AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0392330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0392330 MtrunA17_Chr3g0077511 93.439 503 5 2 1 475 192 694 0.0 959
Msa0392330 MtrunA17_Chr3g0095791 67.928 502 131 3 2 475 192 691 0.0 722
Msa0392330 MtrunA17_Chr2g0298581 67.530 502 133 3 2 475 193 692 0.0 711
Msa0392330 MtrunA17_Chr2g0307191 65.339 502 144 3 2 475 193 692 0.0 690
Msa0392330 MtrunA17_Chr1g0186381 37.205 508 279 8 2 473 208 711 1.40e-116 359
Msa0392330 MtrunA17_Chr4g0046401 37.965 511 273 8 2 473 207 712 2.16e-113 350
Msa0392330 MtrunA17_Chr3g0102531 32.159 454 285 6 39 473 257 706 1.95e-76 253
Msa0392330 MtrunA17_Chr3g0102541 31.291 457 288 6 39 473 258 710 1.10e-74 249
Msa0392330 MtrunA17_Chr3g0102551 29.268 451 295 6 39 471 268 712 1.11e-66 228
Msa0392330 MtrunA17_Chr8g0364641 29.063 523 290 13 25 474 426 940 2.97e-64 224
Msa0392330 MtrunA17_Chr4g0073711 27.239 536 294 14 25 474 472 997 4.43e-61 215
Msa0392330 MtrunA17_Chr4g0025201 28.398 493 295 14 24 467 227 710 6.08e-57 201
Msa0392330 MtrunA17_Chr2g0284211 26.616 526 291 11 35 474 420 936 1.31e-56 202
Msa0392330 MtrunA17_Chr8g0379241 26.628 522 293 11 35 474 435 948 1.90e-55 199
Msa0392330 MtrunA17_Chr1g0183381 27.684 531 292 14 25 474 344 863 1.90e-55 198
Msa0392330 MtrunA17_Chr2g0322361 28.829 444 268 11 25 424 234 673 3.21e-53 191
Msa0392330 MtrunA17_Chr2g0322371 27.743 483 307 12 25 467 227 707 6.34e-52 187
Msa0392330 MtrunA17_Chr2g0322351 27.835 485 299 13 25 467 229 704 3.55e-48 176
Msa0392330 MtrunA17_Chr5g0410641 24.668 527 296 13 39 474 567 1083 1.45e-45 170
Msa0392330 MtrunA17_Chr2g0297351 25.048 523 294 16 38 473 474 985 8.70e-45 168
Msa0392330 MtrunA17_Chr2g0307231 73.196 97 26 0 117 213 1 97 1.92e-44 151
Msa0392330 MtrunA17_Chr4g0039801 25.319 549 295 15 24 474 573 1104 2.01e-43 164
Msa0392330 MtrunA17_Chr7g0267731 37.853 177 91 2 5 162 373 549 3.90e-35 139
Msa0392330 MtrunA17_Chr7g0267731 23.692 325 208 8 181 473 628 944 1.65e-25 110
Msa0392330 MtrunA17_Chr8g0352231 41.026 156 84 1 23 170 490 645 5.27e-35 139
Msa0392330 MtrunA17_Chr8g0352231 24.471 331 210 8 176 474 715 1037 4.94e-29 121
Msa0392330 MtrunA17_Chr1g0201731 47.015 134 70 1 38 170 533 666 8.85e-35 138
Msa0392330 MtrunA17_Chr1g0201731 25.826 333 192 10 175 468 734 1050 1.20e-21 98.6
Msa0392330 MtrunA17_Chr8g0383701 42.675 157 81 2 23 170 508 664 1.69e-34 137
Msa0392330 MtrunA17_Chr8g0383701 26.531 343 209 11 165 473 721 1054 3.35e-27 115
Msa0392330 MtrunA17_Chr3g0088821 46.400 125 67 0 38 162 513 637 4.11e-34 136
Msa0392330 MtrunA17_Chr3g0088821 24.316 329 209 8 178 474 717 1037 1.77e-27 116
Msa0392330 MtrunA17_Chr2g0296991 43.066 137 77 1 35 170 461 597 4.51e-34 136
Msa0392330 MtrunA17_Chr2g0296991 26.220 328 203 11 178 474 684 1003 3.51e-25 109
Msa0392330 MtrunA17_Chr3g0137951 45.985 137 74 0 38 174 523 659 2.24e-32 131
Msa0392330 MtrunA17_Chr3g0137951 27.857 280 174 12 214 474 775 1045 2.95e-24 106
Msa0392330 MtrunA17_Chr3g0078671 41.401 157 83 2 23 170 457 613 2.59e-31 128
Msa0392330 MtrunA17_Chr3g0078671 23.242 327 212 11 181 474 688 1008 4.10e-20 94.0
Msa0392330 MtrunA17_Chr7g0269741 36.932 176 98 4 9 183 587 750 6.28e-28 117
Msa0392330 MtrunA17_Chr7g0269741 23.776 286 177 9 214 473 861 1131 1.08e-15 80.1
Msa0392330 MtrunA17_Chr7g0274751 27.431 288 138 5 24 241 361 647 1.23e-26 114
Msa0392330 MtrunA17_Chr2g0322341 44.545 110 57 1 25 130 234 343 2.98e-26 109
Msa0392330 MtrunA17_Chr1g0165421 38.732 142 86 1 30 171 563 703 3.43e-26 112
Msa0392330 MtrunA17_Chr1g0165421 22.261 283 186 7 214 474 823 1093 1.96e-14 76.3
Msa0392330 MtrunA17_Chr1g0165411 35.227 176 112 2 30 204 549 723 4.25e-26 112
Msa0392330 MtrunA17_Chr1g0165411 24.028 283 181 9 214 474 795 1065 4.74e-15 78.2
Msa0392330 MtrunA17_Chr2g0307221 50.794 63 31 0 257 319 1 63 1.98e-17 77.0
Msa0392330 MtrunA17_Chr2g0322331 24.375 320 204 11 181 467 34 348 3.80e-17 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0392330 AT4G24000.2 33.763 465 277 9 25 468 44 498 2.75e-88 280
Msa0392330 AT4G23990.2 32.780 482 266 9 25 468 44 505 6.14e-88 279
Msa0392330 AT4G24000.1 33.763 465 277 9 25 468 236 690 1.85e-86 280
Msa0392330 AT4G24010.1 33.895 475 276 10 25 471 239 703 2.74e-86 280
