Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384110 | KEH36159.1 | 93.514 | 370 | 21 | 1 | 1 | 367 | 1 | 370 | 0.0 | 662 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384110 | sp|Q92383|MAG1_SCHPO | 29.834 | 181 | 126 | 1 | 136 | 315 | 32 | 212 | 9.34e-26 | 106 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384110 | A0A072V291 | 93.514 | 370 | 21 | 1 | 1 | 367 | 1 | 370 | 0.0 | 662 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0384110 | Msa0434860 | 0.917576 | 4.486353e-86 | -8.615850e-47 |
| Msa0384110 | Msa0522850 | 0.892702 | 1.244265e-74 | -8.615850e-47 |
| Msa0384110 | Msa0591830 | 0.800032 | 1.742965e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384110 | MtrunA17_Chr3g0141611 | 93.514 | 370 | 21 | 1 | 1 | 367 | 1 | 370 | 0.0 | 661 |
| Msa0384110 | MtrunA17_Chr5g0404201 | 55.399 | 213 | 93 | 1 | 111 | 321 | 59 | 271 | 5.17e-86 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384110 | AT1G19480.2 | 61.972 | 355 | 115 | 6 | 15 | 367 | 41 | 377 | 4.12e-146 | 418 |
| Msa0384110 | AT1G19480.1 | 61.972 | 355 | 115 | 6 | 15 | 367 | 41 | 377 | 4.39e-146 | 419 |
| Msa0384110 | AT1G75230.2 | 60.789 | 380 | 114 | 5 | 6 | 367 | 24 | 386 | 8.25e-146 | 418 |
| Msa0384110 | AT1G75230.1 | 60.789 | 380 | 114 | 5 | 6 | 367 | 24 | 386 | 8.96e-146 | 418 |
| Msa0384110 | AT3G50880.1 | 54.152 | 277 | 90 | 4 | 46 | 320 | 29 | 270 | 1.92e-99 | 296 |
Find 113 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCAACAGCTTCGTCAAAT+TGG | 0.169969 | 3_1:-87216666 | Msa0384110:CDS |
| TGGTGGAATTGGTTGGCTTT+AGG | 0.180405 | 3_1:+87217027 | None:intergenic |
| CTTCGTCAAATTGGGGTTTC+TGG | 0.192533 | 3_1:-87216657 | Msa0384110:CDS |
| TGATTCCGCTATTGTAAATA+TGG | 0.193076 | 3_1:-87216577 | Msa0384110:CDS |
| TATGAATAACATGTTTAATA+TGG | 0.206711 | 3_1:-87216184 | Msa0384110:CDS |
| ACTATGCTTACTATGGTTAA+TGG | 0.221809 | 3_1:-87216537 | Msa0384110:CDS |
| GGTGGAATTGGTTGGCTTTA+GGG | 0.224070 | 3_1:+87217028 | None:intergenic |
| CTCAACAGCTTCGTCAAATT+GGG | 0.256135 | 3_1:-87216665 | Msa0384110:CDS |
| GCTGCTGTTGCCACTGGCAA+TGG | 0.292196 | 3_1:-87216282 | Msa0384110:CDS |
| AGCTAGTTATCTTCATGATT+TGG | 0.297314 | 3_1:-87216628 | Msa0384110:CDS |
| TTATTCATAGGATCCATAAT+TGG | 0.299949 | 3_1:+87216198 | None:intergenic |
| CTATGCTTACTATGGTTAAT+GGG | 0.309757 | 3_1:-87216536 | Msa0384110:CDS |
| TGGTTAATGGGATTGGTTCT+TGG | 0.310260 | 3_1:-87216524 | Msa0384110:CDS |
| GCATTCACAACAACCAATTA+TGG | 0.336085 | 3_1:-87216211 | Msa0384110:CDS |
| TTGGGTCGGGTGAGACCTTT+CGG | 0.350316 | 3_1:+87217075 | None:intergenic |
| ATATTAAACATGTTATTCAT+AGG | 0.364793 | 3_1:+87216186 | None:intergenic |
| CTTATCGTTCGGTTGCTTCA+TGG | 0.372094 | 3_1:-87216350 | Msa0384110:CDS |
| AGCAATAAACCGGGTATAGA+TGG | 0.372851 | 3_1:+87216740 | None:intergenic |
| ATGAATAACATGTTTAATAT+GGG | 0.373528 | 3_1:-87216183 | Msa0384110:CDS |
| CTTACTATGGTTAATGGGAT+TGG | 0.385045 | 3_1:-87216531 | Msa0384110:CDS |
| ATTGAGATTCGGAGGTTGTT+GGG | 0.390972 | 3_1:+87217057 | None:intergenic |
| GGTACAAGATACTACGGGTT+AGG | 0.395255 | 3_1:+87216790 | None:intergenic |
| GATTCGGAGGTTGTTGGGTC+GGG | 0.407111 | 3_1:+87217062 | None:intergenic |
| TGGCTTGCAGCAGCATGAGC+TGG | 0.409325 | 3_1:-87216262 | Msa0384110:CDS |
| CGAACACCAAGATCATTAAT+CGG | 0.413843 | 3_1:+87216453 | None:intergenic |
| GTTAGGGCAAGAACATTATC+AGG | 0.416123 | 3_1:+87216690 | None:intergenic |
| GACGAAGCTGTTGAGCAGTT+AGG | 0.418751 | 3_1:+87216673 | None:intergenic |
| ACCCCTTGTGGTTGTGGCTG+AGG | 0.426942 | 3_1:+87217236 | None:intergenic |
| ACGAAGCTGTTGAGCAGTTA+GGG | 0.427388 | 3_1:+87216674 | None:intergenic |
| CGATTAATGATCTTGGTGTT+CGG | 0.428190 | 3_1:-87216452 | Msa0384110:CDS |
| GTTCTTCCGATTAATGATCT+TGG | 0.429181 | 3_1:-87216459 | Msa0384110:CDS |
| ATGATCTTGGTGTTCGGAAA+GGG | 0.431899 | 3_1:-87216446 | Msa0384110:CDS |
| TAGGGTTTCCGATTGAGATT+CGG | 0.437075 | 3_1:+87217046 | None:intergenic |
| ACTGCTGCTGCTGTTGCCAC+TGG | 0.440661 | 3_1:-87216288 | Msa0384110:CDS |
| ATTGCTCAGTTCGGATTCTA+CGG | 0.445751 | 3_1:+87217154 | None:intergenic |
| CCGGCGGTGGTGGAATTGGT+TGG | 0.451771 | 3_1:+87217020 | None:intergenic |
| GCTCTATGCGGCGGTGAAGC+TGG | 0.455065 | 3_1:-87216720 | Msa0384110:CDS |
