Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393550 | XP_003598166.2 | 93.474 | 475 | 19 | 2 | 1 | 465 | 1 | 473 | 0.0 | 870 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393550 | sp|Q8GW43|BIOF_ARATH | 68.251 | 463 | 123 | 3 | 12 | 454 | 6 | 464 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393550 | G7IVJ8 | 93.474 | 475 | 19 | 2 | 1 | 465 | 1 | 473 | 0.0 | 870 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221030 | Msa0393550 | 0.802400 | 5.711664e-49 | -8.615850e-47 |
| Msa0393550 | Msa0462110 | 0.834332 | 3.186384e-56 | -8.615850e-47 |
| Msa0393550 | Msa0488820 | 0.863302 | 2.742243e-64 | -8.615850e-47 |
| Msa0393550 | Msa1426370 | 0.819069 | 1.409438e-52 | -8.615850e-47 |
| Msa0393550 | Msa1426490 | 0.819091 | 1.393255e-52 | -8.615850e-47 |
| Msa0348990 | Msa0393550 | 0.844811 | 6.000641e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393550 | MtrunA17_Chr3g0078851 | 93.474 | 475 | 19 | 2 | 1 | 465 | 1 | 473 | 0.0 | 870 |
| Msa0393550 | MtrunA17_Chr6g0461991 | 26.176 | 340 | 205 | 6 | 134 | 447 | 143 | 462 | 1.01e-25 | 109 |
| Msa0393550 | MtrunA17_Chr3g0099931 | 23.117 | 385 | 243 | 13 | 92 | 445 | 110 | 472 | 1.09e-18 | 88.6 |
| Msa0393550 | MtrunA17_Chr5g0430851 | 22.857 | 385 | 244 | 13 | 92 | 445 | 110 | 472 | 4.51e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393550 | AT5G04620.2 | 68.251 | 463 | 123 | 3 | 12 | 454 | 6 | 464 | 0.0 | 635 |
| Msa0393550 | AT5G04620.3 | 68.293 | 410 | 106 | 3 | 12 | 401 | 6 | 411 | 0.0 | 555 |
| Msa0393550 | AT5G04620.1 | 76.133 | 331 | 79 | 0 | 124 | 454 | 1 | 331 | 0.0 | 527 |
| Msa0393550 | AT5G23670.1 | 25.982 | 331 | 199 | 7 | 134 | 438 | 143 | 453 | 6.57e-26 | 110 |
| Msa0393550 | AT5G23670.2 | 25.982 | 331 | 199 | 7 | 134 | 438 | 143 | 453 | 6.57e-26 | 110 |
| Msa0393550 | AT3G48780.2 | 25.982 | 331 | 199 | 7 | 134 | 438 | 143 | 453 | 3.28e-25 | 108 |
| Msa0393550 | AT3G48780.1 | 25.982 | 331 | 199 | 7 | 134 | 438 | 143 | 453 | 3.28e-25 | 108 |
| Msa0393550 | AT3G48790.1 | 25.994 | 327 | 203 | 9 | 131 | 438 | 4 | 310 | 1.06e-22 | 99.4 |
| Msa0393550 | AT3G48790.2 | 27.170 | 265 | 168 | 8 | 193 | 438 | 20 | 278 | 1.61e-19 | 89.7 |
| Msa0393550 | AT4G36480.2 | 22.628 | 274 | 182 | 7 | 92 | 355 | 109 | 362 | 5.95e-16 | 80.5 |
| Msa0393550 | AT4G36480.1 | 22.628 | 274 | 182 | 7 | 92 | 355 | 109 | 362 | 5.95e-16 | 80.5 |
| Msa0393550 | AT4G36480.3 | 20.940 | 234 | 159 | 4 | 92 | 317 | 109 | 324 | 4.05e-13 | 70.9 |