Msa0392330 AT4G23990.1 32.780 482 266 9 25 468 258 719 7.57e-86 279
Msa0392330 AT1G55850.1 31.072 457 275 7 39 473 266 704 4.82e-67 228
Msa0392330 AT5G17420.1 27.168 519 289 13 35 474 477 985 5.79e-64 224
Msa0392330 AT4G18780.1 27.221 529 287 11 35 474 423 942 1.26e-57 206
Msa0392330 AT2G32530.1 28.486 502 281 17 2 432 196 690 2.31e-49 180
Msa0392330 AT4G15290.1 28.166 458 267 12 33 437 245 693 6.52e-49 179
Msa0392330 AT4G15320.5 28.322 459 266 12 33 437 245 694 2.06e-47 175
Msa0392330 AT4G15320.3 28.322 459 266 12 33 437 245 694 2.12e-47 175
Msa0392330 AT4G15320.4 28.322 459 266 12 33 437 260 709 2.31e-47 175
Msa0392330 AT2G32540.1 28.446 457 263 13 33 434 245 692 3.78e-46 171
Msa0392330 AT5G16910.1 25.741 540 289 14 30 474 585 1107 4.41e-45 169
Msa0392330 AT2G32620.4 29.412 459 261 16 33 436 149 599 2.34e-44 165
Msa0392330 AT2G32620.1 29.204 452 260 15 33 432 245 688 6.31e-44 165
Msa0392330 AT2G32610.1 27.364 497 280 14 2 426 197 684 9.11e-44 164
Msa0392330 AT3G03050.1 25.184 544 290 14 30 474 582 1107 2.33e-43 164
Msa0392330 AT4G38190.1 25.379 528 292 15 30 474 560 1068 3.70e-43 164
Msa0392330 AT1G32180.1 22.371 523 313 13 39 474 428 944 4.09e-39 151
Msa0392330 AT1G32180.2 22.371 523 313 13 39 474 428 944 4.09e-39 151
Msa0392330 AT2G32620.3 33.228 316 173 11 33 317 245 553 4.34e-39 150
Msa0392330 AT2G32620.2 35.206 267 137 9 33 269 245 505 1.62e-38 147
Msa0392330 AT5G09870.1 45.223 157 77 2 23 170 483 639 1.08e-36 144
Msa0392330 AT5G09870.1 26.506 332 201 11 175 473 706 1027 4.09e-26 112
Msa0392330 AT5G64740.1 44.586 157 78 2 23 170 495 651 2.55e-36 143
Msa0392330 AT5G64740.1 25.610 328 203 10 178 473 724 1042 9.06e-25 108
Msa0392330 AT2G21770.1 47.015 134 70 1 38 170 524 657 8.96e-35 139
Msa0392330 AT2G21770.1 25.602 332 204 11 175 473 724 1045 7.04e-26 112
Msa0392330 AT5G05170.1 46.875 128 68 0 35 162 498 625 1.07e-34 138
Msa0392330 AT5G05170.1 24.302 358 222 10 149 474 684 1024 9.08e-28 117
Msa0392330 AT4G15320.2 25.957 470 256 12 33 423 245 701 3.52e-34 137
Msa0392330 AT4G15320.1 25.934 455 247 11 33 408 288 731 4.42e-34 136
Msa0392330 AT4G39350.1 41.892 148 78 1 23 162 496 643 6.59e-34 136
Msa0392330 AT4G39350.1 24.850 334 204 9 175 473 720 1041 3.58e-24 107
Msa0392330 AT2G25540.1 38.983 177 94 2 6 174 463 633 3.56e-33 134
Msa0392330 AT2G25540.1 23.466 277 190 6 214 474 749 1019 3.38e-23 103
Msa0392330 AT4G32410.1 45.255 137 75 0 38 174 517 653 1.24e-32 132
Msa0392330 AT4G32410.1 25.532 329 205 10 178 474 719 1039 2.45e-26 113
Msa0392330 AT5G44030.3 44.000 125 70 0 38 162 178 302 9.22e-32 129
Msa0392330 AT5G44030.3 24.860 358 227 13 140 474 391 729 5.34e-22 100
Msa0392330 AT5G44030.2 44.000 125 70 0 38 162 486 610 1.57e-31 129
Msa0392330 AT5G44030.2 24.860 358 227 13 140 474 699 1037 6.46e-22 100
Msa0392330 AT5G44030.1 44.000 125 70 0 38 162 457 581 1.78e-31 129
Msa0392330 AT5G44030.1 24.860 358 227 13 140 474 670 1008 5.94e-22 100
Msa0392330 AT1G02730.1 38.000 150 92 1 24 173 604 752 2.03e-27 117
Msa0392330 AT1G02730.1 22.028 286 182 9 214 473 873 1143 3.53e-13 72.8
Msa0392330 AT2G33100.2 37.500 136 84 1 38 173 481 615 8.86e-25 108
Msa0392330 AT2G33100.2 22.545 275 193 7 214 473 730 999 4.01e-15 79.0
Msa0392330 AT2G33100.1 37.500 136 84 1 38 173 481 615 8.86e-25 108
Msa0392330 AT2G33100.1 22.545 275 193 7 214 473 730 999 4.01e-15 79.0

Find 81 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGAGGTCCTGGTCTTTC+TGG 0.063121 3_2:+5380880 Msa0392330:CDS
GCTATTGGATTCATACTTTA+TGG 0.096303 3_2:+5383019 Msa0392330:CDS
TTTGCTTCTTTGGTGGTTTA+TGG 0.144769 3_2:+5384074 Msa0392330:CDS
GCAATATATTTAGAGGTTTC+TGG 0.151089 3_2:-5380635 None:intergenic
AATAGAAGTGCATTATTATT+TGG 0.173018 3_2:+5380919 Msa0392330:CDS
GTGAACACTATTTGCTTCTT+TGG 0.183474 3_2:+5384064 Msa0392330:CDS
TAAACAACACGTGGAATTTC+TGG 0.183636 3_2:-5380337 None:intergenic
CTTGAAAATCCATAAGTAAA+AGG 0.205743 3_2:-5382941 None:intergenic
CATTTGATAGAGGTCATTTC+TGG 0.217342 3_2:+5383803 Msa0392330:CDS
AACAAATGCAATATATTTAG+AGG 0.277003 3_2:-5380642 None:intergenic
TATGAATCCAATAGCATATA+TGG 0.280573 3_2:-5383011 None:intergenic
GGTGGGATGAACAAAGAATT+TGG 0.291492 3_2:+5383846 Msa0392330:CDS
ACAGGTCAAGTACGAGAAAA+TGG 0.301944 3_2:+5379795 None:intergenic