| TCATTAATCGGAAGAACATC+AGG | 0.455995 | 3_1:+87216465 | None:intergenic |
| CGGCTTTAAAAGCGAGTTGT+TGG | 0.456722 | 3_1:+87216769 | None:intergenic |
| TTAGGGCAAGGAATGGAGTC+TGG | 0.460253 | 3_1:+87216808 | None:intergenic |
| TGATGGAACATTGCTCAGTT+CGG | 0.471327 | 3_1:+87217145 | None:intergenic |
| AGATTCGGAGGTTGTTGGGT+CGG | 0.473762 | 3_1:+87217061 | None:intergenic |
| GAAGAAACCCCTTGTGGTTG+TGG | 0.474078 | 3_1:+87217230 | None:intergenic |
| GATTGAGATTCGGAGGTTGT+TGG | 0.484783 | 3_1:+87217056 | None:intergenic |
| AACAACCTCCGAATCTCAAT+CGG | 0.488511 | 3_1:-87217054 | Msa0384110:CDS |
| CGGTTGCTTCATGGTATATG+TGG | 0.491099 | 3_1:-87216341 | Msa0384110:CDS |
| GACGGAGTCGACAGCGGTGG+TGG | 0.492448 | 3_1:+87217190 | None:intergenic |
| CGCCGCATAGAGCAATAAAC+CGG | 0.498184 | 3_1:+87216730 | None:intergenic |
| GTGGAGGTTTGTTGAAGCGA+AGG | 0.503950 | 3_1:-87216322 | Msa0384110:CDS |
| GAAGTGGAAGCCTTATCGTT+CGG | 0.505451 | 3_1:-87216361 | Msa0384110:CDS |
| GCTGCTGCTGCTGTTGATGG+TGG | 0.507705 | 3_1:+87216238 | None:intergenic |
| TGGAGGTTTGTTGAAGCGAA+GGG | 0.516701 | 3_1:-87216321 | Msa0384110:CDS |
| CTTGCCTCGGCCATCTCAGA+TGG | 0.518209 | 3_1:-87216397 | Msa0384110:CDS |
| ATCATCCATATTTACAATAG+CGG | 0.520609 | 3_1:+87216572 | None:intergenic |
| ACAATTGAGGTTCGTTGTTG+TGG | 0.522531 | 3_1:+87216960 | None:intergenic |
| TTGCTCAGTTCGGATTCTAC+GGG | 0.522751 | 3_1:+87217155 | None:intergenic |
| GTTATCTTCATGATTTGGCT+AGG | 0.524825 | 3_1:-87216623 | Msa0384110:CDS |
| GCAACAGCAGCAGCAGTTGA+AGG | 0.531886 | 3_1:+87216294 | None:intergenic |
| GGAGTCGACAGCGGTGGTGG+CGG | 0.536044 | 3_1:+87217193 | None:intergenic |
| AATGATCTTGGTGTTCGGAA+AGG | 0.537519 | 3_1:-87216447 | Msa0384110:CDS |
| CATGAAGCAACCGAACGATA+AGG | 0.537784 | 3_1:+87216351 | None:intergenic |
| GTGCGAAGGTGAAGTTGAGA+TGG | 0.543548 | 3_1:-87216910 | Msa0384110:CDS |
| TGGCTAGGAAGTATCAGAAT+GGG | 0.545890 | 3_1:-87216608 | Msa0384110:CDS |
| GTACAAGATACTACGGGTTA+GGG | 0.549172 | 3_1:+87216791 | None:intergenic |
| GGTGGCGGAGATTGTGTTGT+CGG | 0.551572 | 3_1:+87217208 | None:intergenic |
| GTTGTTGGTACAAGATACTA+CGG | 0.551894 | 3_1:+87216784 | None:intergenic |
| TTGCTTCATGGTATATGTGG+AGG | 0.557460 | 3_1:-87216338 | Msa0384110:CDS |
| TCGGATCTTACGAGGACGGA+GGG | 0.560273 | 3_1:+87217094 | None:intergenic |
| TTGGCTAGGAAGTATCAGAA+TGG | 0.561670 | 3_1:-87216609 | Msa0384110:CDS |
| TTGTTCCGAAAATTGTAGCT+AGG | 0.562008 | 3_1:-87216941 | Msa0384110:CDS |
| ATAATCTAGATGACTTGCCT+CGG | 0.562183 | 3_1:-87216410 | Msa0384110:CDS |
| TCAACAGCTTCGTCAAATTG+GGG | 0.564716 | 3_1:-87216664 | Msa0384110:CDS |
| CCGGGTATAGATGGAAGTAC+CGG | 0.564853 | 3_1:+87216749 | None:intergenic |
| TGATCTTGGTGTTCGGAAAG+GGG | 0.566268 | 3_1:-87216445 | Msa0384110:CDS |
| CCGGTACTTCCATCTATACC+CGG | 0.576685 | 3_1:-87216749 | Msa0384110:CDS |
| TGGATCAATTATGTGAGAAG+TGG | 0.576910 | 3_1:-87216377 | Msa0384110:CDS |
| CATAATTGATCCATCTGAGA+TGG | 0.576912 | 3_1:+87216387 | None:intergenic |
| CTACGGGTTAGGGCAAGGAA+TGG | 0.578814 | 3_1:+87216801 | None:intergenic |
| CAACGGACGGAACAACAAAA+CGG | 0.582839 | 3_1:-87216991 | Msa0384110:CDS |
| ATTGAGGTTCGTTGTTGTGG+TGG | 0.584929 | 3_1:+87216963 | None:intergenic |
| GCTAGGTCACTTTCGTGCGA+AGG | 0.586188 | 3_1:-87216924 | Msa0384110:CDS |
| AGATACTACGGGTTAGGGCA+AGG | 0.587198 | 3_1:+87216796 | None:intergenic |
| CCAACCAATTCCACCACCGC+CGG | 0.587677 | 3_1:-87217020 | Msa0384110:CDS |
| TACGGGGATAATAGTTTCGA+CGG | 0.589338 | 3_1:+87217172 | None:intergenic |
| CCGCCGGAAAATCCAACGGA+CGG | 0.590648 | 3_1:-87217004 | Msa0384110:CDS |
| CGATGAGAGGTGATAAGAGT+GGG | 0.592687 | 3_1:+87216862 | None:intergenic |
| CAACCTCAGCCACAACCACA+AGG | 0.593857 | 3_1:-87217239 | Msa0384110:CDS |
| TGAATAACATGTTTAATATG+GGG | 0.599833 | 3_1:-87216182 | Msa0384110:CDS |
| GGTTTCCGATTGAGATTCGG+AGG | 0.602513 | 3_1:+87217049 | None:intergenic |
| ACCTCAGCCACAACCACAAG+GGG | 0.604739 | 3_1:-87217237 | Msa0384110:CDS |
| TGATCCATCTGAGATGGCCG+AGG | 0.610828 | 3_1:+87216393 | None:intergenic |
| CTGCTGCAAGCCATTGCCAG+TGG | 0.628730 | 3_1:+87216272 | None:intergenic |
| GAGACCTTTCGGATCTTACG+AGG | 0.632398 | 3_1:+87217086 | None:intergenic |
| AGAGTGGGTCTGCGGTACGA+AGG | 0.640787 | 3_1:+87216877 | None:intergenic |