Find 127 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTATTGAGTCTAATTTA+AGG | 0.180311 | 3_2:-7645766 | Msa0393550:three_prime_UTR |
| TTAGGTGAAGAGATTGTTTA+TGG | 0.198161 | 3_2:-7650716 | Msa0393550:CDS |
| AAAGACTTTCATTTGCTTAC+AGG | 0.206039 | 3_2:-7647022 | Msa0393550:CDS |
| ATTGTTTATGGTGCAGTTTC+TGG | 0.219909 | 3_2:-7650704 | Msa0393550:CDS |
| CTCTAGCTGCCTATGATAAT+TGG | 0.252472 | 3_2:+7650394 | None:intergenic |
| CGTCTTGCTGAGCGGCAAAA+AGG | 0.257869 | 3_2:-7649320 | Msa0393550:CDS |
| CTGGCAATGGGGTACTGTTC+CGG | 0.280631 | 3_2:+7645788 | None:intergenic |
| TTCCAAGATACACGAATTTA+CGG | 0.288778 | 3_2:-7645881 | Msa0393550:CDS |
| TTTCCAAATCTTCCCTTGTA+TGG | 0.320552 | 3_2:+7645936 | None:intergenic |
| TGTCACTATGGAATAAAATA+AGG | 0.335552 | 3_2:+7645717 | None:intergenic |
| TACAGGATTTGCTGCCAATA+TGG | 0.344081 | 3_2:-7649465 | Msa0393550:CDS |
| GATATGATGGGACTTGTAAC+AGG | 0.356056 | 3_2:+7646995 | None:intergenic |
| TGGCAATGGGGTACTGTTCC+GGG | 0.357704 | 3_2:+7645789 | None:intergenic |
| ATGGAGGATTTATAGCTTGC+AGG | 0.364817 | 3_2:-7647864 | Msa0393550:intron |
| GACAAAATAGCTTGTCACTA+TGG | 0.365353 | 3_2:+7645705 | None:intergenic |
| TGCCACCATGCACTTGGTAT+TGG | 0.380187 | 3_2:+7651925 | None:intergenic |
| GACTCAATAATGCTGGCAAT+GGG | 0.383523 | 3_2:+7645776 | None:intergenic |
| GCAGCAGCAGCAACTGGAAC+CGG | 0.383798 | 3_2:+7647629 | None:intergenic |
| CCAGTTGCTGCTGCTGCTCA+TGG | 0.386729 | 3_2:-7647623 | Msa0393550:intron |
| AGGGGTTCTGCTCTTATTTG+TGG | 0.388904 | 3_2:-7650422 | Msa0393550:CDS |
| GTCTTCAGTGCCAACGATAA+GGG | 0.391432 | 3_2:+7646973 | None:intergenic |
| TTATAGCTCTCCATTCTATC+AGG | 0.394212 | 3_2:-7645839 | Msa0393550:exon |
| CTGAGTTCCCATCCGACTAT+TGG | 0.396677 | 3_2:-7650608 | Msa0393550:CDS |
| AGTATTGGTTCTCTCTTAGC+TGG | 0.404148 | 3_2:-7649422 | Msa0393550:CDS |
| TGCTGTCATCAAGGCCATAT+TGG | 0.404382 | 3_2:+7649451 | None:intergenic |
| ATGACAGCAATTGGAAGTAT+TGG | 0.404847 | 3_2:-7649437 | Msa0393550:CDS |
| GTGGATATACCAATTATCAT+AGG | 0.411155 | 3_2:-7650403 | Msa0393550:CDS |
| GATTGCCTTCTTTGTCCTAC+AGG | 0.411725 | 3_2:-7649482 | Msa0393550:CDS |
| AGTCCATACAAGGGAAGATT+TGG | 0.414221 | 3_2:-7645939 | Msa0393550:CDS |
| GCTACTAACCTGCAGGAGTT+AGG | 0.415259 | 3_2:+7646738 | None:intergenic |
| TACCCCACGTTGGAGACAAA+TGG | 0.417704 | 3_2:+7651840 | None:intergenic |