TAGACTCCCCAAAGTAGTTT+TGG 0.305921 3_2:-5382078 None:intergenic
ATTTCATCCATATATGCTAT+TGG 0.307281 3_2:+5383004 Msa0392330:CDS
AAAGAAACACATGGCTTGTT+TGG 0.307493 3_2:-5380606 None:intergenic
TTGATGCCCAAAACTACTTT+GGG 0.310084 3_2:+5382071 Msa0392330:CDS
TTTGGAAGTCCAGTTCAAAA+AGG 0.331537 3_2:+5380937 Msa0392330:CDS
CTTGATGCCCAAAACTACTT+TGG 0.340496 3_2:+5382070 Msa0392330:CDS
CAAAGAAGGCATGCTTCAAT+TGG 0.430014 3_2:+5382871 Msa0392330:CDS
ATAGAGGTCATTTCTGGTGA+TGG 0.431524 3_2:+5383809 Msa0392330:CDS
TGGTTGCAGTTAAGAGTCTC+AGG 0.434750 3_2:+5380515 Msa0392330:intron
TTTCCTGGTTAGCTATGTAA+TGG 0.435646 3_2:+5384141 Msa0392330:CDS
GAGGCAGTTAAGAAATGGTT+AGG 0.443261 3_2:+5383905 Msa0392330:CDS
AACACTATTTGCTTCTTTGG+TGG 0.448242 3_2:+5384067 Msa0392330:CDS
CTAAGATTGTGAAACATTTG+AGG 0.452359 3_2:-5380671 None:intergenic
ATGGATGGTTTGAGAGGTCC+TGG 0.452624 3_2:+5380871 Msa0392330:CDS
TTGAAAATCCATAAGTAAAA+GGG 0.454918 3_2:-5382940 None:intergenic
TAAGATTGTGAAACATTTGA+GGG 0.463319 3_2:-5380670 None:intergenic
TGACAGAGGCAGTTAAGAAA+TGG 0.472408 3_2:+5383900 Msa0392330:CDS
ATGGCTTGTTTGGCTGAAGA+TGG 0.488092 3_2:-5380596 None:intergenic
TTTACGTGTCTCGTGAAAGA+AGG 0.490832 3_2:+5380356 Msa0392330:CDS
TCACAGATAGGATTCTCATA+TGG 0.490844 3_2:+5382737 Msa0392330:intron
CAGTCCACTGCAAGTACATA+AGG 0.491845 3_2:-5380554 None:intergenic
ACATTTATGATAATCAATCT+AGG 0.492978 3_2:+5380702 Msa0392330:CDS
GGTCCTGGTCTTTCTGGCAC+TGG 0.499821 3_2:+5380886 Msa0392330:CDS
ATGCCTTCTTTGATATCAGT+TGG 0.510191 3_2:-5382860 None:intergenic
TGTTACAGGTCACAGACCCT+TGG 0.513094 3_2:+5383738 Msa0392330:intron
GATGGTTTGTTGTCCTCGGA+TGG 0.514250 3_2:-5382125 None:intergenic
ACAAATTCAACATTTGATAG+AGG 0.517780 3_2:+5383793 Msa0392330:CDS
TGGTGACTGATAGACCTTCT+CGG 0.518496 3_2:+5379863 Msa0392330:CDS
TATTTCAGACAATGTGGCAA+GGG 0.537874 3_2:+5380848 Msa0392330:intron
ACTATGAGTAACACAACCAT+TGG 0.541281 3_2:-5384043 None:intergenic
TTGAATTTGTGAGGAAGTGA+TGG 0.541973 3_2:-5380379 None:intergenic
TAACTATGAAAAGTAAGAGT+GGG 0.548538 3_2:+5384194 Msa0392330:CDS
GTCTCAGGTTTAATCAGCAA+TGG 0.549566 3_2:+5380530 Msa0392330:CDS
ACAATGTGGCAAGGGATGGA+TGG 0.559193 3_2:+5380856 Msa0392330:CDS
CTTGAGTGATTCTATGTATG+TGG 0.560568 3_2:-5382101 None:intergenic
ATGGCTCAGTGTCAATGTGG+TGG 0.563672 3_2:+5383828 Msa0392330:CDS
TCAGACAATGTGGCAAGGGA+TGG 0.566411 3_2:+5380852 Msa0392330:intron
TCAAGAAATATGAACAAGGT+AGG 0.568930 3_2:+5383987 Msa0392330:CDS
TGGCTCAGTGTCAATGTGGT+GGG 0.570848 3_2:+5383829 Msa0392330:CDS
ATAACTATGAAAAGTAAGAG+TGG 0.571693 3_2:+5384193 Msa0392330:CDS
TGATGCCCAAAACTACTTTG+GGG 0.574100 3_2:+5382072 Msa0392330:CDS
GAGCCATTACATAGCTAACC+AGG 0.577568 3_2:-5384144 None:intergenic
GCAATTTATTTCAGACAATG+TGG 0.587290 3_2:+5380842 Msa0392330:intron
GGATTTACCTCGATCCGAGA+AGG 0.587807 3_2:-5379877 None:intergenic
AGCTTTGTACATGTCTCCAA+TGG 0.591743 3_2:+5384027 Msa0392330:CDS
GCATGCTTCAATTGGTGAAG+TGG 0.593888 3_2:+5382879 Msa0392330:CDS
TCACTTCCTCACAAATTCAA+AGG 0.597910 3_2:+5380382 Msa0392330:CDS
GCACCTCCTTTGAATTTGTG+AGG 0.599322 3_2:-5380388 None:intergenic
GCACCAACTGATATCAAAGA+AGG 0.601020 3_2:+5382857 Msa0392330:CDS
TTATTTCAGACAATGTGGCA+AGG 0.603544 3_2:+5380847 Msa0392330:intron
TATCAAATGTTGAATTTGTG+TGG 0.607267 3_2:-5383789 None:intergenic
TTACTAGAGAGTACTATCAC+TGG 0.610277 3_2:+5382764 Msa0392330:CDS
CAAGGGATGGATGGTTTGAG+AGG 0.611416 3_2:+5380865 Msa0392330:CDS
CGAGACACGTAAACAACACG+TGG 0.627556 3_2:-5380346 None:intergenic
TTACCAGTGCCAGAAAGACC+AGG 0.629357 3_2:-5380889 None:intergenic
AGGAGGTGCACTCAATACAT+TGG 0.630601 3_2:+5380402 Msa0392330:CDS
AATGCAAACACTGCAAACCA+AGG 0.637039 3_2:-5383755 None:intergenic
CACATACATAGAATCACTCA+AGG 0.639480 3_2:+5382102 Msa0392330:CDS
ATGCAAACACTGCAAACCAA+GGG 0.640787 3_2:-5383754 None:intergenic
TGGACCTTATGTACTTGCAG+TGG 0.647035 3_2:+5380550 Msa0392330:CDS
TGATAGACCTTCTCGGATCG+AGG 0.649181 3_2:+5379870 Msa0392330:CDS
GAATCACTCAAGGCCATCCG+AGG 0.649360 3_2:+5382112 Msa0392330:CDS
TAGTTTGTTTGCAATGACAG+AGG 0.658463 3_2:+5383886 Msa0392330:CDS
CTTCCTCACAAATTCAAAGG+AGG 0.671490 3_2:+5380385 Msa0392330:CDS
TGGATCAAGAAAGAAACACA+TGG 0.680933 3_2:-5380615 None:intergenic
GTGATGGCTCAGTGTCAATG+TGG 0.686344 3_2:+5383825 Msa0392330:CDS
GGTGCACACCCTAAGAAACA+TGG 0.694506 3_2:-5382839 None:intergenic
