Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382540 | AES89389.2 | 80.155 | 645 | 100 | 11 | 1 | 632 | 1 | 630 | 0.0 | 892 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382540 | sp|O74828|ESF1_SCHPO | 31.619 | 661 | 339 | 22 | 20 | 588 | 19 | 658 | 2.34e-69 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382540 | G7JNE8 | 80.155 | 645 | 100 | 11 | 1 | 632 | 1 | 630 | 0.0 | 892 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0382540 | Msa0525220 | 0.935688 | 5.718461e-97 | -8.615850e-47 |
| Msa0382540 | Msa0989360 | 0.816325 | 5.861414e-52 | -8.615850e-47 |
| Msa0382540 | Msa1001180 | 0.807745 | 4.350520e-50 | -8.615850e-47 |
| Msa0382540 | Msa1075650 | 0.800995 | 1.109353e-48 | -8.615850e-47 |
| Msa0382540 | Msa1429850 | 0.898036 | 7.860641e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382540 | MtrunA17_Chr4g0052231 | 52.074 | 699 | 252 | 22 | 18 | 646 | 47 | 732 | 1.14e-175 | 518 |
| Msa0382540 | MtrunA17_Chr4g0037051 | 80.236 | 339 | 53 | 6 | 1 | 332 | 1 | 332 | 1.18e-167 | 485 |
| Msa0382540 | MtrunA17_Chr4g0037061 | 70.538 | 353 | 59 | 7 | 330 | 647 | 12 | 354 | 5.80e-133 | 395 |
| Msa0382540 | MtrunA17_Chr3g0137811 | 86.207 | 116 | 11 | 2 | 522 | 632 | 1 | 116 | 4.64e-60 | 197 |
| Msa0382540 | MtrunA17_Chr3g0137801 | 89.516 | 124 | 13 | 0 | 366 | 489 | 1 | 124 | 1.03e-59 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382540 | AT3G01160.1 | 42.544 | 684 | 284 | 22 | 20 | 628 | 30 | 679 | 2.31e-133 | 409 |
Find 113 sgRNAs with CRISPR-Local
Find 480 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTAGTCCACTTGATTTA+AGG | 0.103671 | 3_1:+85169046 | Msa0382540:CDS |
| TATCTTAGTTTGGTCTATTC+AGG | 0.231031 | 3_1:+85172796 | Msa0382540:CDS |
| CCTTGTCTGACCATCTTGAT+TGG | 0.265105 | 3_1:-85174022 | None:intergenic |
| TAAGGTTTATTCCTGACATT+TGG | 0.265200 | 3_1:+85169064 | Msa0382540:CDS |
| AGAAGAAGAAGAAGGAGAAC+AGG | 0.271293 | 3_1:+85167791 | Msa0382540:CDS |
| AACTACGTAGTCAAAGATTT+TGG | 0.274407 | 3_1:+85169207 | Msa0382540:CDS |
| GCTGTCTATCCAACTGAGTT+TGG | 0.281054 | 3_1:+85168240 | Msa0382540:CDS |
| CTACCAATCCACAATTTAAA+AGG | 0.288495 | 3_1:+85173370 | Msa0382540:CDS |
| CTGTCTATCCAACTGAGTTT+GGG | 0.310560 | 3_1:+85168241 | Msa0382540:CDS |
| AAAAGACATTTGCATTACTT+TGG | 0.325778 | 3_1:-85173886 | None:intergenic |
| AGAAGGAGAACAGGGATTGA+TGG | 0.333327 | 3_1:+85167800 | Msa0382540:CDS |
| ACAAGATATGTATCTTAGTT+TGG | 0.334345 | 3_1:+85172786 | Msa0382540:CDS |
| ATGGAGGTGACCTTCCATTC+AGG | 0.349398 | 3_1:+85172862 | Msa0382540:CDS |
| AAAGACATTTGCATTACTTT+GGG | 0.354034 | 3_1:-85173885 | None:intergenic |
| CTTCTTCTACTTTGTAGTAA+TGG | 0.364768 | 3_1:-85167755 | None:intergenic |
| AAACAGTTTGGGAAGCATTT+CGG | 0.373490 | 3_1:+85172935 | Msa0382540:CDS |
| ATAAAAGATCAGAAACAGTT+TGG | 0.382446 | 3_1:+85172923 | Msa0382540:CDS |
| AAGGTTTATTCCTGACATTT+GGG | 0.408401 | 3_1:+85169065 | Msa0382540:CDS |
| GCTTTAATAGCTTGCTCAGT+TGG | 0.409614 | 3_1:+85172678 | Msa0382540:intron |
| CCGCATCCTGCTCTTCTGAT+AGG | 0.410075 | 3_1:-85168358 | None:intergenic |
| TGACATTTGGGAATTCAAAC+AGG | 0.431467 | 3_1:+85169077 | Msa0382540:CDS |
| GGGAAGCATTTCGGAGGAAA+AGG | 0.439702 | 3_1:+85172944 | Msa0382540:CDS |
| TAAAAGATCAGAAACAGTTT+GGG | 0.450088 | 3_1:+85172924 | Msa0382540:CDS |
| AAGAAAATTTACTGATGAGC+AGG | 0.451778 | 3_1:+85169305 | Msa0382540:CDS |
| ATTTGATCATTCCATTCGTT+GGG | 0.460852 | 3_1:-85168212 | None:intergenic |
| TCATCACTATATGTACTGTT+TGG | 0.467432 | 3_1:-85173300 | None:intergenic |
| GAAGGATAAGAAAGAAGGAT+TGG | 0.467803 | 3_1:+85173923 | Msa0382540:CDS |
| GTTGGAATGGAAAGAATACT+TGG | 0.472915 | 3_1:+85172696 | Msa0382540:CDS |
| TACTGACACGCTTGATATGC+AGG | 0.477038 | 3_1:+85167899 | Msa0382540:CDS |
| AGTTTGGTCTATTCAGGCAA+TGG | 0.477065 | 3_1:+85172802 | Msa0382540:CDS |
| TCAGAAGTGCTGCATATGTC+AGG | 0.485957 | 3_1:+85173817 | Msa0382540:intron |
| ATGATGATCCCTTTCGCAAA+AGG | 0.486579 | 3_1:+85169274 | Msa0382540:CDS |
| TGTTTGAATTCCCAAATGTC+AGG | 0.487735 | 3_1:-85169075 | None:intergenic |
| GGAAGGTCACCTCCATCTCT+TGG | 0.492100 | 3_1:-85172855 | None:intergenic |
| AATTCATTTGTCCCAACGAA+TGG | 0.492101 | 3_1:+85168201 | Msa0382540:CDS |
| TTCTTCCTCTTCTTAGCACA+AGG | 0.493874 | 3_1:-85173069 | None:intergenic |
| GATTTGATCATTCCATTCGT+TGG | 0.497978 | 3_1:-85168213 | None:intergenic |
| TTAGACATTCCAATCCTGAA+TGG | 0.500488 | 3_1:-85172876 | None:intergenic |
| AATAGCTTGCTCAGTTGGAA+TGG | 0.502815 | 3_1:+85172683 | Msa0382540:intron |
| GGGAATTCAAACAGGAGCCT+AGG | 0.504845 | 3_1:+85169085 | Msa0382540:CDS |
| GATGACAAGAGGATAGAAAC+TGG | 0.506109 | 3_1:+85173195 | Msa0382540:CDS |
| TGCGTGCCTATCAGAAGAGC+AGG | 0.506500 | 3_1:+85168352 | Msa0382540:CDS |
| GTAGGATCAATAGCATAGTC+AGG | 0.510491 | 3_1:-85173351 | None:intergenic |
| GATGGTCAGACAAGGAAAGA+TGG | 0.511671 | 3_1:+85174030 | Msa0382540:CDS |
| GGTGACCTTCCATTCAGGAT+TGG | 0.516982 | 3_1:+85172867 | Msa0382540:CDS |
| TGATTGAGAAAGATACTCAT+AGG | 0.520942 | 3_1:+85168043 | Msa0382540:CDS |
| ACACAAGCAGAAGGGTCAAA+TGG | 0.522132 | 3_1:+85173851 | Msa0382540:CDS |
| ACATAATAACCTCCAACGTA+TGG | 0.523245 | 3_1:+85173119 | Msa0382540:CDS |
| GAGGATAGAAACTGGTCTCA+AGG | 0.527889 | 3_1:+85173203 | Msa0382540:CDS |
| GGCCTGCCTCTCTTGTCGAT+TGG | 0.527987 | 3_1:-85167693 | None:intergenic |
| GCAGCTAGCACACAAGCAGA+AGG | 0.534408 | 3_1:+85173842 | Msa0382540:CDS |
| CACATTTACAAAGAATGTAA+TGG | 0.534661 | 3_1:+85169012 | Msa0382540:CDS |
| AACGAATGGAATGATCAAAT+CGG | 0.535386 | 3_1:+85168215 | Msa0382540:CDS |
| ATGCAGAAGGATAAGAAAGA+AGG | 0.537357 | 3_1:+85173918 | Msa0382540:CDS |
| AGAGGGAAGTGAAAGAGTGA+AGG | 0.537368 | 3_1:+85174687 | Msa0382540:CDS |
| ACATATTTGGTATGAAATCG+TGG | 0.538508 | 3_1:+85167487 | None:intergenic |
| AGCAGATGAATTCTTCATTG+AGG | 0.539702 | 3_1:+85173044 | Msa0382540:CDS |
| TTTGTAAATGTGAGCTGCTG+TGG | 0.539886 | 3_1:-85169001 | None:intergenic |
| TGGGCTTCAACGTATGAAAG+AGG | 0.540071 | 3_1:+85168260 | Msa0382540:CDS |
| CACCAATCGACAAGAGAGGC+AGG | 0.541791 | 3_1:+85167691 | Msa0382540:CDS |
| TAACAGTGAGACTGATGATC+AGG | 0.542635 | 3_1:+85172744 | Msa0382540:CDS |
| GGAGAATGTTATTATTGATG+AGG | 0.542911 | 3_1:+85173269 | Msa0382540:CDS |
| AGGAGAACAGGGATTGATGG+AGG | 0.543376 | 3_1:+85167803 | Msa0382540:CDS |
| CGTTGAAGCCCAAACTCAGT+TGG | 0.548103 | 3_1:-85168249 | None:intergenic |
| GGAATAAACCTTAAATCAAG+TGG | 0.549824 | 3_1:-85169054 | None:intergenic |
| TGATGATCAGGTTGATGAGA+AGG | 0.554035 | 3_1:+85172756 | Msa0382540:CDS |
| AGGATAGAAACTGGTCTCAA+GGG | 0.554727 | 3_1:+85173204 | Msa0382540:CDS |
| TGAGAAAGATACTCATAGGC+TGG | 0.559647 | 3_1:+85168047 | Msa0382540:CDS |
| GAGAATGTTATTATTGATGA+GGG | 0.560141 | 3_1:+85173270 | Msa0382540:CDS |
| TAGGCTGGCTGTTGTCAACA+TGG | 0.560464 | 3_1:+85168062 | Msa0382540:CDS |
| GGAATTCAAACAGGAGCCTA+GGG | 0.560571 | 3_1:+85169086 | Msa0382540:CDS |
| TGGCTGTTGTCAACATGGAC+TGG | 0.565171 | 3_1:+85168067 | Msa0382540:CDS |