| TGCAGCTTGTTTAGCATGGA+TGG | 0.419362 | 3_2:-7648391 | Msa0393550:intron |
| AGCCGTAAATTCGTGTATCT+TGG | 0.428138 | 3_2:+7645879 | None:intergenic |
| TGTCTTCAGTGCCAACGATA+AGG | 0.430524 | 3_2:+7646972 | None:intergenic |
| CATGGCGTAGAAAGGCCATT+TGG | 0.432019 | 3_2:-7647054 | Msa0393550:CDS |
| TAGGCAGCTAGAGTCGAGTT+TGG | 0.436591 | 3_2:-7650384 | Msa0393550:CDS |
| ATGGCCTTGATGACAGCAAT+TGG | 0.443915 | 3_2:-7649446 | Msa0393550:CDS |
| GTAGAAAGGCCATTTGGAAC+CGG | 0.446898 | 3_2:-7647048 | Msa0393550:CDS |
| CCATGAGCAGCAGCAGCAAC+TGG | 0.447831 | 3_2:+7647623 | None:intergenic |
| CATGCACTTGGTATTGGTAT+TGG | 0.448515 | 3_2:+7651931 | None:intergenic |
| CCCTCAGTGCAGTCCATACA+AGG | 0.466293 | 3_2:-7645949 | Msa0393550:CDS |
| GCCAACGATAAGGGATATGA+TGG | 0.470013 | 3_2:+7646982 | None:intergenic |
| TGCAATTCATCCTGATAGAA+TGG | 0.471003 | 3_2:+7645829 | None:intergenic |
| AACAGGCATTTATTACAAGC+TGG | 0.479117 | 3_2:-7646798 | Msa0393550:intron |
| GTCTTTCACCCGGTTCCAAA+TGG | 0.482290 | 3_2:+7647039 | None:intergenic |
| ACCCCACGTTGGAGACAAAT+GGG | 0.494900 | 3_2:+7651841 | None:intergenic |
| GGATGGGGACTTTGCACCAA+TGG | 0.499074 | 3_2:-7648374 | Msa0393550:CDS |
| ATGGGATCGTTCTTCTGTTG+AGG | 0.500572 | 3_2:-7651779 | Msa0393550:CDS |
| GCTCATGGGACATTTGTTTG+TGG | 0.500720 | 3_2:-7647976 | Msa0393550:CDS |
| CTGTGCCTCCTAACTCCTGC+AGG | 0.500969 | 3_2:-7646746 | Msa0393550:intron |
| TAAATTAGACTCAATAATGC+TGG | 0.509439 | 3_2:+7645769 | None:intergenic |
| AGTAAAGCTGCCGGCTGCCA+TGG | 0.511804 | 3_2:-7647883 | Msa0393550:CDS |
| GCAGCTTGTTTAGCATGGAT+GGG | 0.512276 | 3_2:-7648390 | Msa0393550:intron |
| AATCACGCGTCAATAATTGA+TGG | 0.513514 | 3_2:-7649347 | Msa0393550:CDS |
| ACATGAGACATGGCGTAGAA+AGG | 0.514262 | 3_2:-7647062 | Msa0393550:CDS |
| GGTAAATGATGATGCGTTTG+AGG | 0.514623 | 3_2:-7651821 | Msa0393550:CDS |
| CCTTGTATGGACTGCACTGA+GGG | 0.516556 | 3_2:+7645949 | None:intergenic |
| AATGTGCGTTTCCAGGCTCA+TGG | 0.523142 | 3_2:-7647991 | Msa0393550:intron |
| CAGCTTGTTTAGCATGGATG+GGG | 0.523345 | 3_2:-7648389 | Msa0393550:CDS |
| AGACTCAATAATGCTGGCAA+TGG | 0.524404 | 3_2:+7645775 | None:intergenic |
| GCAGCAGCCTTTCCAATAGT+CGG | 0.526222 | 3_2:+7650596 | None:intergenic |
| CAATAGTCGGATGGGAACTC+AGG | 0.528500 | 3_2:+7650609 | None:intergenic |
| GACCCATTTGTCTCCAACGT+GGG | 0.531504 | 3_2:-7651843 | Msa0393550:CDS |
| TATTAGGCAGCTCAAGAACA+TGG | 0.535300 | 3_2:-7650455 | Msa0393550:intron |