AAAATCAAGAAATATGAACA+AGG 0.697470 3_2:+5383983 Msa0392330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAACAAAATATTAATTA+AGG + chr3_2:5380740-5380759 Msa0392330:intron 10.0%
!! ATAAGAATAAAAATAAATGA+AGG + chr3_2:5381464-5381483 Msa0392330:intron 10.0%
!! GAAATTTGAAAAATAAAAAT+AGG + chr3_2:5383595-5383614 Msa0392330:intron 10.0%
!! TAAAAAATAGTTAATCACTT+TGG - chr3_2:5380077-5380096 None:intergenic 15.0%
!!! GATTAACTATTTTTTAAATG+TGG + chr3_2:5380081-5380100 Msa0392330:intron 15.0%
!!! TTTTATTGTTTGTTAAAGAT+TGG + chr3_2:5380238-5380257 Msa0392330:intron 15.0%
!! ATGATTGCAAAATAATAATT+AGG - chr3_2:5380972-5380991 None:intergenic 15.0%
!!! ATTTTACAAGTTTATTTTGT+AGG + chr3_2:5381380-5381399 Msa0392330:intron 15.0%
!!! TGTGTAAACTTTTAAAATTT+TGG - chr3_2:5382398-5382417 None:intergenic 15.0%
!! TGAAAAAATATCAATCAATT+CGG - chr3_2:5382475-5382494 None:intergenic 15.0%
!! GAGAAAAATATTGAGAAATT+CGG + chr3_2:5379817-5379836 Msa0392330:CDS 20.0%
!!! ATTATTCAATGTAATTTGTG+AGG - chr3_2:5379944-5379963 None:intergenic 20.0%
!! TAAGTAAATTGTAAACTAAG+TGG + chr3_2:5380106-5380125 Msa0392330:intron 20.0%
!! TACAATTTACAATTTGCATT+CGG - chr3_2:5380159-5380178 None:intergenic 20.0%
!! ATTGGAAAAAAAAAAAGAGA+AGG + chr3_2:5380256-5380275 Msa0392330:intron 20.0%
!!! ATTTCACACATTTTTTATTG+TGG + chr3_2:5380495-5380514 Msa0392330:intron 20.0%
!! AACAAATGCAATATATTTAG+AGG - chr3_2:5380645-5380664 None:intergenic 20.0%
!! ACATTTATGATAATCAATCT+AGG + chr3_2:5380702-5380721 Msa0392330:CDS 20.0%
!!! TTTGATGATCATATAAATGA+TGG + chr3_2:5380813-5380832 Msa0392330:intron 20.0%
!!! AATAGAAGTGCATTATTATT+TGG + chr3_2:5380919-5380938 Msa0392330:CDS 20.0%
!!! ACAACTAAAAACCTAATTTT+AGG - chr3_2:5381566-5381585 None:intergenic 20.0%
!! AAATTGTCTTCACTTATAAA+CGG + chr3_2:5381887-5381906 Msa0392330:intron 20.0%
!! AAATCAACCACATAAAAATT+TGG + chr3_2:5381943-5381962 Msa0392330:intron 20.0%
!!! AAATAGTCCAAATTTTTATG+TGG - chr3_2:5381953-5381972 None:intergenic 20.0%
!!! AAAGAAAAGTACTCTTATAT+TGG - chr3_2:5382027-5382046 None:intergenic 20.0%
!!! TTTTGAAAGATTCTTTTTGA+TGG - chr3_2:5382146-5382165 None:intergenic 20.0%
!! TGATACATTTATCAAAATCT+AGG + chr3_2:5382248-5382267 Msa0392330:intron 20.0%
!! GATACATTTATCAAAATCTA+GGG + chr3_2:5382249-5382268 Msa0392330:intron 20.0%
!! GACTAAAATATCTATTTACT+TGG - chr3_2:5382280-5382299 None:intergenic 20.0%
!!! ATTTTGTACAACAATTTTAG+AGG - chr3_2:5382440-5382459 None:intergenic 20.0%
!! TATTACTATTTCGTAAATTG+AGG + chr3_2:5382508-5382527 Msa0392330:intron 20.0%
!!! CATGTTTTATAGATAGTAAT+AGG - chr3_2:5382575-5382594 None:intergenic 20.0%
!!! ACTATATGTGGTATATTTTT+GGG - chr3_2:5382636-5382655 None:intergenic 20.0%
!!! TACTATATGTGGTATATTTT+TGG - chr3_2:5382637-5382656 None:intergenic 20.0%
!!! TTGAATTTTTATTCACAGAT+AGG + chr3_2:5382725-5382744 Msa0392330:intron 20.0%
!! TTGAAAATCCATAAGTAAAA+GGG - chr3_2:5382943-5382962 None:intergenic 20.0%
!!! TTGAATATATGTTTTACCTT+TGG - chr3_2:5383088-5383107 None:intergenic 20.0%
!!! TATATTTAAAATTGCGATTG+TGG + chr3_2:5383119-5383138 Msa0392330:intron 20.0%
!!! AAATTCATGGTTTTAAATTG+CGG - chr3_2:5383268-5383287 None:intergenic 20.0%
!!! ACCATGAATTTTATTATGAT+TGG + chr3_2:5383277-5383296 Msa0392330:intron 20.0%
!! TCCAATCATAATAAAATTCA+TGG - chr3_2:5383281-5383300 None:intergenic 20.0%
!! ACATGTTAAATTATAAAACC+AGG - chr3_2:5383705-5383724 None:intergenic 20.0%
!!! TTTTAATTTACTGTTGTTAC+AGG + chr3_2:5383724-5383743 Msa0392330:intron 20.0%
!! AAAATCAAGAAATATGAACA+AGG + chr3_2:5383983-5384002 Msa0392330:CDS 20.0%
! AGTGGTTAACTATTTGTAAT+AGG + chr3_2:5380024-5380043 Msa0392330:intron 25.0%
! GTTAACTATTTGTAATAGGT+TGG + chr3_2:5380028-5380047 Msa0392330:intron 25.0%
! TAAATTGTAAACTAAGTGGT+TGG + chr3_2:5380110-5380129 Msa0392330:intron 25.0%
! TGCAAATTGTAAATTGTATG+TGG + chr3_2:5380161-5380180 Msa0392330:intron 25.0%
! GTTTATTCGTTAATTAGTTG+AGG - chr3_2:5380218-5380237 None:intergenic 25.0%
! TAAGATTGTGAAACATTTGA+GGG - chr3_2:5380673-5380692 None:intergenic 25.0%
!! AAATATGTACCTTTTTGAAC+TGG - chr3_2:5380949-5380968 None:intergenic 25.0%
! TTACATGACAAGTAATAATG+TGG - chr3_2:5381060-5381079 None:intergenic 25.0%
!!! CAAGTTTATTTTGTAGGTTT+TGG + chr3_2:5381386-5381405 Msa0392330:intron 25.0%
! GTACTATTCCTCTTAAAATT+TGG - chr3_2:5381418-5381437 None:intergenic 25.0%
