Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380350 | XP_003604073.1 | 96.693 | 635 | 14 | 4 | 1 | 631 | 1 | 632 | 0.0 | 1245 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380350 | sp|Q9SDX3|UGPA_MUSAC | 48.673 | 452 | 212 | 5 | 195 | 629 | 19 | 467 | 8.43e-135 | 405 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380350 | G7J8L5 | 96.693 | 635 | 14 | 4 | 1 | 631 | 1 | 632 | 0.0 | 1245 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001500 | Msa0380350 | 0.979487 | 4.465049e-148 | -8.615850e-47 |
Msa0380350 | Msa0997450 | 0.801594 | 8.364973e-49 | -8.615850e-47 |
Msa0380350 | Msa1365700 | 0.894327 | 2.738378e-75 | -8.615850e-47 |
Msa0380350 | Msa1376600 | 0.889286 | 2.774527e-73 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380350 | MtrunA17_Chr3g0145841 | 96.693 | 635 | 14 | 4 | 1 | 631 | 1 | 632 | 0.0 | 1245 |
Msa0380350 | MtrunA17_Chr5g0433871 | 50.000 | 430 | 197 | 4 | 217 | 629 | 42 | 470 | 1.41e-121 | 369 |
Msa0380350 | MtrunA17_Chr3g0109761 | 48.338 | 331 | 157 | 3 | 312 | 629 | 2 | 331 | 7.66e-101 | 310 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380350 | AT3G03250.1 | 49.767 | 430 | 198 | 4 | 217 | 629 | 41 | 469 | 7.55e-125 | 377 |
Msa0380350 | AT3G03250.2 | 49.764 | 424 | 195 | 4 | 217 | 623 | 41 | 463 | 1.04e-123 | 375 |
Msa0380350 | AT3G03250.3 | 50.000 | 422 | 193 | 4 | 217 | 621 | 41 | 461 | 1.80e-123 | 374 |
Msa0380350 | AT5G17310.2 | 46.903 | 452 | 220 | 5 | 195 | 629 | 22 | 470 | 3.09e-120 | 365 |
Msa0380350 | AT5G17310.5 | 49.596 | 371 | 170 | 3 | 276 | 629 | 20 | 390 | 3.71e-115 | 350 |
Msa0380350 | AT5G17310.1 | 49.596 | 371 | 170 | 3 | 276 | 629 | 20 | 390 | 3.71e-115 | 350 |
Msa0380350 | AT5G17310.3 | 49.730 | 370 | 169 | 3 | 277 | 629 | 16 | 385 | 9.97e-115 | 348 |
Msa0380350 | AT5G17310.6 | 49.254 | 335 | 153 | 3 | 312 | 629 | 2 | 336 | 2.45e-100 | 309 |
Msa0380350 | AT5G17310.4 | 49.254 | 335 | 153 | 3 | 312 | 629 | 2 | 336 | 2.45e-100 | 309 |
Msa0380350 | AT3G03600.1 | 62.000 | 200 | 73 | 1 | 1 | 197 | 1 | 200 | 2.16e-84 | 264 |
Find 182 sgRNAs with CRISPR-Local
Find 634 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTCAACCGTTGGATATTA+TGG | 0.198596 | 3_1:-82019614 | None:intergenic |
TCATGCCTCCGGAACAAATA+TGG | 0.222520 | 3_1:+82020904 | Msa0380350:CDS |
TGCAAAACCGGGCTTGAAAT+TGG | 0.242884 | 3_1:+82026389 | Msa0380350:CDS |
CCAGTATAGTAAGTATTCTT+TGG | 0.255537 | 3_1:-82019884 | None:intergenic |
TGAACAAACTAAGAATCTTT+TGG | 0.267833 | 3_1:+82020856 | Msa0380350:CDS |
CACTCATGATAGTACTTTAA+AGG | 0.273991 | 3_1:+82021358 | Msa0380350:CDS |
CTTTGAGCTTATGTCCAAAA+AGG | 0.277828 | 3_1:+82020267 | Msa0380350:CDS |
TATAATACCTCCAATTAAAT+AGG | 0.279423 | 3_1:-82029036 | None:intergenic |
TGGAGTTGTGATTGAGAATA+AGG | 0.300476 | 3_1:+82026422 | Msa0380350:CDS |
CGTGACTATTGTTGCAAAAC+CGG | 0.304515 | 3_1:+82026377 | Msa0380350:CDS |
TGAGAGGCGACGTGTGGTTT+GGG | 0.308284 | 3_1:+82025043 | Msa0380350:CDS |
TTAATTGGAGGTATTATATT+CGG | 0.319117 | 3_1:+82029041 | Msa0380350:three_prime_UTR |
AAGAAACAAATAACAAGTTT+TGG | 0.320342 | 3_1:+82028817 | Msa0380350:three_prime_UTR |
GTTGCGAGATCGAAACTTCT+TGG | 0.325917 | 3_1:-82020359 | None:intergenic |
TAGACGCTAAATGAACTAAA+TGG | 0.326381 | 3_1:-82019573 | None:intergenic |
ATTGGTGAACCATTCATTCT+TGG | 0.328350 | 3_1:-82028676 | None:intergenic |
CAATTATTTCATCACTGTTA+TGG | 0.332739 | 3_1:-82028845 | None:intergenic |
GGAGAAGGAGAAGAGTAATT+TGG | 0.337508 | 3_1:+82020684 | Msa0380350:CDS |
TACGATCTGTTATGCTTTGA+AGG | 0.338892 | 3_1:+82019853 | Msa0380350:five_prime_UTR |
AAGCAATGCGGCTGAAAGTA+TGG | 0.339549 | 3_1:-82020519 | None:intergenic |
AATTGAACAGAGGGGTTAAC+AGG | 0.340725 | 3_1:-82020550 | None:intergenic |
CTATCCAACCCCACGATACT+TGG | 0.342114 | 3_1:-82025012 | None:intergenic |
TATTTGTTTCTTCAACCTTT+CGG | 0.343324 | 3_1:-82028806 | None:intergenic |
ATGTTCCATTCTCAGATTGC+TGG | 0.348622 | 3_1:+82024964 | Msa0380350:intron |
CATACAAATCAAAGTCTTAT+CGG | 0.349904 | 3_1:-82020158 | None:intergenic |
AGGAATTGTACCTTTGAGAT+TGG | 0.363802 | 3_1:-82024069 | None:intergenic |
GGAATTGTACCTTTGAGATT+GGG | 0.368076 | 3_1:-82024068 | None:intergenic |
TTGAAAACCCATATTTGTTC+CGG | 0.368093 | 3_1:-82020912 | None:intergenic |
TGGAACCCGGCTTCCGTACT+TGG | 0.371009 | 3_1:-82021312 | None:intergenic |
CAAGGGAACAAAACGAGATT+CGG | 0.372900 | 3_1:-82024650 | None:intergenic |
GGTATTTGTTTCTAATGAAT+AGG | 0.379270 | 3_1:+82028706 | Msa0380350:three_prime_UTR |
AAAGACTTACATCTTTATCT+TGG | 0.380478 | 3_1:-82023716 | None:intergenic |
TTCTCAATCACAACTCCATC+TGG | 0.381348 | 3_1:-82026417 | None:intergenic |
AAATGCACCTTAAAATTCAT+TGG | 0.382777 | 3_1:-82023038 | None:intergenic |
TTGCGAGATCGAAACTTCTT+GGG | 0.402017 | 3_1:-82020358 | None:intergenic |
CTTCTCGAGAAGCAGTGTTT+TGG | 0.409136 | 3_1:-82020599 | None:intergenic |
GTGAGAGGCGACGTGTGGTT+TGG | 0.410735 | 3_1:+82025042 | Msa0380350:CDS |
CCAAAGAATACTTACTATAC+TGG | 0.411067 | 3_1:+82019884 | Msa0380350:five_prime_UTR |
TCCAATTCTCTCTGGCGTAC+TGG | 0.414072 | 3_1:+82020310 | Msa0380350:CDS |
CATTTCAAAGATTACACTTA+CGG | 0.415466 | 3_1:+82020106 | Msa0380350:CDS |
ACCAGTACGCCAGAGAGAAT+TGG | 0.424267 | 3_1:-82020311 | None:intergenic |
TCTTCCCTTGCTCGTCATAA+TGG | 0.433968 | 3_1:+82020202 | Msa0380350:CDS |
ATATTCCGTTCACTAATGAT+AGG | 0.443745 | 3_1:+82022430 | Msa0380350:CDS |
TGGGGCAAATATTACTTTGA+AGG | 0.448244 | 3_1:+82025062 | Msa0380350:CDS |
ATCGACAATGACGATGCAAT+CGG | 0.448666 | 3_1:-82020413 | None:intergenic |
GCTTCCGTACTTGGAGTTGA+GGG | 0.453661 | 3_1:-82021303 | None:intergenic |
TTTAAAGCGTCGGTTCTAGC+TGG | 0.455824 | 3_1:-82024839 | None:intergenic |
CATGCCTCCGGAACAAATAT+GGG | 0.463448 | 3_1:+82020905 | Msa0380350:CDS |
GTGGTGTACTACTACCTTGA+GGG | 0.464198 | 3_1:-82020759 | None:intergenic |
TGAGTTTAAGAACCATTAAG+AGG | 0.464580 | 3_1:+82024010 | Msa0380350:CDS |
GAATCGACAAGAGCGACAAT+TGG | 0.465763 | 3_1:-82020484 | None:intergenic |
AGTAATTTGGCAGCTAAGCT+TGG | 0.466826 | 3_1:+82020697 | Msa0380350:CDS |
GCACGGCAAATCAAAGCATC+TGG | 0.470494 | 3_1:-82028734 | None:intergenic |
CGCAACAAGAAACTCTGCTT+CGG | 0.474889 | 3_1:+82020376 | Msa0380350:CDS |
ATCAGATTTACTGCTTCTGC+AGG | 0.475211 | 3_1:+82024681 | Msa0380350:CDS |
ATAAATGTCTGACCTCAATC+TGG | 0.475272 | 3_1:-82021086 | None:intergenic |
ACGACGCAAGCTGAAATAAG+AGG | 0.476193 | 3_1:-82019767 | None:intergenic |
CCTGGATTTATTATTGTCAC+AGG | 0.477736 | 3_1:+82022459 | Msa0380350:CDS |
CTTCTTGGGACTGTTGCTGT+TGG | 0.480287 | 3_1:-82020344 | None:intergenic |
AACAGAGGGGTTAACAGGAA+TGG | 0.486093 | 3_1:-82020545 | None:intergenic |
ATTACTCTTCTCCTTCTCCT+TGG | 0.487507 | 3_1:-82020680 | None:intergenic |
CCATCTGATAATGTTAGCTC+TGG | 0.488544 | 3_1:-82021622 | None:intergenic |
TTGAAGCTCAATCATGCCTC+CGG | 0.491024 | 3_1:+82020893 | Msa0380350:CDS |
GCCCCTCTTCCAATTCTCTC+TGG | 0.493204 | 3_1:+82020302 | Msa0380350:CDS |
CCTGTGACAATAATAAATCC+AGG | 0.494692 | 3_1:-82022459 | None:intergenic |
ACAGAGGGGTTAACAGGAAT+GGG | 0.495983 | 3_1:-82020544 | None:intergenic |
TAATGTAAAATCTCAACCGT+TGG | 0.497640 | 3_1:-82019623 | None:intergenic |
AGATGCTGGACCGGCAGTAC+AGG | 0.497972 | 3_1:+82024192 | Msa0380350:CDS |
CAGTTCTTTGATAATGCGAT+TGG | 0.498035 | 3_1:+82024616 | Msa0380350:intron |
GTGACTATTGTTGCAAAACC+GGG | 0.498486 | 3_1:+82026378 | Msa0380350:CDS |
AAAAGTGCGCACATCAATGC+TGG | 0.499284 | 3_1:-82021498 | None:intergenic |
TCAACTCCAAGTACGGAAGC+CGG | 0.499412 | 3_1:+82021306 | Msa0380350:CDS |
TCGACAATGACGATGCAATC+GGG | 0.500294 | 3_1:-82020412 | None:intergenic |
TGCAGATATCCAAGAATGAA+TGG | 0.501034 | 3_1:+82028667 | Msa0380350:exon |
GGCTTCCGTACTTGGAGTTG+AGG | 0.502670 | 3_1:-82021304 | None:intergenic |
AATGAAAATACCTGTACTGC+CGG | 0.504944 | 3_1:-82024202 | None:intergenic |
GAAGAGACTATGTAGTATCA+AGG | 0.506119 | 3_1:-82028964 | None:intergenic |
CGCCAGAGAGAATTGGAAGA+GGG | 0.506319 | 3_1:-82020304 | None:intergenic |
AGATTGCTGGCTTTCGAAGT+CGG | 0.507646 | 3_1:+82024977 | Msa0380350:intron |
CTTGATCATTAACCAGATTG+AGG | 0.508702 | 3_1:+82021074 | Msa0380350:CDS |
AGATAGACAAATTGAACAGA+GGG | 0.508931 | 3_1:-82020559 | None:intergenic |
TAAATCTGATGTTGCATCCA+AGG | 0.511158 | 3_1:-82024668 | None:intergenic |
CTTCTACAAGGAACAGATGC+TGG | 0.513459 | 3_1:+82024178 | Msa0380350:CDS |
CAAGGGTGATATAGCATCGT+AGG | 0.516295 | 3_1:-82020734 | None:intergenic |
GAATGGTTCACCAATGTTGA+GGG | 0.517544 | 3_1:+82028684 | Msa0380350:exon |
GCAACAGTTGTCACGCATAG+AGG | 0.518529 | 3_1:-82019674 | None:intergenic |
CATTCCAAGTATCGTGGGGT+TGG | 0.522731 | 3_1:+82025008 | Msa0380350:CDS |
CAACTCCAAGTACGGAAGCC+GGG | 0.523495 | 3_1:+82021307 | Msa0380350:CDS |
AATGATGAGTGGCGACTTGA+CGG | 0.524133 | 3_1:-82020087 | None:intergenic |
GGAATTTCCAATTTCAAGCC+CGG | 0.527588 | 3_1:-82026396 | None:intergenic |
TCATAATCTAAGTAGGGTAA+AGG | 0.529652 | 3_1:+82021598 | Msa0380350:intron |
TTGTTTACTGTACAACGAGT+TGG | 0.529919 | 3_1:+82028989 | Msa0380350:three_prime_UTR |
AAGGGAACAAAACGAGATTC+GGG | 0.535779 | 3_1:-82024649 | None:intergenic |
GACTTATTGTTATATACCGA+CGG | 0.537556 | 3_1:+82029068 | Msa0380350:three_prime_UTR |
ACAAGGAACAGATGCTGGAC+CGG | 0.539255 | 3_1:+82024183 | Msa0380350:CDS |
GCGGTGTGGACGGAGGTTGA+CGG | 0.541750 | 3_1:-82019717 | None:intergenic |
AATTCTCTCTGGCGTACTGG+TGG | 0.544639 | 3_1:+82020313 | Msa0380350:CDS |
TTGGATAGTTTGATTGTGAG+AGG | 0.544817 | 3_1:+82025027 | Msa0380350:CDS |
ATGCAATCGGGAGGCTGAGT+AGG | 0.546108 | 3_1:-82020400 | None:intergenic |
CTTGGGACCCGAATATGAAA+AGG | 0.546232 | 3_1:+82024874 | Msa0380350:CDS |
TTAAATCCTGTGATAGACTT+GGG | 0.546969 | 3_1:+82024857 | Msa0380350:CDS |