| ACTTCCAATTGCTGTCATCA+AGG | 0.535625 | 3_2:+7649442 | None:intergenic |
| AAGAACATGGGATGGGACCA+AGG | 0.538361 | 3_2:-7650442 | Msa0393550:CDS |
| TATTGGAAAGGCTGCTGCAA+AGG | 0.541245 | 3_2:-7650591 | Msa0393550:intron |
| GAAGTACTCTGAGAGAATCA+AGG | 0.543629 | 3_2:+7651875 | None:intergenic |
| TATAAATCCTCCATGGCAGC+CGG | 0.545155 | 3_2:+7647873 | None:intergenic |
| GTTTCTGGTGATGATGAAGC+AGG | 0.549109 | 3_2:-7650689 | Msa0393550:CDS |
| GCAGAACTCCGCAAGAAGCA+TGG | 0.550468 | 3_2:-7648343 | Msa0393550:CDS |
| TTATTGCAGCTTGTTTAGCA+TGG | 0.551970 | 3_2:-7648395 | Msa0393550:intron |
| GAGTTAGGAGGCACAGTTGG+TGG | 0.555017 | 3_2:+7646753 | None:intergenic |
| AGAACATGGGATGGGACCAA+GGG | 0.555717 | 3_2:-7650441 | Msa0393550:CDS |
| GTTCAATTGTGAGAAGGATG+TGG | 0.559563 | 3_2:-7647926 | Msa0393550:CDS |
| GTATTGGTTCTCTCTTAGCT+GGG | 0.560380 | 3_2:-7649421 | Msa0393550:CDS |
| ACACGAATTTACGGCTGCAA+TGG | 0.562509 | 3_2:-7645872 | Msa0393550:CDS |
| CAAATCCTGTAGGACAAAGA+AGG | 0.562711 | 3_2:+7649477 | None:intergenic |
| GGCAGCTCAAGAACATGGGA+TGG | 0.564408 | 3_2:-7650450 | Msa0393550:CDS |
| ATCAATGTGATTAACTATCC+CGG | 0.564848 | 3_2:-7645807 | Msa0393550:three_prime_UTR |
| TAGAAAGGCCATTTGGAACC+GGG | 0.565145 | 3_2:-7647047 | Msa0393550:CDS |
| TAAGGACATTGCATTTGTAG+TGG | 0.566631 | 3_2:-7645748 | Msa0393550:three_prime_UTR |
| CAGCCTTTCCAATAGTCGGA+TGG | 0.571423 | 3_2:+7650600 | None:intergenic |
| TCACAATGTCTATATATGTA+CGG | 0.573210 | 3_2:+7649290 | None:intergenic |
| GTTTGATGAAATGCAGCAAT+GGG | 0.577345 | 3_2:-7651797 | Msa0393550:CDS |
| CAAATAAGAGCAGAACCCCT+TGG | 0.578144 | 3_2:+7650425 | None:intergenic |
| ATGTGCGTTTCCAGGCTCAT+GGG | 0.580951 | 3_2:-7647990 | Msa0393550:intron |
| AGCCTTTCCAATAGTCGGAT+GGG | 0.582726 | 3_2:+7650601 | None:intergenic |
| ACAAAGCACTGCAAGCAAGC+CGG | 0.591467 | 3_2:-7646952 | Msa0393550:intron |
| AGTTCTGCAAGCTCAACCAT+TGG | 0.591758 | 3_2:+7648358 | None:intergenic |
| CCCATCATATCCCTTATCGT+TGG | 0.593478 | 3_2:-7646983 | Msa0393550:CDS |
| AAGTACTCTGAGAGAATCAA+GGG | 0.600416 | 3_2:+7651876 | None:intergenic |
| CTCACAAGAGTGTATTGAGG+TGG | 0.601182 | 3_2:+7649261 | None:intergenic |
| CGACCCATTTGTCTCCAACG+TGG | 0.602726 | 3_2:-7651844 | Msa0393550:CDS |
| CAGGAGTTAGGAGGCACAGT+TGG | 0.603297 | 3_2:+7646750 | None:intergenic |
| AAGGATGTGGATATTTGCAT+TGG | 0.603517 | 3_2:-7647913 | Msa0393550:CDS |
| TTCCCATCCGACTATTGGAA+AGG | 0.612334 | 3_2:-7650603 | Msa0393550:CDS |
