Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1376600 | XP_003604073.1 | 96.693 | 635 | 14 | 4 | 1 | 631 | 1 | 632 | 0.0 | 1245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1376600 | sp|Q9SDX3|UGPA_MUSAC | 48.673 | 452 | 212 | 5 | 195 | 629 | 19 | 467 | 8.43e-135 | 405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1376600 | G7J8L5 | 96.693 | 635 | 14 | 4 | 1 | 631 | 1 | 632 | 0.0 | 1245 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001500 | Msa1376600 | 0.850403 | 1.736941e-60 | -8.615850e-47 |
| Msa0367980 | Msa1376600 | 0.804073 | 2.573408e-49 | -8.615850e-47 |
| Msa0380350 | Msa1376600 | 0.889286 | 2.774527e-73 | -8.615850e-47 |
| Msa0532790 | Msa1376600 | 0.807034 | 6.157032e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1376600 | MtrunA17_Chr3g0145841 | 96.693 | 635 | 14 | 4 | 1 | 631 | 1 | 632 | 0.0 | 1245 |
| Msa1376600 | MtrunA17_Chr5g0433871 | 50.000 | 430 | 197 | 4 | 217 | 629 | 42 | 470 | 1.41e-121 | 369 |
| Msa1376600 | MtrunA17_Chr3g0109761 | 48.338 | 331 | 157 | 3 | 312 | 629 | 2 | 331 | 7.66e-101 | 310 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1376600 | AT3G03250.1 | 49.767 | 430 | 198 | 4 | 217 | 629 | 41 | 469 | 7.55e-125 | 377 |
| Msa1376600 | AT3G03250.2 | 49.764 | 424 | 195 | 4 | 217 | 623 | 41 | 463 | 1.04e-123 | 375 |
| Msa1376600 | AT3G03250.3 | 50.000 | 422 | 193 | 4 | 217 | 621 | 41 | 461 | 1.80e-123 | 374 |
| Msa1376600 | AT5G17310.2 | 46.903 | 452 | 220 | 5 | 195 | 629 | 22 | 470 | 3.09e-120 | 365 |
| Msa1376600 | AT5G17310.5 | 49.596 | 371 | 170 | 3 | 276 | 629 | 20 | 390 | 3.71e-115 | 350 |
| Msa1376600 | AT5G17310.1 | 49.596 | 371 | 170 | 3 | 276 | 629 | 20 | 390 | 3.71e-115 | 350 |
| Msa1376600 | AT5G17310.3 | 49.730 | 370 | 169 | 3 | 277 | 629 | 16 | 385 | 9.97e-115 | 348 |
| Msa1376600 | AT5G17310.6 | 49.254 | 335 | 153 | 3 | 312 | 629 | 2 | 336 | 2.45e-100 | 309 |
| Msa1376600 | AT5G17310.4 | 49.254 | 335 | 153 | 3 | 312 | 629 | 2 | 336 | 2.45e-100 | 309 |
| Msa1376600 | AT3G03600.1 | 62.000 | 200 | 73 | 1 | 1 | 197 | 1 | 200 | 2.16e-84 | 264 |
Find 181 sgRNAs with CRISPR-Local
Find 642 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCCTCCGGAACAAATA+TGG | 0.222520 | tig0019825:-102657 | Msa1376600:CDS |
| TGCAAAACCGGGCTTGAAAT+TGG | 0.242884 | tig0019825:-97147 | Msa1376600:CDS |
| CCAGTATAGTAAGTATTCTT+TGG | 0.255537 | tig0019825:+103677 | None:intergenic |
| TGAACAAACTAAGAATCTTT+TGG | 0.267833 | tig0019825:-102705 | Msa1376600:CDS |
| CACTCATGATAGTACTTTAA+AGG | 0.273991 | tig0019825:-102203 | Msa1376600:intron |
| CTTTGAGCTTATGTCCAAAA+AGG | 0.277828 | tig0019825:-103294 | Msa1376600:CDS |
| TATAATACCTCCAATTAAAT+AGG | 0.279423 | tig0019825:+94522 | None:intergenic |
| TGGAGTTGTGATTGAGAATA+AGG | 0.300476 | tig0019825:-97114 | Msa1376600:intron |
| CGTGACTATTGTTGCAAAAC+CGG | 0.304515 | tig0019825:-97159 | Msa1376600:CDS |
| TGAGAGGCGACGTGTGGTTT+GGG | 0.308284 | tig0019825:-98493 | Msa1376600:CDS |
| TTAATTGGAGGTATTATATT+CGG | 0.319117 | tig0019825:-94517 | Msa1376600:three_prime_UTR |
| AAGAAACAAATAACAAGTTT+TGG | 0.320342 | tig0019825:-94741 | Msa1376600:three_prime_UTR |
| GTTGCGAGATCGAAACTTCT+TGG | 0.325917 | tig0019825:+103202 | None:intergenic |
| TAGACGCTAAATGAACTAAA+TGG | 0.326381 | tig0019825:+104254 | None:intergenic |
| ATTGGTGAACCATTCATTCT+TGG | 0.328350 | tig0019825:+94882 | None:intergenic |
| CAATTATTTCATCACTGTTA+TGG | 0.332739 | tig0019825:+94713 | None:intergenic |
| GGAGAAGGAGAAGAGTAATT+TGG | 0.337508 | tig0019825:-102877 | Msa1376600:CDS |
| TACGATCTGTTATGCTTTGA+AGG | 0.338892 | tig0019825:-103708 | Msa1376600:five_prime_UTR |
| AAGCAATGCGGCTGAAAGTA+TGG | 0.339549 | tig0019825:+103042 | None:intergenic |
| AATTGAACAGAGGGGTTAAC+AGG | 0.340725 | tig0019825:+103011 | None:intergenic |
| CTATCCAACCCCACGATACT+TGG | 0.342114 | tig0019825:+98524 | None:intergenic |
| TATTTGTTTCTTCAACCTTT+CGG | 0.343324 | tig0019825:+94752 | None:intergenic |
| ATGTTCCATTCTCAGATTGC+TGG | 0.348622 | tig0019825:-98572 | Msa1376600:intron |
| CATACAAATCAAAGTCTTAT+CGG | 0.349904 | tig0019825:+103403 | None:intergenic |
| AGGAATTGTACCTTTGAGAT+TGG | 0.363802 | tig0019825:+99468 | None:intergenic |
| GGAATTGTACCTTTGAGATT+GGG | 0.368076 | tig0019825:+99469 | None:intergenic |
| TTGAAAACCCATATTTGTTC+CGG | 0.368093 | tig0019825:+102649 | None:intergenic |
| TGGAACCCGGCTTCCGTACT+TGG | 0.371009 | tig0019825:+102249 | None:intergenic |
| CAAGGGAACAAAACGAGATT+CGG | 0.372900 | tig0019825:+98886 | None:intergenic |
| GGTATTTGTTTCTAATGAAT+AGG | 0.379270 | tig0019825:-94852 | Msa1376600:three_prime_UTR |
| AAAGACTTACATCTTTATCT+TGG | 0.380478 | tig0019825:+99821 | None:intergenic |
| TTCTCAATCACAACTCCATC+TGG | 0.381348 | tig0019825:+97119 | None:intergenic |
| AAATGCACCTTAAAATTCAT+TGG | 0.382777 | tig0019825:+100499 | None:intergenic |
| TTGCGAGATCGAAACTTCTT+GGG | 0.402017 | tig0019825:+103203 | None:intergenic |
| CTTCTCGAGAAGCAGTGTTT+TGG | 0.409136 | tig0019825:+102962 | None:intergenic |
| GTGAGAGGCGACGTGTGGTT+TGG | 0.410735 | tig0019825:-98494 | Msa1376600:CDS |
| CCAAAGAATACTTACTATAC+TGG | 0.411067 | tig0019825:-103677 | Msa1376600:intron |
| TCCAATTCTCTCTGGCGTAC+TGG | 0.414072 | tig0019825:-103251 | Msa1376600:CDS |
| CATTTCAAAGATTACACTTA+CGG | 0.415466 | tig0019825:-103455 | Msa1376600:CDS |
| ACCAGTACGCCAGAGAGAAT+TGG | 0.424267 | tig0019825:+103250 | None:intergenic |
| TCTTCCCTTGCTCGTCATAA+TGG | 0.433968 | tig0019825:-103359 | Msa1376600:CDS |
| ATATTCCGTTCACTAATGAT+AGG | 0.443745 | tig0019825:-101107 | Msa1376600:CDS |
| TGGGGCAAATATTACTTTGA+AGG | 0.448244 | tig0019825:-98474 | Msa1376600:intron |
| ATCGACAATGACGATGCAAT+CGG | 0.448666 | tig0019825:+103148 | None:intergenic |
| GCTTCCGTACTTGGAGTTGA+GGG | 0.453661 | tig0019825:+102258 | None:intergenic |
| TTTAAAGCGTCGGTTCTAGC+TGG | 0.455824 | tig0019825:+98697 | None:intergenic |
| TAATTTAAAATCTCAACTGT+TGG | 0.460381 | tig0019825:+104204 | None:intergenic |
| CATGCCTCCGGAACAAATAT+GGG | 0.463448 | tig0019825:-102656 | Msa1376600:CDS |
| GTGGTGTACTACTACCTTGA+GGG | 0.464198 | tig0019825:+102802 | None:intergenic |
| TGAGTTTAAGAACCATTAAG+AGG | 0.464580 | tig0019825:-99527 | Msa1376600:CDS |
| GAATCGACAAGAGCGACAAT+TGG | 0.465763 | tig0019825:+103077 | None:intergenic |
| AGTAATTTGGCAGCTAAGCT+TGG | 0.466826 | tig0019825:-102864 | Msa1376600:CDS |
| GCACGGCAAATCAAAGCATC+TGG | 0.470494 | tig0019825:+94824 | None:intergenic |
| CGCAACAAGAAACTCTGCTT+CGG | 0.474889 | tig0019825:-103185 | Msa1376600:CDS |
| ATCAGATTTACTGCTTCTGC+AGG | 0.475211 | tig0019825:-98855 | Msa1376600:intron |
| ATAAATGTCTGACCTCAATC+TGG | 0.475272 | tig0019825:+102475 | None:intergenic |
| ACGACGCAAGCTGAAATAAG+AGG | 0.476193 | tig0019825:+103795 | None:intergenic |
| CCTGGATTTATTATTGTCAC+AGG | 0.477736 | tig0019825:-101078 | Msa1376600:intron |
| CTTCTTGGGACTGTTGCTGT+TGG | 0.480287 | tig0019825:+103217 | None:intergenic |
| AACAGAGGGGTTAACAGGAA+TGG | 0.486093 | tig0019825:+103016 | None:intergenic |
| ATTACTCTTCTCCTTCTCCT+TGG | 0.487507 | tig0019825:+102881 | None:intergenic |
| CCATCTGATAATGTTAGCTC+TGG | 0.488544 | tig0019825:+101939 | None:intergenic |
| TTGAAGCTCAATCATGCCTC+CGG | 0.491024 | tig0019825:-102668 | Msa1376600:CDS |
| GCCCCTCTTCCAATTCTCTC+TGG | 0.493204 | tig0019825:-103259 | Msa1376600:CDS |
| CCTGTGACAATAATAAATCC+AGG | 0.494692 | tig0019825:+101078 | None:intergenic |
| ACAGAGGGGTTAACAGGAAT+GGG | 0.495983 | tig0019825:+103017 | None:intergenic |
| AGATGCTGGACCGGCAGTAC+AGG | 0.497972 | tig0019825:-99345 | Msa1376600:intron |
| CAGTTCTTTGATAATGCGAT+TGG | 0.498035 | tig0019825:-98920 | Msa1376600:CDS |
| GTGACTATTGTTGCAAAACC+GGG | 0.498486 | tig0019825:-97158 | Msa1376600:CDS |
| AAAAGTGCGCACATCAATGC+TGG | 0.499284 | tig0019825:+102063 | None:intergenic |
| TCAACTCCAAGTACGGAAGC+CGG | 0.499412 | tig0019825:-102255 | Msa1376600:CDS |
| TCGACAATGACGATGCAATC+GGG | 0.500294 | tig0019825:+103149 | None:intergenic |
| TGCAGATATCCAAGAATGAA+TGG | 0.501034 | tig0019825:-94891 | Msa1376600:exon |
| GGCTTCCGTACTTGGAGTTG+AGG | 0.502670 | tig0019825:+102257 | None:intergenic |
| AATGAAAATACCTGTACTGC+CGG | 0.504944 | tig0019825:+99335 | None:intergenic |
| GAAGAGACTATGTAGTATCA+AGG | 0.506119 | tig0019825:+94594 | None:intergenic |
| CGCCAGAGAGAATTGGAAGA+GGG | 0.506319 | tig0019825:+103257 | None:intergenic |
| AGATTGCTGGCTTTCGAAGT+CGG | 0.507646 | tig0019825:-98559 | Msa1376600:CDS |
| CTTGATCATTAACCAGATTG+AGG | 0.508702 | tig0019825:-102487 | Msa1376600:intron |
| AGATAGACAAATTGAACAGA+GGG | 0.508931 | tig0019825:+103002 | None:intergenic |
| TAAATCTGATGTTGCATCCA+AGG | 0.511158 | tig0019825:+98868 | None:intergenic |
| CTTCTACAAGGAACAGATGC+TGG | 0.513459 | tig0019825:-99359 | Msa1376600:CDS |
| CAAGGGTGATATAGCATCGT+AGG | 0.516295 | tig0019825:+102827 | None:intergenic |
| GAATGGTTCACCAATGTTGA+GGG | 0.517544 | tig0019825:-94874 | Msa1376600:three_prime_UTR |
| CATTCCAAGTATCGTGGGGT+TGG | 0.522731 | tig0019825:-98528 | Msa1376600:CDS |
| CAACTCCAAGTACGGAAGCC+GGG | 0.523495 | tig0019825:-102254 | Msa1376600:CDS |
| AATGATGAGTGGCGACTTGA+CGG | 0.524133 | tig0019825:+103474 | None:intergenic |
| GGAATTTCCAATTTCAAGCC+CGG | 0.527588 | tig0019825:+97140 | None:intergenic |
| TCATAATCTAAGTAGGGTAA+AGG | 0.529652 | tig0019825:-101963 | Msa1376600:intron |
| TTGTTTACTGTACAACGAGT+TGG | 0.529919 | tig0019825:-94569 | Msa1376600:three_prime_UTR |
| GCAACAGTGGTCACGCATAG+AGG | 0.532431 | tig0019825:+103888 | None:intergenic |
| AAGGGAACAAAACGAGATTC+GGG | 0.535779 | tig0019825:+98887 | None:intergenic |
| GACTTATTGTTATATACCGA+CGG | 0.537556 | tig0019825:-94490 | Msa1376600:three_prime_UTR |
| ACAAGGAACAGATGCTGGAC+CGG | 0.539255 | tig0019825:-99354 | Msa1376600:CDS |
| GCGGTGTGGACGGAGGTTGA+CGG | 0.541750 | tig0019825:+103845 | None:intergenic |
| AATTCTCTCTGGCGTACTGG+TGG | 0.544639 | tig0019825:-103248 | Msa1376600:CDS |