ATTGACAAAGGCGGTGTGGA+CGG | 0.548471 | 3_1:-82019727 | None:intergenic |
TTTAAATCCTGTGATAGACT+TGG | 0.550417 | 3_1:+82024856 | Msa0380350:CDS |
AACTTCTTGACGATCATCTG+AGG | 0.551175 | 3_1:+82020644 | Msa0380350:CDS |
AAATCCATTCCAAGTATCGT+GGG | 0.551935 | 3_1:+82025003 | Msa0380350:CDS |
GATTTCATCAAAGAGAGGAT+TGG | 0.553663 | 3_1:-82020245 | None:intergenic |
TAGACCCTCAACTCCAAGTA+CGG | 0.557315 | 3_1:+82021299 | Msa0380350:intron |
GCTTTCATGTAGATCTGCAA+TGG | 0.567678 | 3_1:+82021023 | Msa0380350:intron |
CAAGCTGAAATAAGAGGGAG+AGG | 0.571066 | 3_1:-82019761 | None:intergenic |
AAATCTGATGTTGCATCCAA+GGG | 0.571120 | 3_1:-82024667 | None:intergenic |
ACAACAAGCTGCCAAGGAGA+AGG | 0.571501 | 3_1:+82020669 | Msa0380350:CDS |
TTAAGATCACATTAGACGAA+TGG | 0.572268 | 3_1:-82023013 | None:intergenic |
GGCGGCGTGATCAGAGAAAG+AGG | 0.573818 | 3_1:-82019696 | None:intergenic |
AAGGGTGATATAGCATCGTA+GGG | 0.575204 | 3_1:-82020733 | None:intergenic |
CAACCCCACGATACTTGGAA+TGG | 0.575731 | 3_1:-82025007 | None:intergenic |
GAGAGGCGACGTGTGGTTTG+GGG | 0.576021 | 3_1:+82025044 | Msa0380350:CDS |
GAATTGTACCTTTGAGATTG+GGG | 0.576929 | 3_1:-82024067 | None:intergenic |
GAGGGAACAACAAGCTGCCA+AGG | 0.577303 | 3_1:+82020663 | Msa0380350:CDS |
TGGTGTACTACTACCTTGAG+GGG | 0.580656 | 3_1:-82020758 | None:intergenic |
TCGGGTCCCAAGTCTATCAC+AGG | 0.582833 | 3_1:-82024863 | None:intergenic |
ATCAGATGGACATAGCAGTA+AGG | 0.585945 | 3_1:+82021636 | Msa0380350:CDS |
ATAGTAAGTATTCTTTGGAA+CGG | 0.586309 | 3_1:-82019879 | None:intergenic |
TCAAAGATTTCATCAAAGAG+AGG | 0.587278 | 3_1:-82020250 | None:intergenic |
AACAAAACGAGATTCGGGTA+TGG | 0.588682 | 3_1:-82024644 | None:intergenic |
TGATTGCCATTCTGTTGCGA+AGG | 0.589249 | 3_1:-82020129 | None:intergenic |
CAAATCCATTCCAAGTATCG+TGG | 0.589695 | 3_1:+82025002 | Msa0380350:CDS |
ACGCCAGAGAGAATTGGAAG+AGG | 0.589838 | 3_1:-82020305 | None:intergenic |
GATCTATACACTTCTAGAGA+AGG | 0.590819 | 3_1:+82024800 | Msa0380350:CDS |
TCTCTTTACTGGGAACCGAA+AGG | 0.591193 | 3_1:+82028791 | Msa0380350:three_prime_UTR |
TAAAGAGAAAAGCTAACTGA+TGG | 0.593367 | 3_1:-82028776 | None:intergenic |
CTGTACAACGAGTTGGAGCA+CGG | 0.594044 | 3_1:+82028996 | Msa0380350:three_prime_UTR |
AGCGACCATTATGACGAGCA+AGG | 0.595760 | 3_1:-82020207 | None:intergenic |
ACTAATGATAGGTGGAACCC+TGG | 0.596499 | 3_1:+82022441 | Msa0380350:CDS |
TGAATGGTTCACCAATGTTG+AGG | 0.596690 | 3_1:+82028683 | Msa0380350:exon |
AAAACCCATATTTGTTCCGG+AGG | 0.599710 | 3_1:-82020909 | None:intergenic |
AGCTGAAATAAGAGGGAGAG+GGG | 0.600257 | 3_1:-82019759 | None:intergenic |
ATCACATTAGACGAATGGCT+TGG | 0.601415 | 3_1:-82023008 | None:intergenic |
TTACGGCCTTCGCAACAGAA+TGG | 0.602114 | 3_1:+82020123 | Msa0380350:CDS |
AGCTTTGTAACTGTATTGCA+CGG | 0.602625 | 3_1:-82028751 | None:intergenic |
AAGCTGAAATAAGAGGGAGA+GGG | 0.602826 | 3_1:-82019760 | None:intergenic |
GGGGACGCTGCGATTGACAA+AGG | 0.602848 | 3_1:-82019739 | None:intergenic |
TTGAAATTGGAAATTCCAGA+TGG | 0.603296 | 3_1:+82026402 | Msa0380350:CDS |
AAACAAATACCCCTCAACAT+TGG | 0.607929 | 3_1:-82028694 | None:intergenic |
AAATGCTATTGATTATTGCA+TGG | 0.611246 | 3_1:+82022874 | Msa0380350:CDS |
TTCCGTTCACTAATGATAGG+TGG | 0.611432 | 3_1:+82022433 | Msa0380350:CDS |
GCGACCATTATGACGAGCAA+GGG | 0.613460 | 3_1:-82020206 | None:intergenic |
CGACGCAAGCTGAAATAAGA+GGG | 0.618140 | 3_1:-82019766 | None:intergenic |
CTGTGACAATAATAAATCCA+GGG | 0.621297 | 3_1:-82022458 | None:intergenic |
CTTAGCACAAATGCACACAT+TGG | 0.623840 | 3_1:+82020064 | Msa0380350:CDS |
AATTGTACCTTTGAGATTGG+GGG | 0.632312 | 3_1:-82024066 | None:intergenic |
CAAGTCTTCTGTTATCGATG+AGG | 0.634448 | 3_1:+82020444 | Msa0380350:CDS |
GACAAAGGCGGTGTGGACGG+AGG | 0.637372 | 3_1:-82019724 | None:intergenic |
ACTTCTTGACGATCATCTGA+GGG | 0.639356 | 3_1:+82020645 | Msa0380350:CDS |
TATGATCAAACTCTTCTACA+AGG | 0.640197 | 3_1:+82024166 | Msa0380350:CDS |
TATCACAGGATTTAAAGCGT+CGG | 0.642268 | 3_1:-82024849 | None:intergenic |
GTAAGTATTCTTTGGAACGG+CGG | 0.642517 | 3_1:-82019876 | None:intergenic |
TTCCACCTATCATTAGTGAA+CGG | 0.643911 | 3_1:-82022435 | None:intergenic |
CCAGAGCTAACATTATCAGA+TGG | 0.645741 | 3_1:+82021622 | Msa0380350:CDS |
AGATGGACATAGCAGTAAGG+AGG | 0.647768 | 3_1:+82021639 | Msa0380350:CDS |
TCTGCAATGGATATTTGTGA+CGG | 0.651282 | 3_1:+82021036 | Msa0380350:CDS |
CATGACACCATAATATCCAA+CGG | 0.656755 | 3_1:+82019607 | Msa0380350:five_prime_UTR |
AAGATAGACAAATTGAACAG+AGG | 0.659788 | 3_1:-82020560 | None:intergenic |
TGATTGTGAGAGGCGACGTG+TGG | 0.661366 | 3_1:+82025037 | Msa0380350:CDS |
GATCGTACTAACAACGACGA+TGG | 0.663141 | 3_1:-82019837 | None:intergenic |
GTGTGGACGGAGGTTGACGG+CGG | 0.665065 | 3_1:-82019714 | None:intergenic |
TGCTATTGATTATTGCATGG+AGG | 0.668962 | 3_1:+82022877 | Msa0380350:CDS |
GCCAGAGAGAATTGGAAGAG+GGG | 0.678738 | 3_1:-82020303 | None:intergenic |
AATCCATTCCAAGTATCGTG+GGG | 0.679086 | 3_1:+82025004 | Msa0380350:CDS |
TGCGATTGACAAAGGCGGTG+TGG | 0.679672 | 3_1:-82019731 | None:intergenic |
AATGGTTCACCAATGTTGAG+GGG | 0.680466 | 3_1:+82028685 | Msa0380350:exon |
TGTGATGAAGTGCGACAATG+TGG | 0.682299 | 3_1:+82022697 | Msa0380350:CDS |
GCTGAAATAAGAGGGAGAGG+GGG | 0.689005 | 3_1:-82019758 | None:intergenic |
GTAATCTTTGAAATGATGAG+TGG | 0.693605 | 3_1:-82020098 | None:intergenic |
ATGCGGCTGAAAGTATGGAG+AGG | 0.695845 | 3_1:-82020514 | None:intergenic |
ACAATGACGATGCAATCGGG+AGG | 0.701583 | 3_1:-82020409 | None:intergenic |
GATAGACAAATTGAACAGAG+GGG | 0.719867 | 3_1:-82020558 | None:intergenic |
GACGCTGCGATTGACAAAGG+CGG | 0.726332 | 3_1:-82019736 | None:intergenic |
GTGATGAAGTGCGACAATGT+GGG | 0.730135 | 3_1:+82022698 | Msa0380350:CDS |
TGCAGGCATACATTTGACGA+TGG | 0.733353 | 3_1:+82022403 | Msa0380350:intron |
GGTGTACTACTACCTTGAGG+GGG | 0.743686 | 3_1:-82020757 | None:intergenic |
CAGGAATGGGATAAGCAATG+CGG | 0.754863 | 3_1:-82020531 | None:intergenic |
AGGGTGATATAGCATCGTAG+GGG | 0.760959 | 3_1:-82020732 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATTATTGTAAATAGAAA+TGG | + | chr3_1:82023391-82023410 | Msa0380350:intron | 10.0% |
!! | AAAAATGTAATACAAATATA+TGG | - | chr3_1:82023758-82023777 | None:intergenic | 10.0% |
!! | TATATATAATTCATTTGAAA+GGG | - | chr3_1:82024945-82024964 | None:intergenic | 10.0% |
!! | ATATATATAATTCATTTGAA+AGG | - | chr3_1:82024946-82024965 | None:intergenic | 10.0% |
!! | TTATTTATTAATAAAACTCT+GGG | + | chr3_1:82028141-82028160 | Msa0380350:intron | 10.0% |
!! | TAATACAATCAAATCAAATA+TGG | - | chr3_1:82021409-82021428 | None:intergenic | 15.0% |
!!! | TAATATTTTGCTTTAAGTTA+TGG | - | chr3_1:82022159-82022178 | None:intergenic | 15.0% |
!! | CTAAAATATTGTTTATTCAA+TGG | + | chr3_1:82022765-82022784 | Msa0380350:intron | 15.0% |
!! | CTATTTACAATAATTTACAT+AGG | - | chr3_1:82023388-82023407 | None:intergenic | 15.0% |
!!! | CTTAAATTTGTAATTTTCAT+TGG | + | chr3_1:82023431-82023450 | Msa0380350:intron | 15.0% |
!!! | CTTAAATTTGTAATTTTCAT+TGG | + | chr3_1:82023431-82023450 | Msa0380350:intron | 15.0% |
!! | TTATTGAAAATGAATTGAAA+GGG | + | chr3_1:82024121-82024140 | Msa0380350:intron | 15.0% |
!!! | ATTAACTAGTCTTATATTTA+TGG | - | chr3_1:82024342-82024361 | None:intergenic | 15.0% |
!!! | AACTATATTTTCGTATAAAT+GGG | + | chr3_1:82025922-82025941 | Msa0380350:intron | 15.0% |
!!! | TTATATTCTTGTTTGTTTAT+TGG | + | chr3_1:82026509-82026528 | Msa0380350:intron | 15.0% |
!!! | TATATTCTTGTTTGTTTATT+GGG | + | chr3_1:82026510-82026529 | Msa0380350:intron | 15.0% |
!! | ATATATATATATCAAATGAG+AGG | + | chr3_1:82027820-82027839 | Msa0380350:intron | 15.0% |
!! | CTTATTTATTAATAAAACTC+TGG | + | chr3_1:82028140-82028159 | Msa0380350:intron | 15.0% |
!! | TTAAAACATACAACTAAATT+AGG | + | chr3_1:82028345-82028364 | Msa0380350:intron | 15.0% |
!!! | TTTTAGCTTTTAGATAAAAA+AGG | + | chr3_1:82028897-82028916 | Msa0380350:three_prime_UTR | 15.0% |
!!! | ATTTTTTCATCCTATTTAAT+TGG | + | chr3_1:82029026-82029045 | Msa0380350:three_prime_UTR | 15.0% |
!! | TTATACTTACATATCAGTTA+TGG | + | chr3_1:82021105-82021124 | Msa0380350:intron | 20.0% |
!!! | TTGTAAAAATATTTTGCAAC+AGG | - | chr3_1:82021158-82021177 | None:intergenic | 20.0% |
!! | AAAACTAAAAAATCAGTCAA+TGG | - | chr3_1:82021252-82021271 | None:intergenic | 20.0% |
!!! | TTTGCATTTGTTCTATATTT+TGG | + | chr3_1:82021528-82021547 | Msa0380350:intron | 20.0% |
!!! | TTGTTCTATATTTTGGATTT+TGG | + | chr3_1:82021535-82021554 | Msa0380350:intron | 20.0% |
!! | AATACATCATAATCTAAGTA+GGG | + | chr3_1:82021592-82021611 | Msa0380350:intron | 20.0% |
!! | CTAAATGTTTACTATTACTA+GGG | + | chr3_1:82021757-82021776 | Msa0380350:intron | 20.0% |
!!! | AGTTTCTCATTTTATTTTCT+AGG | + | chr3_1:82022658-82022677 | Msa0380350:intron | 20.0% |
!!! | GTTTCTCATTTTATTTTCTA+GGG | + | chr3_1:82022659-82022678 | Msa0380350:intron | 20.0% |
!! | ATTATGATAAGACTATAAGA+AGG | - | chr3_1:82022745-82022764 | None:intergenic | 20.0% |
!! | CTATACAAAACTTATGAAAT+AGG | - | chr3_1:82023327-82023346 | None:intergenic | 20.0% |
!!! | CTATTTCATAAGTTTTGTAT+AGG | + | chr3_1:82023325-82023344 | Msa0380350:intron | 20.0% |
!! | AATAATTTACATAGGAAACA+GGG | - | chr3_1:82023380-82023399 | None:intergenic | 20.0% |
!! | CTTATTGAAAATGAATTGAA+AGG | + | chr3_1:82024120-82024139 | Msa0380350:intron | 20.0% |
!!! | ATTTTTCACCTTTTCATATT+CGG | - | chr3_1:82024885-82024904 | None:intergenic | 20.0% |
!! | ATATTCAAAAAAGAACATAC+AGG | - | chr3_1:82025231-82025250 | None:intergenic | 20.0% |
!!! | ATGTTCTTTTTTGAATATCA+TGG | + | chr3_1:82025233-82025252 | Msa0380350:intron | 20.0% |
!!! | TTTTCATTTCACAAATACAA+AGG | - | chr3_1:82025289-82025308 | None:intergenic | 20.0% |
!! | ATTTGTGAAATGAAAAGATA+TGG | + | chr3_1:82025293-82025312 | Msa0380350:intron | 20.0% |