| GAAGAAGAAGAAGGAGAACA+GGG | 0.570380 | 3_1:+85167792 | Msa0382540:CDS |
| CAGGTTCTATCATGCTGTGG+TGG | 0.572382 | 3_1:+85168963 | Msa0382540:intron |
| AAGGAAGGACAAAATGGGGA+AGG | 0.573640 | 3_1:+85173248 | Msa0382540:CDS |
| AGGAACCTTGTGCTAAGAAG+AGG | 0.574343 | 3_1:+85173064 | Msa0382540:CDS |
| ACATGACGTTGGCCAAGAGA+TGG | 0.575828 | 3_1:+85172843 | Msa0382540:CDS |
| CAAAGCAGATCCAATCAAGA+TGG | 0.576704 | 3_1:+85174012 | Msa0382540:CDS |
| ACATTCCAATCCTGAATGGA+AGG | 0.577659 | 3_1:-85172872 | None:intergenic |
| AGATGGAAATCAAAATTTGA+AGG | 0.579525 | 3_1:+85174047 | Msa0382540:CDS |
| TTTAGAGCCTCTCGAAAACG+AGG | 0.584508 | 3_1:-85167594 | None:intergenic |
| TCAGACTGAGAGGAGAGGAA+TGG | 0.587594 | 3_1:+85174711 | Msa0382540:CDS |
| GCCTAGGGATGTTGTGACAA+AGG | 0.591762 | 3_1:+85169101 | Msa0382540:CDS |
| GAAAATCAGATTTCAAAGTG+AGG | 0.592350 | 3_1:-85167728 | None:intergenic |
| TCTTTGACTACGTAGTTCGC+AGG | 0.593079 | 3_1:-85169201 | None:intergenic |
| CAACCATGTCCATACGTTGG+AGG | 0.593698 | 3_1:-85173128 | None:intergenic |
| ACCTTTGTCACAACATCCCT+AGG | 0.596897 | 3_1:-85169102 | None:intergenic |
| CTGCAGGTTCTATCATGCTG+TGG | 0.598849 | 3_1:+85168960 | Msa0382540:intron |
| CAGTTTGGGAAGCATTTCGG+AGG | 0.599530 | 3_1:+85172938 | Msa0382540:CDS |
| CAGCTAGCACACAAGCAGAA+GGG | 0.600301 | 3_1:+85173843 | Msa0382540:CDS |
| TATTGCTTGCTGATGACAAG+AGG | 0.600984 | 3_1:+85173184 | Msa0382540:CDS |
| AAAAGAAGCGCAACAAAACG+TGG | 0.602912 | 3_1:-85173324 | None:intergenic |
| GGCTCTAAAGAATGAAACAA+AGG | 0.605109 | 3_1:+85167608 | Msa0382540:CDS |
| CCAATCAAGATGGTCAGACA+AGG | 0.606384 | 3_1:+85174022 | Msa0382540:CDS |
| CATATTTGGTATGAAATCGT+GGG | 0.616683 | 3_1:+85167488 | None:intergenic |
| CCTATCAGAAGAGCAGGATG+CGG | 0.628504 | 3_1:+85168358 | Msa0382540:CDS |
| AGTCAAATGGAACAAATCCA+CGG | 0.635400 | 3_1:-85168290 | None:intergenic |
| GAGTGAAGGATCAGACTGAG+AGG | 0.639540 | 3_1:+85174701 | Msa0382540:CDS |
| TGACGTTGGCCAAGAGATGG+AGG | 0.643765 | 3_1:+85172846 | Msa0382540:CDS |
| ATGAAAGAGGAGAATAGCCG+TGG | 0.646240 | 3_1:+85168273 | Msa0382540:CDS |
| CAGCAACCATGTCCATACGT+TGG | 0.651119 | 3_1:-85173131 | None:intergenic |
| AAGGATCAGACTGAGAGGAG+AGG | 0.654484 | 3_1:+85174706 | Msa0382540:CDS |
| TAACCTCCAACGTATGGACA+TGG | 0.658301 | 3_1:+85173125 | Msa0382540:CDS |
| TATAAATTAGGAACTCGAAG+AGG | 0.658700 | 3_1:+85168014 | Msa0382540:intron |
| GAACACTGCATACAAGTCAA+CGG | 0.660177 | 3_1:-85168178 | None:intergenic |
| TCTAAAGAATGAAACAAAGG+TGG | 0.660637 | 3_1:+85167611 | Msa0382540:CDS |
| TTACTGTGCTGAAGTACTCG+AGG | 0.668752 | 3_1:-85169231 | None:intergenic |
| TTAGAGCCTCTCGAAAACGA+GGG | 0.685733 | 3_1:-85167593 | None:intergenic |
| AGAAGAGGAAGAAAGCACAA+AGG | 0.691103 | 3_1:+85173079 | Msa0382540:CDS |
| TCTGCACCAATCGACAAGAG+AGG | 0.697200 | 3_1:+85167687 | Msa0382540:CDS |
| GAAGATGCTGAACATGACGT+TGG | 0.698393 | 3_1:+85172832 | Msa0382540:CDS |
| GTGTGCACTCCTACAAAACG+AGG | 0.707117 | 3_1:-85167567 | None:intergenic |
| CATGGACTGGAACTATGTGA+AGG | 0.756163 | 3_1:+85168080 | Msa0382540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAAAAAAAAAAA+AGG | - | chr3_1:85170154-85170173 | None:intergenic | 0.0% |
| !!! | ATAATTTTTTTTATAAAAAA+TGG | + | chr3_1:85174560-85174579 | Msa0382540:intron | 0.0% |
| !! | AAATCCTAATATTTATTATT+AGG | + | chr3_1:85170251-85170270 | Msa0382540:intron | 10.0% |
| !! | TAATCCTAATAATAAATATT+AGG | - | chr3_1:85170258-85170277 | None:intergenic | 10.0% |
| !!! | TAAAAAAATTTGTTTATTAG+TGG | + | chr3_1:85171726-85171745 | Msa0382540:intron | 10.0% |
| !! | ATGTCTAAATAAAAAATTAA+TGG | + | chr3_1:85172891-85172910 | Msa0382540:CDS | 10.0% |
| !! | TTAATAATCAATTAAAAGTT+TGG | - | chr3_1:85173461-85173480 | None:intergenic | 10.0% |
| !! | TTTAAATATTGAAAATGAAA+TGG | + | chr3_1:85174359-85174378 | Msa0382540:intron | 10.0% |
| !! | TTAAATATTGAAAATGAAAT+GGG | + | chr3_1:85174360-85174379 | Msa0382540:intron | 10.0% |
| !!! | TAATTTTTTTTATAGACATA+TGG | + | chr3_1:85174456-85174475 | Msa0382540:intron | 10.0% |
| !!! | TTTTGTTGTTGTTATAAATT+AGG | + | chr3_1:85168002-85168021 | Msa0382540:intron | 15.0% |
| !!! | ATCATTTTGTTTTTTGTTAT+AGG | + | chr3_1:85168155-85168174 | Msa0382540:intron | 15.0% |
| !! | TTATGTTGTATGATAATAAT+TGG | + | chr3_1:85169148-85169167 | Msa0382540:intron | 15.0% |
| !! | TGGATAACATAAAAAAAAAA+TGG | + | chr3_1:85169359-85169378 | Msa0382540:intron | 15.0% |
| !!! | TTTTCAAATTTTTTAAGCTA+TGG | - | chr3_1:85171000-85171019 | None:intergenic | 15.0% |
| !! | ATAATGATTGACAAAATTAT+TGG | - | chr3_1:85171651-85171670 | None:intergenic | 15.0% |
| !!! | AATAATTTTGTCAATCATTA+TGG | + | chr3_1:85171650-85171669 | Msa0382540:intron | 15.0% |
| !! | TTATGTTTAACATAATATAG+TGG | - | chr3_1:85171998-85172017 | None:intergenic | 15.0% |
| !! | ATATTATGTTAAACATAACA+AGG | + | chr3_1:85172000-85172019 | Msa0382540:intron | 15.0% |
| !! | TTGAAATTTATCCATTAAAT+TGG | - | chr3_1:85172224-85172243 | None:intergenic | 15.0% |
| !! | AATGGATAAATTTCAAAATT+AGG | + | chr3_1:85172228-85172247 | Msa0382540:intron | 15.0% |
| !! | TAAAAAATTAATGGAAAAGA+AGG | + | chr3_1:85172900-85172919 | Msa0382540:CDS | 15.0% |
| !!! | ATACTTCAATTTATTTTTGT+TGG | - | chr3_1:85172986-85173005 | None:intergenic | 15.0% |
| !!! | TCTAAAATTTAAAAAAAGGA+AGG | + | chr3_1:85173233-85173252 | Msa0382540:CDS | 15.0% |
| !!! | TATATCTTGTTTAACTTAAA+AGG | + | chr3_1:85173691-85173710 | Msa0382540:intron | 15.0% |
| !!! | TTAGTTCTTATACTTTTTTT+TGG | + | chr3_1:85174320-85174339 | Msa0382540:intron | 15.0% |
| !!! | TAGTTCTTATACTTTTTTTT+GGG | + | chr3_1:85174321-85174340 | Msa0382540:intron | 15.0% |
| !!! | ATTTTTTTATAAATTGTCTC+CGG | - | chr3_1:85174536-85174555 | None:intergenic | 15.0% |
| !! | ATGGAATTATTAAAAAATTG+TGG | + | chr3_1:85174579-85174598 | Msa0382540:intron | 15.0% |
| !! | TGATATAATGAATGCTTAAA+GGG | - | chr3_1:85168552-85168571 | None:intergenic | 20.0% |
| !! | TTGATATAATGAATGCTTAA+AGG | - | chr3_1:85168553-85168572 | None:intergenic | 20.0% |
| !!! | ATTTTCTAAGATATACATTG+CGG | - | chr3_1:85168826-85168845 | None:intergenic | 20.0% |
| !! | GTAATTCACTATATTTATTG+TGG | + | chr3_1:85169398-85169417 | Msa0382540:intron | 20.0% |
| !! | TTTATCATTTGTATAGACTT+GGG | - | chr3_1:85169744-85169763 | None:intergenic | 20.0% |
| !!! | TTTTATCATTTGTATAGACT+TGG | - | chr3_1:85169745-85169764 | None:intergenic | 20.0% |
| !! | ACAGATAAATAATAAAATGC+AGG | + | chr3_1:85170187-85170206 | Msa0382540:intron | 20.0% |
| !! | TTCTACCAAAATTATTGTAT+GGG | - | chr3_1:85170221-85170240 | None:intergenic | 20.0% |
| !! | ATTCTACCAAAATTATTGTA+TGG | - | chr3_1:85170222-85170241 | None:intergenic | 20.0% |
| !! | AAATTATGTTCAACCTAATA+AGG | - | chr3_1:85170298-85170317 | None:intergenic | 20.0% |
| !!! | TTATTAGGTTGAACATAATT+TGG | + | chr3_1:85170297-85170316 | Msa0382540:intron | 20.0% |
| !! | TGAATAGTATACTTAACTTT+GGG | - | chr3_1:85170416-85170435 | None:intergenic | 20.0% |
| !! | ATAGAAAAATTGTTTACTGT+TGG | - | chr3_1:85170552-85170571 | None:intergenic | 20.0% |