!! CTTAATCACAAATTCTAAGA+TGG - chr3_2:5381831-5381850 None:intergenic 25.0%
!! GATCATATTTTGTCTAATGT+AGG + chr3_2:5381909-5381928 Msa0392330:intron 25.0%
! CAAAAAGAATCTTTCAAAAG+AGG + chr3_2:5382147-5382166 Msa0392330:CDS 25.0%
!! TGTCGATCTTTACAATTTTA+AGG - chr3_2:5382302-5382321 None:intergenic 25.0%
!!! AATTTTGGTGCAAAAATTTG+AGG - chr3_2:5382383-5382402 None:intergenic 25.0%
! AGTTTACACATAACATAACA+AGG + chr3_2:5382408-5382427 Msa0392330:intron 25.0%
! GTTTACACATAACATAACAA+GGG + chr3_2:5382409-5382428 Msa0392330:intron 25.0%
! CTTGAAAATCCATAAGTAAA+AGG - chr3_2:5382944-5382963 None:intergenic 25.0%
! ATTTCATCCATATATGCTAT+TGG + chr3_2:5383004-5383023 Msa0392330:CDS 25.0%
! TATGAATCCAATAGCATATA+TGG - chr3_2:5383014-5383033 None:intergenic 25.0%
! CTTTACATTGTGATAAAATG+CGG + chr3_2:5383155-5383174 Msa0392330:intron 25.0%
!! TAGTAAGTAAATTTTTGTCC+TGG + chr3_2:5383684-5383703 Msa0392330:intron 25.0%
! TATCAAATGTTGAATTTGTG+TGG - chr3_2:5383792-5383811 None:intergenic 25.0%
! ACAAATTCAACATTTGATAG+AGG + chr3_2:5383793-5383812 Msa0392330:CDS 25.0%
! ATAACTATGAAAAGTAAGAG+TGG + chr3_2:5384193-5384212 Msa0392330:CDS 25.0%
! TAACTATGAAAAGTAAGAGT+GGG + chr3_2:5384194-5384213 Msa0392330:CDS 25.0%
AATCCAATAAAGGATCACAA+TGG + chr3_2:5379895-5379914 Msa0392330:intron 30.0%
AATCCATTGTGATCCTTTAT+TGG - chr3_2:5379901-5379920 None:intergenic 30.0%
TGTGTTAATATTCACACTAG+TGG + chr3_2:5380006-5380025 Msa0392330:intron 30.0%
GCAATATATTTAGAGGTTTC+TGG - chr3_2:5380638-5380657 None:intergenic 30.0%
CTAAGATTGTGAAACATTTG+AGG - chr3_2:5380674-5380693 None:intergenic 30.0%
GCAATTTATTTCAGACAATG+TGG + chr3_2:5380842-5380861 Msa0392330:intron 30.0%
GATTGCAAAAAATGAATGTG+TGG - chr3_2:5381018-5381037 None:intergenic 30.0%
TACAAAAAGTTTAGACGTGT+TGG - chr3_2:5381279-5381298 None:intergenic 30.0%
AAGAGGAATAGTACATAACT+AGG + chr3_2:5381424-5381443 Msa0392330:intron 30.0%
ATTATCTACTAGCAGCTTAA+AGG - chr3_2:5381529-5381548 None:intergenic 30.0%
! GCTAGTAGATAATTTTTGCT+AGG + chr3_2:5381536-5381555 Msa0392330:intron 30.0%
GTAAAATCTCTTAGAACTTG+TGG + chr3_2:5381607-5381626 Msa0392330:intron 30.0%
!! CAGTTTTGTGTAGTTATGTT+AGG - chr3_2:5381854-5381873 None:intergenic 30.0%
AAATGCTAACTTCAATGTTG+TGG - chr3_2:5381996-5382015 None:intergenic 30.0%
TACTATTTCGTAAATTGAGG+AGG + chr3_2:5382511-5382530 Msa0392330:intron 30.0%
!! GGCATTTTAGTCATTGAATT+TGG - chr3_2:5382554-5382573 None:intergenic 30.0%
GATCAACTGAATACTATATG+TGG - chr3_2:5382648-5382667 None:intergenic 30.0%
! CTAAGAAACATGGTGTTTTT+GGG - chr3_2:5382832-5382851 None:intergenic 30.0%
CAAAAACACCATGTTTCTTA+GGG + chr3_2:5382831-5382850 Msa0392330:CDS 30.0%
! AAATACAGCCCTTTTACTTA+TGG + chr3_2:5382932-5382951 Msa0392330:CDS 30.0%
GCTATTGGATTCATACTTTA+TGG + chr3_2:5383019-5383038 Msa0392330:CDS 30.0%
! CGCATTTTATCACAATGTAA+AGG - chr3_2:5383157-5383176 None:intergenic 30.0%
!!! CATATTTTTTCAAACCAAGC+AGG - chr3_2:5383304-5383323 None:intergenic 30.0%
! GCTTGGTTTGAAAAAATATG+TGG + chr3_2:5383304-5383323 Msa0392330:intron 30.0%
CAAAATTGTCTATGCTACAA+TGG + chr3_2:5383356-5383375 Msa0392330:intron 30.0%
AATTGAAATTCGAATTCTCC+TGG + chr3_2:5383443-5383462 Msa0392330:intron 30.0%
ATGTAAAAACCAAGTGATTG+AGG - chr3_2:5383506-5383525 None:intergenic 30.0%
!! CACTTGGTTTTTACATGAAA+CGG + chr3_2:5383510-5383529 Msa0392330:intron 30.0%
TCAAGAAATATGAACAAGGT+AGG + chr3_2:5383987-5384006 Msa0392330:CDS 30.0%
!! AGAGATTTTGAAGACATGTT+TGG + chr3_2:5384112-5384131 Msa0392330:CDS 30.0%
! TCTTAGCTATCCAATTTTTG+AGG + chr3_2:5384165-5384184 Msa0392330:CDS 30.0%
! CTTAGCTATCCAATTTTTGA+GGG + chr3_2:5384166-5384185 Msa0392330:CDS 30.0%
!! TTAGCTATCCAATTTTTGAG+GGG + chr3_2:5384167-5384186 Msa0392330:CDS 30.0%
GTTATAATCCCCTCAAAAAT+TGG - chr3_2:5384178-5384197 None:intergenic 30.0%
! TCACCATACGAAGATTTTTG+GGG - chr3_2:5379849-5379868 None:intergenic 35.0%
! GTCACCATACGAAGATTTTT+GGG - chr3_2:5379850-5379869 None:intergenic 35.0%
! AGTCACCATACGAAGATTTT+TGG - chr3_2:5379851-5379870 None:intergenic 35.0%
GATCGAGGTAAATCCAATAA+AGG + chr3_2:5379885-5379904 Msa0392330:intron 35.0%
TAAACAACACGTGGAATTTC+TGG - chr3_2:5380340-5380359 None:intergenic 35.0%
TTGAATTTGTGAGGAAGTGA+TGG - chr3_2:5380382-5380401 None:intergenic 35.0%