| GTGGTCTGATTGCAGTCACA+TGG | 0.612568 | 3_2:+7646772 | None:intergenic |
| CCCTTGTATGGACTGCACTG+AGG | 0.613045 | 3_2:+7645948 | None:intergenic |
| TGTTTGATGAAATGCAGCAA+TGG | 0.613912 | 3_2:-7651798 | Msa0393550:CDS |
| TGCAAGCTATAAATCCTCCA+TGG | 0.620898 | 3_2:+7647866 | None:intergenic |
| AAAGCTGCCGGCTGCCATGG+AGG | 0.624806 | 3_2:-7647880 | Msa0393550:CDS |
| GCAGCTCAAGAACATGGGAT+GGG | 0.629189 | 3_2:-7650449 | Msa0393550:CDS |
| CAATACCAATACCAAGTGCA+TGG | 0.635504 | 3_2:-7651930 | Msa0393550:CDS |
| ATTAGGCAGCTCAAGAACAT+GGG | 0.637158 | 3_2:-7650454 | Msa0393550:intron |
| CATCATCATTTACCCCACGT+TGG | 0.640499 | 3_2:+7651830 | None:intergenic |
| ACTAACCTGCAGGAGTTAGG+AGG | 0.641127 | 3_2:+7646741 | None:intergenic |
| TCACAAGAGTGTATTGAGGT+GGG | 0.645382 | 3_2:+7649262 | None:intergenic |
| GCAAATGAAAGTCTTTCACC+CGG | 0.646068 | 3_2:+7647029 | None:intergenic |
| ATTGATGCAATTCGAGAGTG+CGG | 0.646071 | 3_2:+7645904 | None:intergenic |
| AAATGGTGGTGGTGTTGCTG+AGG | 0.647397 | 3_2:-7647950 | Msa0393550:CDS |
| GGTACACTAAGTAAAGCTGC+CGG | 0.648395 | 3_2:-7647892 | Msa0393550:CDS |
| GAACATGGGATGGGACCAAG+GGG | 0.650419 | 3_2:-7650440 | Msa0393550:CDS |
| GAGTGGCAAAACATGAGACA+TGG | 0.650779 | 3_2:-7647072 | Msa0393550:CDS |
| TTTCTGGTGATGATGAAGCA+GGG | 0.655163 | 3_2:-7650688 | Msa0393550:CDS |
| TGAGGAGTTCAATTGTGAGA+AGG | 0.658460 | 3_2:-7647932 | Msa0393550:CDS |
| ATATTGGCAGCAAATCCTGT+AGG | 0.658659 | 3_2:+7649467 | None:intergenic |
| ATATGATGGGACTTGTAACA+GGG | 0.666917 | 3_2:+7646996 | None:intergenic |
| ACCCATTTGTCTCCAACGTG+GGG | 0.667676 | 3_2:-7651842 | Msa0393550:CDS |
| ATGGTATTCGTCTTGCTGAG+CGG | 0.672498 | 3_2:-7649328 | Msa0393550:CDS |
| CCAACGATAAGGGATATGAT+GGG | 0.676737 | 3_2:+7646983 | None:intergenic |
| AAACTCACAAGAGTGTATTG+AGG | 0.681743 | 3_2:+7649258 | None:intergenic |
| AAGTTATTAATACAGTCAAG+AGG | 0.690909 | 3_2:-7647680 | Msa0393550:CDS |
| ACTCAATAATGCTGGCAATG+GGG | 0.701737 | 3_2:+7645777 | None:intergenic |
| CCTCAGTGCAGTCCATACAA+GGG | 0.703411 | 3_2:-7645948 | Msa0393550:CDS |
| TGAATTCTTATAGCACATCG+TGG | 0.706133 | 3_2:-7647703 | Msa0393550:intron |
| TACCAATACCAAGTGCATGG+TGG | 0.719863 | 3_2:-7651927 | Msa0393550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTGAAAATTGAAAA+TGG | + | chr3_2:7647870-7647889 | None:intergenic | 10.0% |
| !!! | TTTTCAATTATTTATATTTC+TGG | - | chr3_2:7647877-7647896 | Msa0393550:CDS | 10.0% |