| !! | TTCTATCCAAATATGAATTA+GGG | - | chr3_1:85170665-85170684 | None:intergenic | 20.0% |
| !! | TTTCTATCCAAATATGAATT+AGG | - | chr3_1:85170666-85170685 | None:intergenic | 20.0% |
| !!! | TGAAAATTCGATTTTATACT+TGG | + | chr3_1:85171014-85171033 | Msa0382540:intron | 20.0% |
| !!! | GAAAATTCGATTTTATACTT+GGG | + | chr3_1:85171015-85171034 | Msa0382540:intron | 20.0% |
| !! | AAATTTGGTTATCCTATAAA+AGG | - | chr3_1:85171227-85171246 | None:intergenic | 20.0% |
| !! | TTTAACTATTGTCATGAAAT+AGG | + | chr3_1:85171520-85171539 | Msa0382540:intron | 20.0% |
| !!! | TTATTGGACATTTTCATATT+TGG | - | chr3_1:85171635-85171654 | None:intergenic | 20.0% |
| !!! | AGAAAATACCTTTTAAATTG+TGG | - | chr3_1:85173381-85173400 | None:intergenic | 20.0% |
| !! | TAATCAATTAAAAGTTTGGT+TGG | - | chr3_1:85173457-85173476 | None:intergenic | 20.0% |
| !!! | TATAACAAATCATGTGTTTT+AGG | + | chr3_1:85173626-85173645 | Msa0382540:intron | 20.0% |
| !!! | ATAACAAATCATGTGTTTTA+GGG | + | chr3_1:85173627-85173646 | Msa0382540:intron | 20.0% |
| !!! | AGAAAACTAACTTTTAATTG+TGG | + | chr3_1:85173788-85173807 | Msa0382540:intron | 20.0% |
| !! | TTTTCACTTTCATAGTCAAA+TGG | - | chr3_1:85168306-85168325 | None:intergenic | 25.0% |
| !! | GACAATATCATTCTTTTAGT+AGG | + | chr3_1:85168643-85168662 | Msa0382540:intron | 25.0% |
| ! | AAATAGTACAATATTGAACC+AGG | - | chr3_1:85168866-85168885 | None:intergenic | 25.0% |
| ! | CACATTTACAAAGAATGTAA+TGG | + | chr3_1:85169012-85169031 | Msa0382540:CDS | 25.0% |
| !!! | ACAGTAAAGTTGATTTTGAT+TGG | + | chr3_1:85169247-85169266 | Msa0382540:CDS | 25.0% |
| !!! | CAGTAAAGTTGATTTTGATT+GGG | + | chr3_1:85169248-85169267 | Msa0382540:CDS | 25.0% |
| ! | TTATCCATCAAGTTTAACAT+AGG | - | chr3_1:85169346-85169365 | None:intergenic | 25.0% |
| ! | TATATTTATTGTGGAAATCC+AGG | + | chr3_1:85169407-85169426 | Msa0382540:intron | 25.0% |
| ! | TAGAAATAATTGAGACTTTC+CGG | - | chr3_1:85169526-85169545 | None:intergenic | 25.0% |
| ! | TTATCATTTGTATAGACTTG+GGG | - | chr3_1:85169743-85169762 | None:intergenic | 25.0% |
| ! | TATAAATAGAGAGTAGTGAT+TGG | - | chr3_1:85169779-85169798 | None:intergenic | 25.0% |
| ! | AATCACTACTCTCTATTTAT+AGG | + | chr3_1:85169778-85169797 | Msa0382540:intron | 25.0% |
| ! | TTAAGTTAGTTAGTTAGTTG+TGG | - | chr3_1:85169847-85169866 | None:intergenic | 25.0% |
| ! | AAAAAAAAGGAAAATGCTAG+CGG | - | chr3_1:85170139-85170158 | None:intergenic | 25.0% |
| ! | ATGCAACAACATAATTCATA+TGG | + | chr3_1:85170333-85170352 | Msa0382540:intron | 25.0% |
| ! | TGCAACAACATAATTCATAT+GGG | + | chr3_1:85170334-85170353 | Msa0382540:intron | 25.0% |
| ! | GTGAATAGTATACTTAACTT+TGG | - | chr3_1:85170417-85170436 | None:intergenic | 25.0% |
| ! | TTAAGTATACTATTCACACA+AGG | + | chr3_1:85170420-85170439 | Msa0382540:intron | 25.0% |
| !!! | CTTTTGACTCTAATTTGTTA+AGG | + | chr3_1:85170798-85170817 | Msa0382540:intron | 25.0% |
| ! | AAATTTACATGCATTCTTGA+CGG | + | chr3_1:85170829-85170848 | Msa0382540:intron | 25.0% |
| ! | TTATAGGATAACCAAATTTG+TGG | + | chr3_1:85171228-85171247 | Msa0382540:intron | 25.0% |
| !! | TTTTGACAAAGTTTCAACAT+TGG | - | chr3_1:85171352-85171371 | None:intergenic | 25.0% |
| ! | AGATGTATATCAAAGAAAGT+GGG | + | chr3_1:85171403-85171422 | Msa0382540:intron | 25.0% |
| ! | TTTCAAGAATGCCTTTAAAT+TGG | + | chr3_1:85171464-85171483 | Msa0382540:intron | 25.0% |
| !!! | CTTTTGACTCTAATTTGATA+AGG | - | chr3_1:85171496-85171515 | None:intergenic | 25.0% |
| ! | TAGTATCAACTATAATCGAA+AGG | + | chr3_1:85171603-85171622 | Msa0382540:intron | 25.0% |
| ! | TGAATAGTATGCTTAAACTT+GGG | + | chr3_1:85171874-85171893 | Msa0382540:intron | 25.0% |
| ! | TGCAACAACATAATTCATAT+AGG | - | chr3_1:85170334-85170353 | None:intergenic | 25.0% |
| ! | TGTTTAACATAATATAGTGG+TGG | - | chr3_1:85171995-85172014 | None:intergenic | 25.0% |
| !!! | TAGTTACTTTTCACAATTGT+GGG | - | chr3_1:85172026-85172045 | None:intergenic | 25.0% |
| ! | AAAAGTAACTACAAGAATGT+TGG | + | chr3_1:85172035-85172054 | Msa0382540:intron | 25.0% |
| !! | TAAGTTGAATTTCTTAATGG+TGG | - | chr3_1:85172306-85172325 | None:intergenic | 25.0% |
| !! | GTCTAAGTTGAATTTCTTAA+TGG | - | chr3_1:85172309-85172328 | None:intergenic | 25.0% |
| ! | AATGATAAAACAACGACAAA+AGG | - | chr3_1:85172354-85172373 | None:intergenic | 25.0% |
| ! | TATTTACAGATATAGATCAC+TGG | - | chr3_1:85172417-85172436 | None:intergenic | 25.0% |
| ! | ACAAGATATGTATCTTAGTT+TGG | + | chr3_1:85172786-85172805 | Msa0382540:CDS | 25.0% |
| ! | ATAAAAGATCAGAAACAGTT+TGG | + | chr3_1:85172923-85172942 | Msa0382540:CDS | 25.0% |
| ! | TAAAAGATCAGAAACAGTTT+GGG | + | chr3_1:85172924-85172943 | Msa0382540:CDS | 25.0% |
| ! | TAAAAAAAGGAAGGACAAAA+TGG | + | chr3_1:85173242-85173261 | Msa0382540:CDS | 25.0% |
| ! | AAAAAAAGGAAGGACAAAAT+GGG | + | chr3_1:85173243-85173262 | Msa0382540:CDS | 25.0% |
| ! | GAGAATGTTATTATTGATGA+GGG | + | chr3_1:85173270-85173289 | Msa0382540:CDS | 25.0% |
| !! | ATACCTTTTAAATTGTGGAT+TGG | - | chr3_1:85173376-85173395 | None:intergenic | 25.0% |
| ! | AGCGATAAAAAGTAAAAACA+TGG | - | chr3_1:85173509-85173528 | None:intergenic | 25.0% |
| ! | AAAGACATTTGCATTACTTT+GGG | - | chr3_1:85173888-85173907 | None:intergenic | 25.0% |
| ! | AAAAGACATTTGCATTACTT+TGG | - | chr3_1:85173889-85173908 | None:intergenic | 25.0% |
| ! | AGATGGAAATCAAAATTTGA+AGG | + | chr3_1:85174047-85174066 | Msa0382540:CDS | 25.0% |
| ! | AATTGCACCACTAAAAAAAA+TGG | + | chr3_1:85174222-85174241 | Msa0382540:intron | 25.0% |
| !!! | TTAGCATCCATTTTTTTTAG+TGG | - | chr3_1:85174232-85174251 | None:intergenic | 25.0% |
| ! | TTTGCAATATCAAAGATAAC+AGG | - | chr3_1:85174285-85174304 | None:intergenic | 25.0% |
| ! | AATATTGAAAATGAAATGGG+TGG | + | chr3_1:85174363-85174382 | Msa0382540:intron | 25.0% |
| !! | TTTTTCTCTACTCCAATATA+TGG | + | chr3_1:85174482-85174501 | Msa0382540:intron | 25.0% |
| TCTAAAGAATGAAACAAAGG+TGG | + | chr3_1:85167611-85167630 | Msa0382540:CDS | 30.0% | |
| !! | AAAGTGAGGTTGTTTTCTAT+GGG | - | chr3_1:85167717-85167736 | None:intergenic | 30.0% |
| GAAAATCAGATTTCAAAGTG+AGG | - | chr3_1:85167731-85167750 | None:intergenic | 30.0% | |
| CTTCTTCTACTTTGTAGTAA+TGG | - | chr3_1:85167758-85167777 | None:intergenic | 30.0% | |
| TATAAATTAGGAACTCGAAG+AGG | + | chr3_1:85168014-85168033 | Msa0382540:intron | 30.0% | |
| TGATTGAGAAAGATACTCAT+AGG | + | chr3_1:85168043-85168062 | Msa0382540:CDS | 30.0% | |
| ! | ATGTTAAGAGTTGGAACTTT+TGG | + | chr3_1:85168108-85168127 | Msa0382540:intron | 30.0% |
| ATTTGATCATTCCATTCGTT+GGG | - | chr3_1:85168215-85168234 | None:intergenic | 30.0% | |
| AACGAATGGAATGATCAAAT+CGG | + | chr3_1:85168215-85168234 | Msa0382540:CDS | 30.0% | |
| CTTCAGTGTTAAAGTATGTT+TGG | - | chr3_1:85168598-85168617 | None:intergenic | 30.0% | |
| TGAAGAGTAATGTGTAAACA+TGG | + | chr3_1:85168613-85168632 | Msa0382540:intron | 30.0% | |
| ATTACACTCCCAAAAATACA+TGG | + | chr3_1:85168666-85168685 | Msa0382540:intron | 30.0% | |
