTR | 50.0% |
| TTGCCCTAGGCAGTAAGGTT+TGG | - | chr5_1:68469247-68469266 | Msa0746340:five_prime_UTR | 50.0% | |
| !! | CATGACTGGCCTGAAGCTCT+CGG | - | chr5_1:68466581-68466600 | Msa0746340:intron | 55.0% |
| GATTCAAGGCCGAGAGCTTC+AGG | + | chr5_1:68466593-68466612 | None:intergenic | 55.0% | |
| CTTATCAGGATGCGGACGAG+AGG | - | chr5_1:68467201-68467220 | Msa0746340:intron | 55.0% | |
| TGCAACAGCTTCACGGAGTC+TGG | + | chr5_1:68468627-68468646 | None:intergenic | 55.0% | |
| AGCTGTTGCACCCATCAAGC+AGG | - | chr5_1:68468637-68468656 | Msa0746340:intron | 55.0% | |
| GCTGTTGCACCCATCAAGCA+GGG | - | chr5_1:68468638-68468657 | Msa0746340:intron | 55.0% | |
| GTATCCACATCCGGAGGTTC+TGG | + | chr5_1:68468683-68468702 | None:intergenic | 55.0% | |
| ACCCTTGTATCCACATCCGG+AGG | + | chr5_1:68468689-68468708 | None:intergenic | 55.0% | |
| GGCTTGAGCCGTCTTGGATT+AGG | + | chr5_1:68468795-68468814 | None:intergenic | 55.0% | |
| ! | GATGGTGGCTTGAGCCGTCT+TGG | + | chr5_1:68468801-68468820 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 68465322 | 68469339 | 68465322 | ID=Msa0746340;Name=Msa0746340 |
| chr5_1 | mRNA | 68465322 | 68469339 | 68465322 | ID=Msa0746340-mRNA-1;Parent=Msa0746340;Name=Msa0746340-mRNA-1;_AED=0.08;_eAED=0.08;_QI=193|1|1|1|0.9|0.81|11|543|330 |
| chr5_1 | exon | 68465322 | 68466179 | 68465322 | ID=Msa0746340-mRNA-1:exon:20409;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68467427 | 68467507 | 68467427 | ID=Msa0746340-mRNA-1:exon:20408;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68467647 | 68467748 | 68467647 | ID=Msa0746340-mRNA-1:exon:20407;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68468041 | 68468136 | 68468041 | ID=Msa0746340-mRNA-1:exon:20406;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68468227 | 68468286 | 68468227 | ID=Msa0746340-mRNA-1:exon:20405;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68468382 | 68468435 | 68468382 | ID=Msa0746340-mRNA-1:exon:20404;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68468537 | 68468614 | 68468537 | ID=Msa0746340-mRNA-1:exon:20403;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68468701 | 68468754 | 68468701 | ID=Msa0746340-mRNA-1:exon:20402;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68468874 | 68468957 | 68468874 | ID=Msa0746340-mRNA-1:exon:20401;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68469058 | 68469302 | 68469058 | ID=Msa0746340-mRNA-1:exon:20400;Parent=Msa0746340-mRNA-1 |
| chr5_1 | exon | 68469323 | 68469339 | 68469323 | ID=Msa0746340-mRNA-1:exon:20399;Parent=Msa0746340-mRNA-1 |
| chr5_1 | five_prime_UTR | 68469323 | 68469339 | 68469323 | ID=Msa0746340-mRNA-1:five_prime_utr;Parent=Msa0746340-mRNA-1 |
| chr5_1 | five_prime_UTR | 68469127 | 68469302 | 68469127 | ID=Msa0746340-mRNA-1:five_prime_utr;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68469058 | 68469126 | 68469058 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68468874 | 68468957 | 68468874 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68468701 | 68468754 | 68468701 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68468537 | 68468614 | 68468537 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68468382 | 68468435 | 68468382 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68468227 | 68468286 | 68468227 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68468041 | 68468136 | 68468041 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68467647 | 68467748 | 68467647 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68467427 | 68467507 | 68467427 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | CDS | 68465865 | 68466179 | 68465865 | ID=Msa0746340-mRNA-1:cds;Parent=Msa0746340-mRNA-1 |
| chr5_1 | three_prime_UTR | 68465322 | 68465864 | 68465322 | ID=Msa0746340-mRNA-1:three_prime_utr;Parent=Msa0746340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