| !! | TTTCAATTATTTATATTTCT+GGG | - | chr3_2:7647878-7647897 | Msa0393550:CDS | 10.0% |
| !! | ACTATTAAGATTAATAAAAT+AGG | + | chr3_2:7648755-7648774 | None:intergenic | 10.0% |
| !!! | ACTAATTCTTTTTTTTTTTT+AGG | + | chr3_2:7650336-7650355 | None:intergenic | 10.0% |
| !!! | TTATTTTCTCAATCTATTAT+AGG | + | chr3_2:7645995-7646014 | None:intergenic | 15.0% |
| !! | ACGAAATTCAAAATAATTAT+AGG | + | chr3_2:7646235-7646254 | None:intergenic | 15.0% |
| !!! | TTCAACCATATTTTTATAAT+AGG | + | chr3_2:7646436-7646455 | None:intergenic | 15.0% |
| !!! | AGAAAATTAATTTTGTTTTC+TGG | - | chr3_2:7646945-7646964 | Msa0393550:intron | 15.0% |
| !! | AGATTAATAATACATTACTT+AGG | + | chr3_2:7647318-7647337 | None:intergenic | 15.0% |
| !! | AAAGTATAAAATAATCCTAA+TGG | - | chr3_2:7647938-7647957 | Msa0393550:CDS | 15.0% |
| !! | ATGAATAATATGCAAATTTA+AGG | + | chr3_2:7648367-7648386 | None:intergenic | 15.0% |
| !!! | AAAAGTATGTAAAAAATTAG+TGG | - | chr3_2:7648634-7648653 | Msa0393550:intron | 15.0% |
| !!! | TTACTTTCTAGAAATATAAA+TGG | + | chr3_2:7649444-7649463 | None:intergenic | 15.0% |
| !! | CATAGAATAGAAAAATTTAT+TGG | + | chr3_2:7649871-7649890 | None:intergenic | 15.0% |
| !! | TTGATATATCTTAAATATTG+AGG | - | chr3_2:7650015-7650034 | Msa0393550:intron | 15.0% |
| !! | AAGAAAAAATATTGAGAAAT+AGG | + | chr3_2:7650073-7650092 | None:intergenic | 15.0% |
| !! | ATGGAAAAATATATAATCAA+AGG | + | chr3_2:7651573-7651592 | None:intergenic | 15.0% |
| !! | GCATACCTATTATAAAAATA+TGG | - | chr3_2:7646428-7646447 | Msa0393550:intron | 20.0% |
| !!! | AATCTAAACTTTGGTAATTT+GGG | - | chr3_2:7646454-7646473 | Msa0393550:intron | 20.0% |
| !! | TGTAATTAAGATAGATTTAG+AGG | - | chr3_2:7646570-7646589 | Msa0393550:intron | 20.0% |
| !! | ATCGTTAAATAAAGAAGATT+TGG | - | chr3_2:7646706-7646725 | Msa0393550:intron | 20.0% |
| !!! | TATTCTTGTTATTTGCATAA+AGG | - | chr3_2:7646750-7646769 | Msa0393550:CDS | 20.0% |
| !!! | ATTCTTGTTATTTGCATAAA+GGG | - | chr3_2:7646751-7646770 | Msa0393550:CDS | 20.0% |
| !!! | TTTTCTGGAAATGATTATTT+AGG | - | chr3_2:7646960-7646979 | Msa0393550:CDS | 20.0% |
| !!! | TTCTTCTGAATTTTATTCTA+CGG | - | chr3_2:7647056-7647075 | Msa0393550:CDS | 20.0% |
| !!! | TATTTTCATTGTTCCATATT+AGG | - | chr3_2:7647121-7647140 | Msa0393550:intron | 20.0% |
| !! | ATTATTTGTGCAGTATATAT+GGG | - | chr3_2:7647465-7647484 | Msa0393550:intron | 20.0% |
| !!! | AATTGACTTCATTTTATCTT+TGG | + | chr3_2:7647636-7647655 | None:intergenic | 20.0% |