| ! | ACTGCTTACCATGTATTTTT+GGG | - | chr3_1:85168677-85168696 | None:intergenic | 30.0% |
| ATGAATTACAAGTGAGACAT+AGG | - | chr3_1:85168741-85168760 | None:intergenic | 30.0% | |
| !! | TACAACTTTTTCTGTATTCC+TGG | + | chr3_1:85168845-85168864 | Msa0382540:intron | 30.0% |
| AAGTTACGGGATTATAAAAG+AGG | - | chr3_1:85168924-85168943 | None:intergenic | 30.0% | |
| CAGATAAGGAATTAAGTTAC+GGG | - | chr3_1:85168937-85168956 | None:intergenic | 30.0% | |
| GCAGATAAGGAATTAAGTTA+CGG | - | chr3_1:85168938-85168957 | None:intergenic | 30.0% | |
| TATCTAGTCCACTTGATTTA+AGG | + | chr3_1:85169046-85169065 | Msa0382540:CDS | 30.0% | |
| GGAATAAACCTTAAATCAAG+TGG | - | chr3_1:85169057-85169076 | None:intergenic | 30.0% | |
| TAAGGTTTATTCCTGACATT+TGG | + | chr3_1:85169064-85169083 | Msa0382540:CDS | 30.0% | |
| AAGGTTTATTCCTGACATTT+GGG | + | chr3_1:85169065-85169084 | Msa0382540:CDS | 30.0% | |
| ! | AACTACGTAGTCAAAGATTT+TGG | + | chr3_1:85169207-85169226 | Msa0382540:CDS | 30.0% |
| !!! | TAAAGTTGATTTTGATTGGG+AGG | + | chr3_1:85169251-85169270 | Msa0382540:CDS | 30.0% |
| AAGAAAATTTACTGATGAGC+AGG | + | chr3_1:85169305-85169324 | Msa0382540:CDS | 30.0% | |
| ATCAAGTTTAACATAGGCTA+GGG | - | chr3_1:85169340-85169359 | None:intergenic | 30.0% | |
| !! | TCTTTGTTTCTGAAGACAAT+AGG | + | chr3_1:85169452-85169471 | Msa0382540:intron | 30.0% |
| GAAAGCTGGTAAAACTATAT+TGG | + | chr3_1:85169656-85169675 | Msa0382540:intron | 30.0% | |
| AGTTAGTTGTGGCTAAAATA+GGG | - | chr3_1:85169836-85169855 | None:intergenic | 30.0% | |
| TAGTTAGTTGTGGCTAAAAT+AGG | - | chr3_1:85169837-85169856 | None:intergenic | 30.0% | |
| CTGATAGAGAGAAAATGAAA+AGG | - | chr3_1:85169893-85169912 | None:intergenic | 30.0% | |
| TTCTCCTTAATAGCTATTCA+TGG | + | chr3_1:85169948-85169967 | Msa0382540:intron | 30.0% | |
| TCTCCTTAATAGCTATTCAT+GGG | + | chr3_1:85169949-85169968 | Msa0382540:intron | 30.0% | |
| AAACCCATGAATAGCTATTA+AGG | - | chr3_1:85169955-85169974 | None:intergenic | 30.0% | |
| AAAAAAAGGAAAATGCTAGC+GGG | - | chr3_1:85170138-85170157 | None:intergenic | 30.0% | |
| ACCAAAATTATTGTATGGGA+GGG | - | chr3_1:85170217-85170236 | None:intergenic | 30.0% | |
| TACCAAAATTATTGTATGGG+AGG | - | chr3_1:85170218-85170237 | None:intergenic | 30.0% | |
| !! | TTAGGTTGAACATAATTTGG+TGG | + | chr3_1:85170300-85170319 | Msa0382540:intron | 30.0% |
| TAAAATCTTCTGCAAGTTGT+GGG | - | chr3_1:85170392-85170411 | None:intergenic | 30.0% | |
| ATAAAATCTTCTGCAAGTTG+TGG | - | chr3_1:85170393-85170412 | None:intergenic | 30.0% | |
| !! | TGTTAATTGCTTTTCCATTG+AGG | + | chr3_1:85170464-85170483 | Msa0382540:intron | 30.0% |
| ATTGGACCCTAATTCATATT+TGG | + | chr3_1:85170656-85170675 | Msa0382540:intron | 30.0% | |
| !! | TAGTACTTGTTATTCTGCAA+TGG | - | chr3_1:85170708-85170727 | None:intergenic | 30.0% |
| ATTGCAGAATAACAAGTACT+AGG | + | chr3_1:85170707-85170726 | Msa0382540:intron | 30.0% | |
| TTAACTATTACTCGTGAGAT+AGG | - | chr3_1:85170773-85170792 | None:intergenic | 30.0% | |
| AGAATGCATGTAAATTTGGA+TGG | - | chr3_1:85170826-85170845 | None:intergenic | 30.0% | |
| GTCAAGAATGCATGTAAATT+TGG | - | chr3_1:85170830-85170849 | None:intergenic | 30.0% | |
| CAACTATTATAGAATCACCA+AGG | - | chr3_1:85171070-85171089 | None:intergenic | 30.0% | |
| !! | TGATTTGGTAGTCAGATTAA+AGG | - | chr3_1:85171270-85171289 | None:intergenic | 30.0% |
| ! | AAAAATCGACAGAGTTGATT+TGG | - | chr3_1:85171285-85171304 | None:intergenic | 30.0% |
| CAGATGTATATCAAAGAAAG+TGG | + | chr3_1:85171402-85171421 | Msa0382540:intron | 30.0% | |
| AAGAATGCCTTTAAATTGGA+CGG | + | chr3_1:85171468-85171487 | Msa0382540:intron | 30.0% | |
| ATTGCAGAATAGTAAGAACT+AGG | - | chr3_1:85171584-85171603 | None:intergenic | 30.0% | |
| GTAGATTATTTCCTCATGAA+TGG | + | chr3_1:85171789-85171808 | Msa0382540:intron | 30.0% | |
| !! | CAATTGTTTTTCCATTCATG+AGG | - | chr3_1:85171803-85171822 | None:intergenic | 30.0% |
| ATGGAAAAACAATTGACACA+AGG | + | chr3_1:85171808-85171827 | Msa0382540:intron | 30.0% | |
| GTGAATAGTATGCTTAAACT+TGG | + | chr3_1:85171873-85171892 | Msa0382540:intron | 30.0% | |
| GAATAGTATGCTTAAACTTG+GGG | + | chr3_1:85171875-85171894 | Msa0382540:intron | 30.0% | |
| !!! | GTAGTTACTTTTCACAATTG+TGG | - | chr3_1:85172027-85172046 | None:intergenic | 30.0% |
| ! | TTTTTGTGAACCATGACTAA+GGG | - | chr3_1:85172148-85172167 | None:intergenic | 30.0% |
| !!! | TTTTTTGTGAACCATGACTA+AGG | - | chr3_1:85172149-85172168 | None:intergenic | 30.0% |
| AAAAAAGCTTGTGCTTTACT+AGG | + | chr3_1:85172163-85172182 | Msa0382540:intron | 30.0% | |
| AAAAAGCTTGTGCTTTACTA+GGG | + | chr3_1:85172164-85172183 | Msa0382540:intron | 30.0% | |
| TTAGGAAAAGATTTGTAAGC+TGG | - | chr3_1:85172270-85172289 | None:intergenic | 30.0% | |
| ! | ATTTCTTAATGGTGGAACAT+TGG | - | chr3_1:85172298-85172317 | None:intergenic | 30.0% |
| ! | AAACAACGACAAAAGGTATA+TGG | - | chr3_1:85172347-85172366 | None:intergenic | 30.0% |
| ! | AATGCAATTTCTTTTTGCGT+TGG | + | chr3_1:85172375-85172394 | Msa0382540:intron | 30.0% |
| TTATATGTATGTGCATGACA+TGG | - | chr3_1:85172441-85172460 | None:intergenic | 30.0% | |
| ATTTGAATGACAGAAGAAAC+CGG | + | chr3_1:85172564-85172583 | Msa0382540:intron | 30.0% | |
| ! | TATCTTAGTTTGGTCTATTC+AGG | + | chr3_1:85172796-85172815 | Msa0382540:CDS | 30.0% |
| AAAAAAGGAAGGACAAAATG+GGG | + | chr3_1:85173244-85173263 | Msa0382540:CDS | 30.0% | |
| GGAGAATGTTATTATTGATG+AGG | + | chr3_1:85173269-85173288 | Msa0382540:CDS | 30.0% | |
| TCATCACTATATGTACTGTT+TGG | - | chr3_1:85173303-85173322 | None:intergenic | 30.0% | |
| !!! | CTTTTAAATTGTGGATTGGT+AGG | - | chr3_1:85173372-85173391 | None:intergenic | 30.0% |
| CTACCAATCCACAATTTAAA+AGG | + | chr3_1:85173370-85173389 | Msa0382540:CDS | 30.0% | |
| ! | TTGATGTTTTCATCAATGGT+GGG | - | chr3_1:85173584-85173603 | None:intergenic | 30.0% |
| ! | ATTGATGTTTTCATCAATGG+TGG | - | chr3_1:85173585-85173604 | None:intergenic | 30.0% |
| ACCATTGATGAAAACATCAA+TGG | + | chr3_1:85173584-85173603 | Msa0382540:intron | 30.0% | |
| ! | ACCATTGATGTTTTCATCAA+TGG | - | chr3_1:85173588-85173607 | None:intergenic | 30.0% |
| ! | CTTAAAAGGTGACTTTGAAA+TGG | + | chr3_1:85173705-85173724 | Msa0382540:intron | 30.0% |
| ! | GTAATGCAAATGTCTTTTGA+TGG | + | chr3_1:85173891-85173910 | Msa0382540:CDS | 30.0% |
| ! | TAACTATCTATCGTGTTGAT+TGG | - | chr3_1:85174107-85174126 | None:intergenic | 30.0% |
| ! | ATTTAGCATGGTGCTAAATA+AGG | - | chr3_1:85174193-85174212 | None:intergenic | 30.0% |
| ATTAGTGTGCATATTTAGCA+TGG | - | chr3_1:85174205-85174224 | None:intergenic | 30.0% | |
| GCATAATTATTGCTTATAGC+CGG | + | chr3_1:85174514-85174533 | Msa0382540:intron | 30.0% | |
| !!! | AATAGTCACTTTTGCAAAGA+TGG | + | chr3_1:85174645-85174664 | Msa0382540:intron | 30.0% |
| TGGAAGAAGAATGAAAAAGA+GGG | + | chr3_1:85174670-85174689 | Msa0382540:CDS | 30.0% | |
| AAGAAAAACAACGCAAGAAG+AGG | + | chr3_1:85167526-85167545 | Msa0382540:CDS | 35.0% | |
| !! | GGCTCTAAAGAATGAAACAA+AGG | + | chr3_1:85167608-85167627 | Msa0382540:CDS | 35.0% |