| TTGGATAGTTTGATTGTGAG+AGG | 0.544817 | tig0019825:-98509 | Msa1376600:CDS |
| ATGCAATCGGGAGGCTGAGT+AGG | 0.546108 | tig0019825:+103161 | None:intergenic |
| CTTGGGACCCGAATATGAAA+AGG | 0.546232 | tig0019825:-98662 | Msa1376600:intron |
| TTAAATCCTGTGATAGACTT+GGG | 0.546969 | tig0019825:-98679 | Msa1376600:CDS |
| ATTGACAAAGGCGGTGTGGA+CGG | 0.548471 | tig0019825:+103835 | None:intergenic |
| TTTAAATCCTGTGATAGACT+TGG | 0.550417 | tig0019825:-98680 | Msa1376600:CDS |
| AACTTCTTGACGATCATCTG+AGG | 0.551175 | tig0019825:-102917 | Msa1376600:CDS |
| AAATCCATTCCAAGTATCGT+GGG | 0.551935 | tig0019825:-98533 | Msa1376600:CDS |
| GATTTCATCAAAGAGAGGAT+TGG | 0.553663 | tig0019825:+103316 | None:intergenic |
| TAGACCCTCAACTCCAAGTA+CGG | 0.557315 | tig0019825:-102262 | Msa1376600:CDS |
| GCTTTCATGTAGATCTGCAA+TGG | 0.567678 | tig0019825:-102538 | Msa1376600:intron |
| CAAGCTGAAATAAGAGGGAG+AGG | 0.571066 | tig0019825:+103801 | None:intergenic |
| AAATCTGATGTTGCATCCAA+GGG | 0.571120 | tig0019825:+98869 | None:intergenic |
| ACAACAAGCTGCCAAGGAGA+AGG | 0.571501 | tig0019825:-102892 | Msa1376600:CDS |
| TTAAGATCACATTAGACGAA+TGG | 0.572268 | tig0019825:+100524 | None:intergenic |
| GGCGGCGTGATCAGAGAAAG+AGG | 0.573818 | tig0019825:+103866 | None:intergenic |
| AAGGGTGATATAGCATCGTA+GGG | 0.575204 | tig0019825:+102828 | None:intergenic |
| CAACCCCACGATACTTGGAA+TGG | 0.575731 | tig0019825:+98529 | None:intergenic |
| GAGAGGCGACGTGTGGTTTG+GGG | 0.576021 | tig0019825:-98492 | Msa1376600:CDS |
| GAATTGTACCTTTGAGATTG+GGG | 0.576929 | tig0019825:+99470 | None:intergenic |
| GAGGGAACAACAAGCTGCCA+AGG | 0.577303 | tig0019825:-102898 | Msa1376600:CDS |
| TGGTGTACTACTACCTTGAG+GGG | 0.580656 | tig0019825:+102803 | None:intergenic |
| TCGGGTCCCAAGTCTATCAC+AGG | 0.582833 | tig0019825:+98673 | None:intergenic |
| ATCAGATGGACATAGCAGTA+AGG | 0.585945 | tig0019825:-101925 | Msa1376600:CDS |
| TCAAAGATTTCATCAAAGAG+AGG | 0.587278 | tig0019825:+103311 | None:intergenic |
| AACAAAACGAGATTCGGGTA+TGG | 0.588682 | tig0019825:+98892 | None:intergenic |
| TGATTGCCATTCTGTTGCGA+AGG | 0.589249 | tig0019825:+103432 | None:intergenic |
| CAAATCCATTCCAAGTATCG+TGG | 0.589695 | tig0019825:-98534 | Msa1376600:CDS |
| ACGCCAGAGAGAATTGGAAG+AGG | 0.589838 | tig0019825:+103256 | None:intergenic |
| GATCTATACACTTCTAGAGA+AGG | 0.590819 | tig0019825:-98736 | Msa1376600:CDS |
| TCTCTTTACTGGGAACCGAA+AGG | 0.591193 | tig0019825:-94767 | Msa1376600:three_prime_UTR |
| TAAAGAGAAAAGCTAACTGA+TGG | 0.593367 | tig0019825:+94782 | None:intergenic |
| CTGTACAACGAGTTGGAGCA+CGG | 0.594044 | tig0019825:-94562 | Msa1376600:three_prime_UTR |
| AGCGACCATTATGACGAGCA+AGG | 0.595760 | tig0019825:+103354 | None:intergenic |
| ACTAATGATAGGTGGAACCC+TGG | 0.596499 | tig0019825:-101096 | Msa1376600:CDS |
| TGAATGGTTCACCAATGTTG+AGG | 0.596690 | tig0019825:-94875 | Msa1376600:three_prime_UTR |
| AAAACCCATATTTGTTCCGG+AGG | 0.599710 | tig0019825:+102652 | None:intergenic |
| AGCTGAAATAAGAGGGAGAG+GGG | 0.600257 | tig0019825:+103803 | None:intergenic |
| ATCACATTAGACGAATGGCT+TGG | 0.601415 | tig0019825:+100529 | None:intergenic |
| TTACGGCCTTCGCAACAGAA+TGG | 0.602114 | tig0019825:-103438 | Msa1376600:CDS |
| AGCTTTGTAACTGTATTGCA+CGG | 0.602625 | tig0019825:+94807 | None:intergenic |
| AAGCTGAAATAAGAGGGAGA+GGG | 0.602826 | tig0019825:+103802 | None:intergenic |
| GGGGACGCTGCGATTGACAA+AGG | 0.602848 | tig0019825:+103823 | None:intergenic |
| TTGAAATTGGAAATTCCAGA+TGG | 0.603296 | tig0019825:-97134 | Msa1376600:CDS |
| AAACAAATACCCCTCAACAT+TGG | 0.607929 | tig0019825:+94864 | None:intergenic |
| AAATGCTATTGATTATTGCA+TGG | 0.611246 | tig0019825:-100663 | Msa1376600:CDS |
| TTCCGTTCACTAATGATAGG+TGG | 0.611432 | tig0019825:-101104 | Msa1376600:CDS |
| GCGACCATTATGACGAGCAA+GGG | 0.613460 | tig0019825:+103355 | None:intergenic |
| CGACGCAAGCTGAAATAAGA+GGG | 0.618140 | tig0019825:+103796 | None:intergenic |
| CTGTGACAATAATAAATCCA+GGG | 0.621297 | tig0019825:+101079 | None:intergenic |
| CTTAGCACAAATGCACACAT+TGG | 0.623840 | tig0019825:-103497 | Msa1376600:CDS |
| GTAAGTATTCTTTGGAACAG+CGG | 0.624598 | tig0019825:+103685 | None:intergenic |
| AATTGTACCTTTGAGATTGG+GGG | 0.632312 | tig0019825:+99471 | None:intergenic |
| CAAGTCTTCTGTTATCGATG+AGG | 0.634448 | tig0019825:-103117 | Msa1376600:CDS |
| GACAAAGGCGGTGTGGACGG+AGG | 0.637372 | tig0019825:+103838 | None:intergenic |
| ACTTCTTGACGATCATCTGA+GGG | 0.639356 | tig0019825:-102916 | Msa1376600:CDS |
| TATGATCAAACTCTTCTACA+AGG | 0.640197 | tig0019825:-99371 | Msa1376600:CDS |
| GCGTCTAGATGCAAGACACA+TGG | 0.641665 | tig0019825:-104238 | Msa1376600:five_prime_UTR |
| TATCACAGGATTTAAAGCGT+CGG | 0.642268 | tig0019825:+98687 | None:intergenic |
| TTCCACCTATCATTAGTGAA+CGG | 0.643911 | tig0019825:+101102 | None:intergenic |
| CCAGAGCTAACATTATCAGA+TGG | 0.645741 | tig0019825:-101939 | Msa1376600:CDS |
| AGATGGACATAGCAGTAAGG+AGG | 0.647768 | tig0019825:-101922 | Msa1376600:CDS |
| ATCAGAGAAAGAGGCAACAG+TGG | 0.649288 | tig0019825:+103875 | None:intergenic |
| TCTGCAATGGATATTTGTGA+CGG | 0.651282 | tig0019825:-102525 | Msa1376600:CDS |
| AAGATAGACAAATTGAACAG+AGG | 0.659788 | tig0019825:+103001 | None:intergenic |
| TGATTGTGAGAGGCGACGTG+TGG | 0.661366 | tig0019825:-98499 | Msa1376600:CDS |
| GATCGTACTAACAACGACGA+TGG | 0.663141 | tig0019825:+103724 | None:intergenic |
| GTGTGGACGGAGGTTGACGG+CGG | 0.665065 | tig0019825:+103848 | None:intergenic |
| TGCTATTGATTATTGCATGG+AGG | 0.668962 | tig0019825:-100660 | Msa1376600:intron |
| GCCAGAGAGAATTGGAAGAG+GGG | 0.678738 | tig0019825:+103258 | None:intergenic |
| AATCCATTCCAAGTATCGTG+GGG | 0.679086 | tig0019825:-98532 | Msa1376600:CDS |
| TGCGATTGACAAAGGCGGTG+TGG | 0.679672 | tig0019825:+103831 | None:intergenic |
| AATGGTTCACCAATGTTGAG+GGG | 0.680466 | tig0019825:-94873 | Msa1376600:three_prime_UTR |
| TGTGATGAAGTGCGACAATG+TGG | 0.682299 | tig0019825:-100840 | Msa1376600:CDS |
| GCTGAAATAAGAGGGAGAGG+GGG | 0.689005 | tig0019825:+103804 | None:intergenic |
| GTAATCTTTGAAATGATGAG+TGG | 0.693605 | tig0019825:+103463 | None:intergenic |
| ATGCGGCTGAAAGTATGGAG+AGG | 0.695845 | tig0019825:+103047 | None:intergenic |
| ACAATGACGATGCAATCGGG+AGG | 0.701583 | tig0019825:+103152 | None:intergenic |
| GATAGACAAATTGAACAGAG+GGG | 0.719867 | tig0019825:+103003 | None:intergenic |
| GACGCTGCGATTGACAAAGG+CGG | 0.726332 | tig0019825:+103826 | None:intergenic |
| GTGATGAAGTGCGACAATGT+GGG | 0.730135 | tig0019825:-100839 | Msa1376600:CDS |
| TGCAGGCATACATTTGACGA+TGG | 0.733353 | tig0019825:-101134 | Msa1376600:intron |
| GGTGTACTACTACCTTGAGG+GGG | 0.743686 | tig0019825:+102804 | None:intergenic |
| CAGGAATGGGATAAGCAATG+CGG | 0.754863 | tig0019825:+103030 | None:intergenic |
| AGGGTGATATAGCATCGTAG+GGG | 0.760959 | tig0019825:+102829 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTATTGTAAATAGAAA+TGG | - | tig0019825:98510-98529 | Msa1376600:CDS | 10.0% |
| !! | AAAAATGTAATACAAATATA+TGG | + | tig0019825:98877-98896 | None:intergenic | 10.0% |
| !! | TATATATAATTCATTTGAAA+GGG | + | tig0019825:100065-100084 | None:intergenic | 10.0% |
| !! | ATATATATAATTCATTTGAA+AGG | + | tig0019825:100066-100085 | None:intergenic | 10.0% |
| !! | TTATTTATTAATAAAACTCT+GGG | - | tig0019825:103239-103258 | Msa1376600:CDS | 10.0% |
| !! | TAATACAATCAAATCAAATA+TGG | + | tig0019825:96504-96523 | None:intergenic | 15.0% |
| !!! | TAATATTTTGCTTTAAGTTA+TGG | + | tig0019825:97278-97297 | None:intergenic | 15.0% |
| !! | CTAAAATATTGTTTATTCAA+TGG | - | tig0019825:97884-97903 | Msa1376600:intron | 15.0% |
| !! | CTATTTACAATAATTTACAT+AGG | + | tig0019825:98507-98526 | None:intergenic | 15.0% |
| !!! | CTTAAATTTGTAATTTTCAT+TGG | - | tig0019825:98550-98569 | Msa1376600:CDS | 15.0% |
| !!! | CTTAAATTTGTAATTTTCAT+TGG | - | tig0019825:98550-98569 | Msa1376600:CDS | 15.0% |
| !! | TTATTGAAAATGAATTGAAA+GGG | - | tig0019825:99240-99259 | Msa1376600:intron | 15.0% |
| !!! | ATTAACTAGTCTTATATTTA+TGG | + | tig0019825:99461-99480 | None:intergenic | 15.0% |
| !!! | AACTATATTTTCGTATAAAT+GGG | - | tig0019825:101042-101061 | Msa1376600:intron | 15.0% |
| !!! | TTATATTCTTGTTTGTTTAT+TGG | - | tig0019825:101629-101648 | Msa1376600:intron | 15.0% |
| !!! | TATATTCTTGTTTGTTTATT+GGG | - | tig0019825:101630-101649 | Msa1376600:intron | 15.0% |
| !! | ATATATATATATCAAATGAG+AGG | - | tig0019825:102918-102937 | Msa1376600:CDS | 15.0% |
| !! | CTTATTTATTAATAAAACTC+TGG | - | tig0019825:103238-103257 | Msa1376600:CDS | 15.0% |
| !! | TTAAAACATACAACTAAATT+AGG | - | tig0019825:103443-103462 | Msa1376600:CDS | 15.0% |
| !!! | TTTTAGCTTTTAGATAAAAA+AGG | - | tig0019825:103995-104014 | Msa1376600:intron | 15.0% |
| !!! | ATTTTTTCATCCTATTTAAT+TGG | - | tig0019825:104124-104143 | Msa1376600:intron | 15.0% |
| !!! | TAATTTAAAATCTCAACTGT+TGG | + | tig0019825:94455-94474 | None:intergenic | 20.0% |
| !! | TTATACTTACATAACAGTTA+TGG | - | tig0019825:96200-96219 | Msa1376600:intron | 20.0% |
| !!! | TTGTAAAAATATTTTGCAAC+AGG | + | tig0019825:96253-96272 | None:intergenic | 20.0% |
| !! | AAAACTAAAAAATCAGTCAA+TGG | + | tig0019825:96347-96366 | None:intergenic | 20.0% |
| !!! | TTTGCATTTGTTCTATATTT+TGG | - | tig0019825:96623-96642 | Msa1376600:intron | 20.0% |
| !!! | TTGTTCTATATTTTGGATTT+TGG | - | tig0019825:96630-96649 | Msa1376600:intron | 20.0% |
| !! | AATACATCATAATCTAAGTA+GGG | - | tig0019825:96687-96706 | Msa1376600:intron | 20.0% |
| !! | CTAAATGTTTACTATTACTA+GGG | - | tig0019825:96852-96871 | Msa1376600:intron | 20.0% |
| !!! | AGTTTCTCATTTTATTTTCT+AGG | - | tig0019825:97777-97796 | Msa1376600:intron | 20.0% |
| !!! | GTTTCTCATTTTATTTTCTA+GGG | - | tig0019825:97778-97797 | Msa1376600:intron | 20.0% |
| !! | ATTATGATAAGACTATAAGA+AGG | + | tig0019825:97864-97883 | None:intergenic | 20.0% |
| !! | CTATACAAAACTTATGAAAT+AGG | + | tig0019825:98446-98465 | None:intergenic | 20.0% |
| !!! | CTATTTCATAAGTTTTGTAT+AGG | - | tig0019825:98444-98463 | Msa1376600:intron | 20.0% |