TCACTTCCTCACAAATTCAA+AGG + chr3_2:5380382-5380401 Msa0392330:CDS 35.0%
!! AAAGAAACACATGGCTTGTT+TGG - chr3_2:5380609-5380628 None:intergenic 35.0%
TGGATCAAGAAAGAAACACA+TGG - chr3_2:5380618-5380637 None:intergenic 35.0%
!! TCAATCTAGGACTGCTTTTA+AGG + chr3_2:5380715-5380734 Msa0392330:CDS 35.0%
TTATTTCAGACAATGTGGCA+AGG + chr3_2:5380847-5380866 Msa0392330:intron 35.0%
TATTTCAGACAATGTGGCAA+GGG + chr3_2:5380848-5380867 Msa0392330:intron 35.0%
TTTGGAAGTCCAGTTCAAAA+AGG + chr3_2:5380937-5380956 Msa0392330:CDS 35.0%
!! CATGTTTCAAAGAGTATCGA+CGG - chr3_2:5381223-5381242 None:intergenic 35.0%
! CTTAATCTTGATGACCCATT+AGG + chr3_2:5381251-5381270 Msa0392330:intron 35.0%
TAAGAGTCGTTGAATGATGT+AGG + chr3_2:5381322-5381341 Msa0392330:intron 35.0%
! GGTCACAACCAAATTTTAAG+AGG + chr3_2:5381407-5381426 Msa0392330:intron 35.0%
TGCTAGGTGTACCTAAAATT+AGG + chr3_2:5381552-5381571 Msa0392330:intron 35.0%
AATCTCTTAGAACTTGTGGT+TGG + chr3_2:5381611-5381630 Msa0392330:intron 35.0%
TCAATAGTTCTTGTCATGAG+GGG - chr3_2:5381735-5381754 None:intergenic 35.0%
CTCAATAGTTCTTGTCATGA+GGG - chr3_2:5381736-5381755 None:intergenic 35.0%
ATGACAAGAACTATTGAGCT+TGG + chr3_2:5381738-5381757 Msa0392330:intron 35.0%
AGCTTCTGTTAAGATCTGTT+GGG - chr3_2:5381802-5381821 None:intergenic 35.0%
TTGATGCCCAAAACTACTTT+GGG + chr3_2:5382071-5382090 Msa0392330:CDS 35.0%
CTTGAGTGATTCTATGTATG+TGG - chr3_2:5382104-5382123 None:intergenic 35.0%
CACATACATAGAATCACTCA+AGG + chr3_2:5382102-5382121 Msa0392330:CDS 35.0%
!!! TTTTGATGGTTTGTTGTCCT+CGG - chr3_2:5382132-5382151 None:intergenic 35.0%
CTACGAATCAAACACACAAT+GGG + chr3_2:5382207-5382226 Msa0392330:intron 35.0%
TACGAATCAAACACACAATG+GGG + chr3_2:5382208-5382227 Msa0392330:intron 35.0%
TCACAGATAGGATTCTCATA+TGG + chr3_2:5382737-5382756 Msa0392330:intron 35.0%
!! TTACTAGAGAGTACTATCAC+TGG + chr3_2:5382764-5382783 Msa0392330:CDS 35.0%
!!! AACATGGTGTTTTTGGGTAA+AGG - chr3_2:5382826-5382845 None:intergenic 35.0%
! CCTAAGAAACATGGTGTTTT+TGG - chr3_2:5382833-5382852 None:intergenic 35.0%
CCAAAAACACCATGTTTCTT+AGG + chr3_2:5382830-5382849 Msa0392330:CDS 35.0%
ATGCCTTCTTTGATATCAGT+TGG - chr3_2:5382863-5382882 None:intergenic 35.0%
AGGAATATCTGTGTTTCCAA+AGG + chr3_2:5383069-5383088 Msa0392330:intron 35.0%
CAATTGCAGCTACAATATTG+CGG - chr3_2:5383229-5383248 None:intergenic 35.0%
TTATTATGATTGGACCTGCT+TGG + chr3_2:5383287-5383306 Msa0392330:intron 35.0%
ACAATGGACCATTGGTAAAT+TGG + chr3_2:5383372-5383391 Msa0392330:intron 35.0%
TAGTTAAAGACAAATCGTCC+AGG - chr3_2:5383464-5383483 None:intergenic 35.0%
CATTTGATAGAGGTCATTTC+TGG + chr3_2:5383803-5383822 Msa0392330:CDS 35.0%
!! TAGTTTGTTTGCAATGACAG+AGG + chr3_2:5383886-5383905 Msa0392330:CDS 35.0%
!! CAAGGTAGGTTTGATTTTCA+AGG + chr3_2:5384001-5384020 Msa0392330:CDS 35.0%
ACTATGAGTAACACAACCAT+TGG - chr3_2:5384046-5384065 None:intergenic 35.0%
GTGAACACTATTTGCTTCTT+TGG + chr3_2:5384064-5384083 Msa0392330:CDS 35.0%
AACACTATTTGCTTCTTTGG+TGG + chr3_2:5384067-5384086 Msa0392330:CDS 35.0%
! TTTGCTTCTTTGGTGGTTTA+TGG + chr3_2:5384074-5384093 Msa0392330:CDS 35.0%
! TTTCCTGGTTAGCTATGTAA+TGG + chr3_2:5384141-5384160 Msa0392330:CDS 35.0%
!!! CATACGAAGATTTTTGGGGT+CGG - chr3_2:5379845-5379864 None:intergenic 40.0%
TTTACGTGTCTCGTGAAAGA+AGG + chr3_2:5380356-5380375 Msa0392330:CDS 40.0%
CTTCCTCACAAATTCAAAGG+AGG + chr3_2:5380385-5380404 Msa0392330:CDS 40.0%
GTCTCAGGTTTAATCAGCAA+TGG + chr3_2:5380530-5380549 Msa0392330:CDS 40.0%
TAGACGTGTTGGATCCTAAT+GGG - chr3_2:5381268-5381287 None:intergenic 40.0%
TTAGACGTGTTGGATCCTAA+TGG - chr3_2:5381269-5381288 None:intergenic 40.0%
CAACGACTCTTAATAGCTTC+AGG - chr3_2:5381314-5381333 None:intergenic 40.0%
!! TGACAGAGACTTGCTGATTA+AGG + chr3_2:5381499-5381518 Msa0392330:intron 40.0%
!! TAAAACTGACTTGTGAGGAG+AGG + chr3_2:5381656-5381675 Msa0392330:intron 40.0%
GCTCAATAGTTCTTGTCATG+AGG - chr3_2:5381737-5381756 None:intergenic 40.0%
GAGCTTCTGTTAAGATCTGT+TGG - chr3_2:5381803-5381822 None:intergenic 40.0%
CTTGATGCCCAAAACTACTT+TGG + chr3_2:5382070-5382089 Msa0392330:CDS 40.0%
TGATGCCCAAAACTACTTTG+GGG + chr3_2:5382072-5382091 Msa0392330:CDS 40.0%
! AGACTCCCCAAAGTAGTTTT+GGG - chr3_2:5382080-5382099 None:intergenic 40.0%
! TAGACTCCCCAAAGTAGTTT+TGG - chr3_2:5382081-5382100 None:intergenic 40.0%
! CCATTGTGTGTTTGATTCGT+AGG - chr3_2:5382209-5382228 None:intergenic 40.0%