| !! | CAAAGTGAGGTTGTTTTCTA+TGG | - | chr3_1:85167718-85167737 | None:intergenic | 35.0% |
| GAAGAAGAAGAAGAAGAAGA+AGG | + | chr3_1:85167771-85167790 | Msa0382540:CDS | 35.0% | |
| AAGGTGTGTATGTTAAGAGT+TGG | + | chr3_1:85168099-85168118 | Msa0382540:intron | 35.0% | |
| AATTCATTTGTCCCAACGAA+TGG | + | chr3_1:85168201-85168220 | Msa0382540:CDS | 35.0% | |
| GATTTGATCATTCCATTCGT+TGG | - | chr3_1:85168216-85168235 | None:intergenic | 35.0% | |
| AGTCAAATGGAACAAATCCA+CGG | - | chr3_1:85168293-85168312 | None:intergenic | 35.0% | |
| ! | CACTGCTTACCATGTATTTT+TGG | - | chr3_1:85168678-85168697 | None:intergenic | 35.0% |
| AAATACATGGTAAGCAGTGA+AGG | + | chr3_1:85168679-85168698 | Msa0382540:intron | 35.0% | |
| CAGATAACAAATCTATGCTG+TGG | - | chr3_1:85168779-85168798 | None:intergenic | 35.0% | |
| TATAAAAGAGGAAAGCAGAG+AGG | - | chr3_1:85168912-85168931 | None:intergenic | 35.0% | |
| TGTTTGAATTCCCAAATGTC+AGG | - | chr3_1:85169078-85169097 | None:intergenic | 35.0% | |
| TGACATTTGGGAATTCAAAC+AGG | + | chr3_1:85169077-85169096 | Msa0382540:CDS | 35.0% | |
| TTTAACTCCTTTCAATGCTC+AGG | + | chr3_1:85169176-85169195 | Msa0382540:intron | 35.0% | |
| CATCAAGTTTAACATAGGCT+AGG | - | chr3_1:85169341-85169360 | None:intergenic | 35.0% | |
| CTAGCCTATGTTAAACTTGA+TGG | + | chr3_1:85169339-85169358 | Msa0382540:intron | 35.0% | |
| GAAACAAAGACCTGATATCA+TGG | - | chr3_1:85169442-85169461 | None:intergenic | 35.0% | |
| GCTTTCTTATGTCTAGTCAA+TGG | - | chr3_1:85169642-85169661 | None:intergenic | 35.0% | |
| TTGACTAGACATAAGAAAGC+TGG | + | chr3_1:85169642-85169661 | Msa0382540:intron | 35.0% | |
| TTGGAATGAATAAACTCCCA+CGG | + | chr3_1:85169675-85169694 | Msa0382540:intron | 35.0% | |
| ! | TTTTCCTTACTACAAGCTTG+AGG | - | chr3_1:85170013-85170032 | None:intergenic | 35.0% |
| GTAGTAAGGAAAATGCTACT+CGG | + | chr3_1:85170020-85170039 | Msa0382540:intron | 35.0% | |
| ! | AGGGGAAATGTTAGTTTACA+TGG | - | chr3_1:85170113-85170132 | None:intergenic | 35.0% |
| AAAAAAGGAAAATGCTAGCG+GGG | - | chr3_1:85170137-85170156 | None:intergenic | 35.0% | |
| CAAAATTATTGTATGGGAGG+GGG | - | chr3_1:85170215-85170234 | None:intergenic | 35.0% | |
| CCAAAATTATTGTATGGGAG+GGG | - | chr3_1:85170216-85170235 | None:intergenic | 35.0% | |
| AGGATTAGACACATCAAATG+TGG | + | chr3_1:85170271-85170290 | Msa0382540:intron | 35.0% | |
| CATCAAATGTGGACCTTATT+AGG | + | chr3_1:85170282-85170301 | Msa0382540:intron | 35.0% | |
| !! | AACACAGACTAAGCTTTGAA+TGG | - | chr3_1:85170448-85170467 | None:intergenic | 35.0% |
| !! | TAATTGCTTTTCCATTGAGG+AGG | + | chr3_1:85170467-85170486 | Msa0382540:intron | 35.0% |
| GCTTCGATTGACACAATTAT+TGG | + | chr3_1:85170638-85170657 | Msa0382540:intron | 35.0% | |
| ! | TGTTACTTATCACGTTTCTG+AGG | + | chr3_1:85170732-85170751 | Msa0382540:intron | 35.0% |
| GTTACTTATCACGTTTCTGA+GGG | + | chr3_1:85170733-85170752 | Msa0382540:intron | 35.0% | |
| TGATGAATTAGCAAGTGTGA+TGG | - | chr3_1:85170867-85170886 | None:intergenic | 35.0% | |
| TGCATATTCTTCGACAACAT+AGG | + | chr3_1:85170900-85170919 | Msa0382540:intron | 35.0% | |
| GGTAGTTGTTCAATATCTTC+TGG | + | chr3_1:85170921-85170940 | Msa0382540:intron | 35.0% | |
| AGTTGTTCAATATCTTCTGG+CGG | + | chr3_1:85170924-85170943 | Msa0382540:intron | 35.0% | |
| !!! | CGATTTTATACTTGGGTTGA+AGG | + | chr3_1:85171022-85171041 | Msa0382540:intron | 35.0% |
| TTATAGAATCACCAAGGTTG+TGG | - | chr3_1:85171064-85171083 | None:intergenic | 35.0% | |
| TTGGATTCTATAGCGGTTTA+TGG | - | chr3_1:85171151-85171170 | None:intergenic | 35.0% | |
| ! | ATCGGGTTATCACCTTTTAT+AGG | + | chr3_1:85171212-85171231 | Msa0382540:intron | 35.0% |
| TAAGGAACCGTCCAATTTAA+AGG | - | chr3_1:85171478-85171497 | None:intergenic | 35.0% | |
| CTGTAACATCACATTTCCAA+GGG | - | chr3_1:85171560-85171579 | None:intergenic | 35.0% | |
| TCTGTAACATCACATTTCCA+AGG | - | chr3_1:85171561-85171580 | None:intergenic | 35.0% | |
| !! | ACTAAGCTTTGAATGGATCA+TGG | + | chr3_1:85171831-85171850 | Msa0382540:intron | 35.0% |
| AAGCATACTATTCACACAAG+TGG | - | chr3_1:85171868-85171887 | None:intergenic | 35.0% | |
| GGGTAAATCTTCTTCAAGAT+GGG | + | chr3_1:85171895-85171914 | Msa0382540:intron | 35.0% | |
| GGTAAATCTTCTTCAAGATG+GGG | + | chr3_1:85171896-85171915 | Msa0382540:intron | 35.0% | |
| CCTTGAAAGATTAAGGAAAG+AGG | - | chr3_1:85172121-85172140 | None:intergenic | 35.0% | |
| CCTCTTTCCTTAATCTTTCA+AGG | + | chr3_1:85172118-85172137 | Msa0382540:intron | 35.0% | |
| AAAAGCTTGTGCTTTACTAG+GGG | + | chr3_1:85172165-85172184 | Msa0382540:intron | 35.0% | |
| CCATTAAATTGGAGAAACGA+GGG | - | chr3_1:85172213-85172232 | None:intergenic | 35.0% | |
| TCCATTAAATTGGAGAAACG+AGG | - | chr3_1:85172214-85172233 | None:intergenic | 35.0% | |
| AAAATTAGGCTCAATATCCC+CGG | + | chr3_1:85172242-85172261 | Msa0382540:intron | 35.0% | |
| ! | AAAGATTTGTAAGCTGGTTC+CGG | - | chr3_1:85172264-85172283 | None:intergenic | 35.0% |
| TTACAGATATAGATCACTGG+AGG | - | chr3_1:85172414-85172433 | None:intergenic | 35.0% | |
| TTTGAATGACAGAAGAAACC+GGG | + | chr3_1:85172565-85172584 | Msa0382540:intron | 35.0% | |
| ATGAGTATATGAATGCTTCC+CGG | - | chr3_1:85172586-85172605 | None:intergenic | 35.0% | |
| AGCAAGCTATTAAAGCAGAA+GGG | - | chr3_1:85172674-85172693 | None:intergenic | 35.0% | |
| GTTGGAATGGAAAGAATACT+TGG | + | chr3_1:85172696-85172715 | Msa0382540:CDS | 35.0% | |
| TTAGACATTCCAATCCTGAA+TGG | - | chr3_1:85172879-85172898 | None:intergenic | 35.0% | |
| !! | AAACAGTTTGGGAAGCATTT+CGG | + | chr3_1:85172935-85172954 | Msa0382540:CDS | 35.0% |
| AGCAGATGAATTCTTCATTG+AGG | + | chr3_1:85173044-85173063 | Msa0382540:CDS | 35.0% | |
| ACATAATAACCTCCAACGTA+TGG | + | chr3_1:85173119-85173138 | Msa0382540:CDS | 35.0% | |
| TTTATCGCTTCACACCTATT+TGG | + | chr3_1:85173520-85173539 | Msa0382540:intron | 35.0% | |
| ATAGAAAAGCCGAACCAAAT+AGG | - | chr3_1:85173537-85173556 | None:intergenic | 35.0% | |
| GACTCAAATCCATTCATAAC+TGG | + | chr3_1:85173649-85173668 | Msa0382540:intron | 35.0% | |
| ATGCAGAAGGATAAGAAAGA+AGG | + | chr3_1:85173918-85173937 | Msa0382540:CDS | 35.0% | |
| GAAGGATAAGAAAGAAGGAT+TGG | + | chr3_1:85173923-85173942 | Msa0382540:CDS | 35.0% | |
| ! | TTGAAGGTGTAGAGAAAAAG+AGG | + | chr3_1:85174063-85174082 | Msa0382540:intron | 35.0% |
| TGCAACGATGAACCATATAT+TGG | - | chr3_1:85174497-85174516 | None:intergenic | 35.0% | |
| GTGGAAGAAGAATGAAAAAG+AGG | + | chr3_1:85174669-85174688 | Msa0382540:CDS | 35.0% | |
| ! | ATCAGTGATCCTCGTTTTGT+AGG | + | chr3_1:85167558-85167577 | Msa0382540:CDS | 40.0% |
| AGAAGAAGAAGAAGGAGAAC+AGG | + | chr3_1:85167791-85167810 | Msa0382540:CDS | 40.0% | |
| GAAGAAGAAGAAGGAGAACA+GGG | + | chr3_1:85167792-85167811 | Msa0382540:CDS | 40.0% | |
| TGAGAAAGATACTCATAGGC+TGG | + | chr3_1:85168047-85168066 | Msa0382540:CDS | 40.0% | |
| GAACACTGCATACAAGTCAA+CGG | - | chr3_1:85168181-85168200 | None:intergenic | 40.0% | |
| CTGTCTATCCAACTGAGTTT+GGG | + | chr3_1:85168241-85168260 | Msa0382540:CDS | 40.0% | |