| TTCGGATCTTACGAGGACGG+AGG | 0.648070 | 3_1:+87217093 | None:intergenic |
| CGGTTTATTGCTCTATGCGG+CGG | 0.648731 | 3_1:-87216729 | Msa0384110:CDS |
| TTGTTGGTACAAGATACTAC+GGG | 0.649339 | 3_1:+87216785 | None:intergenic |
| AACCTCAGCCACAACCACAA+GGG | 0.649650 | 3_1:-87217238 | Msa0384110:CDS |
| AGGTGATAAGAGTGGGTCTG+CGG | 0.654092 | 3_1:+87216869 | None:intergenic |
| AGTTTCGACGGAGTCGACAG+CGG | 0.661441 | 3_1:+87217184 | None:intergenic |
| CCGTCCTCGTAAGATCCGAA+AGG | 0.662065 | 3_1:-87217090 | Msa0384110:CDS |
| ACCACCGCCGGAAAATCCAA+CGG | 0.663130 | 3_1:-87217008 | Msa0384110:CDS |
| CCTTTCGGATCTTACGAGGA+CGG | 0.664581 | 3_1:+87217090 | None:intergenic |
| TTCGACGGAGTCGACAGCGG+TGG | 0.669382 | 3_1:+87217187 | None:intergenic |
| TGGAAATTATCAAACGTAGG+TGG | 0.669577 | 3_1:+87216828 | None:intergenic |
| TGCTCAGTTCGGATTCTACG+GGG | 0.671223 | 3_1:+87217156 | None:intergenic |
| TCGATGAGAGGTGATAAGAG+TGG | 0.675819 | 3_1:+87216861 | None:intergenic |
| ACCCGGTTTATTGCTCTATG+CGG | 0.679051 | 3_1:-87216732 | Msa0384110:CDS |
| CGGATCTTACGAGGACGGAG+GGG | 0.706604 | 3_1:+87217095 | None:intergenic |
| GGTTGATGAATGTCGATGAG+AGG | 0.708425 | 3_1:+87216849 | None:intergenic |
| TTGTCGGAAGAAACCCCTTG+TGG | 0.713634 | 3_1:+87217224 | None:intergenic |
| GCCGCATAGAGCAATAAACC+GGG | 0.722126 | 3_1:+87216731 | None:intergenic |
| GTCTGGAAATTATCAAACGT+AGG | 0.725407 | 3_1:+87216825 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAACATGTTATTCAT+AGG | + | chr3_1:87217256-87217275 | None:intergenic | 15.0% |
| !! | TATGAATAACATGTTTAATA+TGG | - | chr3_1:87217255-87217274 | Msa0384110:CDS | 15.0% |
| !! | ATGAATAACATGTTTAATAT+GGG | - | chr3_1:87217256-87217275 | Msa0384110:CDS | 15.0% |
| !! | ATATTAAACATGTTATTCAT+AGG | + | chr3_1:87217256-87217275 | None:intergenic | 15.0% |
| !! | TATGAATAACATGTTTAATA+TGG | - | chr3_1:87217255-87217274 | Msa0384110:CDS | 15.0% |
| !! | ATGAATAACATGTTTAATAT+GGG | - | chr3_1:87217256-87217275 | Msa0384110:CDS | 15.0% |
| !! | TGAATAACATGTTTAATATG+GGG | - | chr3_1:87217257-87217276 | Msa0384110:CDS | 20.0% |
| !! | TGAATAACATGTTTAATATG+GGG | - | chr3_1:87217257-87217276 | Msa0384110:CDS | 20.0% |
| ! | ATCATCCATATTTACAATAG+CGG | + | chr3_1:87216870-87216889 | None:intergenic | 25.0% |
| ! | TTATTCATAGGATCCATAAT+TGG | + | chr3_1:87217244-87217263 | None:intergenic | 25.0% |
| ! | ATCATCCATATTTACAATAG+CGG | + | chr3_1:87216870-87216889 | None:intergenic | 25.0% |
| ! | TTATTCATAGGATCCATAAT+TGG | + | chr3_1:87217244-87217263 | None:intergenic | 25.0% |
| ! | TACAATTTTCGGAACAATTG+AGG | + | chr3_1:87216495-87216514 | None:intergenic | 30.0% |
| AGCTAGTTATCTTCATGATT+TGG | - | chr3_1:87216811-87216830 | Msa0384110:CDS | 30.0% | |
| TGATTCCGCTATTGTAAATA+TGG | - | chr3_1:87216862-87216881 | Msa0384110:CDS | 30.0% | |
| ACTATGCTTACTATGGTTAA+TGG | - | chr3_1:87216902-87216921 | Msa0384110:CDS | 30.0% | |
| CTATGCTTACTATGGTTAAT+GGG | - | chr3_1:87216903-87216922 | Msa0384110:CDS | 30.0% | |
| ! | TACAATTTTCGGAACAATTG+AGG | + | chr3_1:87216495-87216514 | None:intergenic | 30.0% |
| AGCTAGTTATCTTCATGATT+TGG | - | chr3_1:87216811-87216830 | Msa0384110:CDS | 30.0% | |
| TGATTCCGCTATTGTAAATA+TGG | - | chr3_1:87216862-87216881 | Msa0384110:CDS | 30.0% | |
| ACTATGCTTACTATGGTTAA+TGG | - | chr3_1:87216902-87216921 | Msa0384110:CDS | 30.0% | |
| CTATGCTTACTATGGTTAAT+GGG | - | chr3_1:87216903-87216922 | Msa0384110:CDS | 30.0% | |
| TTGTTCCGAAAATTGTAGCT+AGG | - | chr3_1:87216498-87216517 | Msa0384110:CDS | 35.0% | |
| ! | AGTGACCTAGCTACAATTTT+CGG | + | chr3_1:87216506-87216525 | None:intergenic | 35.0% |
| TGGAAATTATCAAACGTAGG+TGG | + | chr3_1:87216614-87216633 | None:intergenic | 35.0% | |
| GTCTGGAAATTATCAAACGT+AGG | + | chr3_1:87216617-87216636 | None:intergenic | 35.0% | |
| TTGTTGGTACAAGATACTAC+GGG | + | chr3_1:87216657-87216676 | None:intergenic | 35.0% | |
| GTTGTTGGTACAAGATACTA+CGG | + | chr3_1:87216658-87216677 | None:intergenic | 35.0% | |
| ! | GTTATCTTCATGATTTGGCT+AGG | - | chr3_1:87216816-87216835 | Msa0384110:CDS | 35.0% |
| ! | GCTTTTCACTATGCTTACTA+TGG | - | chr3_1:87216895-87216914 | Msa0384110:CDS | 35.0% |
| CTTACTATGGTTAATGGGAT+TGG | - | chr3_1:87216908-87216927 | Msa0384110:CDS | 35.0% | |
| TCATTAATCGGAAGAACATC+AGG | + | chr3_1:87216977-87216996 | None:intergenic | 35.0% | |