| !! | AATAATTTACATAGGAAACA+GGG | + | tig0019825:98499-98518 | None:intergenic | 20.0% |
| !! | CTTATTGAAAATGAATTGAA+AGG | - | tig0019825:99239-99258 | Msa1376600:intron | 20.0% |
| !!! | ATTTTTCACCTTTTCATATT+CGG | + | tig0019825:100005-100024 | None:intergenic | 20.0% |
| !! | ATATTCAAAAAAGAACATAC+AGG | + | tig0019825:100351-100370 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTTTGAATATCA+TGG | - | tig0019825:100353-100372 | Msa1376600:intron | 20.0% |
| !!! | TTTTCATTTCACAAATACAA+AGG | + | tig0019825:100409-100428 | None:intergenic | 20.0% |
| !! | ATTTGTGAAATGAAAAGATA+TGG | - | tig0019825:100413-100432 | Msa1376600:intron | 20.0% |
| !! | GATAAAAAAAAACATCAAAG+TGG | - | tig0019825:100608-100627 | Msa1376600:intron | 20.0% |
| !! | ACGAAAATATAGTTGAATTT+CGG | + | tig0019825:101036-101055 | None:intergenic | 20.0% |
| !!! | CAACTATATTTTCGTATAAA+TGG | - | tig0019825:101041-101060 | Msa1376600:intron | 20.0% |
| !!! | ACTATATTTTCGTATAAATG+GGG | - | tig0019825:101043-101062 | Msa1376600:intron | 20.0% |
| !! | ATAGTCATAAATACTGTTTA+GGG | + | tig0019825:101186-101205 | None:intergenic | 20.0% |
| !! | GAATGCAGTAAATTATAATT+AGG | + | tig0019825:101321-101340 | None:intergenic | 20.0% |
| !! | CAAAAATAAATACAATCCAT+AGG | + | tig0019825:101444-101463 | None:intergenic | 20.0% |
| !!! | ACTTATATTGATTTTATCAG+AGG | - | tig0019825:101747-101766 | Msa1376600:intron | 20.0% |
| !!! | CTTATATTGATTTTATCAGA+GGG | - | tig0019825:101748-101767 | Msa1376600:intron | 20.0% |
| !! | TCAAATGTTTAATATGTTCT+TGG | + | tig0019825:102170-102189 | None:intergenic | 20.0% |
| !!! | GTATGTTTTAAATAGAGTAA+GGG | + | tig0019825:103434-103453 | None:intergenic | 20.0% |
| !!! | TGTATGTTTTAAATAGAGTA+AGG | + | tig0019825:103435-103454 | None:intergenic | 20.0% |
| !! | ATAAATGCTGGAAAATTAAA+AGG | + | tig0019825:103626-103645 | None:intergenic | 20.0% |
| !!! | TTTTCTCAGTTTTTTTCTTT+TGG | - | tig0019825:103693-103712 | Msa1376600:five_prime_UTR | 20.0% |
| !!! | AAGAAACAAATAACAAGTTT+TGG | - | tig0019825:103915-103934 | Msa1376600:five_prime_UTR | 20.0% |
| !! | TATAATACCTCCAATTAAAT+AGG | + | tig0019825:104137-104156 | None:intergenic | 20.0% |
| !!! | TTAATTGGAGGTATTATATT+CGG | - | tig0019825:104139-104158 | Msa1376600:intron | 20.0% |
| ! | ATGAAGTGTATGATAAAAGA+AGG | - | tig0019825:94478-94497 | Msa1376600:three_prime_UTR | 25.0% |
| ! | TGAAGTGTATGATAAAAGAA+GGG | - | tig0019825:94479-94498 | Msa1376600:three_prime_UTR | 25.0% |
| !!! | GATTTGTTATATTCTTTCGT+GGG | + | tig0019825:94690-94709 | None:intergenic | 25.0% |
| !!! | TGATTTGTTATATTCTTTCG+TGG | + | tig0019825:94691-94710 | None:intergenic | 25.0% |
| !!! | GTTTTTTCAAAGACAAACAA+AGG | + | tig0019825:95038-95057 | None:intergenic | 25.0% |
| !!! | AAATGGATTATTTGAGCTTA+GGG | + | tig0019825:95060-95079 | None:intergenic | 25.0% |
| !!! | AAAATGGATTATTTGAGCTT+AGG | + | tig0019825:95061-95080 | None:intergenic | 25.0% |
| ! | CAACTGTAAAACAAACAAAA+TGG | + | tig0019825:95077-95096 | None:intergenic | 25.0% |
| ! | CATTTCAAAGATTACACTTA+CGG | - | tig0019825:95201-95220 | Msa1376600:intron | 25.0% |
| !! | CATACAAATCAAAGTCTTAT+CGG | + | tig0019825:95256-95275 | None:intergenic | 25.0% |
| !!! | TTCTTAGTTTGTTCAATATC+TGG | + | tig0019825:95946-95965 | None:intergenic | 25.0% |
| !! | TGAACAAACTAAGAATCTTT+TGG | - | tig0019825:95951-95970 | Msa1376600:intron | 25.0% |
| ! | AGACATAAAATAAGATATCG+AGG | + | tig0019825:96050-96069 | None:intergenic | 25.0% |
| ! | TCACATTATCATTTATTCCT+TGG | - | tig0019825:96226-96245 | Msa1376600:intron | 25.0% |
| ! | CACATTATCATTTATTCCTT+GGG | - | tig0019825:96227-96246 | Msa1376600:intron | 25.0% |
| ! | TCTTTGTTAAAAATCAGCAA+TGG | + | tig0019825:96430-96449 | None:intergenic | 25.0% |
| ! | ATCAAATATGGAAATCGAAA+TGG | + | tig0019825:96492-96511 | None:intergenic | 25.0% |
| ! | AAACACTTCAATAATAGACA+AGG | + | tig0019825:96531-96550 | None:intergenic | 25.0% |
| !! | AAATACTTTTCCAAAACCTA+CGG | + | tig0019825:96568-96587 | None:intergenic | 25.0% |
| !! | TAGATTATGATGTATTGATC+AGG | + | tig0019825:96683-96702 | None:intergenic | 25.0% |
| ! | CAATACATCATAATCTAAGT+AGG | - | tig0019825:96686-96705 | Msa1376600:intron | 25.0% |
| ! | GCTAAATGTTTACTATTACT+AGG | - | tig0019825:96851-96870 | Msa1376600:intron | 25.0% |
| ! | ATATTACTACTACCTTCATA+TGG | - | tig0019825:96896-96915 | Msa1376600:intron | 25.0% |
| ! | AGAAGATAACTATTGTTTAC+TGG | - | tig0019825:97174-97193 | Msa1376600:intron | 25.0% |
| ! | AGTTATGGTAAAAAAAACTC+TGG | + | tig0019825:97263-97282 | None:intergenic | 25.0% |
| ! | ATGTCAAAGGAATAAGTATT+TGG | - | tig0019825:97329-97348 | Msa1376600:intron | 25.0% |
| ! | TGTAAGAAATTTGCAAATCA+TGG | + | tig0019825:97457-97476 | None:intergenic | 25.0% |
| ! | TGCACATGTATATAATTTGA+AGG | + | tig0019825:97506-97525 | None:intergenic | 25.0% |
| ! | TTCAAATTATATACATGTGC+AGG | - | tig0019825:97505-97524 | Msa1376600:intron | 25.0% |
| ! | AGAAAAATGAGAGATATGAA+GGG | + | tig0019825:97628-97647 | None:intergenic | 25.0% |
| !!! | TCATTTTATTTTCTAGGGAA+AGG | - | tig0019825:97783-97802 | Msa1376600:intron | 25.0% |
| ! | AATATTTAAGTCTCAATCCA+TGG | + | tig0019825:97918-97937 | None:intergenic | 25.0% |
| ! | ATATCTACATAATGTAGTCA+AGG | + | tig0019825:97955-97974 | None:intergenic | 25.0% |
| !! | AAATGCTATTGATTATTGCA+TGG | - | tig0019825:97993-98012 | Msa1376600:intron | 25.0% |
| ! | AAGAAGAAAGAAAATGAATC+AGG | + | tig0019825:98090-98109 | None:intergenic | 25.0% |
| !!! | TCTTTCTTCTTTCTTTTTTC+AGG | - | tig0019825:98099-98118 | Msa1376600:intron | 25.0% |
| !! | CTTAACTCCAATGAATTTTA+AGG | - | tig0019825:98150-98169 | Msa1376600:intron | 25.0% |
| ! | AAATGCACCTTAAAATTCAT+TGG | + | tig0019825:98160-98179 | None:intergenic | 25.0% |
| !!! | TGCTAAATTAATTAGTCTTG+AGG | - | tig0019825:98238-98257 | Msa1376600:intron | 25.0% |
| ! | AGAAATTCAAACATATGAAC+TGG | - | tig0019825:98317-98336 | Msa1376600:intron | 25.0% |
| ! | AACAGACATCTTTAAACTTA+CGG | - | tig0019825:98358-98377 | Msa1376600:intron | 25.0% |
| ! | ATAATTTACATAGGAAACAG+GGG | + | tig0019825:98498-98517 | None:intergenic | 25.0% |
| ! | CAATAATTTACATAGGAAAC+AGG | + | tig0019825:98500-98519 | None:intergenic | 25.0% |
| ! | ATTCTTGTCAAATGCTTATT+AGG | - | tig0019825:98719-98738 | Msa1376600:CDS | 25.0% |
| ! | TCAAATGCTTATTAGGTAAT+GGG | - | tig0019825:98726-98745 | Msa1376600:CDS | 25.0% |
| ! | AAAGACTTACATCTTTATCT+TGG | + | tig0019825:98838-98857 | None:intergenic | 25.0% |
| !! | AATCTAGTAATTTTCTCGTT+TGG | - | tig0019825:99089-99108 | Msa1376600:intron | 25.0% |
| !! | GTTTTTCTTTTGCATAAAAC+AGG | - | tig0019825:99394-99413 | Msa1376600:intron | 25.0% |
| !! | TTTTTCACCTTTTCATATTC+GGG | + | tig0019825:100004-100023 | None:intergenic | 25.0% |
| ! | TTTGAAAGGGAATAAAAACA+AGG | + | tig0019825:100052-100071 | None:intergenic | 25.0% |
| ! | TTTGTAGAGAAATTTAAGCA+CGG | - | tig0019825:100567-100586 | Msa1376600:intron | 25.0% |
| ! | ACGGTTAAAAATTGAGAAAT+AGG | - | tig0019825:100586-100605 | Msa1376600:intron | 25.0% |
| !! | TATCAGAACTGATTCAAATA+TGG | - | tig0019825:100674-100693 | Msa1376600:CDS | 25.0% |
| !! | ATCAGAACTGATTCAAATAT+GGG | - | tig0019825:100675-100694 | Msa1376600:CDS | 25.0% |
| ! | GATAGTCATAAATACTGTTT+AGG | + | tig0019825:101187-101206 | None:intergenic | 25.0% |
| ! | AAGAAAAGTTGAAGGAAATT+TGG | + | tig0019825:101221-101240 | None:intergenic | 25.0% |
| !!! | TGTTTTGTCTTTTGAAAACA+TGG | - | tig0019825:101722-101741 | Msa1376600:intron | 25.0% |
| !!! | GTTTTGTCTTTTGAAAACAT+GGG | - | tig0019825:101723-101742 | Msa1376600:intron | 25.0% |
| ! | ATCGTAATGAATTCAGAATT+CGG | + | tig0019825:101912-101931 | None:intergenic | 25.0% |
| !! | ATTCACAAATCAACAGTTTT+AGG | + | tig0019825:101975-101994 | None:intergenic | 25.0% |
| ! | CAGTTTCAAAATAGTTCAAA+AGG | + | tig0019825:102030-102049 | None:intergenic | 25.0% |
| !!! | CTTTTGAACTATTTTGAAAC+TGG | - | tig0019825:102028-102047 | Msa1376600:intron | 25.0% |
| ! | TGACTTGAATTTAATAAGAC+AGG | + | tig0019825:102260-102279 | None:intergenic | 25.0% |
| !! | TCCTTTAAAGAAAAAAGCTT+TGG | - | tig0019825:102417-102436 | Msa1376600:intron | 25.0% |
| !!! | TCCAAAGCTTTTTTCTTTAA+AGG | + | tig0019825:102421-102440 | None:intergenic | 25.0% |
| !!! | TAAAGAAAAAAGCTTTGGAA+TGG | - | tig0019825:102422-102441 | Msa1376600:intron | 25.0% |
| ! | AAACATATTCCATCCAAATT+AGG | - | tig0019825:102531-102550 | Msa1376600:intron | 25.0% |
| ! | GAAAAAATTCCTAATTTGGA+TGG | + | tig0019825:102543-102562 | None:intergenic | 25.0% |
| ! | GTGAGAAAAAATTCCTAATT+TGG | + | tig0019825:102547-102566 | None:intergenic | 25.0% |
| ! | GAAAATACAGATGAAATTGA+AGG | - | tig0019825:103301-103320 | Msa1376600:CDS | 25.0% |
| ! | ACATACAACTAAATTAGGAT+TGG | - | tig0019825:103448-103467 | Msa1376600:CDS | 25.0% |
| ! | TTCATTTAATGAATGTTCGT+AGG | + | tig0019825:103521-103540 | None:intergenic | 25.0% |
| !! | AAAAAACTGAGAAAAAGTGT+TGG | + | tig0019825:103688-103707 | None:intergenic | 25.0% |
| !!! | GGTATTTGTTTCTAATGAAT+AGG | - | tig0019825:103804-103823 | Msa1376600:five_prime_UTR | 25.0% |
| !! | TATTTGTTTCTTCAACCTTT+CGG | + | tig0019825:103907-103926 | None:intergenic | 25.0% |
| ! | CAATTATTTCATCACTGTTA+TGG | + | tig0019825:103946-103965 | None:intergenic | 25.0% |
| !! | TTTTCATCCTATTTAATTGG+AGG | - | tig0019825:104127-104146 | Msa1376600:intron | 25.0% |
| CACAAGTTAAGAAGCTAAAA+AGG | - | tig0019825:94526-94545 | Msa1376600:three_prime_UTR | 30.0% | |
| !! | GATGGATAAGTTTTTGATTG+CGG | + | tig0019825:94917-94936 | None:intergenic | 30.0% |
| CCAGTATAGTAAGTATTCTT+TGG | + | tig0019825:94982-95001 | None:intergenic | 30.0% | |
| CCAAAGAATACTTACTATAC+TGG | - | tig0019825:94979-94998 | Msa1376600:intron | 30.0% | |
| !! | GTAATCTTTGAAATGATGAG+TGG | + | tig0019825:95196-95215 | None:intergenic | 30.0% |
| TCAAAGATTTCATCAAAGAG+AGG | + | tig0019825:95348-95367 | None:intergenic | 30.0% | |