| ACTTTAGCTGTATGCCATTC+AGG | - | chr3_1:85168428-85168447 | None:intergenic | 40.0% | |
| TTTGTAAATGTGAGCTGCTG+TGG | - | chr3_1:85169004-85169023 | None:intergenic | 40.0% | |
| ATGATGATCCCTTTCGCAAA+AGG | + | chr3_1:85169274-85169293 | Msa0382540:CDS | 40.0% | |
| ! | CTCAAGATCCTTTTGCGAAA+GGG | - | chr3_1:85169285-85169304 | None:intergenic | 40.0% |
| ! | TCTCAAGATCCTTTTGCGAA+AGG | - | chr3_1:85169286-85169305 | None:intergenic | 40.0% |
| CAATAGGAAATGCAGAAGCA+AGG | + | chr3_1:85169468-85169487 | Msa0382540:intron | 40.0% | |
| TGCAGAAGCAAGGAAAAACA+TGG | + | chr3_1:85169478-85169497 | Msa0382540:intron | 40.0% | |
| AAGCAAGGAAAAACATGGTC+TGG | + | chr3_1:85169483-85169502 | Msa0382540:intron | 40.0% | |
| AGCAAGGAAAAACATGGTCT+GGG | + | chr3_1:85169484-85169503 | Msa0382540:intron | 40.0% | |
| AACTGAATCACACACCAACT+AGG | + | chr3_1:85169594-85169613 | Msa0382540:intron | 40.0% | |
| AACTAGTATCAGAGCCTAGT+TGG | - | chr3_1:85169611-85169630 | None:intergenic | 40.0% | |
| ! | TAGGCTCTGATACTAGTTGA+TGG | + | chr3_1:85169613-85169632 | Msa0382540:intron | 40.0% |
| ! | AGGCTCTGATACTAGTTGAT+GGG | + | chr3_1:85169614-85169633 | Msa0382540:intron | 40.0% |
| AATGAATAAACTCCCACGGT+AGG | + | chr3_1:85169679-85169698 | Msa0382540:intron | 40.0% | |
| ! | TGAGGACAAAGTGTCTCATT+AGG | - | chr3_1:85169995-85170014 | None:intergenic | 40.0% |
| TTGTCCTCAAGCTTGTAGTA+AGG | + | chr3_1:85170006-85170025 | Msa0382540:intron | 40.0% | |
| GGACATCTAAGAGTTTGAGT+AGG | + | chr3_1:85170074-85170093 | Msa0382540:intron | 40.0% | |
| TAAGAGTTTGAGTAGGTCCA+GGG | + | chr3_1:85170081-85170100 | Msa0382540:intron | 40.0% | |
| AGTTTACATGGATAGAACCC+TGG | - | chr3_1:85170101-85170120 | None:intergenic | 40.0% | |
| ! | CCCCTCCCATACAATAATTT+TGG | + | chr3_1:85170213-85170232 | Msa0382540:intron | 40.0% |
| ! | GGTTGAACATAATTTGGTGG+TGG | + | chr3_1:85170303-85170322 | Msa0382540:intron | 40.0% |
| CAAGTAGATTTCCTCCTCAA+TGG | - | chr3_1:85170481-85170500 | None:intergenic | 40.0% | |
| CATTGAGGAGGAAATCTACT+TGG | + | chr3_1:85170479-85170498 | Msa0382540:intron | 40.0% | |
| GAGGAAATCTACTTGGTTGA+GGG | + | chr3_1:85170486-85170505 | Msa0382540:intron | 40.0% | |
| ACAACAGAAGCTCCATATTC+AGG | + | chr3_1:85170611-85170630 | Msa0382540:intron | 40.0% | |
| TTCTGGCGGAGTTTCAATAT+TGG | + | chr3_1:85170938-85170957 | Msa0382540:intron | 40.0% | |
| AAGTGCATAATCAATCCCTC+AGG | + | chr3_1:85170962-85170981 | Msa0382540:intron | 40.0% | |
| AGGGAAATGTAAATCCGACT+GGG | - | chr3_1:85171104-85171123 | None:intergenic | 40.0% | |
| AAGGGAAATGTAAATCCGAC+TGG | - | chr3_1:85171105-85171124 | None:intergenic | 40.0% | |
| TTTATGGCACTGCATAGAGA+AGG | - | chr3_1:85171135-85171154 | None:intergenic | 40.0% | |
| !! | CGAAGTGTTGGATTCTATAG+CGG | - | chr3_1:85171158-85171177 | None:intergenic | 40.0% |
| CGCTATAGAATCCAACACTT+CGG | + | chr3_1:85171156-85171175 | Msa0382540:intron | 40.0% | |
| GCTATAGAATCCAACACTTC+GGG | + | chr3_1:85171157-85171176 | Msa0382540:intron | 40.0% | |
| TGATAACCCGATTCCACTTT+GGG | - | chr3_1:85171204-85171223 | None:intergenic | 40.0% | |
| AGTCAAACGCTCCACAAATT+TGG | - | chr3_1:85171242-85171261 | None:intergenic | 40.0% | |
| AAAATCAATCCCTCGAGAGA+GGG | - | chr3_1:85171322-85171341 | None:intergenic | 40.0% | |
| AAGTGGGATGATGAACTATC+AGG | + | chr3_1:85171419-85171438 | Msa0382540:intron | 40.0% | |
| !! | CACAAGGACTAAGCTTTGAA+TGG | + | chr3_1:85171824-85171843 | Msa0382540:intron | 40.0% |
| GGGGTAAATCTTCTTCAAGA+TGG | + | chr3_1:85171894-85171913 | Msa0382540:intron | 40.0% | |
| TTATGTTGTTGCATCCATGC+TGG | + | chr3_1:85171961-85171980 | Msa0382540:intron | 40.0% | |
| AGAATACAAGAAGCTGCTAG+TGG | - | chr3_1:85172090-85172109 | None:intergenic | 40.0% | |
| CCCTCGTTTCTCCAATTTAA+TGG | + | chr3_1:85172210-85172229 | Msa0382540:intron | 40.0% | |
| ! | AAGATTTGTAAGCTGGTTCC+GGG | - | chr3_1:85172263-85172282 | None:intergenic | 40.0% |
| ! | CAAAAGGTATATGGCACACA+AGG | - | chr3_1:85172338-85172357 | None:intergenic | 40.0% |
| GAGCAAGCTATTAAAGCAGA+AGG | - | chr3_1:85172675-85172694 | None:intergenic | 40.0% | |
| !! | GCTTTAATAGCTTGCTCAGT+TGG | + | chr3_1:85172678-85172697 | Msa0382540:intron | 40.0% |
| !! | AATAGCTTGCTCAGTTGGAA+TGG | + | chr3_1:85172683-85172702 | Msa0382540:intron | 40.0% |
| TAACAGTGAGACTGATGATC+AGG | + | chr3_1:85172744-85172763 | Msa0382540:CDS | 40.0% | |
| !! | TGATGATCAGGTTGATGAGA+AGG | + | chr3_1:85172756-85172775 | Msa0382540:CDS | 40.0% |
| AGTTTGGTCTATTCAGGCAA+TGG | + | chr3_1:85172802-85172821 | Msa0382540:CDS | 40.0% | |
| ACATTCCAATCCTGAATGGA+AGG | - | chr3_1:85172875-85172894 | None:intergenic | 40.0% | |
| TTCTTCCTCTTCTTAGCACA+AGG | - | chr3_1:85173072-85173091 | None:intergenic | 40.0% | |
| ! | AGAAGAGGAAGAAAGCACAA+AGG | + | chr3_1:85173079-85173098 | Msa0382540:CDS | 40.0% |
| ! | TATTGCTTGCTGATGACAAG+AGG | + | chr3_1:85173184-85173203 | Msa0382540:CDS | 40.0% |
| GATGACAAGAGGATAGAAAC+TGG | + | chr3_1:85173195-85173214 | Msa0382540:CDS | 40.0% | |
| ! | AGGATAGAAACTGGTCTCAA+GGG | + | chr3_1:85173204-85173223 | Msa0382540:CDS | 40.0% |
| ! | AAAAGAAGCGCAACAAAACG+TGG | - | chr3_1:85173327-85173346 | None:intergenic | 40.0% |
| GTAGGATCAATAGCATAGTC+AGG | - | chr3_1:85173354-85173373 | None:intergenic | 40.0% | |
| !! | ATGTTTTCATCAATGGTGGG+TGG | - | chr3_1:85173581-85173600 | None:intergenic | 40.0% |
| CCATAACAGCCAGTTATGAA+TGG | - | chr3_1:85173661-85173680 | None:intergenic | 40.0% | |
| CCATTCATAACTGGCTGTTA+TGG | + | chr3_1:85173658-85173677 | Msa0382540:intron | 40.0% | |
| !! | TTTTGATGGCATGATGCAGA+AGG | + | chr3_1:85173905-85173924 | Msa0382540:CDS | 40.0% |
| CAAAGCAGATCCAATCAAGA+TGG | + | chr3_1:85174012-85174031 | Msa0382540:CDS | 40.0% | |
| !! | ATCTATCGTGTTGATTGGAG+TGG | - | chr3_1:85174102-85174121 | None:intergenic | 40.0% |
| ! | AGCATGGTGCTAAATAAGGA+AGG | - | chr3_1:85174189-85174208 | None:intergenic | 40.0% |
| ! | GTGGATGCAAGTGTTTGTTA+TGG | + | chr3_1:85174382-85174401 | Msa0382540:intron | 40.0% |
| !! | TCACTTTTGCAAAGATGGAG+TGG | + | chr3_1:85174650-85174669 | Msa0382540:CDS | 40.0% |
| TTAGAGCCTCTCGAAAACGA+GGG | - | chr3_1:85167596-85167615 | None:intergenic | 45.0% | |
| ! | TTTAGAGCCTCTCGAAAACG+AGG | - | chr3_1:85167597-85167616 | None:intergenic | 45.0% |
| AGAAGGAGAACAGGGATTGA+TGG | + | chr3_1:85167800-85167819 | Msa0382540:CDS | 45.0% | |
| TACTGACACGCTTGATATGC+AGG | + | chr3_1:85167899-85167918 | Msa0382540:CDS | 45.0% | |
| TCAAGATGTCTAGTCTCGTC+TGG | + | chr3_1:85167940-85167959 | Msa0382540:intron | 45.0% | |
| !! | CATGGACTGGAACTATGTGA+AGG | + | chr3_1:85168080-85168099 | Msa0382540:CDS | 45.0% |
| GCTGTCTATCCAACTGAGTT+TGG | + | chr3_1:85168240-85168259 | Msa0382540:CDS | 45.0% | |
| TGGGCTTCAACGTATGAAAG+AGG | + | chr3_1:85168260-85168279 | Msa0382540:CDS | 45.0% | |
| ATGAAAGAGGAGAATAGCCG+TGG | + | chr3_1:85168273-85168292 | Msa0382540:CDS | 45.0% | |
| ! | AAAGCAGAGAGGTGCACATA+TGG | - | chr3_1:85168901-85168920 | None:intergenic | 45.0% |