| GTTCTTCCGATTAATGATCT+TGG | - | chr3_1:87216980-87216999 | Msa0384110:CDS | 35.0% | |
| CGAACACCAAGATCATTAAT+CGG | + | chr3_1:87216989-87217008 | None:intergenic | 35.0% | |
| !! | CGATTAATGATCTTGGTGTT+CGG | - | chr3_1:87216987-87217006 | Msa0384110:CDS | 35.0% |
| ! | ATAATCTAGATGACTTGCCT+CGG | - | chr3_1:87217029-87217048 | Msa0384110:CDS | 35.0% |
| CATAATTGATCCATCTGAGA+TGG | + | chr3_1:87217055-87217074 | None:intergenic | 35.0% | |
| TGGATCAATTATGTGAGAAG+TGG | - | chr3_1:87217062-87217081 | Msa0384110:CDS | 35.0% | |
| GCATTCACAACAACCAATTA+TGG | - | chr3_1:87217228-87217247 | Msa0384110:CDS | 35.0% | |
| TTGTTCCGAAAATTGTAGCT+AGG | - | chr3_1:87216498-87216517 | Msa0384110:CDS | 35.0% | |
| ! | AGTGACCTAGCTACAATTTT+CGG | + | chr3_1:87216506-87216525 | None:intergenic | 35.0% |
| TGGAAATTATCAAACGTAGG+TGG | + | chr3_1:87216614-87216633 | None:intergenic | 35.0% | |
| GTCTGGAAATTATCAAACGT+AGG | + | chr3_1:87216617-87216636 | None:intergenic | 35.0% | |
| TTGTTGGTACAAGATACTAC+GGG | + | chr3_1:87216657-87216676 | None:intergenic | 35.0% | |
| GTTGTTGGTACAAGATACTA+CGG | + | chr3_1:87216658-87216677 | None:intergenic | 35.0% | |
| ! | GTTATCTTCATGATTTGGCT+AGG | - | chr3_1:87216816-87216835 | Msa0384110:CDS | 35.0% |
| ! | GCTTTTCACTATGCTTACTA+TGG | - | chr3_1:87216895-87216914 | Msa0384110:CDS | 35.0% |
| CTTACTATGGTTAATGGGAT+TGG | - | chr3_1:87216908-87216927 | Msa0384110:CDS | 35.0% | |
| TCATTAATCGGAAGAACATC+AGG | + | chr3_1:87216977-87216996 | None:intergenic | 35.0% | |
| GTTCTTCCGATTAATGATCT+TGG | - | chr3_1:87216980-87216999 | Msa0384110:CDS | 35.0% | |
| CGAACACCAAGATCATTAAT+CGG | + | chr3_1:87216989-87217008 | None:intergenic | 35.0% | |
| !! | CGATTAATGATCTTGGTGTT+CGG | - | chr3_1:87216987-87217006 | Msa0384110:CDS | 35.0% |
| ! | ATAATCTAGATGACTTGCCT+CGG | - | chr3_1:87217029-87217048 | Msa0384110:CDS | 35.0% |
| CATAATTGATCCATCTGAGA+TGG | + | chr3_1:87217055-87217074 | None:intergenic | 35.0% | |
| TGGATCAATTATGTGAGAAG+TGG | - | chr3_1:87217062-87217081 | Msa0384110:CDS | 35.0% | |
| GCATTCACAACAACCAATTA+TGG | - | chr3_1:87217228-87217247 | Msa0384110:CDS | 35.0% | |
| TACGGGGATAATAGTTTCGA+CGG | + | chr3_1:87216270-87216289 | None:intergenic | 40.0% | |
| ATTGCTCAGTTCGGATTCTA+CGG | + | chr3_1:87216288-87216307 | None:intergenic | 40.0% | |
| TGATGGAACATTGCTCAGTT+CGG | + | chr3_1:87216297-87216316 | None:intergenic | 40.0% | |
| ATTGAGATTCGGAGGTTGTT+GGG | + | chr3_1:87216385-87216404 | None:intergenic | 40.0% | |
| AACAACCTCCGAATCTCAAT+CGG | - | chr3_1:87216385-87216404 | Msa0384110:CDS | 40.0% | |
| TAGGGTTTCCGATTGAGATT+CGG | + | chr3_1:87216396-87216415 | None:intergenic | 40.0% | |
| ACAATTGAGGTTCGTTGTTG+TGG | + | chr3_1:87216482-87216501 | None:intergenic | 40.0% | |
| ! | GTACAAGATACTACGGGTTA+GGG | + | chr3_1:87216651-87216670 | None:intergenic | 40.0% |
| !!! | CAACAACTCGCTTTTAAAGC+CGG | - | chr3_1:87216671-87216690 | Msa0384110:CDS | 40.0% |
| AGCAATAAACCGGGTATAGA+TGG | + | chr3_1:87216702-87216721 | None:intergenic | 40.0% | |
| GTTAGGGCAAGAACATTATC+AGG | + | chr3_1:87216752-87216771 | None:intergenic | 40.0% | |
| CTCAACAGCTTCGTCAAATT+GGG | - | chr3_1:87216774-87216793 | Msa0384110:CDS | 40.0% | |
| TCAACAGCTTCGTCAAATTG+GGG | - | chr3_1:87216775-87216794 | Msa0384110:CDS | 40.0% | |
| !! | TTGGCTAGGAAGTATCAGAA+TGG | - | chr3_1:87216830-87216849 | Msa0384110:CDS | 40.0% |
| !! | TGGCTAGGAAGTATCAGAAT+GGG | - | chr3_1:87216831-87216850 | Msa0384110:CDS | 40.0% |
| !! | TGGTTAATGGGATTGGTTCT+TGG | - | chr3_1:87216915-87216934 | Msa0384110:CDS | 40.0% |
| !! | AATGATCTTGGTGTTCGGAA+AGG | - | chr3_1:87216992-87217011 | Msa0384110:CDS | 40.0% |
| !! | ATGATCTTGGTGTTCGGAAA+GGG | - | chr3_1:87216993-87217012 | Msa0384110:CDS | 40.0% |
| TTGCTTCATGGTATATGTGG+AGG | - | chr3_1:87217101-87217120 | Msa0384110:CDS | 40.0% | |
| TACGGGGATAATAGTTTCGA+CGG | + | chr3_1:87216270-87216289 | None:intergenic | 40.0% | |
| ATTGCTCAGTTCGGATTCTA+CGG | + | chr3_1:87216288-87216307 | None:intergenic | 40.0% | |
| TGATGGAACATTGCTCAGTT+CGG | + | chr3_1:87216297-87216316 | None:intergenic | 40.0% | |
| ATTGAGATTCGGAGGTTGTT+GGG | + | chr3_1:87216385-87216404 | None:intergenic | 40.0% | |