!! | GATAAAAAAAAACATCAAAG+TGG | + | chr3_1:82025488-82025507 | Msa0380350:intron | 20.0% |
!!! | ACGAAAATATAGTTGAATTT+TGG | - | chr3_1:82025916-82025935 | None:intergenic | 20.0% |
!!! | CAACTATATTTTCGTATAAA+TGG | + | chr3_1:82025921-82025940 | Msa0380350:intron | 20.0% |
!!! | ACTATATTTTCGTATAAATG+GGG | + | chr3_1:82025923-82025942 | Msa0380350:intron | 20.0% |
!! | ATAGTCATAAATACTGTTTA+GGG | - | chr3_1:82026066-82026085 | None:intergenic | 20.0% |
!! | GAATGCAGTAAATTATAATT+AGG | - | chr3_1:82026201-82026220 | None:intergenic | 20.0% |
!! | CAAAAATAAATACAATCCAT+AGG | - | chr3_1:82026324-82026343 | None:intergenic | 20.0% |
!!! | ACTTATATTGATTTTATCAG+AGG | + | chr3_1:82026627-82026646 | Msa0380350:intron | 20.0% |
!!! | CTTATATTGATTTTATCAGA+GGG | + | chr3_1:82026628-82026647 | Msa0380350:intron | 20.0% |
!! | TCAAATGTTTAATATGTTCT+TGG | - | chr3_1:82027050-82027069 | None:intergenic | 20.0% |
!!! | GTATGTTTTAAATAGAGTAA+GGG | - | chr3_1:82028336-82028355 | None:intergenic | 20.0% |
!!! | TGTATGTTTTAAATAGAGTA+AGG | - | chr3_1:82028337-82028356 | None:intergenic | 20.0% |
!! | ATAAATGCTGGAAAATTAAA+AGG | - | chr3_1:82028528-82028547 | None:intergenic | 20.0% |
!!! | TTTTCTCAGTTTTTTTCTTT+TGG | + | chr3_1:82028595-82028614 | Msa0380350:intron | 20.0% |
!!! | AAGAAACAAATAACAAGTTT+TGG | + | chr3_1:82028817-82028836 | Msa0380350:three_prime_UTR | 20.0% |
!! | TATAATACCTCCAATTAAAT+AGG | - | chr3_1:82029039-82029058 | None:intergenic | 20.0% |
!!! | TTAATTGGAGGTATTATATT+CGG | + | chr3_1:82029041-82029060 | Msa0380350:three_prime_UTR | 20.0% |
!! | ATAGTAAGTATTCTTTGGAA+CGG | - | chr3_1:82019882-82019901 | None:intergenic | 25.0% |
!!! | GTTTTTTCAAAGACAAACAT+AGG | - | chr3_1:82019943-82019962 | None:intergenic | 25.0% |
! | CAACTGTAAAACAAACAAAA+TGG | - | chr3_1:82019982-82020001 | None:intergenic | 25.0% |
! | CATTTCAAAGATTACACTTA+CGG | + | chr3_1:82020106-82020125 | Msa0380350:CDS | 25.0% |
!! | CATACAAATCAAAGTCTTAT+CGG | - | chr3_1:82020161-82020180 | None:intergenic | 25.0% |
!!! | TTCTTAGTTTGTTCAATATC+TGG | - | chr3_1:82020851-82020870 | None:intergenic | 25.0% |
!! | TGAACAAACTAAGAATCTTT+TGG | + | chr3_1:82020856-82020875 | Msa0380350:CDS | 25.0% |
! | AGACATAAAATAAGATATCG+AGG | - | chr3_1:82020955-82020974 | None:intergenic | 25.0% |
! | TCTTTGTTAAAAATCAGCAA+TGG | - | chr3_1:82021335-82021354 | None:intergenic | 25.0% |
! | ATCAAATATGGAAATCGAAA+TGG | - | chr3_1:82021397-82021416 | None:intergenic | 25.0% |
! | AAACACTTCAATAATAGACA+AGG | - | chr3_1:82021436-82021455 | None:intergenic | 25.0% |
!! | AAATACTTTTCCAAAACCTA+TGG | - | chr3_1:82021473-82021492 | None:intergenic | 25.0% |
!!! | ATAGGTTTTGGAAAAGTATT+TGG | + | chr3_1:82021472-82021491 | Msa0380350:intron | 25.0% |
!! | TAGATTATGATGTATTGATC+AGG | - | chr3_1:82021588-82021607 | None:intergenic | 25.0% |
! | CAATACATCATAATCTAAGT+AGG | + | chr3_1:82021591-82021610 | Msa0380350:intron | 25.0% |
! | GCTAAATGTTTACTATTACT+AGG | + | chr3_1:82021756-82021775 | Msa0380350:intron | 25.0% |
! | ATATTACTACTACCTTCATA+TGG | + | chr3_1:82021801-82021820 | Msa0380350:intron | 25.0% |
! | AGAAGATAACTATTGTTTAC+TGG | + | chr3_1:82022055-82022074 | Msa0380350:intron | 25.0% |
! | AGTTATGGTAAAAAAAACTC+TGG | - | chr3_1:82022144-82022163 | None:intergenic | 25.0% |
! | ATGTCAAAGGAATAAGTATT+TGG | + | chr3_1:82022210-82022229 | Msa0380350:intron | 25.0% |
! | TGTAAGAAATTTGCAAATCA+TGG | - | chr3_1:82022338-82022357 | None:intergenic | 25.0% |
! | TGCACATGTATATAATTTGA+AGG | - | chr3_1:82022387-82022406 | None:intergenic | 25.0% |
! | TTCAAATTATATACATGTGC+AGG | + | chr3_1:82022386-82022405 | Msa0380350:intron | 25.0% |
! | AGAAAAATGAGAGATATGAA+GGG | - | chr3_1:82022509-82022528 | None:intergenic | 25.0% |
!!! | TCATTTTATTTTCTAGGGAA+AGG | + | chr3_1:82022664-82022683 | Msa0380350:intron | 25.0% |
! | AATATTTAAGTCTCAATCCA+TGG | - | chr3_1:82022799-82022818 | None:intergenic | 25.0% |
! | ATATCTACATAATGTAGTCA+AGG | - | chr3_1:82022836-82022855 | None:intergenic | 25.0% |
!! | AAATGCTATTGATTATTGCA+TGG | + | chr3_1:82022874-82022893 | Msa0380350:CDS | 25.0% |
! | AAGAAGAAAGAAAATGAATC+AGG | - | chr3_1:82022971-82022990 | None:intergenic | 25.0% |
!!! | TCTTTCTTCTTTCTTTTTTC+AGG | + | chr3_1:82022980-82022999 | Msa0380350:intron | 25.0% |
!! | CTTAACTCCAATGAATTTTA+AGG | + | chr3_1:82023031-82023050 | Msa0380350:CDS | 25.0% |
! | AAATGCACCTTAAAATTCAT+TGG | - | chr3_1:82023041-82023060 | None:intergenic | 25.0% |
!!! | TGCTAAATTAATTAGTCTTG+AGG | + | chr3_1:82023119-82023138 | Msa0380350:intron | 25.0% |
! | AGAAATTCAAACATATGAAC+TGG | + | chr3_1:82023198-82023217 | Msa0380350:intron | 25.0% |
! | AACAGACATCTTTAAACTTA+CGG | + | chr3_1:82023239-82023258 | Msa0380350:intron | 25.0% |
! | ATAATTTACATAGGAAACAG+GGG | - | chr3_1:82023379-82023398 | None:intergenic | 25.0% |
! | CAATAATTTACATAGGAAAC+AGG | - | chr3_1:82023381-82023400 | None:intergenic | 25.0% |
! | ATTCTTGTCAAATGCTTATT+AGG | + | chr3_1:82023600-82023619 | Msa0380350:intron | 25.0% |
! | TCAAATGCTTATTAGGTAAT+GGG | + | chr3_1:82023607-82023626 | Msa0380350:intron | 25.0% |
! | AAAGACTTACATCTTTATCT+TGG | - | chr3_1:82023719-82023738 | None:intergenic | 25.0% |
!! | AATCTAGTAATTTTCTCGTT+TGG | + | chr3_1:82023970-82023989 | Msa0380350:intron | 25.0% |
!! | GTTTTTCTTTTGCATAAAAC+AGG | + | chr3_1:82024275-82024294 | Msa0380350:intron | 25.0% |
!! | TTTTTCACCTTTTCATATTC+GGG | - | chr3_1:82024884-82024903 | None:intergenic | 25.0% |
! | TTTGAAAGGGAATAAAAACA+AGG | - | chr3_1:82024932-82024951 | None:intergenic | 25.0% |
! | TTTGTAGAGAAATTTAAGCA+CGG | + | chr3_1:82025447-82025466 | Msa0380350:intron | 25.0% |
! | ACGGTTAAAAATTGAGAAAT+AGG | + | chr3_1:82025466-82025485 | Msa0380350:intron | 25.0% |
!! | TATCAGAACTGATTCAAATA+TGG | + | chr3_1:82025554-82025573 | Msa0380350:intron | 25.0% |
!! | ATCAGAACTGATTCAAATAT+GGG | + | chr3_1:82025555-82025574 | Msa0380350:intron | 25.0% |
! | GATAGTCATAAATACTGTTT+AGG | - | chr3_1:82026067-82026086 | None:intergenic | 25.0% |
! | AAGAAAAGTTGAAGGAAATT+TGG | - | chr3_1:82026101-82026120 | None:intergenic | 25.0% |
!!! | TGTTTTGTCTTTTGAAAACA+TGG | + | chr3_1:82026602-82026621 | Msa0380350:intron | 25.0% |
!!! | GTTTTGTCTTTTGAAAACAT+GGG | + | chr3_1:82026603-82026622 | Msa0380350:intron | 25.0% |
! | ATCGTAATGAATTCAGAATT+CGG | - | chr3_1:82026792-82026811 | None:intergenic | 25.0% |
!! | ATTCACAAATCAACAGTTTT+AGG | - | chr3_1:82026855-82026874 | None:intergenic | 25.0% |
! | CAGTTTCAAAATAGTTCAAA+AGG | - | chr3_1:82026910-82026929 | None:intergenic | 25.0% |
!!! | CTTTTGAACTATTTTGAAAC+TGG | + | chr3_1:82026908-82026927 | Msa0380350:intron | 25.0% |
! | TGACTTGAATTTAATAAGAC+AGG | - | chr3_1:82027140-82027159 | None:intergenic | 25.0% |
!! | TCCTTTAAAGAAAAAAGCTT+TGG | + | chr3_1:82027297-82027316 | Msa0380350:intron | 25.0% |
!!! | TCCAAAGCTTTTTTCTTTAA+AGG | - | chr3_1:82027301-82027320 | None:intergenic | 25.0% |
!!! | TAAAGAAAAAAGCTTTGGAA+TGG | + | chr3_1:82027302-82027321 | Msa0380350:intron | 25.0% |
! | AAACATATTCCATCCAAATT+AGG | + | chr3_1:82027411-82027430 | Msa0380350:intron | 25.0% |
! | GAAAAAATTCCTAATTTGGA+TGG | - | chr3_1:82027423-82027442 | None:intergenic | 25.0% |
! | GTGAGAAAAAATTCCTAATT+TGG | - | chr3_1:82027427-82027446 | None:intergenic | 25.0% |
! | GAAAATACAGATGAAATTGA+AGG | + | chr3_1:82028203-82028222 | Msa0380350:intron | 25.0% |
! | ACATACAACTAAATTAGGAT+TGG | + | chr3_1:82028350-82028369 | Msa0380350:intron | 25.0% |
! | TTCATTTAATGAATGTTCGT+AGG | - | chr3_1:82028423-82028442 | None:intergenic | 25.0% |
!! | AAAAAACTGAGAAAAAGTGT+TGG | - | chr3_1:82028590-82028609 | None:intergenic | 25.0% |
!!! | GGTATTTGTTTCTAATGAAT+AGG | + | chr3_1:82028706-82028725 | Msa0380350:three_prime_UTR | 25.0% |
!! | TATTTGTTTCTTCAACCTTT+CGG | - | chr3_1:82028809-82028828 | None:intergenic | 25.0% |
! | CAATTATTTCATCACTGTTA+TGG | - | chr3_1:82028848-82028867 | None:intergenic | 25.0% |
!! | TTTTCATCCTATTTAATTGG+AGG | + | chr3_1:82029029-82029048 | Msa0380350:three_prime_UTR | 25.0% |
TAATGTAAAATCTCAACCGT+TGG | - | chr3_1:82019626-82019645 | None:intergenic | 30.0% | |
CCAGTATAGTAAGTATTCTT+TGG | - | chr3_1:82019887-82019906 | None:intergenic | 30.0% | |
CCAAAGAATACTTACTATAC+TGG | + | chr3_1:82019884-82019903 | Msa0380350:five_prime_UTR | 30.0% | |
!! | AAATGGATTGTTTGAGCTTA+GGG | - | chr3_1:82019965-82019984 | None:intergenic | 30.0% |
!! | AAAATGGATTGTTTGAGCTT+AGG | - | chr3_1:82019966-82019985 | None:intergenic | 30.0% |
!! | GTAATCTTTGAAATGATGAG+TGG | - | chr3_1:82020101-82020120 | None:intergenic | 30.0% |
TCAAAGATTTCATCAAAGAG+AGG | - | chr3_1:82020253-82020272 | None:intergenic | 30.0% | |
AGATAGACAAATTGAACAGA+GGG | - | chr3_1:82020562-82020581 | None:intergenic | 30.0% | |
AAGATAGACAAATTGAACAG+AGG | - | chr3_1:82020563-82020582 | None:intergenic | 30.0% | |
TTGAAAACCCATATTTGTTC+CGG | - | chr3_1:82020915-82020934 | None:intergenic | 30.0% | |
TCGCATTATCATTTATTCCT+TGG | + | chr3_1:82021131-82021150 | Msa0380350:intron | 30.0% | |
CGCATTATCATTTATTCCTT+GGG | + | chr3_1:82021132-82021151 | Msa0380350:intron | 30.0% | |
TATGAGGTATATACACAAAC+TGG | - | chr3_1:82021186-82021205 | None:intergenic | 30.0% | |
GGCAACTAAGTATATATTGA+TGG | - | chr3_1:82021231-82021250 | None:intergenic | 30.0% | |
CACTCATGATAGTACTTTAA+AGG | + | chr3_1:82021358-82021377 | Msa0380350:CDS | 30.0% | |
ACTTCAATAATAGACAAGGT+GGG | - | chr3_1:82021432-82021451 | None:intergenic | 30.0% | |
TTAACTTCATCATCTTCCAT+AGG | + | chr3_1:82021454-82021473 | Msa0380350:intron | 30.0% | |