| AATTCCTTATCTGCCTCTGC+AGG | + | chr3_1:85168944-85168963 | Msa0382540:intron | 45.0% | |
| GGAATTCAAACAGGAGCCTA+GGG | + | chr3_1:85169086-85169105 | Msa0382540:CDS | 45.0% | |
| ACCTTTGTCACAACATCCCT+AGG | - | chr3_1:85169105-85169124 | None:intergenic | 45.0% | |
| TCTTTGACTACGTAGTTCGC+AGG | - | chr3_1:85169204-85169223 | None:intergenic | 45.0% | |
| ! | TTACTGTGCTGAAGTACTCG+AGG | - | chr3_1:85169234-85169253 | None:intergenic | 45.0% |
| ! | ATATCATGGTGATGCAAGCC+TGG | - | chr3_1:85169428-85169447 | None:intergenic | 45.0% |
| GCTTGCATCACCATGATATC+AGG | + | chr3_1:85169429-85169448 | Msa0382540:intron | 45.0% | |
| GGGAAATTTGAGAGTCTCTC+CGG | + | chr3_1:85169504-85169523 | Msa0382540:intron | 45.0% | |
| TGTGTGATTCAGTTGCTAGG+GGG | - | chr3_1:85169588-85169607 | None:intergenic | 45.0% | |
| GTGTGTGATTCAGTTGCTAG+GGG | - | chr3_1:85169589-85169608 | None:intergenic | 45.0% | |
| GGTGTGTGATTCAGTTGCTA+GGG | - | chr3_1:85169590-85169609 | None:intergenic | 45.0% | |
| TGGTGTGTGATTCAGTTGCT+AGG | - | chr3_1:85169591-85169610 | None:intergenic | 45.0% | |
| GGTAGGTATTCGAGAGACTT+TGG | + | chr3_1:85169696-85169715 | Msa0382540:intron | 45.0% | |
| GGACTCTCCTAATGCCAAAA+AGG | + | chr3_1:85169717-85169736 | Msa0382540:intron | 45.0% | |
| ! | GTATAGACTTGGGGCCTTTT+TGG | - | chr3_1:85169734-85169753 | None:intergenic | 45.0% |
| ! | GAAAGATGTGACGTGATGGA+TGG | - | chr3_1:85169931-85169950 | None:intergenic | 45.0% |
| AGGAGAAAGATGTGACGTGA+TGG | - | chr3_1:85169935-85169954 | None:intergenic | 45.0% | |
| CTAAGAGTTTGAGTAGGTCC+AGG | + | chr3_1:85170080-85170099 | Msa0382540:intron | 45.0% | |
| !! | CATAATTTGGTGGTGGATGC+TGG | + | chr3_1:85170310-85170329 | Msa0382540:intron | 45.0% |
| CAAGTTGTGGGTCTGTTCAA+TGG | - | chr3_1:85170380-85170399 | None:intergenic | 45.0% | |
| GGAGGAAATCTACTTGGTTG+AGG | + | chr3_1:85170485-85170504 | Msa0382540:intron | 45.0% | |
| AGAAGCTCCATATTCAGGCT+TGG | + | chr3_1:85170616-85170635 | Msa0382540:intron | 45.0% | |
| ATCGAAGCCAAGCCTGAATA+TGG | - | chr3_1:85170626-85170645 | None:intergenic | 45.0% | |
| TAATCAATCCCTCAGGAGAC+AGG | + | chr3_1:85170969-85170988 | Msa0382540:intron | 45.0% | |
| AATCAATCCCTCAGGAGACA+GGG | + | chr3_1:85170970-85170989 | Msa0382540:intron | 45.0% | |
| ! | CATAGAGAAGGTGCGTTGAA+GGG | - | chr3_1:85171123-85171142 | None:intergenic | 45.0% |
| ! | AACACTTCGGGTGCTTTGAA+GGG | + | chr3_1:85171169-85171188 | Msa0382540:intron | 45.0% |
| GTGTAAGCCCAAAGTGGAAT+CGG | + | chr3_1:85171194-85171213 | Msa0382540:intron | 45.0% | |
| TGTAAGCCCAAAGTGGAATC+GGG | + | chr3_1:85171195-85171214 | Msa0382540:intron | 45.0% | |
| GTGATAACCCGATTCCACTT+TGG | - | chr3_1:85171205-85171224 | None:intergenic | 45.0% | |
| CAAAATCAATCCCTCGAGAG+AGG | - | chr3_1:85171323-85171342 | None:intergenic | 45.0% | |
| ! | TCACATTTCCAAGGGTGTAG+TGG | - | chr3_1:85171552-85171571 | None:intergenic | 45.0% |
| TTCACACAAGTGGTCATCTG+TGG | - | chr3_1:85171858-85171877 | None:intergenic | 45.0% | |
| TCAAGATGGGGTCAGTTCAA+TGG | + | chr3_1:85171908-85171927 | Msa0382540:intron | 45.0% | |
| ACAAGAAGCTGCTAGTGGAA+TGG | - | chr3_1:85172085-85172104 | None:intergenic | 45.0% | |
| GGGAAGGCCTTGAAAGATTA+AGG | - | chr3_1:85172128-85172147 | None:intergenic | 45.0% | |
| TGTGAACCATGACTAAGGGA+AGG | - | chr3_1:85172144-85172163 | None:intergenic | 45.0% | |
| ! | AGGGCGTAAGATGTTTCTGA+GGG | - | chr3_1:85172194-85172213 | None:intergenic | 45.0% |
| ! | AGATTTGTAAGCTGGTTCCG+GGG | - | chr3_1:85172262-85172281 | None:intergenic | 45.0% |
| ! | GGTGGAACATTGGTAGTCTT+AGG | - | chr3_1:85172288-85172307 | None:intergenic | 45.0% |
| GGTATATGGCACACAAGGAA+TGG | - | chr3_1:85172333-85172352 | None:intergenic | 45.0% | |
| GAAGATGCTGAACATGACGT+TGG | + | chr3_1:85172832-85172851 | Msa0382540:CDS | 45.0% | |
| AGGAACCTTGTGCTAAGAAG+AGG | + | chr3_1:85173064-85173083 | Msa0382540:CDS | 45.0% | |
| TAACCTCCAACGTATGGACA+TGG | + | chr3_1:85173125-85173144 | Msa0382540:CDS | 45.0% | |
| ! | GAGGATAGAAACTGGTCTCA+AGG | + | chr3_1:85173203-85173222 | Msa0382540:CDS | 45.0% |
| AAGGAAGGACAAAATGGGGA+AGG | + | chr3_1:85173248-85173267 | Msa0382540:CDS | 45.0% | |
| CGCTTCACACCTATTTGGTT+CGG | + | chr3_1:85173525-85173544 | Msa0382540:intron | 45.0% | |
| !! | TCAGAAGTGCTGCATATGTC+AGG | + | chr3_1:85173817-85173836 | Msa0382540:intron | 45.0% |
| ACACAAGCAGAAGGGTCAAA+TGG | + | chr3_1:85173851-85173870 | Msa0382540:CDS | 45.0% | |
| CCTTGTCTGACCATCTTGAT+TGG | - | chr3_1:85174025-85174044 | None:intergenic | 45.0% | |
| CCAATCAAGATGGTCAGACA+AGG | + | chr3_1:85174022-85174041 | Msa0382540:CDS | 45.0% | |
| GATGGTCAGACAAGGAAAGA+TGG | + | chr3_1:85174030-85174049 | Msa0382540:CDS | 45.0% | |
| TCCACATCGTAGATATGGCT+GGG | - | chr3_1:85174164-85174183 | None:intergenic | 45.0% | |
| AGGAGTCCACATCGTAGATA+TGG | - | chr3_1:85174169-85174188 | None:intergenic | 45.0% | |
| AGAGGGAAGTGAAAGAGTGA+AGG | + | chr3_1:85174687-85174706 | Msa0382540:CDS | 45.0% | |
| !!! | ATAATCTAAAATTTAAAAAA+AGG | + | chr3_1:85173229-85173248 | Msa0382540:CDS | 5.0% |
| GTGTGCACTCCTACAAAACG+AGG | - | chr3_1:85167570-85167589 | None:intergenic | 50.0% | |
| TCTGCACCAATCGACAAGAG+AGG | + | chr3_1:85167687-85167706 | Msa0382540:CDS | 50.0% | |
| AGGAGAACAGGGATTGATGG+AGG | + | chr3_1:85167803-85167822 | Msa0382540:CDS | 50.0% | |
| ! | TAGGCTGGCTGTTGTCAACA+TGG | + | chr3_1:85168062-85168081 | Msa0382540:CDS | 50.0% |
| TGGCTGTTGTCAACATGGAC+TGG | + | chr3_1:85168067-85168086 | Msa0382540:CDS | 50.0% | |
| CGTTGAAGCCCAAACTCAGT+TGG | - | chr3_1:85168252-85168271 | None:intergenic | 50.0% | |
| CCTATCAGAAGAGCAGGATG+CGG | + | chr3_1:85168358-85168377 | Msa0382540:CDS | 50.0% | |
| CACGGCACGAGTCAATTTCA+TGG | - | chr3_1:85168396-85168415 | None:intergenic | 50.0% | |
| AGAACCTGCAGAGGCAGATA+AGG | - | chr3_1:85168951-85168970 | None:intergenic | 50.0% | |
| CAGCATGATAGAACCTGCAG+AGG | - | chr3_1:85168960-85168979 | None:intergenic | 50.0% | |
| CTGCAGGTTCTATCATGCTG+TGG | + | chr3_1:85168960-85168979 | Msa0382540:intron | 50.0% | |
| CAGGTTCTATCATGCTGTGG+TGG | + | chr3_1:85168963-85168982 | Msa0382540:intron | 50.0% | |
| GGGAATTCAAACAGGAGCCT+AGG | + | chr3_1:85169085-85169104 | Msa0382540:CDS | 50.0% | |
| GCCTAGGGATGTTGTGACAA+AGG | + | chr3_1:85169101-85169120 | Msa0382540:CDS | 50.0% | |
| !! | GCAGGTACCTGAGCATTGAA+AGG | - | chr3_1:85169186-85169205 | None:intergenic | 50.0% |
| TGAGTGGAAACTGCGGAGTT+AGG | - | chr3_1:85169550-85169569 | None:intergenic | 50.0% | |
| GAGTGAGTGAGTGGAAACTG+CGG | - | chr3_1:85169557-85169576 | None:intergenic | 50.0% | |
| GTATCTGGTGAGTGAGTGAG+TGG | - | chr3_1:85169566-85169585 | None:intergenic | 50.0% | |
| !! | TTCAGTTGCTAGGGGGTATC+TGG | - | chr3_1:85169581-85169600 | None:intergenic | 50.0% |
| GTCTCTCGAATACCTACCGT+GGG | - | chr3_1:85169694-85169713 | None:intergenic | 50.0% | |
| AGTCTCTCGAATACCTACCG+TGG | - | chr3_1:85169695-85169714 | None:intergenic | 50.0% | |