CCTACGAATCAAACACACAA+TGG + chr3_2:5382206-5382225 Msa0392330:intron 40.0%
GACTTCCATGTTGTCAAATG+TGG + chr3_2:5382594-5382613 Msa0392330:intron 40.0%
GCACCAACTGATATCAAAGA+AGG + chr3_2:5382857-5382876 Msa0392330:CDS 40.0%
! CAAAGAAGGCATGCTTCAAT+TGG + chr3_2:5382871-5382890 Msa0392330:CDS 40.0%
ACATTGTGATAAAATGCGGC+TGG + chr3_2:5383159-5383178 Msa0392330:intron 40.0%
TTGCGGTTGTGATACCATTA+CGG + chr3_2:5383193-5383212 Msa0392330:intron 40.0%
TCTATGCTACAATGGACCAT+TGG + chr3_2:5383364-5383383 Msa0392330:intron 40.0%
ATGGACCATTGGTAAATTGG+AGG + chr3_2:5383375-5383394 Msa0392330:intron 40.0%
ACCATTGGTAAATTGGAGGT+CGG + chr3_2:5383379-5383398 Msa0392330:intron 40.0%
ATGCAAACACTGCAAACCAA+GGG - chr3_2:5383757-5383776 None:intergenic 40.0%
AATGCAAACACTGCAAACCA+AGG - chr3_2:5383758-5383777 None:intergenic 40.0%
!! ATAGAGGTCATTTCTGGTGA+TGG + chr3_2:5383809-5383828 Msa0392330:CDS 40.0%
GGTGGGATGAACAAAGAATT+TGG + chr3_2:5383846-5383865 Msa0392330:CDS 40.0%
TGACAGAGGCAGTTAAGAAA+TGG + chr3_2:5383900-5383919 Msa0392330:CDS 40.0%
GAGGCAGTTAAGAAATGGTT+AGG + chr3_2:5383905-5383924 Msa0392330:CDS 40.0%
! AGCTTTGTACATGTCTCCAA+TGG + chr3_2:5384027-5384046 Msa0392330:CDS 40.0%
! CATGTTTGGTCAACTTTTCC+TGG + chr3_2:5384126-5384145 Msa0392330:CDS 40.0%
CGACCCCAAAAATCTTCGTA+TGG + chr3_2:5379843-5379862 Msa0392330:CDS 45.0%
TGGTGACTGATAGACCTTCT+CGG + chr3_2:5379863-5379882 Msa0392330:CDS 45.0%
GCACCTCCTTTGAATTTGTG+AGG - chr3_2:5380391-5380410 None:intergenic 45.0%
! AGGAGGTGCACTCAATACAT+TGG + chr3_2:5380402-5380421 Msa0392330:CDS 45.0%
TGGTTGCAGTTAAGAGTCTC+AGG + chr3_2:5380515-5380534 Msa0392330:intron 45.0%
TGGACCTTATGTACTTGCAG+TGG + chr3_2:5380550-5380569 Msa0392330:CDS 45.0%
CAGTCCACTGCAAGTACATA+AGG - chr3_2:5380557-5380576 None:intergenic 45.0%
!! ATGGCTTGTTTGGCTGAAGA+TGG - chr3_2:5380599-5380618 None:intergenic 45.0%
TATCGACGGATGAACACTTG+AGG - chr3_2:5381209-5381228 None:intergenic 45.0%
TCTCACTCTTGAGCTGATCT+AGG + chr3_2:5381585-5381604 Msa0392330:intron 45.0%
! CCTCACAAGTCAGTTTTACG+AGG - chr3_2:5381654-5381673 None:intergenic 45.0%
!! CCTCGTAAAACTGACTTGTG+AGG + chr3_2:5381651-5381670 Msa0392330:intron 45.0%
! GAACTATTGAGCTTGGTTCG+TGG + chr3_2:5381745-5381764 Msa0392330:intron 45.0%
! GCTTGGTTCGTGGACATAAA+TGG + chr3_2:5381755-5381774 Msa0392330:intron 45.0%
TGGTTCGTGGACATAAATGG+TGG + chr3_2:5381758-5381777 Msa0392330:intron 45.0%
! TCGTGGACATAAATGGTGGA+TGG + chr3_2:5381762-5381781 Msa0392330:intron 45.0%
CCACTCCACATTTGACAACA+TGG - chr3_2:5382602-5382621 None:intergenic 45.0%
CCATGTTGTCAAATGTGGAG+TGG + chr3_2:5382599-5382618 Msa0392330:intron 45.0%
! ATCTTTTGCACTGCAGAGGA+TGG + chr3_2:5382789-5382808 Msa0392330:CDS 45.0%
GCATGCTTCAATTGGTGAAG+TGG + chr3_2:5382879-5382898 Msa0392330:CDS 45.0%
CCTTTCAAGAAGCAGACTTG+AGG - chr3_2:5383052-5383071 None:intergenic 45.0%
CCTCAAGTCTGCTTCTTGAA+AGG + chr3_2:5383049-5383068 Msa0392330:intron 45.0%
!!! GCGGATTTTGAAGTCCGTAA+TGG - chr3_2:5383210-5383229 None:intergenic 45.0%
CCATTGGTAAATTGGAGGTC+GGG + chr3_2:5383380-5383399 Msa0392330:intron 45.0%
ACCACTTGACCTCAATCACT+TGG + chr3_2:5383494-5383513 Msa0392330:intron 45.0%
ACCAAGTGATTGAGGTCAAG+TGG - chr3_2:5383498-5383517 None:intergenic 45.0%
GAGCCATTACATAGCTAACC+AGG - chr3_2:5384147-5384166 None:intergenic 45.0%
!! AAATTTGAAAAATAAAAATA+GGG + chr3_2:5383596-5383615 Msa0392330:intron 5.0%
TGATAGACCTTCTCGGATCG+AGG + chr3_2:5379870-5379889 Msa0392330:CDS 50.0%
GGATTTACCTCGATCCGAGA+AGG - chr3_2:5379880-5379899 None:intergenic 50.0%
CGAGACACGTAAACAACACG+TGG - chr3_2:5380349-5380368 None:intergenic 50.0%
TCAGACAATGTGGCAAGGGA+TGG + chr3_2:5380852-5380871 Msa0392330:intron 50.0%
ACAATGTGGCAAGGGATGGA+TGG + chr3_2:5380856-5380875 Msa0392330:CDS 50.0%
CAAGGGATGGATGGTTTGAG+AGG + chr3_2:5380865-5380884 Msa0392330:CDS 50.0%
ATGGATGGTTTGAGAGGTCC+TGG + chr3_2:5380871-5380890 Msa0392330:CDS 50.0%
! TTGAGAGGTCCTGGTCTTTC+TGG + chr3_2:5380880-5380899 Msa0392330:CDS 50.0%
TTACCAGTGCCAGAAAGACC+AGG - chr3_2:5380892-5380911 None:intergenic 50.0%
! GAACTTGTGGTTGGTGTGCT+TGG + chr3_2:5381620-5381639 Msa0392330:intron 50.0%
!! GATGGTTTGTTGTCCTCGGA+TGG - chr3_2:5382128-5382147 None:intergenic 50.0%
! GGCTATCTTTTGCACTGCAG+AGG + chr3_2:5382785-5382804 Msa0392330:CDS 50.0%