TCATAATCTAAGTAGGGTAA+AGG | + | chr3_1:82021598-82021617 | Msa0380350:intron | 30.0% | |
CATGGTTTCGAACTAATTAA+AGG | - | chr3_1:82021959-82021978 | None:intergenic | 30.0% | |
!! | AGCGATTAACAATTTTGAAG+CGG | - | chr3_1:82021997-82022016 | None:intergenic | 30.0% |
AATTGTTAATCGCTCTAACA+TGG | + | chr3_1:82022003-82022022 | Msa0380350:intron | 30.0% | |
CTTTGACATCTCAAATTTAC+GGG | - | chr3_1:82022199-82022218 | None:intergenic | 30.0% | |
CCTTTGACATCTCAAATTTA+CGG | - | chr3_1:82022200-82022219 | None:intergenic | 30.0% | |
ACAAAATTTACCATGCCTAA+CGG | + | chr3_1:82022243-82022262 | Msa0380350:intron | 30.0% | |
ATAATGATAGTTTGACCGTT+AGG | - | chr3_1:82022261-82022280 | None:intergenic | 30.0% | |
ATATTCCGTTCACTAATGAT+AGG | + | chr3_1:82022430-82022449 | Msa0380350:CDS | 30.0% | |
CTGTGACAATAATAAATCCA+GGG | - | chr3_1:82022461-82022480 | None:intergenic | 30.0% | |
GAGAAAAATGAGAGATATGA+AGG | - | chr3_1:82022510-82022529 | None:intergenic | 30.0% | |
AAGACTATAAGAAGGATACT+TGG | - | chr3_1:82022737-82022756 | None:intergenic | 30.0% | |
!!! | CTGCTACTTCACTTTTTTTA+AGG | + | chr3_1:82022934-82022953 | Msa0380350:intron | 30.0% |
AGAAAATGAATCAGGAAACA+CGG | - | chr3_1:82022963-82022982 | None:intergenic | 30.0% | |
TTAAGATCACATTAGACGAA+TGG | - | chr3_1:82023016-82023035 | None:intergenic | 30.0% | |
ACAGACATCTTTAAACTTAC+GGG | + | chr3_1:82023240-82023259 | Msa0380350:intron | 30.0% | |
TAGGAAACAAATTGAGAACA+AGG | - | chr3_1:82023308-82023327 | None:intergenic | 30.0% | |
TAATTTACATAGGAAACAGG+GGG | - | chr3_1:82023378-82023397 | None:intergenic | 30.0% | |
TTTGATCTGTGCTTAACATT+AGG | - | chr3_1:82023461-82023480 | None:intergenic | 30.0% | |
! | AATTTTCATTGGAGATCCTA+AGG | + | chr3_1:82023442-82023461 | Msa0380350:intron | 30.0% |
AGCATTTGACAAGAATTAGT+AGG | - | chr3_1:82023596-82023615 | None:intergenic | 30.0% | |
GTCAAATGCTTATTAGGTAA+TGG | + | chr3_1:82023606-82023625 | Msa0380350:intron | 30.0% | |
CAAATGCTTATTAGGTAATG+GGG | + | chr3_1:82023608-82023627 | Msa0380350:intron | 30.0% | |
TTTGTAATCTATGCAGCTTA+AGG | + | chr3_1:82023680-82023699 | Msa0380350:intron | 30.0% | |
TCAACTACAATAAGTCAATC+AGG | - | chr3_1:82023869-82023888 | None:intergenic | 30.0% | |
! | GATTGACTTATTGTAGTTGA+AGG | + | chr3_1:82023869-82023888 | Msa0380350:intron | 30.0% |
! | TGGTTTTCGTTCATTTTCTT+GGG | + | chr3_1:82023936-82023955 | Msa0380350:intron | 30.0% |
TGAGTTTAAGAACCATTAAG+AGG | + | chr3_1:82024010-82024029 | Msa0380350:CDS | 30.0% | |
AGAATGCTGGACTAATAATA+AGG | - | chr3_1:82024092-82024111 | None:intergenic | 30.0% | |
TATGATCAAACTCTTCTACA+AGG | + | chr3_1:82024166-82024185 | Msa0380350:CDS | 30.0% | |
! | TAAGACTAGTTAATCTGCAA+TGG | + | chr3_1:82024348-82024367 | Msa0380350:intron | 30.0% |
! | CTGTAAATTTTTATCACCAC+CGG | + | chr3_1:82024408-82024427 | Msa0380350:intron | 30.0% |
AGTAATGTCACAAATCACAA+TGG | + | chr3_1:82024467-82024486 | Msa0380350:intron | 30.0% | |
TTTAAATCCTGTGATAGACT+TGG | + | chr3_1:82024856-82024875 | Msa0380350:CDS | 30.0% | |
TTAAATCCTGTGATAGACTT+GGG | + | chr3_1:82024857-82024876 | Msa0380350:CDS | 30.0% | |
TATTACCTTCAATTGTCTAG+AGG | + | chr3_1:82025147-82025166 | Msa0380350:intron | 30.0% | |
ATTACCTTCAATTGTCTAGA+GGG | + | chr3_1:82025148-82025167 | Msa0380350:intron | 30.0% | |
TTGAAACACTAAGTGAAGTA+TGG | - | chr3_1:82025182-82025201 | None:intergenic | 30.0% | |
TCAAATTTCTTAGAACCACT+TGG | + | chr3_1:82025198-82025217 | Msa0380350:intron | 30.0% | |
CAAATTTCTTAGAACCACTT+GGG | + | chr3_1:82025199-82025218 | Msa0380350:intron | 30.0% | |
AAATTTCTTAGAACCACTTG+GGG | + | chr3_1:82025200-82025219 | Msa0380350:intron | 30.0% | |
! | TCAGAACTGATTCAAATATG+GGG | + | chr3_1:82025556-82025575 | Msa0380350:intron | 30.0% |
AAATTCCAGTTTATCCTACA+AGG | - | chr3_1:82025700-82025719 | None:intergenic | 30.0% | |
! | ATTGTTCTATAGCAGTTTTG+AGG | + | chr3_1:82025783-82025802 | Msa0380350:intron | 30.0% |
!! | TATAGTTGAATTTTGGTGCA+AGG | - | chr3_1:82025909-82025928 | None:intergenic | 30.0% |
! | ATAAATACTGTTTAGGGTCT+TGG | - | chr3_1:82026060-82026079 | None:intergenic | 30.0% |
TGAACAAGAAGAAAAGTTGA+AGG | - | chr3_1:82026109-82026128 | None:intergenic | 30.0% | |
TGCTACTAAATTTACACAGT+TGG | + | chr3_1:82026259-82026278 | Msa0380350:intron | 30.0% | |
ATTTACACAGTTGGTTATGT+AGG | + | chr3_1:82026268-82026287 | Msa0380350:intron | 30.0% | |
TTTACACAGTTGGTTATGTA+GGG | + | chr3_1:82026269-82026288 | Msa0380350:intron | 30.0% | |
TTGAAATTGGAAATTCCAGA+TGG | + | chr3_1:82026402-82026421 | Msa0380350:CDS | 30.0% | |
TACAAGTCTTCTTCTTTCAA+TGG | + | chr3_1:82026485-82026504 | Msa0380350:intron | 30.0% | |
! | ATTCTTGTTTGTTTATTGGG+CGG | + | chr3_1:82026513-82026532 | Msa0380350:intron | 30.0% |
!!! | AACGTTTGTTTTGTTTGAAC+TGG | + | chr3_1:82026556-82026575 | Msa0380350:intron | 30.0% |
GTCTGGATACATAACTAAAA+GGG | - | chr3_1:82026656-82026675 | None:intergenic | 30.0% | |
AGTCTGGATACATAACTAAA+AGG | - | chr3_1:82026657-82026676 | None:intergenic | 30.0% | |
AATATCAAGATTATGACTCC+CGG | - | chr3_1:82026716-82026735 | None:intergenic | 30.0% | |
TTAGGAATAACTGTAGCTTT+GGG | - | chr3_1:82026837-82026856 | None:intergenic | 30.0% | |
TTTAGGAATAACTGTAGCTT+TGG | - | chr3_1:82026838-82026857 | None:intergenic | 30.0% | |
TTGAATGATGTGGATCAAAT+GGG | - | chr3_1:82026969-82026988 | None:intergenic | 30.0% | |
TTTGAATGATGTGGATCAAA+TGG | - | chr3_1:82026970-82026989 | None:intergenic | 30.0% | |
!! | TCCAATTAAAGGAAGTATCA+GGG | - | chr3_1:82027027-82027046 | None:intergenic | 30.0% |
TATGTTCTTGGTCCAATTAA+AGG | - | chr3_1:82027038-82027057 | None:intergenic | 30.0% | |
! | TTGAACCGACTTTATTTAAC+CGG | + | chr3_1:82027181-82027200 | Msa0380350:intron | 30.0% |
!! | ATCAAGTATTGAATACCACA+AGG | + | chr3_1:82027360-82027379 | Msa0380350:intron | 30.0% |
!! | TCAAGTATTGAATACCACAA+GGG | + | chr3_1:82027361-82027380 | Msa0380350:intron | 30.0% |
! | TTTTTCTCACTGATCACTTT+CGG | + | chr3_1:82027437-82027456 | Msa0380350:intron | 30.0% |
TGTTACTGAAACTAAACAGA+GGG | + | chr3_1:82027500-82027519 | Msa0380350:intron | 30.0% | |
ATTAAGGAATGACAATTGAG+CGG | + | chr3_1:82027560-82027579 | Msa0380350:intron | 30.0% | |
! | ATGGCTTGGAATAAACAAAT+GGG | - | chr3_1:82027661-82027680 | None:intergenic | 30.0% |
TACCCTCAGATTAAAATGAA+CGG | + | chr3_1:82027876-82027895 | Msa0380350:intron | 30.0% | |
!! | AACCGTTCATTTTAATCTGA+GGG | - | chr3_1:82027881-82027900 | None:intergenic | 30.0% |
GATGAACATGAACGATTAAT+CGG | - | chr3_1:82028000-82028019 | None:intergenic | 30.0% | |
!! | AATAATCCTTCCTTTTGAGT+TGG | + | chr3_1:82028164-82028183 | Msa0380350:intron | 30.0% |
AATACAGATGAAATTGAAGG+AGG | + | chr3_1:82028206-82028225 | Msa0380350:intron | 30.0% | |
! | ATTTTGTACTAGTAACTGGT+TGG | - | chr3_1:82028293-82028312 | None:intergenic | 30.0% |
!! | GGTTATTTTGTACTAGTAAC+TGG | - | chr3_1:82028297-82028316 | None:intergenic | 30.0% |
CTATTAGGAATGTGTATGTT+AGG | - | chr3_1:82028396-82028415 | None:intergenic | 30.0% | |
!! | CTATTAGTTAAAGCTTGTTG+GGG | - | chr3_1:82028493-82028512 | None:intergenic | 30.0% |
! | GCTATTAGTTAAAGCTTGTT+GGG | - | chr3_1:82028494-82028513 | None:intergenic | 30.0% |
TGCTATTAGTTAAAGCTTGT+TGG | - | chr3_1:82028495-82028514 | None:intergenic | 30.0% | |
!! | AAAAGTGTTGGTTAATCAAG+AGG | - | chr3_1:82028578-82028597 | None:intergenic | 30.0% |
ATTACTTTGTGCCAATTTAC+AGG | + | chr3_1:82028631-82028650 | Msa0380350:intron | 30.0% | |
TAAAGAGAAAAGCTAACTGA+TGG | - | chr3_1:82028779-82028798 | None:intergenic | 30.0% | |
!!! | AGTTAGCTTTTCTCTTTACT+GGG | + | chr3_1:82028781-82028800 | Msa0380350:three_prime_UTR | 30.0% |
CTAAAAGCTAAAAAGCTACA+AGG | - | chr3_1:82028890-82028909 | None:intergenic | 30.0% | |
GACTTATTGTTATATACCGA+CGG | + | chr3_1:82029068-82029087 | Msa0380350:three_prime_UTR | 30.0% | |
CATGACACCATAATATCCAA+CGG | + | chr3_1:82019607-82019626 | Msa0380350:five_prime_UTR | 35.0% | |
ATCTCAACCGTTGGATATTA+TGG | - | chr3_1:82019617-82019636 | None:intergenic | 35.0% | |
!!! | CGATGGATAAGTTTTGATTG+CGG | - | chr3_1:82019823-82019842 | None:intergenic | 35.0% |
TACGATCTGTTATGCTTTGA+AGG | + | chr3_1:82019853-82019872 | Msa0380350:five_prime_UTR | 35.0% | |
GATTTCATCAAAGAGAGGAT+TGG | - | chr3_1:82020248-82020267 | None:intergenic | 35.0% | |
CTTTGAGCTTATGTCCAAAA+AGG | + | chr3_1:82020267-82020286 | Msa0380350:CDS | 35.0% | |
GATAGACAAATTGAACAGAG+GGG | - | chr3_1:82020561-82020580 | None:intergenic | 35.0% | |
GAGAGAAAGTAGAAAAGTTG+TGG | - | chr3_1:82020781-82020800 | None:intergenic | 35.0% | |
TCTGCAATGGATATTTGTGA+CGG | + | chr3_1:82021036-82021055 | Msa0380350:CDS | 35.0% | |
CTTGATCATTAACCAGATTG+AGG | + | chr3_1:82021074-82021093 | Msa0380350:CDS | 35.0% | |
ATAAATGTCTGACCTCAATC+TGG | - | chr3_1:82021089-82021108 | None:intergenic | 35.0% | |
TGAGTTGCATATGTTGTATG+AGG | - | chr3_1:82021202-82021221 | None:intergenic | 35.0% | |
TAAAAATCAGCAATGGAACC+CGG | - | chr3_1:82021328-82021347 | None:intergenic | 35.0% | |
CACTTCAATAATAGACAAGG+TGG | - | chr3_1:82021433-82021452 | None:intergenic | 35.0% | |
! | TCATCATCTTCCATAGGTTT+TGG | + | chr3_1:82021460-82021479 | Msa0380350:intron | 35.0% |
CGGTGAATGTGAATATATCA+TGG | - | chr3_1:82021977-82021996 | None:intergenic | 35.0% | |
! | CCGTAAATTTGAGATGTCAA+AGG | + | chr3_1:82022197-82022216 | Msa0380350:intron | 35.0% |
TTCCACCTATCATTAGTGAA+CGG | - | chr3_1:82022438-82022457 | None:intergenic | 35.0% | |
CCTGTGACAATAATAAATCC+AGG | - | chr3_1:82022462-82022481 | None:intergenic | 35.0% | |
CCTGGATTTATTATTGTCAC+AGG | + | chr3_1:82022459-82022478 | Msa0380350:CDS | 35.0% | |
TGCTCGTATATGTGCATATT+TGG | + | chr3_1:82022603-82022622 | Msa0380350:intron | 35.0% | |