| !! | CTTGGGGCCTTTTTGGCATT+AGG | - | chr3_1:85169727-85169746 | None:intergenic | 50.0% |
| AAATGCTACTCGGCCCATGT+AGG | + | chr3_1:85170030-85170049 | Msa0382540:intron | 50.0% | |
| ACCAACCGAGCTACCTACAT+GGG | - | chr3_1:85170046-85170065 | None:intergenic | 50.0% | |
| !! | TAGCTCGGTTGGTGAGCTAA+GGG | + | chr3_1:85170053-85170072 | Msa0382540:intron | 50.0% |
| AGGAAAATGCTAGCGGGGAA+GGG | - | chr3_1:85170132-85170151 | None:intergenic | 50.0% | |
| AAGGAAAATGCTAGCGGGGA+AGG | - | chr3_1:85170133-85170152 | None:intergenic | 50.0% | |
| ! | TTGATGACCTGCATCCCAGT+CGG | + | chr3_1:85171087-85171106 | Msa0382540:intron | 50.0% |
| TGTAAATCCGACTGGGATGC+AGG | - | chr3_1:85171097-85171116 | None:intergenic | 50.0% | |
| ! | GCATAGAGAAGGTGCGTTGA+AGG | - | chr3_1:85171124-85171143 | None:intergenic | 50.0% |
| ! | CTTCAAAGCACCCGAAGTGT+TGG | - | chr3_1:85171170-85171189 | None:intergenic | 50.0% |
| CAACACTTCGGGTGCTTTGA+AGG | + | chr3_1:85171168-85171187 | Msa0382540:intron | 50.0% | |
| ! | AGGGAAGTGTAAGCCCAAAG+TGG | + | chr3_1:85171188-85171207 | Msa0382540:intron | 50.0% |
| GGAAAGATCCACTACACCCT+TGG | + | chr3_1:85171541-85171560 | Msa0382540:intron | 50.0% | |
| TCAAGGCCTTCCCTTAGTCA+TGG | + | chr3_1:85172135-85172154 | Msa0382540:intron | 50.0% | |
| ! | GAGGGCGTAAGATGTTTCTG+AGG | - | chr3_1:85172195-85172214 | None:intergenic | 50.0% |
| ACATGACGTTGGCCAAGAGA+TGG | + | chr3_1:85172843-85172862 | Msa0382540:CDS | 50.0% | |
| ATGGAGGTGACCTTCCATTC+AGG | + | chr3_1:85172862-85172881 | Msa0382540:CDS | 50.0% | |
| GGTGACCTTCCATTCAGGAT+TGG | + | chr3_1:85172867-85172886 | Msa0382540:CDS | 50.0% | |
| !! | CAGTTTGGGAAGCATTTCGG+AGG | + | chr3_1:85172938-85172957 | Msa0382540:CDS | 50.0% |
| !! | GGGAAGCATTTCGGAGGAAA+AGG | + | chr3_1:85172944-85172963 | Msa0382540:CDS | 50.0% |
| CAACCATGTCCATACGTTGG+AGG | - | chr3_1:85173131-85173150 | None:intergenic | 50.0% | |
| CAGCAACCATGTCCATACGT+TGG | - | chr3_1:85173134-85173153 | None:intergenic | 50.0% | |
| CAGCTAGCACACAAGCAGAA+GGG | + | chr3_1:85173843-85173862 | Msa0382540:CDS | 50.0% | |
| ATGGCTGGGGCATAATAGCA+TGG | - | chr3_1:85174150-85174169 | None:intergenic | 50.0% | |
| CCACATCGTAGATATGGCTG+GGG | - | chr3_1:85174163-85174182 | None:intergenic | 50.0% | |
| GTCCACATCGTAGATATGGC+TGG | - | chr3_1:85174165-85174184 | None:intergenic | 50.0% | |
| GAGTGAAGGATCAGACTGAG+AGG | + | chr3_1:85174701-85174720 | Msa0382540:CDS | 50.0% | |
| AAGGATCAGACTGAGAGGAG+AGG | + | chr3_1:85174706-85174725 | Msa0382540:CDS | 50.0% | |
| TCAGACTGAGAGGAGAGGAA+TGG | + | chr3_1:85174711-85174730 | Msa0382540:CDS | 50.0% | |
| !! | CACAGACCCTCGTTTTCGAG+AGG | + | chr3_1:85167587-85167606 | Msa0382540:CDS | 55.0% |
| CACCAATCGACAAGAGAGGC+AGG | + | chr3_1:85167691-85167710 | Msa0382540:CDS | 55.0% | |
| TGCGTGCCTATCAGAAGAGC+AGG | + | chr3_1:85168352-85168371 | Msa0382540:CDS | 55.0% | |
| CCGCATCCTGCTCTTCTGAT+AGG | - | chr3_1:85168361-85168380 | None:intergenic | 55.0% | |
| CCATTCAGGCCAGTGTGTCA+CGG | - | chr3_1:85168414-85168433 | None:intergenic | 55.0% | |
| CACCAACCGAGCTACCTACA+TGG | - | chr3_1:85170047-85170066 | None:intergenic | 55.0% | |
| !! | GTAGCTCGGTTGGTGAGCTA+AGG | + | chr3_1:85170052-85170071 | Msa0382540:intron | 55.0% |
| GGAAAATGCTAGCGGGGAAG+GGG | - | chr3_1:85170131-85170150 | None:intergenic | 55.0% | |
| ! | AGGTTGTGGAGCGTTTGGCT+AGG | - | chr3_1:85171050-85171069 | None:intergenic | 55.0% |
| AGCCAAACGCTCCACAACCT+TGG | + | chr3_1:85171050-85171069 | Msa0382540:intron | 55.0% | |
| ! | CACCAAGGTTGTGGAGCGTT+TGG | - | chr3_1:85171055-85171074 | None:intergenic | 55.0% |
| TCTGCCTTTCCCTCTCTCGA+GGG | + | chr3_1:85171310-85171329 | Msa0382540:intron | 55.0% | |
| CAATCCCTCGAGAGAGGGAA+AGG | - | chr3_1:85171317-85171336 | None:intergenic | 55.0% | |
| TGACGTTGGCCAAGAGATGG+AGG | + | chr3_1:85172846-85172865 | Msa0382540:CDS | 55.0% | |
| GGAAGGTCACCTCCATCTCT+TGG | - | chr3_1:85172858-85172877 | None:intergenic | 55.0% | |
| GCAGCTAGCACACAAGCAGA+AGG | + | chr3_1:85173842-85173861 | Msa0382540:CDS | 55.0% | |
| CCCCAGCCATATCTACGATG+TGG | + | chr3_1:85174160-85174179 | Msa0382540:intron | 55.0% | |
| GGCCTGCCTCTCTTGTCGAT+TGG | - | chr3_1:85167696-85167715 | None:intergenic | 60.0% | |
| TGACTCGTGCCGTGACACAC+TGG | + | chr3_1:85168402-85168421 | Msa0382540:intron | 60.0% | |
| ! | CCGTGACACACTGGCCTGAA+TGG | + | chr3_1:85168411-85168430 | Msa0382540:intron | 60.0% |
| CTCGGCCCATGTAGGTAGCT+CGG | + | chr3_1:85170038-85170057 | Msa0382540:intron | 60.0% | |
| GCCCATGTAGGTAGCTCGGT+TGG | + | chr3_1:85170042-85170061 | Msa0382540:intron | 60.0% | |
| TGGCTCTCCCTGTCTCCTGA+GGG | - | chr3_1:85170980-85170999 | None:intergenic | 60.0% | |
| ATGGCTCTCCCTGTCTCCTG+AGG | - | chr3_1:85170981-85171000 | None:intergenic | 60.0% | |
| CTCTGCCTTTCCCTCTCTCG+AGG | + | chr3_1:85171309-85171328 | Msa0382540:intron | 60.0% | |
| ! | TGGTGGATGCTGCTCCAGCA+TGG | - | chr3_1:85171978-85171997 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 85167498 | 85174744 | 85167498 | ID=Msa0382540;Name=Msa0382540 |
| chr3_1 | mRNA | 85167498 | 85174744 | 85167498 | ID=Msa0382540-mRNA-1;Parent=Msa0382540;Name=Msa0382540-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.85|0.62|0.87|1|1|8|0|678 |
| chr3_1 | exon | 85167498 | 85167920 | 85167498 | ID=Msa0382540-mRNA-1:exon:22263;Parent=Msa0382540-mRNA-1 |
| chr3_1 | exon | 85168024 | 85168101 | 85168024 | ID=Msa0382540-mRNA-1:exon:22264;Parent=Msa0382540-mRNA-1 |
| chr3_1 | exon | 85168177 | 85168379 | 85168177 | ID=Msa0382540-mRNA-1:exon:22265;Parent=Msa0382540-mRNA-1 |
| chr3_1 | exon | 85168966 | 85169122 | 85168966 | ID=Msa0382540-mRNA-1:exon:22266;Parent=Msa0382540-mRNA-1 |
| chr3_1 | exon | 85169198 | 85169326 | 85169198 | ID=Msa0382540-mRNA-1:exon:22267;Parent=Msa0382540-mRNA-1 |
| chr3_1 | exon | 85172688 | 85173391 | 85172688 | ID=Msa0382540-mRNA-1:exon:22268;Parent=Msa0382540-mRNA-1 |
| chr3_1 | exon | 85173821 | 85174068 | 85173821 | ID=Msa0382540-mRNA-1:exon:22269;Parent=Msa0382540-mRNA-1 |
| chr3_1 | exon | 85174650 | 85174744 | 85174650 | ID=Msa0382540-mRNA-1:exon:22270;Parent=Msa0382540-mRNA-1 |
| chr3_1 | CDS | 85167498 | 85167920 | 85167498 | ID=Msa0382540-mRNA-1:cds;Parent=Msa0382540-mRNA-1 |
| chr3_1 | CDS | 85168024 | 85168101 | 85168024 | ID=Msa0382540-mRNA-1:cds;Parent=Msa0382540-mRNA-1 |
| chr3_1 | CDS | 85168177 | 85168379 | 85168177 | ID=Msa0382540-mRNA-1:cds;Parent=Msa0382540-mRNA-1 |
| chr3_1 | CDS | 85168966 | 85169122 | 85168966 | ID=Msa0382540-mRNA-1:cds;Parent=Msa0382540-mRNA-1 |
| chr3_1 | CDS | 85169198 | 85169326 | 85169198 | ID=Msa0382540-mRNA-1:cds;Parent=Msa0382540-mRNA-1 |
| chr3_1 | CDS | 85172688 | 85173391 | 85172688 | ID=Msa0382540-mRNA-1:cds;Parent=Msa0382540-mRNA-1 |
| chr3_1 | CDS | 85173821 | 85174068 | 85173821 | ID=Msa0382540-mRNA-1:cds;Parent=Msa0382540-mRNA-1 |
| chr3_1 | CDS | 85174650 | 85174744 | 85174650 | ID=Msa0382540-mRNA-1:cds;Parent=Msa0382540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