| AGATAGACAAATTGAACAGA+GGG | + | tig0019825:95657-95676 | None:intergenic | 30.0% | |
| AAGATAGACAAATTGAACAG+AGG | + | tig0019825:95658-95677 | None:intergenic | 30.0% | |
| TTGAAAACCCATATTTGTTC+CGG | + | tig0019825:96010-96029 | None:intergenic | 30.0% | |
| TATGAGGTATATACACAAAC+TGG | + | tig0019825:96281-96300 | None:intergenic | 30.0% | |
| GGCAACTAAGTATATATTGA+TGG | + | tig0019825:96326-96345 | None:intergenic | 30.0% | |
| CACTCATGATAGTACTTTAA+AGG | - | tig0019825:96453-96472 | Msa1376600:intron | 30.0% | |
| ACTTCAATAATAGACAAGGT+GGG | + | tig0019825:96527-96546 | None:intergenic | 30.0% | |
| !!! | GTAGGTTTTGGAAAAGTATT+TGG | - | tig0019825:96567-96586 | Msa1376600:intron | 30.0% |
| TCATAATCTAAGTAGGGTAA+AGG | - | tig0019825:96693-96712 | Msa1376600:intron | 30.0% | |
| CATGGTTTCGAACTAATTAA+AGG | + | tig0019825:97078-97097 | None:intergenic | 30.0% | |
| !! | AGCGATTAACAATTTTGAAG+CGG | + | tig0019825:97116-97135 | None:intergenic | 30.0% |
| AATTGTTAATCGCTCTAACA+TGG | - | tig0019825:97122-97141 | Msa1376600:CDS | 30.0% | |
| CTTTGACATCTCAAATTTAC+GGG | + | tig0019825:97318-97337 | None:intergenic | 30.0% | |
| CCTTTGACATCTCAAATTTA+CGG | + | tig0019825:97319-97338 | None:intergenic | 30.0% | |
| ACAAAATTTACCATGCCTAA+CGG | - | tig0019825:97362-97381 | Msa1376600:intron | 30.0% | |
| ATAATGATAGTTTGACCGTT+AGG | + | tig0019825:97380-97399 | None:intergenic | 30.0% | |
| ATATTCCGTTCACTAATGAT+AGG | - | tig0019825:97549-97568 | Msa1376600:intron | 30.0% | |
| CTGTGACAATAATAAATCCA+GGG | + | tig0019825:97580-97599 | None:intergenic | 30.0% | |
| GAGAAAAATGAGAGATATGA+AGG | + | tig0019825:97629-97648 | None:intergenic | 30.0% | |
| AAGACTATAAGAAGGATACT+TGG | + | tig0019825:97856-97875 | None:intergenic | 30.0% | |
| !!! | CTGCTACTTCACTTTTTTTA+AGG | - | tig0019825:98053-98072 | Msa1376600:intron | 30.0% |
| AGAAAATGAATCAGGAAACA+CGG | + | tig0019825:98082-98101 | None:intergenic | 30.0% | |
| TTAAGATCACATTAGACGAA+TGG | + | tig0019825:98135-98154 | None:intergenic | 30.0% | |
| ACAGACATCTTTAAACTTAC+GGG | - | tig0019825:98359-98378 | Msa1376600:intron | 30.0% | |
| TAGGAAACAAATTGAGAACA+AGG | + | tig0019825:98427-98446 | None:intergenic | 30.0% | |
| TAATTTACATAGGAAACAGG+GGG | + | tig0019825:98497-98516 | None:intergenic | 30.0% | |
| TTTGATCTGTGCTTAACATT+AGG | + | tig0019825:98580-98599 | None:intergenic | 30.0% | |
| ! | AATTTTCATTGGAGATCCTA+AGG | - | tig0019825:98561-98580 | Msa1376600:intron | 30.0% |
| AGCATTTGACAAGAATTAGT+AGG | + | tig0019825:98715-98734 | None:intergenic | 30.0% | |
| GTCAAATGCTTATTAGGTAA+TGG | - | tig0019825:98725-98744 | Msa1376600:CDS | 30.0% | |
| CAAATGCTTATTAGGTAATG+GGG | - | tig0019825:98727-98746 | Msa1376600:CDS | 30.0% | |
| TTTGTAATCTATGCAGCTTA+AGG | - | tig0019825:98799-98818 | Msa1376600:intron | 30.0% | |
| TCAACTACAATAAGTCAATC+AGG | + | tig0019825:98988-99007 | None:intergenic | 30.0% | |
| ! | GATTGACTTATTGTAGTTGA+AGG | - | tig0019825:98988-99007 | Msa1376600:intron | 30.0% |
| ! | TGGTTTTCGTTCATTTTCTT+GGG | - | tig0019825:99055-99074 | Msa1376600:intron | 30.0% |
| TGAGTTTAAGAACCATTAAG+AGG | - | tig0019825:99129-99148 | Msa1376600:intron | 30.0% | |
| AGAATGCTGGACTAATAATA+AGG | + | tig0019825:99211-99230 | None:intergenic | 30.0% | |
| TATGATCAAACTCTTCTACA+AGG | - | tig0019825:99285-99304 | Msa1376600:intron | 30.0% | |
| ! | TAAGACTAGTTAATCTGCAA+TGG | - | tig0019825:99467-99486 | Msa1376600:intron | 30.0% |
| ! | CTGTAAATTTTTATCACCAC+CGG | - | tig0019825:99527-99546 | Msa1376600:CDS | 30.0% |
| TTTAAATCCTGTGATAGACT+TGG | - | tig0019825:99976-99995 | Msa1376600:intron | 30.0% | |
| TTAAATCCTGTGATAGACTT+GGG | - | tig0019825:99977-99996 | Msa1376600:intron | 30.0% | |
| TATTACCTTCAATTGTCTAG+AGG | - | tig0019825:100267-100286 | Msa1376600:intron | 30.0% | |
| ATTACCTTCAATTGTCTAGA+GGG | - | tig0019825:100268-100287 | Msa1376600:intron | 30.0% | |
| TTGAAACACTAAGTGAAGTA+TGG | + | tig0019825:100302-100321 | None:intergenic | 30.0% | |
| TCAAATTTCTTAGAACCACT+TGG | - | tig0019825:100318-100337 | Msa1376600:intron | 30.0% | |
| CAAATTTCTTAGAACCACTT+GGG | - | tig0019825:100319-100338 | Msa1376600:intron | 30.0% | |
| AAATTTCTTAGAACCACTTG+GGG | - | tig0019825:100320-100339 | Msa1376600:intron | 30.0% | |
| ! | TCAGAACTGATTCAAATATG+GGG | - | tig0019825:100676-100695 | Msa1376600:CDS | 30.0% |
| AAATTCCAGTTTATCCTACA+AGG | + | tig0019825:100820-100839 | None:intergenic | 30.0% | |
| ! | ATTGTTCTATAGCAGTTTTG+AGG | - | tig0019825:100903-100922 | Msa1376600:intron | 30.0% |
| ! | ATAAATACTGTTTAGGGTCT+TGG | + | tig0019825:101180-101199 | None:intergenic | 30.0% |
| TGAACAAGAAGAAAAGTTGA+AGG | + | tig0019825:101229-101248 | None:intergenic | 30.0% | |
| TGCTACTAAATTTACACAGT+TGG | - | tig0019825:101379-101398 | Msa1376600:intron | 30.0% | |
| ATTTACACAGTTGGTTATGT+AGG | - | tig0019825:101388-101407 | Msa1376600:intron | 30.0% | |
| TTTACACAGTTGGTTATGTA+GGG | - | tig0019825:101389-101408 | Msa1376600:intron | 30.0% | |
| TTGAAATTGGAAATTCCAGA+TGG | - | tig0019825:101522-101541 | Msa1376600:intron | 30.0% | |
| TACAAGTCTTCTTCTTTCAA+TGG | - | tig0019825:101605-101624 | Msa1376600:intron | 30.0% | |
| ! | ATTCTTGTTTGTTTATTGGG+CGG | - | tig0019825:101633-101652 | Msa1376600:intron | 30.0% |
| !!! | AACGTTTGTTTTGTTTGAAC+TGG | - | tig0019825:101676-101695 | Msa1376600:intron | 30.0% |
| GTCTGGATACATAACTAAAA+GGG | + | tig0019825:101776-101795 | None:intergenic | 30.0% | |
| AGTCTGGATACATAACTAAA+AGG | + | tig0019825:101777-101796 | None:intergenic | 30.0% | |
| AATATCAAGATTATGACTCC+CGG | + | tig0019825:101836-101855 | None:intergenic | 30.0% | |
| TTAGGAATAACTGTAGCTTT+GGG | + | tig0019825:101957-101976 | None:intergenic | 30.0% | |
| TTTAGGAATAACTGTAGCTT+TGG | + | tig0019825:101958-101977 | None:intergenic | 30.0% | |
| TTGAATGATGTGGATCAAAT+GGG | + | tig0019825:102089-102108 | None:intergenic | 30.0% | |
| TTTGAATGATGTGGATCAAA+TGG | + | tig0019825:102090-102109 | None:intergenic | 30.0% | |
| !! | TCCAATTAAAGGAAGTATCA+GGG | + | tig0019825:102147-102166 | None:intergenic | 30.0% |
| TATGTTCTTGGTCCAATTAA+AGG | + | tig0019825:102158-102177 | None:intergenic | 30.0% | |
| ! | TTGAACCGACTTTATTTAAC+CGG | - | tig0019825:102301-102320 | Msa1376600:intron | 30.0% |
| !! | ATCAAGTATTGAATACCACA+AGG | - | tig0019825:102480-102499 | Msa1376600:intron | 30.0% |
| !! | TCAAGTATTGAATACCACAA+GGG | - | tig0019825:102481-102500 | Msa1376600:intron | 30.0% |
| ! | TTTTTCTCACTGATCACTTT+CGG | - | tig0019825:102557-102576 | Msa1376600:intron | 30.0% |
| TGTTACTGAAACTAAACAGA+GGG | - | tig0019825:102620-102639 | Msa1376600:intron | 30.0% | |
| ATTAAGGAATGACAATTGAG+CGG | - | tig0019825:102680-102699 | Msa1376600:CDS | 30.0% | |
| ! | ATGGCTTGGAATAAACAAAT+GGG | + | tig0019825:102781-102800 | None:intergenic | 30.0% |
| TACCCTCAGATTAAAATGAA+CGG | - | tig0019825:102974-102993 | Msa1376600:CDS | 30.0% | |
| !! | AACCGTTCATTTTAATCTGA+GGG | + | tig0019825:102979-102998 | None:intergenic | 30.0% |
| GATGAACATGAACGATTAAT+CGG | + | tig0019825:103098-103117 | None:intergenic | 30.0% | |
| !! | AATAATCCTTCCTTTTGAGT+TGG | - | tig0019825:103262-103281 | Msa1376600:CDS | 30.0% |
| AATACAGATGAAATTGAAGG+AGG | - | tig0019825:103304-103323 | Msa1376600:CDS | 30.0% | |
| ! | ATTTTGTACTAGTAACTGGT+TGG | + | tig0019825:103391-103410 | None:intergenic | 30.0% |
| !! | GGTTATTTTGTACTAGTAAC+TGG | + | tig0019825:103395-103414 | None:intergenic | 30.0% |
| CTATTAGGAATGTGTATGTT+AGG | + | tig0019825:103494-103513 | None:intergenic | 30.0% | |
| !! | CTATTAGTTAAAGCTTGTTG+GGG | + | tig0019825:103591-103610 | None:intergenic | 30.0% |
| ! | GCTATTAGTTAAAGCTTGTT+GGG | + | tig0019825:103592-103611 | None:intergenic | 30.0% |
| TGCTATTAGTTAAAGCTTGT+TGG | + | tig0019825:103593-103612 | None:intergenic | 30.0% | |
| !! | AAAAGTGTTGGTTAATCAAG+AGG | + | tig0019825:103676-103695 | None:intergenic | 30.0% |
| ATTACTTTGTGCCAATTTAC+AGG | - | tig0019825:103729-103748 | Msa1376600:five_prime_UTR | 30.0% | |
| TAAAGAGAAAAGCTAACTGA+TGG | + | tig0019825:103877-103896 | None:intergenic | 30.0% | |
| !!! | AGTTAGCTTTTCTCTTTACT+GGG | - | tig0019825:103879-103898 | Msa1376600:five_prime_UTR | 30.0% |
| CTAAAAGCTAAAAAGCTACA+AGG | + | tig0019825:103988-104007 | None:intergenic | 30.0% | |
| GACTTATTGTTATATACCGA+CGG | - | tig0019825:104166-104185 | Msa1376600:intron | 30.0% | |
| !! | CTTCTTAACTTGTGTCCTTA+GGG | + | tig0019825:94520-94539 | None:intergenic | 35.0% |
| TACGATCTGTTATGCTTTGA+AGG | - | tig0019825:94948-94967 | Msa1376600:intron | 35.0% | |
| !! | GTAAGTATTCTTTGGAACAG+CGG | + | tig0019825:94974-94993 | None:intergenic | 35.0% |
| GATTTCATCAAAGAGAGGAT+TGG | + | tig0019825:95343-95362 | None:intergenic | 35.0% | |
| CTTTGAGCTTATGTCCAAAA+AGG | - | tig0019825:95362-95381 | Msa1376600:intron | 35.0% | |
| GATAGACAAATTGAACAGAG+GGG | + | tig0019825:95656-95675 | None:intergenic | 35.0% | |
| GAGAGAAAGTAGAAAAGTTG+TGG | + | tig0019825:95876-95895 | None:intergenic | 35.0% | |
| TCTGCAATGGATATTTGTGA+CGG | - | tig0019825:96131-96150 | Msa1376600:intron | 35.0% | |
| CTTGATCATTAACCAGATTG+AGG | - | tig0019825:96169-96188 | Msa1376600:intron | 35.0% | |
| ATAAATGTCTGACCTCAATC+TGG | + | tig0019825:96184-96203 | None:intergenic | 35.0% | |
| TGAGTTGCATATGTTGTATG+AGG | + | tig0019825:96297-96316 | None:intergenic | 35.0% | |
| TAAAAATCAGCAATGGAACC+CGG | + | tig0019825:96423-96442 | None:intergenic | 35.0% | |
| CACTTCAATAATAGACAAGG+TGG | + | tig0019825:96528-96547 | None:intergenic | 35.0% | |
| TTAACTTCATCATCTTCCGT+AGG | - | tig0019825:96549-96568 | Msa1376600:intron | 35.0% | |
| CGGTGAATGTGAATATATCA+TGG | + | tig0019825:97096-97115 | None:intergenic | 35.0% | |
| ! | CCGTAAATTTGAGATGTCAA+AGG | - | tig0019825:97316-97335 | Msa1376600:intron | 35.0% |
| TTCCACCTATCATTAGTGAA+CGG | + | tig0019825:97557-97576 | None:intergenic | 35.0% | |
| CCTGTGACAATAATAAATCC+AGG | + | tig0019825:97581-97600 | None:intergenic | 35.0% | |