| AACAACCTCCGAATCTCAAT+CGG | - | chr3_1:87216385-87216404 | Msa0384110:CDS | 40.0% | |
| TAGGGTTTCCGATTGAGATT+CGG | + | chr3_1:87216396-87216415 | None:intergenic | 40.0% | |
| ACAATTGAGGTTCGTTGTTG+TGG | + | chr3_1:87216482-87216501 | None:intergenic | 40.0% | |
| ! | GTACAAGATACTACGGGTTA+GGG | + | chr3_1:87216651-87216670 | None:intergenic | 40.0% |
| !!! | CAACAACTCGCTTTTAAAGC+CGG | - | chr3_1:87216671-87216690 | Msa0384110:CDS | 40.0% |
| AGCAATAAACCGGGTATAGA+TGG | + | chr3_1:87216702-87216721 | None:intergenic | 40.0% | |
| GTTAGGGCAAGAACATTATC+AGG | + | chr3_1:87216752-87216771 | None:intergenic | 40.0% | |
| CTCAACAGCTTCGTCAAATT+GGG | - | chr3_1:87216774-87216793 | Msa0384110:CDS | 40.0% | |
| TCAACAGCTTCGTCAAATTG+GGG | - | chr3_1:87216775-87216794 | Msa0384110:CDS | 40.0% | |
| !! | TTGGCTAGGAAGTATCAGAA+TGG | - | chr3_1:87216830-87216849 | Msa0384110:CDS | 40.0% |
| !! | TGGCTAGGAAGTATCAGAAT+GGG | - | chr3_1:87216831-87216850 | Msa0384110:CDS | 40.0% |
| !! | TGGTTAATGGGATTGGTTCT+TGG | - | chr3_1:87216915-87216934 | Msa0384110:CDS | 40.0% |
| !! | AATGATCTTGGTGTTCGGAA+AGG | - | chr3_1:87216992-87217011 | Msa0384110:CDS | 40.0% |
| !! | ATGATCTTGGTGTTCGGAAA+GGG | - | chr3_1:87216993-87217012 | Msa0384110:CDS | 40.0% |
| TTGCTTCATGGTATATGTGG+AGG | - | chr3_1:87217101-87217120 | Msa0384110:CDS | 40.0% | |
| TTGCTCAGTTCGGATTCTAC+GGG | + | chr3_1:87216287-87216306 | None:intergenic | 45.0% | |
| GATTGAGATTCGGAGGTTGT+TGG | + | chr3_1:87216386-87216405 | None:intergenic | 45.0% | |
| !! | GGTGGAATTGGTTGGCTTTA+GGG | + | chr3_1:87216414-87216433 | None:intergenic | 45.0% |
| !! | TGGTGGAATTGGTTGGCTTT+AGG | + | chr3_1:87216415-87216434 | None:intergenic | 45.0% |
| CAACGGACGGAACAACAAAA+CGG | - | chr3_1:87216448-87216467 | Msa0384110:CDS | 45.0% | |
| ATTGAGGTTCGTTGTTGTGG+TGG | + | chr3_1:87216479-87216498 | None:intergenic | 45.0% | |
| CGATGAGAGGTGATAAGAGT+GGG | + | chr3_1:87216580-87216599 | None:intergenic | 45.0% | |
| TCGATGAGAGGTGATAAGAG+TGG | + | chr3_1:87216581-87216600 | None:intergenic | 45.0% | |
| !! | GGTTGATGAATGTCGATGAG+AGG | + | chr3_1:87216593-87216612 | None:intergenic | 45.0% |
| GGTACAAGATACTACGGGTT+AGG | + | chr3_1:87216652-87216671 | None:intergenic | 45.0% | |
| !! | CGGCTTTAAAAGCGAGTTGT+TGG | + | chr3_1:87216673-87216692 | None:intergenic | 45.0% |
| ACCCGGTTTATTGCTCTATG+CGG | - | chr3_1:87216707-87216726 | Msa0384110:CDS | 45.0% | |
| ACGAAGCTGTTGAGCAGTTA+GGG | + | chr3_1:87216768-87216787 | None:intergenic | 45.0% | |
| GCTCAACAGCTTCGTCAAAT+TGG | - | chr3_1:87216773-87216792 | Msa0384110:CDS | 45.0% | |
| CTTCGTCAAATTGGGGTTTC+TGG | - | chr3_1:87216782-87216801 | Msa0384110:CDS | 45.0% | |
| !! | TGATCTTGGTGTTCGGAAAG+GGG | - | chr3_1:87216994-87217013 | Msa0384110:CDS | 45.0% |
| ! | GAAGTGGAAGCCTTATCGTT+CGG | - | chr3_1:87217078-87217097 | Msa0384110:CDS | 45.0% |
| CATGAAGCAACCGAACGATA+AGG | + | chr3_1:87217091-87217110 | None:intergenic | 45.0% | |
| CTTATCGTTCGGTTGCTTCA+TGG | - | chr3_1:87217089-87217108 | Msa0384110:CDS | 45.0% | |
| CGGTTGCTTCATGGTATATG+TGG | - | chr3_1:87217098-87217117 | Msa0384110:CDS | 45.0% | |
| !! | TGGAGGTTTGTTGAAGCGAA+GGG | - | chr3_1:87217118-87217137 | Msa0384110:CDS | 45.0% |
| TTGCTCAGTTCGGATTCTAC+GGG | + | chr3_1:87216287-87216306 | None:intergenic | 45.0% | |
| GATTGAGATTCGGAGGTTGT+TGG | + | chr3_1:87216386-87216405 | None:intergenic | 45.0% | |
| !! | GGTGGAATTGGTTGGCTTTA+GGG | + | chr3_1:87216414-87216433 | None:intergenic | 45.0% |
| !! | TGGTGGAATTGGTTGGCTTT+AGG | + | chr3_1:87216415-87216434 | None:intergenic | 45.0% |
| CAACGGACGGAACAACAAAA+CGG | - | chr3_1:87216448-87216467 | Msa0384110:CDS | 45.0% | |
| ATTGAGGTTCGTTGTTGTGG+TGG | + | chr3_1:87216479-87216498 | None:intergenic | 45.0% | |
| CGATGAGAGGTGATAAGAGT+GGG | + | chr3_1:87216580-87216599 | None:intergenic | 45.0% | |
| TCGATGAGAGGTGATAAGAG+TGG | + | chr3_1:87216581-87216600 | None:intergenic | 45.0% | |
| !! | GGTTGATGAATGTCGATGAG+AGG | + | chr3_1:87216593-87216612 | None:intergenic | 45.0% |
| GGTACAAGATACTACGGGTT+AGG | + | chr3_1:87216652-87216671 | None:intergenic | 45.0% | |
| !! | CGGCTTTAAAAGCGAGTTGT+TGG | + | chr3_1:87216673-87216692 | None:intergenic | 45.0% |