GCTCGTATATGTGCATATTT+GGG | + | chr3_1:82022604-82022623 | Msa0380350:intron | 35.0% | |
! | TGCTATTGATTATTGCATGG+AGG | + | chr3_1:82022877-82022896 | Msa0380350:CDS | 35.0% |
AATGTTCAAGACACTGAATG+AGG | - | chr3_1:82023074-82023093 | None:intergenic | 35.0% | |
GTGTCTTGAACATTTGTTCT+AGG | + | chr3_1:82023080-82023099 | Msa0380350:intron | 35.0% | |
TACTTGTATATACTGCCACA+GGG | - | chr3_1:82023156-82023175 | None:intergenic | 35.0% | |
!! | TGAACTGGAAAAGTATCATG+AGG | + | chr3_1:82023213-82023232 | Msa0380350:intron | 35.0% |
GAAATGGAAACAGATCAAAG+AGG | + | chr3_1:82023407-82023426 | Msa0380350:intron | 35.0% | |
ATGTTAAGCACAGATCAAAG+AGG | + | chr3_1:82023462-82023481 | Msa0380350:intron | 35.0% | |
CTCAAAATGTGCTTAACCTT+AGG | - | chr3_1:82023516-82023535 | None:intergenic | 35.0% | |
!! | TATTAGGTAATGGGGTGATT+TGG | + | chr3_1:82023616-82023635 | Msa0380350:intron | 35.0% |
! | AATAAGCTCACAAGTCTTGT+TGG | - | chr3_1:82023808-82023827 | None:intergenic | 35.0% |
!! | CTGGTTTTCGTTCATTTTCT+TGG | + | chr3_1:82023935-82023954 | Msa0380350:intron | 35.0% |
AGTGTCAAAAAGCCTCTTAA+TGG | - | chr3_1:82024025-82024044 | None:intergenic | 35.0% | |
!! | AATTGTACCTTTGAGATTGG+GGG | - | chr3_1:82024069-82024088 | None:intergenic | 35.0% |
!! | GAATTGTACCTTTGAGATTG+GGG | - | chr3_1:82024070-82024089 | None:intergenic | 35.0% |
!! | GGAATTGTACCTTTGAGATT+GGG | - | chr3_1:82024071-82024090 | None:intergenic | 35.0% |
!! | AGGAATTGTACCTTTGAGAT+TGG | - | chr3_1:82024072-82024091 | None:intergenic | 35.0% |
AATGAAAATACCTGTACTGC+CGG | - | chr3_1:82024205-82024224 | None:intergenic | 35.0% | |
ACTACAGTCTCAAATTCGAA+CGG | - | chr3_1:82024305-82024324 | None:intergenic | 35.0% | |
CGGTGGTGATAAAAATTTAC+AGG | - | chr3_1:82024410-82024429 | None:intergenic | 35.0% | |
CACTGAAGCTTATTTCAGTT+AGG | + | chr3_1:82024440-82024459 | Msa0380350:intron | 35.0% | |
TAGTATATTTCCTCTGCACT+AGG | - | chr3_1:82024502-82024521 | None:intergenic | 35.0% | |
CAATCGCATTATCAAAGAAC+TGG | - | chr3_1:82024618-82024637 | None:intergenic | 35.0% | |
!! | CAGTTCTTTGATAATGCGAT+TGG | + | chr3_1:82024616-82024635 | Msa0380350:intron | 35.0% |
AAATCTGATGTTGCATCCAA+GGG | - | chr3_1:82024670-82024689 | None:intergenic | 35.0% | |
TAAATCTGATGTTGCATCCA+AGG | - | chr3_1:82024671-82024690 | None:intergenic | 35.0% | |
TGACTGCAAGGATACATAAT+TGG | - | chr3_1:82024780-82024799 | None:intergenic | 35.0% | |
! | GATCTATACACTTCTAGAGA+AGG | + | chr3_1:82024800-82024819 | Msa0380350:CDS | 35.0% |
! | TATCACAGGATTTAAAGCGT+CGG | - | chr3_1:82024852-82024871 | None:intergenic | 35.0% |
AGGGAATAAAAACAAGGCAT+GGG | - | chr3_1:82024926-82024945 | None:intergenic | 35.0% | |
AAGGGAATAAAAACAAGGCA+TGG | - | chr3_1:82024927-82024946 | None:intergenic | 35.0% | |
! | AAATCCATTCCAAGTATCGT+GGG | + | chr3_1:82025003-82025022 | Msa0380350:CDS | 35.0% |
TTGGATAGTTTGATTGTGAG+AGG | + | chr3_1:82025027-82025046 | Msa0380350:CDS | 35.0% | |
TGGGGCAAATATTACTTTGA+AGG | + | chr3_1:82025062-82025081 | Msa0380350:CDS | 35.0% | |
ACTAAGTGAAGTATGGAGTA+TGG | - | chr3_1:82025175-82025194 | None:intergenic | 35.0% | |
!! | CACTCTAAGGTGAAAAAAAC+GGG | - | chr3_1:82025351-82025370 | None:intergenic | 35.0% |
!! | CCACTCTAAGGTGAAAAAAA+CGG | - | chr3_1:82025352-82025371 | None:intergenic | 35.0% |
!!! | CGTTTTTTTCACCTTAGAGT+GGG | + | chr3_1:82025350-82025369 | Msa0380350:intron | 35.0% |
TATGGTGTATCAGAGAAAGT+CGG | + | chr3_1:82025376-82025395 | Msa0380350:intron | 35.0% | |
TATCAGAGAAAGTCGGAATT+AGG | + | chr3_1:82025383-82025402 | Msa0380350:intron | 35.0% | |
TCTGATATTGCACTGCAATT+TGG | - | chr3_1:82025541-82025560 | None:intergenic | 35.0% | |
!! | AATATGGGGATTTGTTGATG+TGG | + | chr3_1:82025570-82025589 | Msa0380350:intron | 35.0% |
AGCGCATGAATAGTATTGTT+AGG | + | chr3_1:82025643-82025662 | Msa0380350:intron | 35.0% | |
GCGCATGAATAGTATTGTTA+GGG | + | chr3_1:82025644-82025663 | Msa0380350:intron | 35.0% | |
!! | TTCATCATGCAAGAGTACTT+TGG | + | chr3_1:82025841-82025860 | Msa0380350:intron | 35.0% |
!! | TCATCATGCAAGAGTACTTT+GGG | + | chr3_1:82025842-82025861 | Msa0380350:intron | 35.0% |
GATTATCCAGGAAAGAGATA+AGG | - | chr3_1:82025975-82025994 | None:intergenic | 35.0% | |
AAACTGATGTATCTCTTTCC+TGG | - | chr3_1:82025997-82026016 | None:intergenic | 35.0% | |
! | TAAGTTTTCTGCTTTCCATG+TGG | + | chr3_1:82026137-82026156 | Msa0380350:intron | 35.0% |
TGTCAATCTTCTATTCCACA+TGG | - | chr3_1:82026155-82026174 | None:intergenic | 35.0% | |
ATACAATCCATAGGTCTTTC+AGG | - | chr3_1:82026315-82026334 | None:intergenic | 35.0% | |
TGGAGTTGTGATTGAGAATA+AGG | + | chr3_1:82026422-82026441 | Msa0380350:CDS | 35.0% | |
ACTGGTATAACAGACATCAT+TGG | + | chr3_1:82026574-82026593 | Msa0380350:intron | 35.0% | |
!! | TATGACTGGTTTGAATGATG+TGG | - | chr3_1:82026979-82026998 | None:intergenic | 35.0% |
!!! | GGCTTTGGAATTTTTATGAC+TGG | - | chr3_1:82026993-82027012 | None:intergenic | 35.0% |
!! | GTCCAATTAAAGGAAGTATC+AGG | - | chr3_1:82027028-82027047 | None:intergenic | 35.0% |
! | TGAACCGACTTTATTTAACC+GGG | + | chr3_1:82027182-82027201 | Msa0380350:intron | 35.0% |
TGTTCCCGGTTAAATAAAGT+CGG | - | chr3_1:82027189-82027208 | None:intergenic | 35.0% | |
CAATTGAAAGGGAACATTGA+GGG | - | chr3_1:82027218-82027237 | None:intergenic | 35.0% | |
AATGTTCCCTTTCAATTGCT+AGG | + | chr3_1:82027220-82027239 | Msa0380350:intron | 35.0% | |
CTGTTACTGAAACTAAACAG+AGG | + | chr3_1:82027499-82027518 | Msa0380350:intron | 35.0% | |
TGAACAGGACAAGGAAATTA+AGG | + | chr3_1:82027544-82027563 | Msa0380350:intron | 35.0% | |
GAGTAAGGTTTCCAAAGTTT+GGG | - | chr3_1:82027607-82027626 | None:intergenic | 35.0% | |
! | CAAACTTTGGAAACCTTACT+CGG | + | chr3_1:82027606-82027625 | Msa0380350:intron | 35.0% |
AATAAACAAATGGGGAGGAA+AGG | - | chr3_1:82027652-82027671 | None:intergenic | 35.0% | |
! | TGGCTTGGAATAAACAAATG+GGG | - | chr3_1:82027660-82027679 | None:intergenic | 35.0% |
! | GATGGCTTGGAATAAACAAA+TGG | - | chr3_1:82027662-82027681 | None:intergenic | 35.0% |
ACAAAGGAATGGAATGTGTT+GGG | - | chr3_1:82027725-82027744 | None:intergenic | 35.0% | |
!! | GAACCGTTCATTTTAATCTG+AGG | - | chr3_1:82027882-82027901 | None:intergenic | 35.0% |
TAACCAACACAGAGAAGAAA+AGG | + | chr3_1:82027963-82027982 | Msa0380350:intron | 35.0% | |
! | TTTCCTTTTCTTCTCTGTGT+TGG | - | chr3_1:82027969-82027988 | None:intergenic | 35.0% |
!! | TTGATGTCTTCTTTTGAGTG+TGG | - | chr3_1:82028046-82028065 | None:intergenic | 35.0% |
CAATGCATAACCAACTCAAA+AGG | - | chr3_1:82028177-82028196 | None:intergenic | 35.0% | |
AGATGAAATTGAAGGAGGAA+AGG | + | chr3_1:82028211-82028230 | Msa0380350:intron | 35.0% | |
GATGAAATTGAAGGAGGAAA+GGG | + | chr3_1:82028212-82028231 | Msa0380350:intron | 35.0% | |
ATGTTCGTAGGCATACTATT+AGG | - | chr3_1:82028411-82028430 | None:intergenic | 35.0% | |
GCTGAAATTGTCATAAATGC+TGG | - | chr3_1:82028540-82028559 | None:intergenic | 35.0% | |
TGCAGATATCCAAGAATGAA+TGG | + | chr3_1:82028667-82028686 | Msa0380350:exon | 35.0% | |
ATTGGTGAACCATTCATTCT+TGG | - | chr3_1:82028679-82028698 | None:intergenic | 35.0% | |
AAACAAATACCCCTCAACAT+TGG | - | chr3_1:82028697-82028716 | None:intergenic | 35.0% | |
! | AGCTTTGTAACTGTATTGCA+CGG | - | chr3_1:82028754-82028773 | None:intergenic | 35.0% |
!!! | CAGTTAGCTTTTCTCTTTAC+TGG | + | chr3_1:82028780-82028799 | Msa0380350:three_prime_UTR | 35.0% |
GAAGAGACTATGTAGTATCA+AGG | - | chr3_1:82028967-82028986 | None:intergenic | 35.0% | |
TTGTTTACTGTACAACGAGT+TGG | + | chr3_1:82028989-82029008 | Msa0380350:three_prime_UTR | 35.0% | |
!! | GTAAGATTTTGTTGTACCGT+CGG | - | chr3_1:82029087-82029106 | None:intergenic | 35.0% |
AAGCTGAAATAAGAGGGAGA+GGG | - | chr3_1:82019763-82019782 | None:intergenic | 40.0% | |
!!! | TGGATAAGTTTTGATTGCGG+TGG | - | chr3_1:82019820-82019839 | None:intergenic | 40.0% |
!! | GTAAGTATTCTTTGGAACGG+CGG | - | chr3_1:82019879-82019898 | None:intergenic | 40.0% |
CTTAGCACAAATGCACACAT+TGG | + | chr3_1:82020064-82020083 | Msa0380350:CDS | 40.0% | |
GAGCTTATGTCCAAAAAGGT+TGG | + | chr3_1:82020271-82020290 | Msa0380350:CDS | 40.0% | |
TTGCGAGATCGAAACTTCTT+GGG | - | chr3_1:82020361-82020380 | None:intergenic | 40.0% | |
ATCGACAATGACGATGCAAT+CGG | - | chr3_1:82020416-82020435 | None:intergenic | 40.0% | |
CAAGTCTTCTGTTATCGATG+AGG | + | chr3_1:82020444-82020463 | Msa0380350:CDS | 40.0% | |
AATTGAACAGAGGGGTTAAC+AGG | - | chr3_1:82020553-82020572 | None:intergenic | 40.0% | |
AACTTCTTGACGATCATCTG+AGG | + | chr3_1:82020644-82020663 | Msa0380350:CDS | 40.0% | |
ACTTCTTGACGATCATCTGA+GGG | + | chr3_1:82020645-82020664 | Msa0380350:CDS | 40.0% | |
ATTACTCTTCTCCTTCTCCT+TGG | - | chr3_1:82020683-82020702 | None:intergenic | 40.0% | |
GGAGAAGGAGAAGAGTAATT+TGG | + | chr3_1:82020684-82020703 | Msa0380350:CDS | 40.0% | |
AGTAATTTGGCAGCTAAGCT+TGG | + | chr3_1:82020697-82020716 | Msa0380350:CDS | 40.0% | |
AAGGGTGATATAGCATCGTA+GGG | - | chr3_1:82020736-82020755 | None:intergenic | 40.0% | |
AAAACCCATATTTGTTCCGG+AGG | - | chr3_1:82020912-82020931 | None:intergenic | 40.0% | |
TATCGAGGAATGCTTACTTG+AGG | - | chr3_1:82020940-82020959 | None:intergenic | 40.0% | |
TTGCAGATCTACATGAAAGC+AGG | - | chr3_1:82021023-82021042 | None:intergenic | 40.0% | |
GCTTTCATGTAGATCTGCAA+TGG | + | chr3_1:82021023-82021042 | Msa0380350:intron | 40.0% | |
! | AATATTTTGCAACAGGCCCA+AGG | - | chr3_1:82021151-82021170 | None:intergenic | 40.0% |
! | CCATCTGATAATGTTAGCTC+TGG | - | chr3_1:82021625-82021644 | None:intergenic | 40.0% |
CCAGAGCTAACATTATCAGA+TGG | + | chr3_1:82021622-82021641 | Msa0380350:CDS | 40.0% | |
ATCAGATGGACATAGCAGTA+AGG | + | chr3_1:82021636-82021655 | Msa0380350:CDS | 40.0% | |