| CCTGGATTTATTATTGTCAC+AGG | - | tig0019825:97578-97597 | Msa1376600:intron | 35.0% | |
| TGCTCGTATATGTGCATATT+TGG | - | tig0019825:97722-97741 | Msa1376600:intron | 35.0% | |
| GCTCGTATATGTGCATATTT+GGG | - | tig0019825:97723-97742 | Msa1376600:intron | 35.0% | |
| ! | TGCTATTGATTATTGCATGG+AGG | - | tig0019825:97996-98015 | Msa1376600:intron | 35.0% |
| AATGTTCAAGACACTGAATG+AGG | + | tig0019825:98193-98212 | None:intergenic | 35.0% | |
| GTGTCTTGAACATTTGTTCT+AGG | - | tig0019825:98199-98218 | Msa1376600:intron | 35.0% | |
| TACTTGTATATACTGCCACA+GGG | + | tig0019825:98275-98294 | None:intergenic | 35.0% | |
| !! | TGAACTGGAAAAGTATCATG+AGG | - | tig0019825:98332-98351 | Msa1376600:intron | 35.0% |
| GAAATGGAAACAGATCAAAG+AGG | - | tig0019825:98526-98545 | Msa1376600:CDS | 35.0% | |
| ATGTTAAGCACAGATCAAAG+AGG | - | tig0019825:98581-98600 | Msa1376600:intron | 35.0% | |
| CTCAAAATGTGCTTAACCTT+AGG | + | tig0019825:98635-98654 | None:intergenic | 35.0% | |
| !! | TATTAGGTAATGGGGTGATT+TGG | - | tig0019825:98735-98754 | Msa1376600:CDS | 35.0% |
| ! | AATAAGCTCACAAGTCTTGT+TGG | + | tig0019825:98927-98946 | None:intergenic | 35.0% |
| !! | CTGGTTTTCGTTCATTTTCT+TGG | - | tig0019825:99054-99073 | Msa1376600:intron | 35.0% |
| AGTGTCAAAAAGCCTCTTAA+TGG | + | tig0019825:99144-99163 | None:intergenic | 35.0% | |
| !! | AATTGTACCTTTGAGATTGG+GGG | + | tig0019825:99188-99207 | None:intergenic | 35.0% |
| !! | GAATTGTACCTTTGAGATTG+GGG | + | tig0019825:99189-99208 | None:intergenic | 35.0% |
| !! | GGAATTGTACCTTTGAGATT+GGG | + | tig0019825:99190-99209 | None:intergenic | 35.0% |
| !! | AGGAATTGTACCTTTGAGAT+TGG | + | tig0019825:99191-99210 | None:intergenic | 35.0% |
| AATGAAAATACCTGTACTGC+CGG | + | tig0019825:99324-99343 | None:intergenic | 35.0% | |
| ACTACAGTCTCAAATTCGAA+CGG | + | tig0019825:99424-99443 | None:intergenic | 35.0% | |
| CGGTGGTGATAAAAATTTAC+AGG | + | tig0019825:99529-99548 | None:intergenic | 35.0% | |
| CACTGAAGCTTATTTCAGTT+AGG | - | tig0019825:99559-99578 | Msa1376600:intron | 35.0% | |
| TAGTATATTTCCTCTGCACT+AGG | + | tig0019825:99621-99640 | None:intergenic | 35.0% | |
| CAATCGCATTATCAAAGAAC+TGG | + | tig0019825:99738-99757 | None:intergenic | 35.0% | |
| !! | CAGTTCTTTGATAATGCGAT+TGG | - | tig0019825:99736-99755 | Msa1376600:intron | 35.0% |
| AAATCTGATGTTGCATCCAA+GGG | + | tig0019825:99790-99809 | None:intergenic | 35.0% | |
| TAAATCTGATGTTGCATCCA+AGG | + | tig0019825:99791-99810 | None:intergenic | 35.0% | |
| AAGGATACATAATTGGTGAG+AGG | + | tig0019825:99893-99912 | None:intergenic | 35.0% | |
| TGACTGCAAGGATACATAAT+TGG | + | tig0019825:99900-99919 | None:intergenic | 35.0% | |
| ! | GATCTATACACTTCTAGAGA+AGG | - | tig0019825:99920-99939 | Msa1376600:intron | 35.0% |
| ! | TATCACAGGATTTAAAGCGT+CGG | + | tig0019825:99972-99991 | None:intergenic | 35.0% |
| AGGGAATAAAAACAAGGCAT+GGG | + | tig0019825:100046-100065 | None:intergenic | 35.0% | |
| AAGGGAATAAAAACAAGGCA+TGG | + | tig0019825:100047-100066 | None:intergenic | 35.0% | |
| ! | AAATCCATTCCAAGTATCGT+GGG | - | tig0019825:100123-100142 | Msa1376600:intron | 35.0% |
| TTGGATAGTTTGATTGTGAG+AGG | - | tig0019825:100147-100166 | Msa1376600:intron | 35.0% | |
| TGGGGCAAATATTACTTTGA+AGG | - | tig0019825:100182-100201 | Msa1376600:intron | 35.0% | |
| ACTAAGTGAAGTATGGAGTA+TGG | + | tig0019825:100295-100314 | None:intergenic | 35.0% | |
| !! | CACTCTAAGGTGAAAAAAAC+GGG | + | tig0019825:100471-100490 | None:intergenic | 35.0% |
| !! | CCACTCTAAGGTGAAAAAAA+CGG | + | tig0019825:100472-100491 | None:intergenic | 35.0% |
| !!! | CGTTTTTTTCACCTTAGAGT+GGG | - | tig0019825:100470-100489 | Msa1376600:intron | 35.0% |
| TATGGTGTATCAGAGAAAGT+CGG | - | tig0019825:100496-100515 | Msa1376600:intron | 35.0% | |
| TATCAGAGAAAGTCGGAATT+AGG | - | tig0019825:100503-100522 | Msa1376600:intron | 35.0% | |
| TCTGATATTGCACTGCAATT+TGG | + | tig0019825:100661-100680 | None:intergenic | 35.0% | |
| !! | AATATGGGGATTTGTTGATG+TGG | - | tig0019825:100690-100709 | Msa1376600:intron | 35.0% |
| AGCGCATGAATAGTATTGTT+AGG | - | tig0019825:100763-100782 | Msa1376600:intron | 35.0% | |
| GCGCATGAATAGTATTGTTA+GGG | - | tig0019825:100764-100783 | Msa1376600:intron | 35.0% | |
| !! | TTCATCATGCAAGAGTACTT+TGG | - | tig0019825:100961-100980 | Msa1376600:intron | 35.0% |
| !! | TCATCATGCAAGAGTACTTT+GGG | - | tig0019825:100962-100981 | Msa1376600:intron | 35.0% |
| ! | TATAGTTGAATTTCGGTGCA+AGG | + | tig0019825:101029-101048 | None:intergenic | 35.0% |
| GATTATCCAGGAAAGAGATA+AGG | + | tig0019825:101095-101114 | None:intergenic | 35.0% | |
| AAACTGATGTATCTCTTTCC+TGG | + | tig0019825:101117-101136 | None:intergenic | 35.0% | |
| ! | TAAGTTTTCTGCTTTCCATG+TGG | - | tig0019825:101257-101276 | Msa1376600:intron | 35.0% |
| TGTCAATCTTCTATTCCACA+TGG | + | tig0019825:101275-101294 | None:intergenic | 35.0% | |
| ATACAATCCATAGGTCTTTC+AGG | + | tig0019825:101435-101454 | None:intergenic | 35.0% | |
| TGGAGTTGTGATTGAGAATA+AGG | - | tig0019825:101542-101561 | Msa1376600:intron | 35.0% | |
| ACTGGTATAACAGACATCAT+TGG | - | tig0019825:101694-101713 | Msa1376600:intron | 35.0% | |
| !! | TATGACTGGTTTGAATGATG+TGG | + | tig0019825:102099-102118 | None:intergenic | 35.0% |
| !!! | GGCTTTGGAATTTTTATGAC+TGG | + | tig0019825:102113-102132 | None:intergenic | 35.0% |
| !! | GTCCAATTAAAGGAAGTATC+AGG | + | tig0019825:102148-102167 | None:intergenic | 35.0% |
| ! | TGAACCGACTTTATTTAACC+GGG | - | tig0019825:102302-102321 | Msa1376600:intron | 35.0% |
| TGTTCCCGGTTAAATAAAGT+CGG | + | tig0019825:102309-102328 | None:intergenic | 35.0% | |
| CAATTGAAAGGGAACATTGA+GGG | + | tig0019825:102338-102357 | None:intergenic | 35.0% | |
| AATGTTCCCTTTCAATTGCT+AGG | - | tig0019825:102340-102359 | Msa1376600:intron | 35.0% | |
| CTGTTACTGAAACTAAACAG+AGG | - | tig0019825:102619-102638 | Msa1376600:intron | 35.0% | |
| TGAACAGGACAAGGAAATTA+AGG | - | tig0019825:102664-102683 | Msa1376600:CDS | 35.0% | |
| GAGTAAGGTTTCCAAAGTTT+GGG | + | tig0019825:102727-102746 | None:intergenic | 35.0% | |
| ! | CAAACTTTGGAAACCTTACT+CGG | - | tig0019825:102726-102745 | Msa1376600:intron | 35.0% |
| AATAAACAAATGGGGAGGAA+AGG | + | tig0019825:102772-102791 | None:intergenic | 35.0% | |
| ! | TGGCTTGGAATAAACAAATG+GGG | + | tig0019825:102780-102799 | None:intergenic | 35.0% |
| ! | GATGGCTTGGAATAAACAAA+TGG | + | tig0019825:102782-102801 | None:intergenic | 35.0% |
| ACAAAGGAATGGAATGTGTT+GGG | + | tig0019825:102845-102864 | None:intergenic | 35.0% | |
| !! | GAACCGTTCATTTTAATCTG+AGG | + | tig0019825:102980-102999 | None:intergenic | 35.0% |
| TAACCAACACAGAGAAGAAA+AGG | - | tig0019825:103061-103080 | Msa1376600:CDS | 35.0% | |
| ! | TTTCCTTTTCTTCTCTGTGT+TGG | + | tig0019825:103067-103086 | None:intergenic | 35.0% |
| !! | TTGATGTCTTCTTTTGAGTG+TGG | + | tig0019825:103144-103163 | None:intergenic | 35.0% |
| CAATGCATAACCAACTCAAA+AGG | + | tig0019825:103275-103294 | None:intergenic | 35.0% | |
| AGATGAAATTGAAGGAGGAA+AGG | - | tig0019825:103309-103328 | Msa1376600:CDS | 35.0% | |
| GATGAAATTGAAGGAGGAAA+GGG | - | tig0019825:103310-103329 | Msa1376600:CDS | 35.0% | |
| ATGTTCGTAGGCATACTATT+AGG | + | tig0019825:103509-103528 | None:intergenic | 35.0% | |
| GCTGAAATTGTCATAAATGC+TGG | + | tig0019825:103638-103657 | None:intergenic | 35.0% | |
| TGCAGATATCCAAGAATGAA+TGG | - | tig0019825:103765-103784 | Msa1376600:five_prime_UTR | 35.0% | |
| ATTGGTGAACCATTCATTCT+TGG | + | tig0019825:103777-103796 | None:intergenic | 35.0% | |
| AAACAAATACCCCTCAACAT+TGG | + | tig0019825:103795-103814 | None:intergenic | 35.0% | |
| ! | AGCTTTGTAACTGTATTGCA+CGG | + | tig0019825:103852-103871 | None:intergenic | 35.0% |
| !!! | CAGTTAGCTTTTCTCTTTAC+TGG | - | tig0019825:103878-103897 | Msa1376600:five_prime_UTR | 35.0% |
| GAAGAGACTATGTAGTATCA+AGG | + | tig0019825:104065-104084 | None:intergenic | 35.0% | |
| TTGTTTACTGTACAACGAGT+TGG | - | tig0019825:104087-104106 | Msa1376600:intron | 35.0% | |
| !! | GTAAGATTTTGTTGTACCGT+CGG | + | tig0019825:104185-104204 | None:intergenic | 35.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | tig0019825:94502-94521 | Msa1376600:three_prime_UTR | 40.0% |
| !! | GCTTCTTAACTTGTGTCCTT+AGG | + | tig0019825:94521-94540 | None:intergenic | 40.0% |
| AATTGTGCTCTTGAGACTTG+AGG | + | tig0019825:94659-94678 | None:intergenic | 40.0% | |
| AAGCTGAAATAAGAGGGAGA+GGG | + | tig0019825:94857-94876 | None:intergenic | 40.0% | |
| !! | GGATAAGTTTTTGATTGCGG+TGG | + | tig0019825:94914-94933 | None:intergenic | 40.0% |
| CTTAGCACAAATGCACACAT+TGG | - | tig0019825:95159-95178 | Msa1376600:intron | 40.0% | |
| GAGCTTATGTCCAAAAAGGT+TGG | - | tig0019825:95366-95385 | Msa1376600:intron | 40.0% | |
| TTGCGAGATCGAAACTTCTT+GGG | + | tig0019825:95456-95475 | None:intergenic | 40.0% | |
| ATCGACAATGACGATGCAAT+CGG | + | tig0019825:95511-95530 | None:intergenic | 40.0% | |
| CAAGTCTTCTGTTATCGATG+AGG | - | tig0019825:95539-95558 | Msa1376600:intron | 40.0% | |
| AATTGAACAGAGGGGTTAAC+AGG | + | tig0019825:95648-95667 | None:intergenic | 40.0% | |
| AACTTCTTGACGATCATCTG+AGG | - | tig0019825:95739-95758 | Msa1376600:intron | 40.0% | |
| ACTTCTTGACGATCATCTGA+GGG | - | tig0019825:95740-95759 | Msa1376600:intron | 40.0% | |
| ATTACTCTTCTCCTTCTCCT+TGG | + | tig0019825:95778-95797 | None:intergenic | 40.0% | |
| GGAGAAGGAGAAGAGTAATT+TGG | - | tig0019825:95779-95798 | Msa1376600:intron | 40.0% | |
| AGTAATTTGGCAGCTAAGCT+TGG | - | tig0019825:95792-95811 | Msa1376600:intron | 40.0% | |
| AAGGGTGATATAGCATCGTA+GGG | + | tig0019825:95831-95850 | None:intergenic | 40.0% | |
| AAAACCCATATTTGTTCCGG+AGG | + | tig0019825:96007-96026 | None:intergenic | 40.0% | |
| TATCGAGGAATGCTTACTTG+AGG | + | tig0019825:96035-96054 | None:intergenic | 40.0% | |
| TTGCAGATCTACATGAAAGC+AGG | + | tig0019825:96118-96137 | None:intergenic | 40.0% | |
| GCTTTCATGTAGATCTGCAA+TGG | - | tig0019825:96118-96137 | Msa1376600:intron | 40.0% | |