| !!! | GTTGTTTTCATAAGTTATAA+TGG | - | chr3_2:7647669-7647688 | Msa0393550:CDS | 20.0% |
| !! | ATTGAATTTACATATATCAG+TGG | - | chr3_2:7647914-7647933 | Msa0393550:CDS | 20.0% |
| !!! | TTTTGAATTTAAAGAACTTG+CGG | - | chr3_2:7647972-7647991 | Msa0393550:CDS | 20.0% |
| !! | AACAAATATAGGAGATATTT+AGG | + | chr3_2:7648583-7648602 | None:intergenic | 20.0% |
| !! | GATTATCTAAGAACAAATAT+AGG | + | chr3_2:7648594-7648613 | None:intergenic | 20.0% |
| !! | GTATATAAAAAGCTTTCAAA+CGG | - | chr3_2:7648950-7648969 | Msa0393550:intron | 20.0% |
| !!! | TTCTAGAAATATAAATGGTA+CGG | + | chr3_2:7649439-7649458 | None:intergenic | 20.0% |
| !! | TAATATAAGGATATAACGAT+CGG | + | chr3_2:7650112-7650131 | None:intergenic | 20.0% |
| !!! | TATCTTTTAGAATGAAATTC+AGG | + | chr3_2:7650889-7650908 | None:intergenic | 20.0% |
| !! | GGATTCAAGTAATAAAATAT+TGG | + | chr3_2:7651078-7651097 | None:intergenic | 20.0% |
| !! | TCAAGTTCAACTTAAAATTA+TGG | + | chr3_2:7651099-7651118 | None:intergenic | 20.0% |
| !!! | ATGTTGTTAGTGATTTTTTT+TGG | - | chr3_2:7651207-7651226 | Msa0393550:intron | 20.0% |
| !!! | GTTTTCTCTAATTTTGTAAA+CGG | - | chr3_2:7651243-7651262 | Msa0393550:intron | 20.0% |
| ! | GTAATTATAAGCTATAAGAC+AGG | - | chr3_2:7646258-7646277 | Msa0393550:intron | 25.0% |
| ! | ATATGGTTGAATCTAAACTT+TGG | - | chr3_2:7646445-7646464 | Msa0393550:intron | 25.0% |
| !! | GAATCTAAACTTTGGTAATT+TGG | - | chr3_2:7646453-7646472 | Msa0393550:intron | 25.0% |
| ! | TTTGTGTTCTGTTATGATTT+CGG | - | chr3_2:7646809-7646828 | Msa0393550:intron | 25.0% |
| ! | ACAAGAAAAAGAGGAAAAAA+AGG | + | chr3_2:7646849-7646868 | None:intergenic | 25.0% |
| !!! | TTTTTTTCCTCTTTTTCTTG+TGG | - | chr3_2:7646848-7646867 | Msa0393550:intron | 25.0% |
| !! | TCTTCTGAATTTTATTCTAC+GGG | - | chr3_2:7647057-7647076 | Msa0393550:CDS | 25.0% |
| ! | ATTTGAAAAAGAAAGAGGTA+AGG | - | chr3_2:7647234-7647253 | Msa0393550:intron | 25.0% |
| !! | AAGAATCACTATACAGTTTT+TGG | - | chr3_2:7647346-7647365 | Msa0393550:intron | 25.0% |
| !! | AGAATCACTATACAGTTTTT+GGG | - | chr3_2:7647347-7647366 | Msa0393550:intron | 25.0% |
| ! | GATTATTTGTGCAGTATATA+TGG | - | chr3_2:7647464-7647483 | Msa0393550:intron | 25.0% |
| ! | TTATTTGTGCAGTATATATG+GGG | - | chr3_2:7647466-7647485 | Msa0393550:intron | 25.0% |
| !!! | TCAAGGTGATATATGTTTTT+TGG | - | chr3_2:7647500-7647519 | Msa0393550:intron | 25.0% |