GGTGCACACCCTAAGAAACA+TGG - chr3_2:5382842-5382861 None:intergenic 50.0%
GGCTGGTGCAGTTGAAATTG+CGG + chr3_2:5383176-5383195 Msa0392330:intron 50.0%
CCCGACCTCCAATTTACCAA+TGG - chr3_2:5383383-5383402 None:intergenic 50.0%
TTGGTAAATTGGAGGTCGGG+TGG + chr3_2:5383383-5383402 Msa0392330:intron 50.0%
TGTTACAGGTCACAGACCCT+TGG + chr3_2:5383738-5383757 Msa0392330:intron 50.0%
GTGATGGCTCAGTGTCAATG+TGG + chr3_2:5383825-5383844 Msa0392330:CDS 50.0%
ATGGCTCAGTGTCAATGTGG+TGG + chr3_2:5383828-5383847 Msa0392330:CDS 50.0%
TGGCTCAGTGTCAATGTGGT+GGG + chr3_2:5383829-5383848 Msa0392330:CDS 50.0%
GAATCACTCAAGGCCATCCG+AGG + chr3_2:5382112-5382131 Msa0392330:CDS 55.0%
! GGTCCTGGTCTTTCTGGCAC+TGG + chr3_2:5380886-5380905 Msa0392330:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 5379799 5384219 5379799 ID=Msa0392330;Name=Msa0392330
chr3_2 mRNA 5379799 5384219 5379799 ID=Msa0392330-mRNA-1;Parent=Msa0392330;Name=Msa0392330-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|7|0|475
chr3_2 exon 5379799 5379891 5379799 ID=Msa0392330-mRNA-1:exon:1346;Parent=Msa0392330-mRNA-1
chr3_2 exon 5380322 5380423 5380322 ID=Msa0392330-mRNA-1:exon:1347;Parent=Msa0392330-mRNA-1
chr3_2 exon 5380524 5380736 5380524 ID=Msa0392330-mRNA-1:exon:1348;Parent=Msa0392330-mRNA-1
chr3_2 exon 5380856 5380958 5380856 ID=Msa0392330-mRNA-1:exon:1349;Parent=Msa0392330-mRNA-1
chr3_2 exon 5382059 5382189 5382059 ID=Msa0392330-mRNA-1:exon:1350;Parent=Msa0392330-mRNA-1
chr3_2 exon 5382743 5383054 5382743 ID=Msa0392330-mRNA-1:exon:1351;Parent=Msa0392330-mRNA-1
chr3_2 exon 5383746 5384219 5383746 ID=Msa0392330-mRNA-1:exon:1352;Parent=Msa0392330-mRNA-1
chr3_2 CDS 5379799 5379891 5379799 ID=Msa0392330-mRNA-1:cds;Parent=Msa0392330-mRNA-1
chr3_2 CDS 5380322 5380423 5380322 ID=Msa0392330-mRNA-1:cds;Parent=Msa0392330-mRNA-1
chr3_2 CDS 5380524 5380736 5380524 ID=Msa0392330-mRNA-1:cds;Parent=Msa0392330-mRNA-1
chr3_2 CDS 5380856 5380958 5380856 ID=Msa0392330-mRNA-1:cds;Parent=Msa0392330-mRNA-1
chr3_2 CDS 5382059 5382189 5382059 ID=Msa0392330-mRNA-1:cds;Parent=Msa0392330-mRNA-1
chr3_2 CDS 5382743 5383054 5382743 ID=Msa0392330-mRNA-1:cds;Parent=Msa0392330-mRNA-1
chr3_2 CDS 5383746 5384219 5383746 ID=Msa0392330-mRNA-1:cds;Parent=Msa0392330-mRNA-1
Gene Sequence

>Msa0392330

GTCAAGTACGAGAAAATGGAGAAAAATATTGAGAAATTCGGTTCCGACCCCAAAAATCTTCGTATGGTGACTGATAGACCTTCTCGGATCGAGATTATAAATGAAGAACCAGAAATTCCACGTGTTGTTTACGTGTCTCGTGAAAGAAGGCCATCACTTCCTCACAAATTCAAAGGAGGTGCACTCAATACATTGTTAAGAGTCTCAGGTTTAATCAGCAATGGACCTTATGTACTTGCAGTGGACTGTGATATGTATTGCAATGATCCATCTTCAGCCAAACAAGCCATGTGTTTCTTTCTTGATCCAGAAACCTCTAAATATATTGCATTTGTTCAATTCCCTCAAATGTTTCACAATCTTAGCAAAAAAGACATTTATGATAATCAATCTAGGACTGCTTTTAAGACAATGTGGCAAGGGATGGATGGTTTGAGAGGTCCTGGTCTTTCTGGCACTGGTAATTACTTGAATAGAAGTGCATTATTATTTGGAAGTCCAGTTCAAAAAGATGACTATCTTCTTGATGCCCAAAACTACTTTGGGGAGTCTACCACATACATAGAATCACTCAAGGCCATCCGAGGACAACAAACCATCAAAAAGAATCTTTCAAAAGAGGAAATTTTGCGAGAAGCTCAAATAGGATTCTCATATGGCATCTTACTAGAGAGTACTATCACTGGCTATCTTTTGCACTGCAGAGGATGGAAATCAGCTTACCTTTACCCAAAAACACCATGTTTCTTAGGGTGTGCACCAACTGATATCAAAGAAGGCATGCTTCAATTGGTGAAGTGGTTGTCTGAACTTTGCTTGTTTGCTGTCTCTAAATACAGCCCTTTTACTTATGGATTTTCAAGAATGTCTGCTATTCACAACTTCACTTATTGCTTCATGTCTATTTCATCCATATATGCTATTGGATTCATACTTTATGGCATTGTACCTCAAGTCACAGACCCTTGGTTTGCAGTGTTTGCATTCTTATATGTTGCCACACAAATTCAACATTTGATAGAGGTCATTTCTGGTGATGGCTCAGTGTCAATGTGGTGGGATGAACAAAGAATTTGGATTCTGAAATCAGTTACTAGTTTGTTTGCAATGACAGAGGCAGTTAAGAAATGGTTAGGATTGAACAAGAAGAAATTCAACTTGTCAAACAAAGCACTTGACACAGATAAAGAGAAAATCAAGAAATATGAACAAGGTAGGTTTGATTTTCAAGGTGCAGCTTTGTACATGTCTCCAATGGTTGTGTTACTCATAGTGAACACTATTTGCTTCTTTGGTGGTTTATGGAGACTATTCAATACAAGAGATTTTGAAGACATGTTTGGTCAACTTTTCCTGGTTAGCTATGTAATGGCTCTTAGCTATCCAATTTTTGAGGGGATTATAACTATGAAAAGTAAGAGTGGGTAA
Protein sequence

>Msa0392330

VKYEKMEKNIEKFGSDPKNLRMVTDRPSRIEIINEEPEIPRVVYVSRERRPSLPHKFKGGALNTLLRVSGLISNGPYVLAVDCDMYCNDPSSAKQAMCFFLDPETSKYIAFVQFPQMFHNLSKKDIYDNQSRTAFKTMWQGMDGLRGPGLSGTGNYLNRSALLFGSPVQKDDYLLDAQNYFGESTTYIESLKAIRGQQTIKKNLSKEEILREAQIGFSYGILLESTITGYLLHCRGWKSAYLYPKTPCFLGCAPTDIKEGMLQLVKWLSELCLFAVSKYSPFTYGFSRMSAIHNFTYCFMSISSIYAIGFILYGIVPQVTDPWFAVFAFLYVATQIQHLIEVISGDGSVSMWWDEQRIWILKSVTSLFAMTEAVKKWLGLNKKKFNLSNKALDTDKEKIKKYEQGRFDFQGAALYMSPMVVLLIVNTICFFGGLWRLFNTRDFEDMFGQLFLVSYVMALSYPIFEGIITMKSKSG*