| ACCCGGTTTATTGCTCTATG+CGG | - | chr3_1:87216707-87216726 | Msa0384110:CDS | 45.0% | |
| ACGAAGCTGTTGAGCAGTTA+GGG | + | chr3_1:87216768-87216787 | None:intergenic | 45.0% | |
| GCTCAACAGCTTCGTCAAAT+TGG | - | chr3_1:87216773-87216792 | Msa0384110:CDS | 45.0% | |
| CTTCGTCAAATTGGGGTTTC+TGG | - | chr3_1:87216782-87216801 | Msa0384110:CDS | 45.0% | |
| !! | TGATCTTGGTGTTCGGAAAG+GGG | - | chr3_1:87216994-87217013 | Msa0384110:CDS | 45.0% |
| ! | GAAGTGGAAGCCTTATCGTT+CGG | - | chr3_1:87217078-87217097 | Msa0384110:CDS | 45.0% |
| CATGAAGCAACCGAACGATA+AGG | + | chr3_1:87217091-87217110 | None:intergenic | 45.0% | |
| CTTATCGTTCGGTTGCTTCA+TGG | - | chr3_1:87217089-87217108 | Msa0384110:CDS | 45.0% | |
| CGGTTGCTTCATGGTATATG+TGG | - | chr3_1:87217098-87217117 | Msa0384110:CDS | 45.0% | |
| !! | TGGAGGTTTGTTGAAGCGAA+GGG | - | chr3_1:87217118-87217137 | Msa0384110:CDS | 45.0% |
| AACCTCAGCCACAACCACAA+GGG | - | chr3_1:87216201-87216220 | Msa0384110:CDS | 50.0% | |
| GAAGAAACCCCTTGTGGTTG+TGG | + | chr3_1:87216212-87216231 | None:intergenic | 50.0% | |
| TTGTCGGAAGAAACCCCTTG+TGG | + | chr3_1:87216218-87216237 | None:intergenic | 50.0% | |
| TGCTCAGTTCGGATTCTACG+GGG | + | chr3_1:87216286-87216305 | None:intergenic | 50.0% | |
| CCTTTCGGATCTTACGAGGA+CGG | + | chr3_1:87216352-87216371 | None:intergenic | 50.0% | |
| GAGACCTTTCGGATCTTACG+AGG | + | chr3_1:87216356-87216375 | None:intergenic | 50.0% | |
| AGATTCGGAGGTTGTTGGGT+CGG | + | chr3_1:87216381-87216400 | None:intergenic | 50.0% | |
| GGTTTCCGATTGAGATTCGG+AGG | + | chr3_1:87216393-87216412 | None:intergenic | 50.0% | |
| ! | GTTCCGTCCGTTGGATTTTC+CGG | + | chr3_1:87216441-87216460 | None:intergenic | 50.0% |
| !!! | CGTTTTGTTGTTCCGTCCGT+TGG | + | chr3_1:87216450-87216469 | None:intergenic | 50.0% |
| GTGCGAAGGTGAAGTTGAGA+TGG | - | chr3_1:87216529-87216548 | Msa0384110:CDS | 50.0% | |
| AGGTGATAAGAGTGGGTCTG+CGG | + | chr3_1:87216573-87216592 | None:intergenic | 50.0% | |
| TTAGGGCAAGGAATGGAGTC+TGG | + | chr3_1:87216634-87216653 | None:intergenic | 50.0% | |
| !! | AGATACTACGGGTTAGGGCA+AGG | + | chr3_1:87216646-87216665 | None:intergenic | 50.0% |
| ! | CCGGGTATAGATGGAAGTAC+CGG | + | chr3_1:87216693-87216712 | None:intergenic | 50.0% |
| CCGGTACTTCCATCTATACC+CGG | - | chr3_1:87216690-87216709 | Msa0384110:CDS | 50.0% | |
| GCCGCATAGAGCAATAAACC+GGG | + | chr3_1:87216711-87216730 | None:intergenic | 50.0% | |
| CGCCGCATAGAGCAATAAAC+CGG | + | chr3_1:87216712-87216731 | None:intergenic | 50.0% | |
| CGGTTTATTGCTCTATGCGG+CGG | - | chr3_1:87216710-87216729 | Msa0384110:CDS | 50.0% | |
| GACGAAGCTGTTGAGCAGTT+AGG | + | chr3_1:87216769-87216788 | None:intergenic | 50.0% | |
| !! | GTGGAGGTTTGTTGAAGCGA+AGG | - | chr3_1:87217117-87217136 | Msa0384110:CDS | 50.0% |
| AACCTCAGCCACAACCACAA+GGG | - | chr3_1:87216201-87216220 | Msa0384110:CDS | 50.0% | |
| GAAGAAACCCCTTGTGGTTG+TGG | + | chr3_1:87216212-87216231 | None:intergenic | 50.0% | |
| TTGTCGGAAGAAACCCCTTG+TGG | + | chr3_1:87216218-87216237 | None:intergenic | 50.0% | |
| TGCTCAGTTCGGATTCTACG+GGG | + | chr3_1:87216286-87216305 | None:intergenic | 50.0% | |
| CCTTTCGGATCTTACGAGGA+CGG | + | chr3_1:87216352-87216371 | None:intergenic | 50.0% | |
| GAGACCTTTCGGATCTTACG+AGG | + | chr3_1:87216356-87216375 | None:intergenic | 50.0% | |
| AGATTCGGAGGTTGTTGGGT+CGG | + | chr3_1:87216381-87216400 | None:intergenic | 50.0% | |
| GGTTTCCGATTGAGATTCGG+AGG | + | chr3_1:87216393-87216412 | None:intergenic | 50.0% | |
| ! | GTTCCGTCCGTTGGATTTTC+CGG | + | chr3_1:87216441-87216460 | None:intergenic | 50.0% |
| !!! | CGTTTTGTTGTTCCGTCCGT+TGG | + | chr3_1:87216450-87216469 | None:intergenic | 50.0% |
| GTGCGAAGGTGAAGTTGAGA+TGG | - | chr3_1:87216529-87216548 | Msa0384110:CDS | 50.0% | |
| AGGTGATAAGAGTGGGTCTG+CGG | + | chr3_1:87216573-87216592 | None:intergenic | 50.0% | |
| TTAGGGCAAGGAATGGAGTC+TGG | + | chr3_1:87216634-87216653 | None:intergenic | 50.0% | |
| !! | AGATACTACGGGTTAGGGCA+AGG | + | chr3_1:87216646-87216665 | None:intergenic | 50.0% |
| ! | CCGGGTATAGATGGAAGTAC+CGG | + | chr3_1:87216693-87216712 | None:intergenic | 50.0% |
| CCGGTACTTCCATCTATACC+CGG | - | chr3_1:87216690-87216709 | Msa0384110:CDS | 50.0% | |
| GCCGCATAGAGCAATAAACC+GGG | + | chr3_1:87216711-87216730 | None:intergenic | 50.0% | |