| ! | AATATTTTGCAACAGGCCCA+AGG | + | tig0019825:96246-96265 | None:intergenic | 40.0% |
| ! | TCATCATCTTCCGTAGGTTT+TGG | - | tig0019825:96555-96574 | Msa1376600:intron | 40.0% |
| ! | CCATCTGATAATGTTAGCTC+TGG | + | tig0019825:96720-96739 | None:intergenic | 40.0% |
| CCAGAGCTAACATTATCAGA+TGG | - | tig0019825:96717-96736 | Msa1376600:intron | 40.0% | |
| ATCAGATGGACATAGCAGTA+AGG | - | tig0019825:96731-96750 | Msa1376600:intron | 40.0% | |
| TTCCGTTCACTAATGATAGG+TGG | - | tig0019825:97552-97571 | Msa1376600:intron | 40.0% | |
| TTAAGTCTCAATCCATGGTC+AGG | + | tig0019825:97913-97932 | None:intergenic | 40.0% | |
| ATCACATTAGACGAATGGCT+TGG | + | tig0019825:98130-98149 | None:intergenic | 40.0% | |
| TTCAAGACACTGAATGAGGA+GGG | + | tig0019825:98189-98208 | None:intergenic | 40.0% | |
| CTACTTGTATATACTGCCAC+AGG | + | tig0019825:98276-98295 | None:intergenic | 40.0% | |
| ATCCATTGCACTTATCTGCA+TGG | - | tig0019825:98670-98689 | Msa1376600:CDS | 40.0% | |
| CAAACATGTGAGTGAAATGC+TGG | - | tig0019825:99035-99054 | Msa1376600:intron | 40.0% | |
| ATAAGAGAGCAGTAGAATGC+TGG | + | tig0019825:99224-99243 | None:intergenic | 40.0% | |
| TTGATCATAGTCATCCTCCT+GGG | + | tig0019825:99274-99293 | None:intergenic | 40.0% | |
| TTTGATCATAGTCATCCTCC+TGG | + | tig0019825:99275-99294 | None:intergenic | 40.0% | |
| TAGTTAATCTGCAATGGTGC+AGG | - | tig0019825:99473-99492 | Msa1376600:intron | 40.0% | |
| AGCTTCAGTGTTTATAGCAC+CGG | + | tig0019825:99549-99568 | None:intergenic | 40.0% | |
| TCCTCTGCACTAGGTTATAA+AGG | + | tig0019825:99612-99631 | None:intergenic | 40.0% | |
| AACAAAACGAGATTCGGGTA+TGG | + | tig0019825:99767-99786 | None:intergenic | 40.0% | |
| AAGGGAACAAAACGAGATTC+GGG | + | tig0019825:99772-99791 | None:intergenic | 40.0% | |
| CAAGGGAACAAAACGAGATT+CGG | + | tig0019825:99773-99792 | None:intergenic | 40.0% | |
| ATCAGATTTACTGCTTCTGC+AGG | - | tig0019825:99801-99820 | Msa1376600:intron | 40.0% | |
| AGTGTATAGATCTGACTGCA+AGG | + | tig0019825:99912-99931 | None:intergenic | 40.0% | |
| ATGTTCCATTCTCAGATTGC+TGG | - | tig0019825:100084-100103 | Msa1376600:intron | 40.0% | |
| ! | CAAATCCATTCCAAGTATCG+TGG | - | tig0019825:100122-100141 | Msa1376600:intron | 40.0% |
| ! | AATCCATTCCAAGTATCGTG+GGG | - | tig0019825:100124-100143 | Msa1376600:intron | 40.0% |
| !!! | CCGTTTTTTTCACCTTAGAG+TGG | - | tig0019825:100469-100488 | Msa1376600:intron | 40.0% |
| !! | TAGGTTAGCCTGCATTATGA+GGG | - | tig0019825:100722-100741 | Msa1376600:intron | 40.0% |
| AGTTTATCCTACAAGGACCA+AGG | + | tig0019825:100813-100832 | None:intergenic | 40.0% | |
| TTGGTCCTTGTAGGATAAAC+TGG | - | tig0019825:100812-100831 | Msa1376600:intron | 40.0% | |
| GGGTTTGAAGAAGCAAAACA+TGG | - | tig0019825:100982-101001 | Msa1376600:intron | 40.0% | |
| ACCTTACCTTATCTCTTTCC+TGG | - | tig0019825:101086-101105 | Msa1376600:CDS | 40.0% | |
| TCCAGGAAAGAGATAAGGTA+AGG | + | tig0019825:101090-101109 | None:intergenic | 40.0% | |
| ATCTCTTTCCTGGATAATCC+AGG | - | tig0019825:101096-101115 | Msa1376600:CDS | 40.0% | |
| ATCTCTTTCCTGGATTATCC+AGG | + | tig0019825:101107-101126 | None:intergenic | 40.0% | |
| CGTGACTATTGTTGCAAAAC+CGG | - | tig0019825:101497-101516 | Msa1376600:intron | 40.0% | |
| GTGACTATTGTTGCAAAACC+GGG | - | tig0019825:101498-101517 | Msa1376600:intron | 40.0% | |
| GGAATTTCCAATTTCAAGCC+CGG | + | tig0019825:101519-101538 | None:intergenic | 40.0% | |
| TTCTCAATCACAACTCCATC+TGG | + | tig0019825:101540-101559 | None:intergenic | 40.0% | |
| TGCATGAGATATTTGCAGTC+TGG | + | tig0019825:101793-101812 | None:intergenic | 40.0% | |
| TATCTCATGCACGATTCCAA+TGG | - | tig0019825:101802-101821 | Msa1376600:intron | 40.0% | |
| AATTTCAGAGTCCAGCAGAA+AGG | + | tig0019825:101882-101901 | None:intergenic | 40.0% | |
| AAAAGGACCAAGTTTGAGCA+TGG | + | tig0019825:102013-102032 | None:intergenic | 40.0% | |
| !!! | TTTTGAAACTGGCCCTCTAA+CGG | - | tig0019825:102039-102058 | Msa1376600:intron | 40.0% |
| GCCCTGATACTTCCTTTAAT+TGG | - | tig0019825:102143-102162 | Msa1376600:intron | 40.0% | |
| !!! | AATGCTGCAAGTTGCTTTTC+AGG | - | tig0019825:102219-102238 | Msa1376600:CDS | 40.0% |
| GGTTCAAGAATCACATGCTA+AGG | + | tig0019825:102288-102307 | None:intergenic | 40.0% | |
| GCAATTGAAAGGGAACATTG+AGG | + | tig0019825:102339-102358 | None:intergenic | 40.0% | |
| ATGCTGCCTAGCAATTGAAA+GGG | + | tig0019825:102349-102368 | None:intergenic | 40.0% | |
| ACTTGAAGTACATGCTGCAT+TGG | - | tig0019825:102375-102394 | Msa1376600:intron | 40.0% | |
| CTACATAGATCTCTGTGAAC+AGG | - | tig0019825:102649-102668 | Msa1376600:CDS | 40.0% | |
| ATTGAGCGGTAGGCTATTTA+AGG | - | tig0019825:102694-102713 | Msa1376600:CDS | 40.0% | |
| ! | AGGTTTCCAAAGTTTGGGAT+AGG | + | tig0019825:102722-102741 | None:intergenic | 40.0% |
| CGAGTAAGGTTTCCAAAGTT+TGG | + | tig0019825:102728-102747 | None:intergenic | 40.0% | |
| CTTGGAATAAACAAATGGGG+AGG | + | tig0019825:102777-102796 | None:intergenic | 40.0% | |
| GACAAAGGAATGGAATGTGT+TGG | + | tig0019825:102846-102865 | None:intergenic | 40.0% | |
| !! | TGAGAGGAGTATTTAGTGAG+AGG | - | tig0019825:102934-102953 | Msa1376600:CDS | 40.0% |
| AGTATTTAGTGAGAGGTGAC+AGG | - | tig0019825:102941-102960 | Msa1376600:CDS | 40.0% | |
| !! | TTTTGAGTGTGGATGCTTTG+GGG | + | tig0019825:103133-103152 | None:intergenic | 40.0% |
| !! | CTTTTGAGTGTGGATGCTTT+GGG | + | tig0019825:103134-103153 | None:intergenic | 40.0% |
| !! | TCTTTTGAGTGTGGATGCTT+TGG | + | tig0019825:103135-103154 | None:intergenic | 40.0% |
| ! | GTATCAGAAGTACACAATCC+TGG | + | tig0019825:103174-103193 | None:intergenic | 40.0% |
| !! | ACCAGTTGATAGAACCTTGT+AGG | - | tig0019825:103192-103211 | Msa1376600:CDS | 40.0% |
| TCCTACAAGGTTCTATCAAC+TGG | + | tig0019825:103196-103215 | None:intergenic | 40.0% | |
| GTATTCGTACGAATCCTACA+AGG | + | tig0019825:103209-103228 | None:intergenic | 40.0% | |
| GATTCGTACGAATACTGAAC+AGG | - | tig0019825:103214-103233 | Msa1376600:CDS | 40.0% | |
| GCATAACCAACTCAAAAGGA+AGG | + | tig0019825:103271-103290 | None:intergenic | 40.0% | |
| TGTACTAGTAACTGGTTGGT+TGG | + | tig0019825:103387-103406 | None:intergenic | 40.0% | |
| TAAATAGAGTAAGGGAGAGC+AGG | + | tig0019825:103426-103445 | None:intergenic | 40.0% | |
| GTCGTTGATCTCCTGTAAAT+TGG | + | tig0019825:103743-103762 | None:intergenic | 40.0% | |
| TGAATGGTTCACCAATGTTG+AGG | - | tig0019825:103781-103800 | Msa1376600:five_prime_UTR | 40.0% | |
| GAATGGTTCACCAATGTTGA+GGG | - | tig0019825:103782-103801 | Msa1376600:five_prime_UTR | 40.0% | |
| AATGGTTCACCAATGTTGAG+GGG | - | tig0019825:103783-103802 | Msa1376600:five_prime_UTR | 40.0% | |
| ATCAGAGAAAGAGGCAACAG+TGG | + | tig0019825:94784-94803 | None:intergenic | 45.0% | |
| AGCTGAAATAAGAGGGAGAG+GGG | + | tig0019825:94856-94875 | None:intergenic | 45.0% | |
| CAAGCTGAAATAAGAGGGAG+AGG | + | tig0019825:94858-94877 | None:intergenic | 45.0% | |
| CGACGCAAGCTGAAATAAGA+GGG | + | tig0019825:94863-94882 | None:intergenic | 45.0% | |
| ACGACGCAAGCTGAAATAAG+AGG | + | tig0019825:94864-94883 | None:intergenic | 45.0% | |
| GATCGTACTAACAACGACGA+TGG | + | tig0019825:94935-94954 | None:intergenic | 45.0% | |
| AATGATGAGTGGCGACTTGA+CGG | + | tig0019825:95185-95204 | None:intergenic | 45.0% | |
| TGATTGCCATTCTGTTGCGA+AGG | + | tig0019825:95227-95246 | None:intergenic | 45.0% | |
| TCTTCCCTTGCTCGTCATAA+TGG | - | tig0019825:95297-95316 | Msa1376600:intron | 45.0% | |
| ! | GCTGTAGCATCCAACCTTTT+TGG | + | tig0019825:95379-95398 | None:intergenic | 45.0% |
| GTTGCGAGATCGAAACTTCT+TGG | + | tig0019825:95457-95476 | None:intergenic | 45.0% | |
| CGCAACAAGAAACTCTGCTT+CGG | - | tig0019825:95471-95490 | Msa1376600:intron | 45.0% | |
| TCGACAATGACGATGCAATC+GGG | + | tig0019825:95510-95529 | None:intergenic | 45.0% | |
| GAATCGACAAGAGCGACAAT+TGG | + | tig0019825:95582-95601 | None:intergenic | 45.0% | |
| AAGCAATGCGGCTGAAAGTA+TGG | + | tig0019825:95617-95636 | None:intergenic | 45.0% | |
| CAGGAATGGGATAAGCAATG+CGG | + | tig0019825:95629-95648 | None:intergenic | 45.0% | |
| ACAGAGGGGTTAACAGGAAT+GGG | + | tig0019825:95642-95661 | None:intergenic | 45.0% | |
| AACAGAGGGGTTAACAGGAA+TGG | + | tig0019825:95643-95662 | None:intergenic | 45.0% | |
| ! | CTTCTCGAGAAGCAGTGTTT+TGG | + | tig0019825:95697-95716 | None:intergenic | 45.0% |
| AGGGTGATATAGCATCGTAG+GGG | + | tig0019825:95830-95849 | None:intergenic | 45.0% | |
| CAAGGGTGATATAGCATCGT+AGG | + | tig0019825:95832-95851 | None:intergenic | 45.0% | |
| TGGTGTACTACTACCTTGAG+GGG | + | tig0019825:95856-95875 | None:intergenic | 45.0% | |
| GTGGTGTACTACTACCTTGA+GGG | + | tig0019825:95857-95876 | None:intergenic | 45.0% | |
| TGTGGTGTACTACTACCTTG+AGG | + | tig0019825:95858-95877 | None:intergenic | 45.0% | |
| TTGAAGCTCAATCATGCCTC+CGG | - | tig0019825:95988-96007 | Msa1376600:intron | 45.0% | |
| TCATGCCTCCGGAACAAATA+TGG | - | tig0019825:95999-96018 | Msa1376600:intron | 45.0% | |
| CATGCCTCCGGAACAAATAT+GGG | - | tig0019825:96000-96019 | Msa1376600:intron | 45.0% | |
| TAGACCCTCAACTCCAAGTA+CGG | - | tig0019825:96394-96413 | Msa1376600:intron | 45.0% | |
| ! | AAAAGTGCGCACATCAATGC+TGG | + | tig0019825:96596-96615 | None:intergenic | 45.0% |
| ! | TGATGTGCGCACTTTTAAGC+AGG | - | tig0019825:96600-96619 | Msa1376600:intron | 45.0% |
| AGATGGACATAGCAGTAAGG+AGG | - | tig0019825:96734-96753 | Msa1376600:intron | 45.0% | |
| GTATGCATCTAAGCTACTGC+TGG | + | tig0019825:96933-96952 | None:intergenic | 45.0% | |
| GATAGTTTGACCGTTAGGCA+TGG | + | tig0019825:97375-97394 | None:intergenic | 45.0% | |
| TGCAGGCATACATTTGACGA+TGG | - | tig0019825:97522-97541 | Msa1376600:intron | 45.0% | |
| ACTAATGATAGGTGGAACCC+TGG | - | tig0019825:97560-97579 | Msa1376600:intron | 45.0% | |
| TGTGATGAAGTGCGACAATG+TGG | - | tig0019825:97816-97835 | Msa1376600:intron | 45.0% | |
| GTGATGAAGTGCGACAATGT+GGG | - | tig0019825:97817-97836 | Msa1376600:intron | 45.0% | |
| ATTCAATGGCTTCCTGACCA+TGG | - | tig0019825:97898-97917 | Msa1376600:intron | 45.0% | |