TTCCGTTCACTAATGATAGG+TGG | + | chr3_1:82022433-82022452 | Msa0380350:CDS | 40.0% | |
TTAAGTCTCAATCCATGGTC+AGG | - | chr3_1:82022794-82022813 | None:intergenic | 40.0% | |
ATCACATTAGACGAATGGCT+TGG | - | chr3_1:82023011-82023030 | None:intergenic | 40.0% | |
TTCAAGACACTGAATGAGGA+GGG | - | chr3_1:82023070-82023089 | None:intergenic | 40.0% | |
CTACTTGTATATACTGCCAC+AGG | - | chr3_1:82023157-82023176 | None:intergenic | 40.0% | |
ATCCATTGCACTTATCTGCA+TGG | + | chr3_1:82023551-82023570 | Msa0380350:intron | 40.0% | |
CAAACATGTGAGTGAAATGC+TGG | + | chr3_1:82023916-82023935 | Msa0380350:intron | 40.0% | |
ATAAGAGAGCAGTAGAATGC+TGG | - | chr3_1:82024105-82024124 | None:intergenic | 40.0% | |
TTGATCATAGTCATCCTCCT+GGG | - | chr3_1:82024155-82024174 | None:intergenic | 40.0% | |
TTTGATCATAGTCATCCTCC+TGG | - | chr3_1:82024156-82024175 | None:intergenic | 40.0% | |
TAGTTAATCTGCAATGGTGC+AGG | + | chr3_1:82024354-82024373 | Msa0380350:intron | 40.0% | |
AGCTTCAGTGTTTATAGCAC+CGG | - | chr3_1:82024430-82024449 | None:intergenic | 40.0% | |
TCCTCTGCACTAGGTTATAA+AGG | - | chr3_1:82024493-82024512 | None:intergenic | 40.0% | |
AACAAAACGAGATTCGGGTA+TGG | - | chr3_1:82024647-82024666 | None:intergenic | 40.0% | |
AAGGGAACAAAACGAGATTC+GGG | - | chr3_1:82024652-82024671 | None:intergenic | 40.0% | |
CAAGGGAACAAAACGAGATT+CGG | - | chr3_1:82024653-82024672 | None:intergenic | 40.0% | |
ATCAGATTTACTGCTTCTGC+AGG | + | chr3_1:82024681-82024700 | Msa0380350:CDS | 40.0% | |
AGTGTATAGATCTGACTGCA+AGG | - | chr3_1:82024792-82024811 | None:intergenic | 40.0% | |
ATGTTCCATTCTCAGATTGC+TGG | + | chr3_1:82024964-82024983 | Msa0380350:intron | 40.0% | |
! | CAAATCCATTCCAAGTATCG+TGG | + | chr3_1:82025002-82025021 | Msa0380350:CDS | 40.0% |
! | AATCCATTCCAAGTATCGTG+GGG | + | chr3_1:82025004-82025023 | Msa0380350:CDS | 40.0% |
!!! | CCGTTTTTTTCACCTTAGAG+TGG | + | chr3_1:82025349-82025368 | Msa0380350:intron | 40.0% |
!! | TAGGTTAGCCTGCATTATGA+GGG | + | chr3_1:82025602-82025621 | Msa0380350:intron | 40.0% |
AGTTTATCCTACAAGGACCA+AGG | - | chr3_1:82025693-82025712 | None:intergenic | 40.0% | |
TTGGTCCTTGTAGGATAAAC+TGG | + | chr3_1:82025692-82025711 | Msa0380350:intron | 40.0% | |
GGGTTTGAAGAAGCAAAACA+TGG | + | chr3_1:82025862-82025881 | Msa0380350:intron | 40.0% | |
ACCTTACCTTATCTCTTTCC+TGG | + | chr3_1:82025966-82025985 | Msa0380350:intron | 40.0% | |
TCCAGGAAAGAGATAAGGTA+AGG | - | chr3_1:82025970-82025989 | None:intergenic | 40.0% | |
ATCTCTTTCCTGGATAATCC+AGG | + | chr3_1:82025976-82025995 | Msa0380350:intron | 40.0% | |
ATCTCTTTCCTGGATTATCC+AGG | - | chr3_1:82025987-82026006 | None:intergenic | 40.0% | |
CGTGACTATTGTTGCAAAAC+CGG | + | chr3_1:82026377-82026396 | Msa0380350:CDS | 40.0% | |
GTGACTATTGTTGCAAAACC+GGG | + | chr3_1:82026378-82026397 | Msa0380350:CDS | 40.0% | |
GGAATTTCCAATTTCAAGCC+CGG | - | chr3_1:82026399-82026418 | None:intergenic | 40.0% | |
TTCTCAATCACAACTCCATC+TGG | - | chr3_1:82026420-82026439 | None:intergenic | 40.0% | |
TGCATGAGATATTTGCAGTC+TGG | - | chr3_1:82026673-82026692 | None:intergenic | 40.0% | |
TATCTCATGCACGATTCCAA+TGG | + | chr3_1:82026682-82026701 | Msa0380350:intron | 40.0% | |
AATTTCAGAGTCCAGCAGAA+AGG | - | chr3_1:82026762-82026781 | None:intergenic | 40.0% | |
AAAAGGACCAAGTTTGAGCA+TGG | - | chr3_1:82026893-82026912 | None:intergenic | 40.0% | |
!!! | TTTTGAAACTGGCCCTCTAA+CGG | + | chr3_1:82026919-82026938 | Msa0380350:intron | 40.0% |
GCCCTGATACTTCCTTTAAT+TGG | + | chr3_1:82027023-82027042 | Msa0380350:intron | 40.0% | |
!!! | AATGCTGCAAGTTGCTTTTC+AGG | + | chr3_1:82027099-82027118 | Msa0380350:intron | 40.0% |
GGTTCAAGAATCACATGCTA+AGG | - | chr3_1:82027168-82027187 | None:intergenic | 40.0% | |
GCAATTGAAAGGGAACATTG+AGG | - | chr3_1:82027219-82027238 | None:intergenic | 40.0% | |
ATGCTGCCTAGCAATTGAAA+GGG | - | chr3_1:82027229-82027248 | None:intergenic | 40.0% | |
ACTTGAAGTACATGCTGCAT+TGG | + | chr3_1:82027255-82027274 | Msa0380350:intron | 40.0% | |
CTACATAGATCTCTGTGAAC+AGG | + | chr3_1:82027529-82027548 | Msa0380350:intron | 40.0% | |
ATTGAGCGGTAGGCTATTTA+AGG | + | chr3_1:82027574-82027593 | Msa0380350:intron | 40.0% | |
! | AGGTTTCCAAAGTTTGGGAT+AGG | - | chr3_1:82027602-82027621 | None:intergenic | 40.0% |
CGAGTAAGGTTTCCAAAGTT+TGG | - | chr3_1:82027608-82027627 | None:intergenic | 40.0% | |
CTTGGAATAAACAAATGGGG+AGG | - | chr3_1:82027657-82027676 | None:intergenic | 40.0% | |
GACAAAGGAATGGAATGTGT+TGG | - | chr3_1:82027726-82027745 | None:intergenic | 40.0% | |
!! | TGAGAGGAGTATTTAGTGAG+AGG | + | chr3_1:82027836-82027855 | Msa0380350:intron | 40.0% |
AGTATTTAGTGAGAGGTGAC+AGG | + | chr3_1:82027843-82027862 | Msa0380350:intron | 40.0% | |
!! | TTTTGAGTGTGGATGCTTTG+GGG | - | chr3_1:82028035-82028054 | None:intergenic | 40.0% |
!! | CTTTTGAGTGTGGATGCTTT+GGG | - | chr3_1:82028036-82028055 | None:intergenic | 40.0% |
!! | TCTTTTGAGTGTGGATGCTT+TGG | - | chr3_1:82028037-82028056 | None:intergenic | 40.0% |
! | GTATCAGAAGTACACAATCC+TGG | - | chr3_1:82028076-82028095 | None:intergenic | 40.0% |
!! | ACCAGTTGATAGAACCTTGT+AGG | + | chr3_1:82028094-82028113 | Msa0380350:intron | 40.0% |
TCCTACAAGGTTCTATCAAC+TGG | - | chr3_1:82028098-82028117 | None:intergenic | 40.0% | |
GTATTCGTACGAATCCTACA+AGG | - | chr3_1:82028111-82028130 | None:intergenic | 40.0% | |
GATTCGTACGAATACTGAAC+AGG | + | chr3_1:82028116-82028135 | Msa0380350:intron | 40.0% | |
GCATAACCAACTCAAAAGGA+AGG | - | chr3_1:82028173-82028192 | None:intergenic | 40.0% | |
TGTACTAGTAACTGGTTGGT+TGG | - | chr3_1:82028289-82028308 | None:intergenic | 40.0% | |
TAAATAGAGTAAGGGAGAGC+AGG | - | chr3_1:82028328-82028347 | None:intergenic | 40.0% | |
GTCGTTGATCTCCTGTAAAT+TGG | - | chr3_1:82028645-82028664 | None:intergenic | 40.0% | |
TGAATGGTTCACCAATGTTG+AGG | + | chr3_1:82028683-82028702 | Msa0380350:exon | 40.0% | |
GAATGGTTCACCAATGTTGA+GGG | + | chr3_1:82028684-82028703 | Msa0380350:exon | 40.0% | |
AATGGTTCACCAATGTTGAG+GGG | + | chr3_1:82028685-82028704 | Msa0380350:exon | 40.0% | |
AGCTGAAATAAGAGGGAGAG+GGG | - | chr3_1:82019762-82019781 | None:intergenic | 45.0% | |
CAAGCTGAAATAAGAGGGAG+AGG | - | chr3_1:82019764-82019783 | None:intergenic | 45.0% | |
CGACGCAAGCTGAAATAAGA+GGG | - | chr3_1:82019769-82019788 | None:intergenic | 45.0% | |
ACGACGCAAGCTGAAATAAG+AGG | - | chr3_1:82019770-82019789 | None:intergenic | 45.0% | |
GATCGTACTAACAACGACGA+TGG | - | chr3_1:82019840-82019859 | None:intergenic | 45.0% | |
AATGATGAGTGGCGACTTGA+CGG | - | chr3_1:82020090-82020109 | None:intergenic | 45.0% | |
TGATTGCCATTCTGTTGCGA+AGG | - | chr3_1:82020132-82020151 | None:intergenic | 45.0% | |
TCTTCCCTTGCTCGTCATAA+TGG | + | chr3_1:82020202-82020221 | Msa0380350:CDS | 45.0% | |
! | GCTGTAGCATCCAACCTTTT+TGG | - | chr3_1:82020284-82020303 | None:intergenic | 45.0% |
GTTGCGAGATCGAAACTTCT+TGG | - | chr3_1:82020362-82020381 | None:intergenic | 45.0% | |
CGCAACAAGAAACTCTGCTT+CGG | + | chr3_1:82020376-82020395 | Msa0380350:CDS | 45.0% | |
TCGACAATGACGATGCAATC+GGG | - | chr3_1:82020415-82020434 | None:intergenic | 45.0% | |
GAATCGACAAGAGCGACAAT+TGG | - | chr3_1:82020487-82020506 | None:intergenic | 45.0% | |
AAGCAATGCGGCTGAAAGTA+TGG | - | chr3_1:82020522-82020541 | None:intergenic | 45.0% | |
CAGGAATGGGATAAGCAATG+CGG | - | chr3_1:82020534-82020553 | None:intergenic | 45.0% | |
ACAGAGGGGTTAACAGGAAT+GGG | - | chr3_1:82020547-82020566 | None:intergenic | 45.0% | |
AACAGAGGGGTTAACAGGAA+TGG | - | chr3_1:82020548-82020567 | None:intergenic | 45.0% | |
! | CTTCTCGAGAAGCAGTGTTT+TGG | - | chr3_1:82020602-82020621 | None:intergenic | 45.0% |
AGGGTGATATAGCATCGTAG+GGG | - | chr3_1:82020735-82020754 | None:intergenic | 45.0% | |
CAAGGGTGATATAGCATCGT+AGG | - | chr3_1:82020737-82020756 | None:intergenic | 45.0% | |
TGGTGTACTACTACCTTGAG+GGG | - | chr3_1:82020761-82020780 | None:intergenic | 45.0% | |
GTGGTGTACTACTACCTTGA+GGG | - | chr3_1:82020762-82020781 | None:intergenic | 45.0% | |
TGTGGTGTACTACTACCTTG+AGG | - | chr3_1:82020763-82020782 | None:intergenic | 45.0% | |
TTGAAGCTCAATCATGCCTC+CGG | + | chr3_1:82020893-82020912 | Msa0380350:CDS | 45.0% | |
TCATGCCTCCGGAACAAATA+TGG | + | chr3_1:82020904-82020923 | Msa0380350:CDS | 45.0% | |
CATGCCTCCGGAACAAATAT+GGG | + | chr3_1:82020905-82020924 | Msa0380350:CDS | 45.0% | |
TAGACCCTCAACTCCAAGTA+CGG | + | chr3_1:82021299-82021318 | Msa0380350:intron | 45.0% | |
! | AAAAGTGCGCACATCAATGC+TGG | - | chr3_1:82021501-82021520 | None:intergenic | 45.0% |
! | TGATGTGCGCACTTTTAAGC+AGG | + | chr3_1:82021505-82021524 | Msa0380350:CDS | 45.0% |
AGATGGACATAGCAGTAAGG+AGG | + | chr3_1:82021639-82021658 | Msa0380350:CDS | 45.0% | |
GTATGCATCTAAGCTACTGC+TGG | - | chr3_1:82021838-82021857 | None:intergenic | 45.0% | |
GATAGTTTGACCGTTAGGCA+TGG | - | chr3_1:82022256-82022275 | None:intergenic | 45.0% | |
TGCAGGCATACATTTGACGA+TGG | + | chr3_1:82022403-82022422 | Msa0380350:intron | 45.0% | |
ACTAATGATAGGTGGAACCC+TGG | + | chr3_1:82022441-82022460 | Msa0380350:CDS | 45.0% | |
TGTGATGAAGTGCGACAATG+TGG | + | chr3_1:82022697-82022716 | Msa0380350:CDS | 45.0% | |
GTGATGAAGTGCGACAATGT+GGG | + | chr3_1:82022698-82022717 | Msa0380350:CDS | 45.0% | |
ATTCAATGGCTTCCTGACCA+TGG | + | chr3_1:82022779-82022798 | Msa0380350:intron | 45.0% | |
GTGAAGTAGCAGTGTTACAC+AGG | - | chr3_1:82022926-82022945 | None:intergenic | 45.0% | |
GTTCAAGACACTGAATGAGG+AGG | - | chr3_1:82023071-82023090 | None:intergenic | 45.0% | |
ATACTGCCACAGGGTAAAAC+TGG | - | chr3_1:82023147-82023166 | None:intergenic | 45.0% | |
GACCATGCAGATAAGTGCAA+TGG | - | chr3_1:82023556-82023575 | None:intergenic | 45.0% | |