| CGCCGCATAGAGCAATAAAC+CGG | + | chr3_1:87216712-87216731 | None:intergenic | 50.0% | |
| CGGTTTATTGCTCTATGCGG+CGG | - | chr3_1:87216710-87216729 | Msa0384110:CDS | 50.0% | |
| GACGAAGCTGTTGAGCAGTT+AGG | + | chr3_1:87216769-87216788 | None:intergenic | 50.0% | |
| !! | GTGGAGGTTTGTTGAAGCGA+AGG | - | chr3_1:87217117-87217136 | Msa0384110:CDS | 50.0% |
| CAACCTCAGCCACAACCACA+AGG | - | chr3_1:87216200-87216219 | Msa0384110:CDS | 55.0% | |
| ACCTCAGCCACAACCACAAG+GGG | - | chr3_1:87216202-87216221 | Msa0384110:CDS | 55.0% | |
| !! | GGTGGCGGAGATTGTGTTGT+CGG | + | chr3_1:87216234-87216253 | None:intergenic | 55.0% |
| AGTTTCGACGGAGTCGACAG+CGG | + | chr3_1:87216258-87216277 | None:intergenic | 55.0% | |
| !!! | ACGGAGGGGCATTTTTGTGG+CGG | + | chr3_1:87216333-87216352 | None:intergenic | 55.0% |
| !!! | AGGACGGAGGGGCATTTTTG+TGG | + | chr3_1:87216336-87216355 | None:intergenic | 55.0% |
| TCGGATCTTACGAGGACGGA+GGG | + | chr3_1:87216348-87216367 | None:intergenic | 55.0% | |
| TTCGGATCTTACGAGGACGG+AGG | + | chr3_1:87216349-87216368 | None:intergenic | 55.0% | |
| CCGTCCTCGTAAGATCCGAA+AGG | - | chr3_1:87216349-87216368 | Msa0384110:CDS | 55.0% | |
| TTGGGTCGGGTGAGACCTTT+CGG | + | chr3_1:87216367-87216386 | None:intergenic | 55.0% | |
| GATTCGGAGGTTGTTGGGTC+GGG | + | chr3_1:87216380-87216399 | None:intergenic | 55.0% | |
| !!! | TTTTCCGGCGGTGGTGGAAT+TGG | + | chr3_1:87216426-87216445 | None:intergenic | 55.0% |
| ACCACCGCCGGAAAATCCAA+CGG | - | chr3_1:87216431-87216450 | Msa0384110:CDS | 55.0% | |
| ! | GCTAGGTCACTTTCGTGCGA+AGG | - | chr3_1:87216515-87216534 | Msa0384110:CDS | 55.0% |
| !! | CTACGGGTTAGGGCAAGGAA+TGG | + | chr3_1:87216641-87216660 | None:intergenic | 55.0% |
| ! | TGATCCATCTGAGATGGCCG+AGG | + | chr3_1:87217049-87217068 | None:intergenic | 55.0% |
| GCAACAGCAGCAGCAGTTGA+AGG | + | chr3_1:87217148-87217167 | None:intergenic | 55.0% | |
| CAACCTCAGCCACAACCACA+AGG | - | chr3_1:87216200-87216219 | Msa0384110:CDS | 55.0% | |
| ACCTCAGCCACAACCACAAG+GGG | - | chr3_1:87216202-87216221 | Msa0384110:CDS | 55.0% | |
| !! | GGTGGCGGAGATTGTGTTGT+CGG | + | chr3_1:87216234-87216253 | None:intergenic | 55.0% |
| AGTTTCGACGGAGTCGACAG+CGG | + | chr3_1:87216258-87216277 | None:intergenic | 55.0% | |
| !!! | ACGGAGGGGCATTTTTGTGG+CGG | + | chr3_1:87216333-87216352 | None:intergenic | 55.0% |
| !!! | AGGACGGAGGGGCATTTTTG+TGG | + | chr3_1:87216336-87216355 | None:intergenic | 55.0% |
| TCGGATCTTACGAGGACGGA+GGG | + | chr3_1:87216348-87216367 | None:intergenic | 55.0% | |
| TTCGGATCTTACGAGGACGG+AGG | + | chr3_1:87216349-87216368 | None:intergenic | 55.0% | |
| CCGTCCTCGTAAGATCCGAA+AGG | - | chr3_1:87216349-87216368 | Msa0384110:CDS | 55.0% | |
| TTGGGTCGGGTGAGACCTTT+CGG | + | chr3_1:87216367-87216386 | None:intergenic | 55.0% | |
| GATTCGGAGGTTGTTGGGTC+GGG | + | chr3_1:87216380-87216399 | None:intergenic | 55.0% | |
| !!! | TTTTCCGGCGGTGGTGGAAT+TGG | + | chr3_1:87216426-87216445 | None:intergenic | 55.0% |
| ACCACCGCCGGAAAATCCAA+CGG | - | chr3_1:87216431-87216450 | Msa0384110:CDS | 55.0% | |
| ! | GCTAGGTCACTTTCGTGCGA+AGG | - | chr3_1:87216515-87216534 | Msa0384110:CDS | 55.0% |
| !! | CTACGGGTTAGGGCAAGGAA+TGG | + | chr3_1:87216641-87216660 | None:intergenic | 55.0% |
| ! | TGATCCATCTGAGATGGCCG+AGG | + | chr3_1:87217049-87217068 | None:intergenic | 55.0% |
| GCAACAGCAGCAGCAGTTGA+AGG | + | chr3_1:87217148-87217167 | None:intergenic | 55.0% | |
| ACCCCTTGTGGTTGTGGCTG+AGG | + | chr3_1:87216206-87216225 | None:intergenic | 60.0% | |
| !! | CATTTTTGTGGCGGGGGCGT+TGG | + | chr3_1:87216324-87216343 | None:intergenic | 60.0% |
| !!! | GAGGGGCATTTTTGTGGCGG+GGG | + | chr3_1:87216330-87216349 | None:intergenic | 60.0% |
| !!! | GGAGGGGCATTTTTGTGGCG+GGG | + | chr3_1:87216331-87216350 | None:intergenic | 60.0% |
| !!! | CGGAGGGGCATTTTTGTGGC+GGG | + | chr3_1:87216332-87216351 | None:intergenic | 60.0% |
| CGGATCTTACGAGGACGGAG+GGG | + | chr3_1:87216347-87216366 | None:intergenic | 60.0% | |
| CCAACCAATTCCACCACCGC+CGG | - | chr3_1:87216419-87216438 | Msa0384110:CDS | 60.0% | |
| ! | GTTGGATTTTCCGGCGGTGG+TGG | + | chr3_1:87216432-87216451 | None:intergenic | 60.0% |
| ! | TCCGTTGGATTTTCCGGCGG+TGG | + | chr3_1:87216435-87216454 | None:intergenic | 60.0% |