| GTGAAGTAGCAGTGTTACAC+AGG | + | tig0019825:98045-98064 | None:intergenic | 45.0% | |
| GTTCAAGACACTGAATGAGG+AGG | + | tig0019825:98190-98209 | None:intergenic | 45.0% | |
| ATACTGCCACAGGGTAAAAC+TGG | + | tig0019825:98266-98285 | None:intergenic | 45.0% | |
| GACCATGCAGATAAGTGCAA+TGG | + | tig0019825:98675-98694 | None:intergenic | 45.0% | |
| TGCACTTATCTGCATGGTCA+AGG | - | tig0019825:98676-98695 | Msa1376600:CDS | 45.0% | |
| GAATTAGTAGGTCCTGACTC+AGG | + | tig0019825:98703-98722 | None:intergenic | 45.0% | |
| TCTCGTTTGGTCCTCTGTAT+AGG | - | tig0019825:99102-99121 | Msa1376600:intron | 45.0% | |
| GTTTGGTCCTCTGTATAGGT+GGG | - | tig0019825:99106-99125 | Msa1376600:intron | 45.0% | |
| AAACTCACCCACCTATACAG+AGG | + | tig0019825:99116-99135 | None:intergenic | 45.0% | |
| CTTCTACAAGGAACAGATGC+TGG | - | tig0019825:99297-99316 | Msa1376600:intron | 45.0% | |
| ! | TTCAGTGTTTATAGCACCGG+TGG | + | tig0019825:99546-99565 | None:intergenic | 45.0% |
| GCCTTTATAACCTAGTGCAG+AGG | - | tig0019825:99608-99627 | Msa1376600:intron | 45.0% | |
| !! | CGAATCTCGTTTTGTTCCCT+TGG | - | tig0019825:99771-99790 | Msa1376600:intron | 45.0% |
| !! | TTTAAAGCGTCGGTTCTAGC+TGG | + | tig0019825:99962-99981 | None:intergenic | 45.0% |
| CTTGGGACCCGAATATGAAA+AGG | - | tig0019825:99994-100013 | Msa1376600:intron | 45.0% | |
| GAAAGCCAGCAATCTGAGAA+TGG | + | tig0019825:100092-100111 | None:intergenic | 45.0% | |
| !! | AGATTGCTGGCTTTCGAAGT+CGG | - | tig0019825:100097-100116 | Msa1376600:intron | 45.0% |
| TGGACCCTCTAGACAATTGA+AGG | + | tig0019825:100275-100294 | None:intergenic | 45.0% | |
| GGTGAAAAAAACGGGAGAGT+GGG | + | tig0019825:100463-100482 | None:intergenic | 45.0% | |
| AGGTGAAAAAAACGGGAGAG+TGG | + | tig0019825:100464-100483 | None:intergenic | 45.0% | |
| TCACCTTAGAGTGGGATGTA+TGG | - | tig0019825:100478-100497 | Msa1376600:intron | 45.0% | |
| ACACCATACATCCCACTCTA+AGG | + | tig0019825:100484-100503 | None:intergenic | 45.0% | |
| GTTGATGTGGCCAAGTTAGT+AGG | - | tig0019825:100703-100722 | Msa1376600:intron | 45.0% | |
| TGCAGGCTAACCTACTAACT+TGG | + | tig0019825:100716-100735 | None:intergenic | 45.0% | |
| !! | GTAGGTTAGCCTGCATTATG+AGG | - | tig0019825:100721-100740 | Msa1376600:intron | 45.0% |
| AGGAAAATTGAGCCTGTGCA+TGG | + | tig0019825:101009-101028 | None:intergenic | 45.0% | |
| ! | TGACCTTTTACCCGCTATCA+GGG | - | tig0019825:101471-101490 | Msa1376600:intron | 45.0% |
| TGCAAAACCGGGCTTGAAAT+TGG | - | tig0019825:101509-101528 | Msa1376600:intron | 45.0% | |
| GATTCCAATGGTTCTCCAAC+CGG | - | tig0019825:101814-101833 | Msa1376600:intron | 45.0% | |
| ATTCCAATGGTTCTCCAACC+GGG | - | tig0019825:101815-101834 | Msa1376600:intron | 45.0% | |
| TCAAGATTATGACTCCCGGT+TGG | + | tig0019825:101832-101851 | None:intergenic | 45.0% | |
| TCTCATGCCATGCTCAAACT+TGG | - | tig0019825:102003-102022 | Msa1376600:intron | 45.0% | |
| AATTCCAAAGCCATCTCCCT+CGG | - | tig0019825:102121-102140 | Msa1376600:intron | 45.0% | |
| CATTGAAGCAGACAAGTTGC+TGG | + | tig0019825:102203-102222 | None:intergenic | 45.0% | |
| CATGCTGCCTAGCAATTGAA+AGG | + | tig0019825:102350-102369 | None:intergenic | 45.0% | |
| AGATCTCTGTGAACAGGACA+AGG | - | tig0019825:102655-102674 | Msa1376600:CDS | 45.0% | |
| AGGAATGACAATTGAGCGGT+AGG | - | tig0019825:102684-102703 | Msa1376600:CDS | 45.0% | |
| ! | AAGGTGCCTATCCCAAACTT+TGG | - | tig0019825:102713-102732 | Msa1376600:intron | 45.0% |
| AGATATCCAGGAACCGAGTA+AGG | + | tig0019825:102742-102761 | None:intergenic | 45.0% | |
| !! | AAAGGTGCTGAGAGATATCC+AGG | + | tig0019825:102754-102773 | None:intergenic | 45.0% |
| AACAACAGGATGGTAAGGGA+AGG | + | tig0019825:102811-102830 | None:intergenic | 45.0% | |
| CTGCAACAACAGGATGGTAA+GGG | + | tig0019825:102815-102834 | None:intergenic | 45.0% | |
| TTTCAGCTGCAACAACAGGA+TGG | + | tig0019825:102821-102840 | None:intergenic | 45.0% | |
| AGATGAGGGTGACAAAGGAA+TGG | + | tig0019825:102856-102875 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGATGA+GGG | + | tig0019825:102870-102889 | None:intergenic | 45.0% | |
| !! | TGTGTTGGTTAGTACACGTG+CGG | + | tig0019825:103052-103071 | None:intergenic | 45.0% |
| GTGAACTTCCACAAACTGCT+AGG | - | tig0019825:103340-103359 | Msa1376600:CDS | 45.0% | |
| ! | CTGGTTGGTTGGAAAAGACT+AGG | + | tig0019825:103376-103395 | None:intergenic | 45.0% |
| GGAATGTGTATGTTAGGTGC+AGG | + | tig0019825:103488-103507 | None:intergenic | 45.0% | |
| TCATAATCCCCATGCTCTTC+AGG | + | tig0019825:103562-103581 | None:intergenic | 45.0% | |
| TCTCTTTACTGGGAACCGAA+AGG | - | tig0019825:103889-103908 | Msa1376600:five_prime_UTR | 45.0% | |
| GCGTCTAGATGCAAGACACA+TGG | - | tig0019825:94418-94437 | Msa1376600:three_prime_UTR | 50.0% | |
| ATTGACAAAGGCGGTGTGGA+CGG | + | tig0019825:94824-94843 | None:intergenic | 50.0% | |
| GCTGAAATAAGAGGGAGAGG+GGG | + | tig0019825:94855-94874 | None:intergenic | 50.0% | |
| !! | TTTTGATTGCGGTGGCGAGA+CGG | + | tig0019825:94906-94925 | None:intergenic | 50.0% |
| TTACGGCCTTCGCAACAGAA+TGG | - | tig0019825:95218-95237 | Msa1376600:intron | 50.0% | |
| GCGACCATTATGACGAGCAA+GGG | + | tig0019825:95304-95323 | None:intergenic | 50.0% | |
| AGCGACCATTATGACGAGCA+AGG | + | tig0019825:95305-95324 | None:intergenic | 50.0% | |
| GCCAGAGAGAATTGGAAGAG+GGG | + | tig0019825:95401-95420 | None:intergenic | 50.0% | |
| CGCCAGAGAGAATTGGAAGA+GGG | + | tig0019825:95402-95421 | None:intergenic | 50.0% | |
| ACGCCAGAGAGAATTGGAAG+AGG | + | tig0019825:95403-95422 | None:intergenic | 50.0% | |
| TCCAATTCTCTCTGGCGTAC+TGG | - | tig0019825:95405-95424 | Msa1376600:intron | 50.0% | |
| ACCAGTACGCCAGAGAGAAT+TGG | + | tig0019825:95409-95428 | None:intergenic | 50.0% | |
| AATTCTCTCTGGCGTACTGG+TGG | - | tig0019825:95408-95427 | Msa1376600:intron | 50.0% | |
| CTTCTTGGGACTGTTGCTGT+TGG | + | tig0019825:95442-95461 | None:intergenic | 50.0% | |
| ACAATGACGATGCAATCGGG+AGG | + | tig0019825:95507-95526 | None:intergenic | 50.0% | |
| ! | ATGCGGCTGAAAGTATGGAG+AGG | + | tig0019825:95612-95631 | None:intergenic | 50.0% |
| ACAACAAGCTGCCAAGGAGA+AGG | - | tig0019825:95764-95783 | Msa1376600:intron | 50.0% | |
| GGTGTACTACTACCTTGAGG+GGG | + | tig0019825:95855-95874 | None:intergenic | 50.0% | |
| GCTTCCGTACTTGGAGTTGA+GGG | + | tig0019825:96401-96420 | None:intergenic | 50.0% | |
| TCAACTCCAAGTACGGAAGC+CGG | - | tig0019825:96401-96420 | Msa1376600:intron | 50.0% | |
| GCAACAGCTAGGCCATATGA+AGG | + | tig0019825:96911-96930 | None:intergenic | 50.0% | |
| CGTTTGGTCCTCTGTATAGG+TGG | - | tig0019825:99105-99124 | Msa1376600:intron | 50.0% | |
| TTGAAAGGGTTACTGCTCCC+AGG | - | tig0019825:99254-99273 | Msa1376600:intron | 50.0% | |
| ACAAGGAACAGATGCTGGAC+CGG | - | tig0019825:99302-99321 | Msa1376600:intron | 50.0% | |
| CAACCCCACGATACTTGGAA+TGG | + | tig0019825:100130-100149 | None:intergenic | 50.0% | |
| ! | CATTCCAAGTATCGTGGGGT+TGG | - | tig0019825:100128-100147 | Msa1376600:intron | 50.0% |
| CTATCCAACCCCACGATACT+TGG | + | tig0019825:100135-100154 | None:intergenic | 50.0% | |
| TCTGTTAGTCGTGACTCGTG+AGG | - | tig0019825:100224-100243 | Msa1376600:intron | 50.0% | |
| CATACAGGCAATACCCCAAG+TGG | + | tig0019825:100336-100355 | None:intergenic | 50.0% | |
| GGTATGACTGCATGTCTGTG+AGG | - | tig0019825:100785-100804 | Msa1376600:intron | 50.0% | |
| TGCATGTCTGTGAGGAACCT+TGG | - | tig0019825:100793-100812 | Msa1376600:intron | 50.0% | |
| TGAGGAACCTTGGTCCTTGT+AGG | - | tig0019825:100803-100822 | Msa1376600:intron | 50.0% | |
| GCAAAACATGGACCATGCAC+AGG | - | tig0019825:100994-101013 | Msa1376600:intron | 50.0% | |
| ACCACTGCCTGAAAGACCTA+TGG | - | tig0019825:101425-101444 | Msa1376600:intron | 50.0% | |
| TCCATAGGTCTTTCAGGCAG+TGG | + | tig0019825:101429-101448 | None:intergenic | 50.0% | |
| !! | CTGATAGCGGGTAAAAGGTC+AGG | + | tig0019825:101472-101491 | None:intergenic | 50.0% |
| ! | CTGACCTTTTACCCGCTATC+AGG | - | tig0019825:101470-101489 | Msa1376600:intron | 50.0% |
| ! | GACCTTTTACCCGCTATCAG+GGG | - | tig0019825:101472-101491 | Msa1376600:intron | 50.0% |
| CTTTGTACCCTCCTTTCTGC+TGG | - | tig0019825:101868-101887 | Msa1376600:intron | 50.0% | |
| TCAGAGTCCAGCAGAAAGGA+GGG | + | tig0019825:101878-101897 | None:intergenic | 50.0% | |
| TTCAGAGTCCAGCAGAAAGG+AGG | + | tig0019825:101879-101898 | None:intergenic | 50.0% | |
| TTACGATCGAACCCTGTGTG+AGG | - | tig0019825:101925-101944 | Msa1376600:CDS | 50.0% | |
| TACGATCGAACCCTGTGTGA+GGG | - | tig0019825:101926-101945 | Msa1376600:CDS | 50.0% | |
| TTGGGTCTAACCCTCACACA+GGG | + | tig0019825:101939-101958 | None:intergenic | 50.0% | |
| TTTGGGTCTAACCCTCACAC+AGG | + | tig0019825:101940-101959 | None:intergenic | 50.0% | |
| CAGAGTGATGCACCGTTAGA+GGG | + | tig0019825:102054-102073 | None:intergenic | 50.0% | |
| ACAGAGTGATGCACCGTTAG+AGG | + | tig0019825:102055-102074 | None:intergenic | 50.0% | |
| TAACGGTGCATCACTCTGTC+AGG | - | tig0019825:102056-102075 | Msa1376600:intron | 50.0% | |
| AACGGTGCATCACTCTGTCA+GGG | - | tig0019825:102057-102076 | Msa1376600:CDS | 50.0% | |
| !! | AAAGGAAGTATCAGGGCCGA+GGG | + | tig0019825:102140-102159 | None:intergenic | 50.0% |
| !! | TAAAGGAAGTATCAGGGCCG+AGG | + | tig0019825:102141-102160 | None:intergenic | 50.0% |
| TGAAGCAGACAAGTTGCTGG+AGG | + | tig0019825:102200-102219 | None:intergenic | 50.0% | |
| ! | ATTGAGGGTGCGTTTGTTCC+CGG | + | tig0019825:102323-102342 | None:intergenic | 50.0% |
| ! | GCTGCATTGGTAGCTTAAGC+TGG | - | tig0019825:102388-102407 | Msa1376600:intron | 50.0% |
| ACTGTTGCATAGTGCCCTTG+TGG | + | tig0019825:102498-102517 | None:intergenic | 50.0% | |
| TGGAAACCTTACTCGGTTCC+TGG | - | tig0019825:102733-102752 | Msa1376600:intron | 50.0% | |
| GGTAAGGGAAGGATCACTGA+TGG | + | tig0019825:102800-102819 | None:intergenic | 50.0% | |
| GCTGCAACAACAGGATGGTA+AGG | + | tig0019825:102816-102835 | None:intergenic | 50.0% | |
| ! | GGGTTTTCAGCTGCAACAAC+AGG | + | tig0019825:102825-102844 | None:intergenic | 50.0% |