TGCACTTATCTGCATGGTCA+AGG | + | chr3_1:82023557-82023576 | Msa0380350:intron | 45.0% | |
GAATTAGTAGGTCCTGACTC+AGG | - | chr3_1:82023584-82023603 | None:intergenic | 45.0% | |
TCTCGTTTGGTCCTCTGTAT+AGG | + | chr3_1:82023983-82024002 | Msa0380350:intron | 45.0% | |
GTTTGGTCCTCTGTATAGGT+GGG | + | chr3_1:82023987-82024006 | Msa0380350:intron | 45.0% | |
AAACTCACCCACCTATACAG+AGG | - | chr3_1:82023997-82024016 | None:intergenic | 45.0% | |
CTTCTACAAGGAACAGATGC+TGG | + | chr3_1:82024178-82024197 | Msa0380350:CDS | 45.0% | |
! | TTCAGTGTTTATAGCACCGG+TGG | - | chr3_1:82024427-82024446 | None:intergenic | 45.0% |
GCCTTTATAACCTAGTGCAG+AGG | + | chr3_1:82024489-82024508 | Msa0380350:intron | 45.0% | |
!! | CGAATCTCGTTTTGTTCCCT+TGG | + | chr3_1:82024651-82024670 | Msa0380350:CDS | 45.0% |
!! | TTTAAAGCGTCGGTTCTAGC+TGG | - | chr3_1:82024842-82024861 | None:intergenic | 45.0% |
CTTGGGACCCGAATATGAAA+AGG | + | chr3_1:82024874-82024893 | Msa0380350:CDS | 45.0% | |
GAAAGCCAGCAATCTGAGAA+TGG | - | chr3_1:82024972-82024991 | None:intergenic | 45.0% | |
!! | AGATTGCTGGCTTTCGAAGT+CGG | + | chr3_1:82024977-82024996 | Msa0380350:intron | 45.0% |
TGGACCCTCTAGACAATTGA+AGG | - | chr3_1:82025155-82025174 | None:intergenic | 45.0% | |
GGTGAAAAAAACGGGAGAGT+GGG | - | chr3_1:82025343-82025362 | None:intergenic | 45.0% | |
AGGTGAAAAAAACGGGAGAG+TGG | - | chr3_1:82025344-82025363 | None:intergenic | 45.0% | |
TCACCTTAGAGTGGGATGTA+TGG | + | chr3_1:82025358-82025377 | Msa0380350:intron | 45.0% | |
ACACCATACATCCCACTCTA+AGG | - | chr3_1:82025364-82025383 | None:intergenic | 45.0% | |
GTTGATGTGGCCAAGTTAGT+AGG | + | chr3_1:82025583-82025602 | Msa0380350:intron | 45.0% | |
TGCAGGCTAACCTACTAACT+TGG | - | chr3_1:82025596-82025615 | None:intergenic | 45.0% | |
!! | GTAGGTTAGCCTGCATTATG+AGG | + | chr3_1:82025601-82025620 | Msa0380350:intron | 45.0% |
AGGAAAATTGAGCCTGTGCA+TGG | - | chr3_1:82025889-82025908 | None:intergenic | 45.0% | |
! | TGACCTTTTACCCGCTATCA+GGG | + | chr3_1:82026351-82026370 | Msa0380350:intron | 45.0% |
TGCAAAACCGGGCTTGAAAT+TGG | + | chr3_1:82026389-82026408 | Msa0380350:CDS | 45.0% | |
GATTCCAATGGTTCTCCAAC+CGG | + | chr3_1:82026694-82026713 | Msa0380350:intron | 45.0% | |
ATTCCAATGGTTCTCCAACC+GGG | + | chr3_1:82026695-82026714 | Msa0380350:intron | 45.0% | |
TCAAGATTATGACTCCCGGT+TGG | - | chr3_1:82026712-82026731 | None:intergenic | 45.0% | |
TCTCATGCCATGCTCAAACT+TGG | + | chr3_1:82026883-82026902 | Msa0380350:intron | 45.0% | |
AATTCCAAAGCCATCTCCCT+CGG | + | chr3_1:82027001-82027020 | Msa0380350:intron | 45.0% | |
CATTGAAGCAGACAAGTTGC+TGG | - | chr3_1:82027083-82027102 | None:intergenic | 45.0% | |
CATGCTGCCTAGCAATTGAA+AGG | - | chr3_1:82027230-82027249 | None:intergenic | 45.0% | |
AGATCTCTGTGAACAGGACA+AGG | + | chr3_1:82027535-82027554 | Msa0380350:intron | 45.0% | |
AGGAATGACAATTGAGCGGT+AGG | + | chr3_1:82027564-82027583 | Msa0380350:intron | 45.0% | |
! | AAGGTGCCTATCCCAAACTT+TGG | + | chr3_1:82027593-82027612 | Msa0380350:intron | 45.0% |
AGATATCCAGGAACCGAGTA+AGG | - | chr3_1:82027622-82027641 | None:intergenic | 45.0% | |
!! | AAAGGTGCTGAGAGATATCC+AGG | - | chr3_1:82027634-82027653 | None:intergenic | 45.0% |
AACAACAGGATGGTAAGGGA+AGG | - | chr3_1:82027691-82027710 | None:intergenic | 45.0% | |
CTGCAACAACAGGATGGTAA+GGG | - | chr3_1:82027695-82027714 | None:intergenic | 45.0% | |
TTTCAGCTGCAACAACAGGA+TGG | - | chr3_1:82027701-82027720 | None:intergenic | 45.0% | |
AGATGAGGGTGACAAAGGAA+TGG | - | chr3_1:82027736-82027755 | None:intergenic | 45.0% | |
AGAGAGAGAGAGAGAGATGA+GGG | - | chr3_1:82027750-82027769 | None:intergenic | 45.0% | |
!! | TGTGTTGGTTAGTACACGTG+CGG | - | chr3_1:82027954-82027973 | None:intergenic | 45.0% |
GTGAACTTCCACAAACTGCT+AGG | + | chr3_1:82028242-82028261 | Msa0380350:intron | 45.0% | |
! | CTGGTTGGTTGGAAAAGACT+AGG | - | chr3_1:82028278-82028297 | None:intergenic | 45.0% |
GGAATGTGTATGTTAGGTGC+AGG | - | chr3_1:82028390-82028409 | None:intergenic | 45.0% | |
TCATAATCCCCATGCTCTTC+AGG | - | chr3_1:82028464-82028483 | None:intergenic | 45.0% | |
TCTCTTTACTGGGAACCGAA+AGG | + | chr3_1:82028791-82028810 | Msa0380350:three_prime_UTR | 45.0% | |
GCAACAGTTGTCACGCATAG+AGG | - | chr3_1:82019677-82019696 | None:intergenic | 50.0% | |
ATTGACAAAGGCGGTGTGGA+CGG | - | chr3_1:82019730-82019749 | None:intergenic | 50.0% | |
GCTGAAATAAGAGGGAGAGG+GGG | - | chr3_1:82019761-82019780 | None:intergenic | 50.0% | |
!! | TTTTGATTGCGGTGGCGAGA+CGG | - | chr3_1:82019812-82019831 | None:intergenic | 50.0% |
TTACGGCCTTCGCAACAGAA+TGG | + | chr3_1:82020123-82020142 | Msa0380350:CDS | 50.0% | |
GCGACCATTATGACGAGCAA+GGG | - | chr3_1:82020209-82020228 | None:intergenic | 50.0% | |
AGCGACCATTATGACGAGCA+AGG | - | chr3_1:82020210-82020229 | None:intergenic | 50.0% | |
GCCAGAGAGAATTGGAAGAG+GGG | - | chr3_1:82020306-82020325 | None:intergenic | 50.0% | |
CGCCAGAGAGAATTGGAAGA+GGG | - | chr3_1:82020307-82020326 | None:intergenic | 50.0% | |
ACGCCAGAGAGAATTGGAAG+AGG | - | chr3_1:82020308-82020327 | None:intergenic | 50.0% | |
TCCAATTCTCTCTGGCGTAC+TGG | + | chr3_1:82020310-82020329 | Msa0380350:CDS | 50.0% | |
ACCAGTACGCCAGAGAGAAT+TGG | - | chr3_1:82020314-82020333 | None:intergenic | 50.0% | |
AATTCTCTCTGGCGTACTGG+TGG | + | chr3_1:82020313-82020332 | Msa0380350:CDS | 50.0% | |
CTTCTTGGGACTGTTGCTGT+TGG | - | chr3_1:82020347-82020366 | None:intergenic | 50.0% | |
ACAATGACGATGCAATCGGG+AGG | - | chr3_1:82020412-82020431 | None:intergenic | 50.0% | |
! | ATGCGGCTGAAAGTATGGAG+AGG | - | chr3_1:82020517-82020536 | None:intergenic | 50.0% |
ACAACAAGCTGCCAAGGAGA+AGG | + | chr3_1:82020669-82020688 | Msa0380350:CDS | 50.0% | |
GGTGTACTACTACCTTGAGG+GGG | - | chr3_1:82020760-82020779 | None:intergenic | 50.0% | |
GCTTCCGTACTTGGAGTTGA+GGG | - | chr3_1:82021306-82021325 | None:intergenic | 50.0% | |
TCAACTCCAAGTACGGAAGC+CGG | + | chr3_1:82021306-82021325 | Msa0380350:CDS | 50.0% | |
GCAACAGCTAGGCCATATGA+AGG | - | chr3_1:82021816-82021835 | None:intergenic | 50.0% | |
CGTTTGGTCCTCTGTATAGG+TGG | + | chr3_1:82023986-82024005 | Msa0380350:intron | 50.0% | |
TTGAAAGGGTTACTGCTCCC+AGG | + | chr3_1:82024135-82024154 | Msa0380350:intron | 50.0% | |
ACAAGGAACAGATGCTGGAC+CGG | + | chr3_1:82024183-82024202 | Msa0380350:CDS | 50.0% | |
CAACCCCACGATACTTGGAA+TGG | - | chr3_1:82025010-82025029 | None:intergenic | 50.0% | |
! | CATTCCAAGTATCGTGGGGT+TGG | + | chr3_1:82025008-82025027 | Msa0380350:CDS | 50.0% |
CTATCCAACCCCACGATACT+TGG | - | chr3_1:82025015-82025034 | None:intergenic | 50.0% | |
TCTGTTAGTCGTGACTCGTG+AGG | + | chr3_1:82025104-82025123 | Msa0380350:intron | 50.0% | |
CATACAGGCAATACCCCAAG+TGG | - | chr3_1:82025216-82025235 | None:intergenic | 50.0% | |
GGTATGACTGCATGTCTGTG+AGG | + | chr3_1:82025665-82025684 | Msa0380350:intron | 50.0% | |
TGCATGTCTGTGAGGAACCT+TGG | + | chr3_1:82025673-82025692 | Msa0380350:intron | 50.0% | |
TGAGGAACCTTGGTCCTTGT+AGG | + | chr3_1:82025683-82025702 | Msa0380350:intron | 50.0% | |
GCAAAACATGGACCATGCAC+AGG | + | chr3_1:82025874-82025893 | Msa0380350:intron | 50.0% | |
ACCACTGCCTGAAAGACCTA+TGG | + | chr3_1:82026305-82026324 | Msa0380350:intron | 50.0% | |
TCCATAGGTCTTTCAGGCAG+TGG | - | chr3_1:82026309-82026328 | None:intergenic | 50.0% | |
!! | CTGATAGCGGGTAAAAGGTC+AGG | - | chr3_1:82026352-82026371 | None:intergenic | 50.0% |
! | CTGACCTTTTACCCGCTATC+AGG | + | chr3_1:82026350-82026369 | Msa0380350:intron | 50.0% |
! | GACCTTTTACCCGCTATCAG+GGG | + | chr3_1:82026352-82026371 | Msa0380350:intron | 50.0% |
CTTTGTACCCTCCTTTCTGC+TGG | + | chr3_1:82026748-82026767 | Msa0380350:intron | 50.0% | |
TCAGAGTCCAGCAGAAAGGA+GGG | - | chr3_1:82026758-82026777 | None:intergenic | 50.0% | |
TTCAGAGTCCAGCAGAAAGG+AGG | - | chr3_1:82026759-82026778 | None:intergenic | 50.0% | |
TTACGATCGAACCCTGTGTG+AGG | + | chr3_1:82026805-82026824 | Msa0380350:intron | 50.0% | |
TACGATCGAACCCTGTGTGA+GGG | + | chr3_1:82026806-82026825 | Msa0380350:intron | 50.0% | |
TTGGGTCTAACCCTCACACA+GGG | - | chr3_1:82026819-82026838 | None:intergenic | 50.0% | |
TTTGGGTCTAACCCTCACAC+AGG | - | chr3_1:82026820-82026839 | None:intergenic | 50.0% | |
CAGAGTGATGCACCGTTAGA+GGG | - | chr3_1:82026934-82026953 | None:intergenic | 50.0% | |
ACAGAGTGATGCACCGTTAG+AGG | - | chr3_1:82026935-82026954 | None:intergenic | 50.0% | |
TAACGGTGCATCACTCTGTC+AGG | + | chr3_1:82026936-82026955 | Msa0380350:intron | 50.0% | |
AACGGTGCATCACTCTGTCA+GGG | + | chr3_1:82026937-82026956 | Msa0380350:intron | 50.0% | |
!! | AAAGGAAGTATCAGGGCCGA+GGG | - | chr3_1:82027020-82027039 | None:intergenic | 50.0% |
!! | TAAAGGAAGTATCAGGGCCG+AGG | - | chr3_1:82027021-82027040 | None:intergenic | 50.0% |
TGAAGCAGACAAGTTGCTGG+AGG | - | chr3_1:82027080-82027099 | None:intergenic | 50.0% | |
! | ATTGAGGGTGCGTTTGTTCC+CGG | - | chr3_1:82027203-82027222 | None:intergenic | 50.0% |
! | GCTGCATTGGTAGCTTAAGC+TGG | + | chr3_1:82027268-82027287 | Msa0380350:intron | 50.0% |
ACTGTTGCATAGTGCCCTTG+TGG | - | chr3_1:82027378-82027397 | None:intergenic | 50.0% | |
TGGAAACCTTACTCGGTTCC+TGG | + | chr3_1:82027613-82027632 | Msa0380350:intron | 50.0% | |
GGTAAGGGAAGGATCACTGA+TGG | - | chr3_1:82027680-82027699 | None:intergenic | 50.0% | |
GCTGCAACAACAGGATGGTA+AGG | - | chr3_1:82027696-82027715 | None:intergenic | 50.0% | |
! | GGGTTTTCAGCTGCAACAAC+AGG | - | chr3_1:82027705-82027724 | None:intergenic | 50.0% |
GAGAGAGATGAGGGTGACAA+AGG | - | chr3_1:82027741-82027760 | None:intergenic | 50.0% | |
GAGAGAGAGAGAGAGAGATG+AGG | - | chr3_1:82027751-82027770 | None:intergenic | 50.0% | |
CCTTGTCTCCTAGCAGTTTG+TGG | - | chr3_1:82028253-82028272 | None:intergenic | 50.0% | |