| ! | CCGTCCGTTGGATTTTCCGG+CGG | + | chr3_1:87216438-87216457 | None:intergenic | 60.0% |
| CCGCCGGAAAATCCAACGGA+CGG | - | chr3_1:87216435-87216454 | Msa0384110:CDS | 60.0% | |
| AGAGTGGGTCTGCGGTACGA+AGG | + | chr3_1:87216565-87216584 | None:intergenic | 60.0% | |
| CTTGCCTCGGCCATCTCAGA+TGG | - | chr3_1:87217042-87217061 | Msa0384110:CDS | 60.0% | |
| ACTGCTGCTGCTGTTGCCAC+TGG | - | chr3_1:87217151-87217170 | Msa0384110:CDS | 60.0% | |
| GCTGCTGTTGCCACTGGCAA+TGG | - | chr3_1:87217157-87217176 | Msa0384110:CDS | 60.0% | |
| CTGCTGCAAGCCATTGCCAG+TGG | + | chr3_1:87217170-87217189 | None:intergenic | 60.0% | |
| ! | TGGCTTGCAGCAGCATGAGC+TGG | - | chr3_1:87217177-87217196 | Msa0384110:CDS | 60.0% |
| ! | GCTGCTGCTGCTGTTGATGG+TGG | + | chr3_1:87217204-87217223 | None:intergenic | 60.0% |
| GCTGCTGCTGCTGCTGTTGA+TGG | + | chr3_1:87217207-87217226 | None:intergenic | 60.0% | |
| ACCCCTTGTGGTTGTGGCTG+AGG | + | chr3_1:87216206-87216225 | None:intergenic | 60.0% | |
| !! | CATTTTTGTGGCGGGGGCGT+TGG | + | chr3_1:87216324-87216343 | None:intergenic | 60.0% |
| !!! | GAGGGGCATTTTTGTGGCGG+GGG | + | chr3_1:87216330-87216349 | None:intergenic | 60.0% |
| !!! | GGAGGGGCATTTTTGTGGCG+GGG | + | chr3_1:87216331-87216350 | None:intergenic | 60.0% |
| !!! | CGGAGGGGCATTTTTGTGGC+GGG | + | chr3_1:87216332-87216351 | None:intergenic | 60.0% |
| CGGATCTTACGAGGACGGAG+GGG | + | chr3_1:87216347-87216366 | None:intergenic | 60.0% | |
| CCAACCAATTCCACCACCGC+CGG | - | chr3_1:87216419-87216438 | Msa0384110:CDS | 60.0% | |
| ! | GTTGGATTTTCCGGCGGTGG+TGG | + | chr3_1:87216432-87216451 | None:intergenic | 60.0% |
| ! | TCCGTTGGATTTTCCGGCGG+TGG | + | chr3_1:87216435-87216454 | None:intergenic | 60.0% |
| ! | CCGTCCGTTGGATTTTCCGG+CGG | + | chr3_1:87216438-87216457 | None:intergenic | 60.0% |
| CCGCCGGAAAATCCAACGGA+CGG | - | chr3_1:87216435-87216454 | Msa0384110:CDS | 60.0% | |
| AGAGTGGGTCTGCGGTACGA+AGG | + | chr3_1:87216565-87216584 | None:intergenic | 60.0% | |
| CTTGCCTCGGCCATCTCAGA+TGG | - | chr3_1:87217042-87217061 | Msa0384110:CDS | 60.0% | |
| ACTGCTGCTGCTGTTGCCAC+TGG | - | chr3_1:87217151-87217170 | Msa0384110:CDS | 60.0% | |
| GCTGCTGTTGCCACTGGCAA+TGG | - | chr3_1:87217157-87217176 | Msa0384110:CDS | 60.0% | |
| CTGCTGCAAGCCATTGCCAG+TGG | + | chr3_1:87217170-87217189 | None:intergenic | 60.0% | |
| ! | TGGCTTGCAGCAGCATGAGC+TGG | - | chr3_1:87217177-87217196 | Msa0384110:CDS | 60.0% |
| ! | GCTGCTGCTGCTGTTGATGG+TGG | + | chr3_1:87217204-87217223 | None:intergenic | 60.0% |
| GCTGCTGCTGCTGCTGTTGA+TGG | + | chr3_1:87217207-87217226 | None:intergenic | 60.0% | |
| TTCGACGGAGTCGACAGCGG+TGG | + | chr3_1:87216255-87216274 | None:intergenic | 65.0% | |
| !! | CCGGCGGTGGTGGAATTGGT+TGG | + | chr3_1:87216422-87216441 | None:intergenic | 65.0% |
| GCTCTATGCGGCGGTGAAGC+TGG | - | chr3_1:87216719-87216738 | Msa0384110:CDS | 65.0% | |
| TTCGACGGAGTCGACAGCGG+TGG | + | chr3_1:87216255-87216274 | None:intergenic | 65.0% | |
| !! | CCGGCGGTGGTGGAATTGGT+TGG | + | chr3_1:87216422-87216441 | None:intergenic | 65.0% |
| GCTCTATGCGGCGGTGAAGC+TGG | - | chr3_1:87216719-87216738 | Msa0384110:CDS | 65.0% | |
| ! | GGAGTCGACAGCGGTGGTGG+CGG | + | chr3_1:87216249-87216268 | None:intergenic | 70.0% |
| GACGGAGTCGACAGCGGTGG+TGG | + | chr3_1:87216252-87216271 | None:intergenic | 70.0% | |
| ! | GGAGTCGACAGCGGTGGTGG+CGG | + | chr3_1:87216249-87216268 | None:intergenic | 70.0% |
| GACGGAGTCGACAGCGGTGG+TGG | + | chr3_1:87216252-87216271 | None:intergenic | 70.0% | |
| !! | GCGGGGGCGTTGGTGCGTGA+TGG | + | chr3_1:87216314-87216333 | None:intergenic | 75.0% |
| !! | GCGGGGGCGTTGGTGCGTGA+TGG | + | chr3_1:87216314-87216333 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 87216179 | 87217282 | 87216179 | ID=Msa0384110;Name=Msa0384110 |
| chr3_1 | mRNA | 87216179 | 87217282 | 87216179 | ID=Msa0384110-mRNA-1;Parent=Msa0384110;Name=Msa0384110-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|-1|0|1|-1|1|1|0|367 |
| chr3_1 | exon | 87216179 | 87217282 | 87216179 | ID=Msa0384110-mRNA-1:exon:23286;Parent=Msa0384110-mRNA-1 |
| chr3_1 | CDS | 87216179 | 87217282 | 87216179 | ID=Msa0384110-mRNA-1:cds;Parent=Msa0384110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