| GAGAGAGATGAGGGTGACAA+AGG | + | tig0019825:102861-102880 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGATG+AGG | + | tig0019825:102871-102890 | None:intergenic | 50.0% | |
| CCTTGTCTCCTAGCAGTTTG+TGG | + | tig0019825:103351-103370 | None:intergenic | 50.0% | |
| CCACAAACTGCTAGGAGACA+AGG | - | tig0019825:103348-103367 | Msa1376600:CDS | 50.0% | |
| ATAGAGTAAGGGAGAGCAGG+TGG | + | tig0019825:103423-103442 | None:intergenic | 50.0% | |
| AGGTGCAGGCTCGATAGAAA+TGG | + | tig0019825:103474-103493 | None:intergenic | 50.0% | |
| CTTCAGGTCAGCATGCTGAA+AGG | + | tig0019825:103546-103565 | None:intergenic | 50.0% | |
| ! | CATGCTGACCTGAAGAGCAT+GGG | - | tig0019825:103551-103570 | Msa1376600:exon | 50.0% |
| ! | ATGCTGACCTGAAGAGCATG+GGG | - | tig0019825:103552-103571 | Msa1376600:exon | 50.0% |
| ! | GCACGGCAAATCAAAGCATC+TGG | + | tig0019825:103835-103854 | None:intergenic | 50.0% |
| ! | CTGTACAACGAGTTGGAGCA+CGG | - | tig0019825:104094-104113 | Msa1376600:intron | 50.0% |
| GCAACAGTGGTCACGCATAG+AGG | + | tig0019825:94771-94790 | None:intergenic | 55.0% | |
| TGCGATTGACAAAGGCGGTG+TGG | + | tig0019825:94828-94847 | None:intergenic | 55.0% | |
| GACGCTGCGATTGACAAAGG+CGG | + | tig0019825:94833-94852 | None:intergenic | 55.0% | |
| GCCCCTCTTCCAATTCTCTC+TGG | - | tig0019825:95397-95416 | Msa1376600:intron | 55.0% | |
| ATGCAATCGGGAGGCTGAGT+AGG | + | tig0019825:95498-95517 | None:intergenic | 55.0% | |
| GAGGGAACAACAAGCTGCCA+AGG | - | tig0019825:95758-95777 | Msa1376600:intron | 55.0% | |
| ATATCACCCTTGCCCCCTCA+AGG | - | tig0019825:95840-95859 | Msa1376600:intron | 55.0% | |
| CTACTACCTTGAGGGGGCAA+GGG | + | tig0019825:95849-95868 | None:intergenic | 55.0% | |
| ACTACTACCTTGAGGGGGCA+AGG | + | tig0019825:95850-95869 | None:intergenic | 55.0% | |
| GGCTTCCGTACTTGGAGTTG+AGG | + | tig0019825:96402-96421 | None:intergenic | 55.0% | |
| CAACTCCAAGTACGGAAGCC+GGG | - | tig0019825:96402-96421 | Msa1376600:intron | 55.0% | |
| AGCTACTGCTGGCAACAGCT+AGG | + | tig0019825:96922-96941 | None:intergenic | 55.0% | |
| !! | GAGGTGCCAGTTTTACCCTG+TGG | - | tig0019825:98257-98276 | Msa1376600:intron | 55.0% |
| CATGGTCAAGGTCCTGAGTC+AGG | - | tig0019825:98688-98707 | Msa1376600:CDS | 55.0% | |
| !! | CCTTTGAGATTGGGGGCATC+TGG | + | tig0019825:99181-99200 | None:intergenic | 55.0% |
| CCAGATGCCCCCAATCTCAA+AGG | - | tig0019825:99178-99197 | Msa1376600:intron | 55.0% | |
| AAAGGGTTACTGCTCCCAGG+AGG | - | tig0019825:99257-99276 | Msa1376600:intron | 55.0% | |
| TCGGGTCCCAAGTCTATCAC+AGG | + | tig0019825:99986-100005 | None:intergenic | 55.0% | |
| TGATTGTGAGAGGCGACGTG+TGG | - | tig0019825:100157-100176 | Msa1376600:intron | 55.0% | |
| TGAGAGGCGACGTGTGGTTT+GGG | - | tig0019825:100163-100182 | Msa1376600:intron | 55.0% | |
| AACGGGAGAGTGGGCATATG+AGG | + | tig0019825:100454-100473 | None:intergenic | 55.0% | |
| ! | GCCTGCATTATGAGGGTGTG+AGG | - | tig0019825:100729-100748 | Msa1376600:intron | 55.0% |
| GCCTCACACCCTCATAATGC+AGG | + | tig0019825:100733-100752 | None:intergenic | 55.0% | |
| !! | TGCCCCTGATAGCGGGTAAA+AGG | + | tig0019825:101477-101496 | None:intergenic | 55.0% |
| TAGTCACGTGCCCCTGATAG+CGG | + | tig0019825:101485-101504 | None:intergenic | 55.0% | |
| ACTCCCGGTTGGAGAACCAT+TGG | + | tig0019825:101821-101840 | None:intergenic | 55.0% | |
| ! | GAGCATGGCATGAGAGCATG+AGG | + | tig0019825:101998-102017 | None:intergenic | 55.0% |
| ACGGTGCATCACTCTGTCAG+GGG | - | tig0019825:102058-102077 | Msa1376600:CDS | 55.0% | |
| TGCATCACTCTGTCAGGGGT+AGG | - | tig0019825:102062-102081 | Msa1376600:CDS | 55.0% | |
| GGGAAGGATCACTGATGGCT+TGG | + | tig0019825:102795-102814 | None:intergenic | 55.0% | |
| GTTGGTTAGTACACGTGCGG+TGG | + | tig0019825:103049-103068 | None:intergenic | 55.0% | |
| !! | GGATGCTTTGGGGAAGACGA+CGG | + | tig0019825:103123-103142 | None:intergenic | 55.0% |
| GAAGACATCAAGCTGCTGCC+AGG | - | tig0019825:103153-103172 | Msa1376600:CDS | 55.0% | |
| AAGGGAGAGCAGGTGGCATT+CGG | + | tig0019825:103416-103435 | None:intergenic | 55.0% | |
| GCATGCTGACCTGAAGAGCA+TGG | - | tig0019825:103550-103569 | Msa1376600:exon | 55.0% | |
| GGCGGCGTGATCAGAGAAAG+AGG | + | tig0019825:94793-94812 | None:intergenic | 60.0% | |
| GGGGACGCTGCGATTGACAA+AGG | + | tig0019825:94836-94855 | None:intergenic | 60.0% | |
| TGGAACCCGGCTTCCGTACT+TGG | + | tig0019825:96410-96429 | None:intergenic | 60.0% | |
| AGATGCTGGACCGGCAGTAC+AGG | - | tig0019825:99311-99330 | Msa1376600:intron | 60.0% | |
| GTGAGAGGCGACGTGTGGTT+TGG | - | tig0019825:100162-100181 | Msa1376600:intron | 60.0% | |
| GAGAGGCGACGTGTGGTTTG+GGG | - | tig0019825:100164-100183 | Msa1376600:intron | 60.0% | |
| AGTCACGTGCCCCTGATAGC+GGG | + | tig0019825:101484-101503 | None:intergenic | 60.0% | |
| AGTATCAGGGCCGAGGGAGA+TGG | + | tig0019825:102134-102153 | None:intergenic | 60.0% | |
| !! | TGCTTTGGGGAAGACGACGG+TGG | + | tig0019825:103120-103139 | None:intergenic | 60.0% |
| GTGTGGACGGAGGTTGACGG+CGG | + | tig0019825:94811-94830 | None:intergenic | 65.0% | |
| GCGGTGTGGACGGAGGTTGA+CGG | + | tig0019825:94814-94833 | None:intergenic | 65.0% | |
| GACAAAGGCGGTGTGGACGG+AGG | + | tig0019825:94821-94840 | None:intergenic | 65.0% | |
| AGGGCCGAGGGAGATGGCTT+TGG | + | tig0019825:102128-102147 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019825 | gene | 94404 | 104274 | 94404 | ID=Msa1376600;Name=Msa1376600 |
| tig0019825 | mRNA | 94404 | 104274 | 94404 | ID=Msa1376600-mRNA-1;Parent=Msa1376600;Name=Msa1376600-mRNA-1;_AED=0.07;_eAED=0.07;_QI=367|1|1|1|0.9|0.85|21|491|631 |
| tig0019825 | exon | 94404 | 94927 | 94404 | ID=Msa1376600-mRNA-1:exon:5250;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 97115 | 97186 | 97115 | ID=Msa1376600-mRNA-1:exon:5249;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 98475 | 98579 | 98475 | ID=Msa1376600-mRNA-1:exon:5248;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 98663 | 98761 | 98663 | ID=Msa1376600-mRNA-1:exon:5247;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 98856 | 98939 | 98856 | ID=Msa1376600-mRNA-1:exon:5246;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 99346 | 99402 | 99346 | ID=Msa1376600-mRNA-1:exon:5245;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 99479 | 99554 | 99479 | ID=Msa1376600-mRNA-1:exon:5244;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 99637 | 99674 | 99637 | ID=Msa1376600-mRNA-1:exon:5243;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 99831 | 99863 | 99831 | ID=Msa1376600-mRNA-1:exon:5242;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 100507 | 100557 | 100507 | ID=Msa1376600-mRNA-1:exon:5241;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 100661 | 100707 | 100661 | ID=Msa1376600-mRNA-1:exon:5240;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 100822 | 100879 | 100822 | ID=Msa1376600-mRNA-1:exon:5239;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 101079 | 101151 | 101079 | ID=Msa1376600-mRNA-1:exon:5238;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 101918 | 101970 | 101918 | ID=Msa1376600-mRNA-1:exon:5237;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 102057 | 102107 | 102057 | ID=Msa1376600-mRNA-1:exon:5236;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 102204 | 102281 | 102204 | ID=Msa1376600-mRNA-1:exon:5235;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 102488 | 102548 | 102488 | ID=Msa1376600-mRNA-1:exon:5234;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 102641 | 102731 | 102641 | ID=Msa1376600-mRNA-1:exon:5233;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 102817 | 103584 | 102817 | ID=Msa1376600-mRNA-1:exon:5232;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 103678 | 103938 | 103678 | ID=Msa1376600-mRNA-1:exon:5231;Parent=Msa1376600-mRNA-1 |
| tig0019825 | exon | 104201 | 104274 | 104201 | ID=Msa1376600-mRNA-1:exon:5230;Parent=Msa1376600-mRNA-1 |
| tig0019825 | five_prime_UTR | 104201 | 104274 | 104201 | ID=Msa1376600-mRNA-1:five_prime_utr;Parent=Msa1376600-mRNA-1 |
| tig0019825 | five_prime_UTR | 103678 | 103938 | 103678 | ID=Msa1376600-mRNA-1:five_prime_utr;Parent=Msa1376600-mRNA-1 |
| tig0019825 | five_prime_UTR | 103553 | 103584 | 103553 | ID=Msa1376600-mRNA-1:five_prime_utr;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 102817 | 103552 | 102817 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 102641 | 102731 | 102641 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 102488 | 102548 | 102488 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 102204 | 102281 | 102204 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 102057 | 102107 | 102057 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 101918 | 101970 | 101918 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 101079 | 101151 | 101079 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 100822 | 100879 | 100822 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 100661 | 100707 | 100661 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 100507 | 100557 | 100507 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 99831 | 99863 | 99831 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 99637 | 99674 | 99637 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 99479 | 99554 | 99479 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 99346 | 99402 | 99346 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 98856 | 98939 | 98856 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 98663 | 98761 | 98663 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 98475 | 98579 | 98475 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 97115 | 97186 | 97115 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | CDS | 94895 | 94927 | 94895 | ID=Msa1376600-mRNA-1:cds;Parent=Msa1376600-mRNA-1 |
| tig0019825 | three_prime_UTR | 94404 | 94894 | 94404 | ID=Msa1376600-mRNA-1:three_prime_utr;Parent=Msa1376600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