CCACAAACTGCTAGGAGACA+AGG | + | chr3_1:82028250-82028269 | Msa0380350:intron | 50.0% | |
ATAGAGTAAGGGAGAGCAGG+TGG | - | chr3_1:82028325-82028344 | None:intergenic | 50.0% | |
AGGTGCAGGCTCGATAGAAA+TGG | - | chr3_1:82028376-82028395 | None:intergenic | 50.0% | |
CTTCAGGTCAGCATGCTGAA+AGG | - | chr3_1:82028448-82028467 | None:intergenic | 50.0% | |
! | CATGCTGACCTGAAGAGCAT+GGG | + | chr3_1:82028453-82028472 | Msa0380350:intron | 50.0% |
! | ATGCTGACCTGAAGAGCATG+GGG | + | chr3_1:82028454-82028473 | Msa0380350:intron | 50.0% |
! | GCACGGCAAATCAAAGCATC+TGG | - | chr3_1:82028737-82028756 | None:intergenic | 50.0% |
! | CTGTACAACGAGTTGGAGCA+CGG | + | chr3_1:82028996-82029015 | Msa0380350:three_prime_UTR | 50.0% |
TGCGATTGACAAAGGCGGTG+TGG | - | chr3_1:82019734-82019753 | None:intergenic | 55.0% | |
GACGCTGCGATTGACAAAGG+CGG | - | chr3_1:82019739-82019758 | None:intergenic | 55.0% | |
GCCCCTCTTCCAATTCTCTC+TGG | + | chr3_1:82020302-82020321 | Msa0380350:CDS | 55.0% | |
ATGCAATCGGGAGGCTGAGT+AGG | - | chr3_1:82020403-82020422 | None:intergenic | 55.0% | |
GAGGGAACAACAAGCTGCCA+AGG | + | chr3_1:82020663-82020682 | Msa0380350:CDS | 55.0% | |
ATATCACCCTTGCCCCCTCA+AGG | + | chr3_1:82020745-82020764 | Msa0380350:CDS | 55.0% | |
CTACTACCTTGAGGGGGCAA+GGG | - | chr3_1:82020754-82020773 | None:intergenic | 55.0% | |
ACTACTACCTTGAGGGGGCA+AGG | - | chr3_1:82020755-82020774 | None:intergenic | 55.0% | |
GGCTTCCGTACTTGGAGTTG+AGG | - | chr3_1:82021307-82021326 | None:intergenic | 55.0% | |
CAACTCCAAGTACGGAAGCC+GGG | + | chr3_1:82021307-82021326 | Msa0380350:CDS | 55.0% | |
AGCTACTGCTGGCAACAGCT+AGG | - | chr3_1:82021827-82021846 | None:intergenic | 55.0% | |
!! | GAGGTGCCAGTTTTACCCTG+TGG | + | chr3_1:82023138-82023157 | Msa0380350:intron | 55.0% |
CATGGTCAAGGTCCTGAGTC+AGG | + | chr3_1:82023569-82023588 | Msa0380350:intron | 55.0% | |
!! | CCTTTGAGATTGGGGGCATC+TGG | - | chr3_1:82024062-82024081 | None:intergenic | 55.0% |
CCAGATGCCCCCAATCTCAA+AGG | + | chr3_1:82024059-82024078 | Msa0380350:CDS | 55.0% | |
AAAGGGTTACTGCTCCCAGG+AGG | + | chr3_1:82024138-82024157 | Msa0380350:intron | 55.0% | |
TCGGGTCCCAAGTCTATCAC+AGG | - | chr3_1:82024866-82024885 | None:intergenic | 55.0% | |
TGATTGTGAGAGGCGACGTG+TGG | + | chr3_1:82025037-82025056 | Msa0380350:CDS | 55.0% | |
TGAGAGGCGACGTGTGGTTT+GGG | + | chr3_1:82025043-82025062 | Msa0380350:CDS | 55.0% | |
AACGGGAGAGTGGGCATATG+AGG | - | chr3_1:82025334-82025353 | None:intergenic | 55.0% | |
! | GCCTGCATTATGAGGGTGTG+AGG | + | chr3_1:82025609-82025628 | Msa0380350:intron | 55.0% |
GCCTCACACCCTCATAATGC+AGG | - | chr3_1:82025613-82025632 | None:intergenic | 55.0% | |
!! | TGCCCCTGATAGCGGGTAAA+AGG | - | chr3_1:82026357-82026376 | None:intergenic | 55.0% |
TAGTCACGTGCCCCTGATAG+CGG | - | chr3_1:82026365-82026384 | None:intergenic | 55.0% | |
ACTCCCGGTTGGAGAACCAT+TGG | - | chr3_1:82026701-82026720 | None:intergenic | 55.0% | |
! | GAGCATGGCATGAGAGCATG+AGG | - | chr3_1:82026878-82026897 | None:intergenic | 55.0% |
ACGGTGCATCACTCTGTCAG+GGG | + | chr3_1:82026938-82026957 | Msa0380350:intron | 55.0% | |
TGCATCACTCTGTCAGGGGT+AGG | + | chr3_1:82026942-82026961 | Msa0380350:intron | 55.0% | |
GGGAAGGATCACTGATGGCT+TGG | - | chr3_1:82027675-82027694 | None:intergenic | 55.0% | |
GTTGGTTAGTACACGTGCGG+TGG | - | chr3_1:82027951-82027970 | None:intergenic | 55.0% | |
!! | GGATGCTTTGGGGAAGACGA+CGG | - | chr3_1:82028025-82028044 | None:intergenic | 55.0% |
GAAGACATCAAGCTGCTGCC+AGG | + | chr3_1:82028055-82028074 | Msa0380350:intron | 55.0% | |
AAGGGAGAGCAGGTGGCATT+CGG | - | chr3_1:82028318-82028337 | None:intergenic | 55.0% | |
GCATGCTGACCTGAAGAGCA+TGG | + | chr3_1:82028452-82028471 | Msa0380350:intron | 55.0% | |
GGCGGCGTGATCAGAGAAAG+AGG | - | chr3_1:82019699-82019718 | None:intergenic | 60.0% | |
GGGGACGCTGCGATTGACAA+AGG | - | chr3_1:82019742-82019761 | None:intergenic | 60.0% | |
TGGAACCCGGCTTCCGTACT+TGG | - | chr3_1:82021315-82021334 | None:intergenic | 60.0% | |
AGATGCTGGACCGGCAGTAC+AGG | + | chr3_1:82024192-82024211 | Msa0380350:CDS | 60.0% | |
GTGAGAGGCGACGTGTGGTT+TGG | + | chr3_1:82025042-82025061 | Msa0380350:CDS | 60.0% | |
GAGAGGCGACGTGTGGTTTG+GGG | + | chr3_1:82025044-82025063 | Msa0380350:CDS | 60.0% | |
AGTCACGTGCCCCTGATAGC+GGG | - | chr3_1:82026364-82026383 | None:intergenic | 60.0% | |
AGTATCAGGGCCGAGGGAGA+TGG | - | chr3_1:82027014-82027033 | None:intergenic | 60.0% | |
!! | TGCTTTGGGGAAGACGACGG+TGG | - | chr3_1:82028022-82028041 | None:intergenic | 60.0% |
GTGTGGACGGAGGTTGACGG+CGG | - | chr3_1:82019717-82019736 | None:intergenic | 65.0% | |
GCGGTGTGGACGGAGGTTGA+CGG | - | chr3_1:82019720-82019739 | None:intergenic | 65.0% | |
GACAAAGGCGGTGTGGACGG+AGG | - | chr3_1:82019727-82019746 | None:intergenic | 65.0% | |
AGGGCCGAGGGAGATGGCTT+TGG | - | chr3_1:82027008-82027027 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 82019575 | 82029176 | 82019575 | ID=Msa0380350;Name=Msa0380350 |
chr3_1 | mRNA | 82019575 | 82029176 | 82019575 | ID=Msa0380350-mRNA-1;Parent=Msa0380350;Name=Msa0380350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=363|1|1|1|0.94|0.95|20|491|631 |
chr3_1 | exon | 82019575 | 82019905 | 82019575 | ID=Msa0380350-mRNA-1:exon:20876;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82019999 | 82020766 | 82019999 | ID=Msa0380350-mRNA-1:exon:20877;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82020852 | 82020942 | 82020852 | ID=Msa0380350-mRNA-1:exon:20878;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82021035 | 82021095 | 82021035 | ID=Msa0380350-mRNA-1:exon:20879;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82021302 | 82021379 | 82021302 | ID=Msa0380350-mRNA-1:exon:20880;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82021476 | 82021526 | 82021476 | ID=Msa0380350-mRNA-1:exon:20881;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82021613 | 82021665 | 82021613 | ID=Msa0380350-mRNA-1:exon:20882;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82022408 | 82022480 | 82022408 | ID=Msa0380350-mRNA-1:exon:20883;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82022680 | 82022737 | 82022680 | ID=Msa0380350-mRNA-1:exon:20884;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82022852 | 82022898 | 82022852 | ID=Msa0380350-mRNA-1:exon:20885;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82023002 | 82023052 | 82023002 | ID=Msa0380350-mRNA-1:exon:20886;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82023696 | 82023728 | 82023696 | ID=Msa0380350-mRNA-1:exon:20887;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82023885 | 82023922 | 82023885 | ID=Msa0380350-mRNA-1:exon:20888;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82024005 | 82024080 | 82024005 | ID=Msa0380350-mRNA-1:exon:20889;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82024157 | 82024213 | 82024157 | ID=Msa0380350-mRNA-1:exon:20890;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82024619 | 82024702 | 82024619 | ID=Msa0380350-mRNA-1:exon:20891;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82024797 | 82024895 | 82024797 | ID=Msa0380350-mRNA-1:exon:20892;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82024979 | 82025083 | 82024979 | ID=Msa0380350-mRNA-1:exon:20893;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82026372 | 82026443 | 82026372 | ID=Msa0380350-mRNA-1:exon:20894;Parent=Msa0380350-mRNA-1 |
chr3_1 | exon | 82028653 | 82029176 | 82028653 | ID=Msa0380350-mRNA-1:exon:20895;Parent=Msa0380350-mRNA-1 |
chr3_1 | five_prime_UTR | 82019575 | 82019905 | 82019575 | ID=Msa0380350-mRNA-1:five_prime_utr;Parent=Msa0380350-mRNA-1 |
chr3_1 | five_prime_UTR | 82019999 | 82020030 | 82019999 | ID=Msa0380350-mRNA-1:five_prime_utr;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82020031 | 82020766 | 82020031 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82020852 | 82020942 | 82020852 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82021035 | 82021095 | 82021035 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82021302 | 82021379 | 82021302 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82021476 | 82021526 | 82021476 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82021613 | 82021665 | 82021613 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82022408 | 82022480 | 82022408 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82022680 | 82022737 | 82022680 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82022852 | 82022898 | 82022852 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82023002 | 82023052 | 82023002 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82023696 | 82023728 | 82023696 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82023885 | 82023922 | 82023885 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82024005 | 82024080 | 82024005 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82024157 | 82024213 | 82024157 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82024619 | 82024702 | 82024619 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82024797 | 82024895 | 82024797 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82024979 | 82025083 | 82024979 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82026372 | 82026443 | 82026372 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | CDS | 82028653 | 82028685 | 82028653 | ID=Msa0380350-mRNA-1:cds;Parent=Msa0380350-mRNA-1 |
chr3_1 | three_prime_UTR | 82028686 | 82029176 | 82028686 | ID=Msa0380350-mRNA-1:three_prime_utr;Parent=Msa0380350-mRNA-1 |
Gene Sequence |
Protein sequence |