| !!! | ATATATGTTTTTTGGTTACC+TGG | - | chr3_2:7647508-7647527 | Msa0393550:intron | 25.0% |
| !!! | TATATGTTTTTTGGTTACCT+GGG | - | chr3_2:7647509-7647528 | Msa0393550:intron | 25.0% |
| !! | AAGTTATAATGGAGAGTTTA+TGG | - | chr3_2:7647680-7647699 | Msa0393550:CDS | 25.0% |
| ! | TCACACATATCAAGTATTAA+GGG | + | chr3_2:7647821-7647840 | None:intergenic | 25.0% |
| ! | TTCACACATATCAAGTATTA+AGG | + | chr3_2:7647822-7647841 | None:intergenic | 25.0% |
| ! | GCAAGTTCTTTAAATTCAAA+AGG | + | chr3_2:7647973-7647992 | None:intergenic | 25.0% |
| ! | TTTGAATTTAAAGAACTTGC+GGG | - | chr3_2:7647973-7647992 | Msa0393550:CDS | 25.0% |
| ! | TAATTCACTATTCATTAGGT+GGG | + | chr3_2:7648015-7648034 | None:intergenic | 25.0% |
| ! | TTAATTCACTATTCATTAGG+TGG | + | chr3_2:7648016-7648035 | None:intergenic | 25.0% |
| ! | CCTTTAATTCACTATTCATT+AGG | + | chr3_2:7648019-7648038 | None:intergenic | 25.0% |
| ! | CCTAATGAATAGTGAATTAA+AGG | - | chr3_2:7648016-7648035 | Msa0393550:intron | 25.0% |
| ! | ATGAATAGTGAATTAAAGGA+TGG | - | chr3_2:7648020-7648039 | Msa0393550:intron | 25.0% |
| ! | TGAATAGTGAATTAAAGGAT+GGG | - | chr3_2:7648021-7648040 | Msa0393550:intron | 25.0% |
| !! | ATGGATTTTAAACCAAAAAC+AGG | + | chr3_2:7648083-7648102 | None:intergenic | 25.0% |
| ! | TCACAATGTCTATATATGTA+CGG | + | chr3_2:7648305-7648324 | None:intergenic | 25.0% |
| ! | ATTTGTTCTTAGATAATCTC+TGG | - | chr3_2:7648596-7648615 | Msa0393550:intron | 25.0% |
| ! | TTTGTTCTTAGATAATCTCT+GGG | - | chr3_2:7648597-7648616 | Msa0393550:intron | 25.0% |
| ! | TTCATTCATGTGATGTATAA+TGG | + | chr3_2:7649064-7649083 | None:intergenic | 25.0% |
| !!! | AGAAGATATTTTTACAGTGA+TGG | - | chr3_2:7649150-7649169 | Msa0393550:CDS | 25.0% |
| !! | ATGATGTGTTGTTATGTATA+TGG | - | chr3_2:7649347-7649366 | Msa0393550:CDS | 25.0% |
| !!! | TATTATTTTAAGCCCTTCTT+AGG | + | chr3_2:7649399-7649418 | None:intergenic | 25.0% |
| ! | AAGACAATAAATAGTAGAGT+GGG | + | chr3_2:7649487-7649506 | None:intergenic | 25.0% |
| ! | TATCAGATAAATAGTTACTC+AGG | + | chr3_2:7649510-7649529 | None:intergenic | 25.0% |
| !!! | TGGTTTTGAAATTAACGTTA+AGG | - | chr3_2:7649770-7649789 | Msa0393550:intron | 25.0% |
| ! | AAGTTATTAATACAGTCAAG+AGG | - | chr3_2:7649912-7649931 | Msa0393550:intron | 25.0% |
| !!! | ATGGTAAATGTTTTGCTTTT+TGG | + | chr3_2:7650045-7650064 | None:intergenic | 25.0% |
| ! | TATTGAGAAATAGGAACAAA+TGG | + | chr3_2:7650064-7650083 | None:intergenic | 25.0% |
| ! | CATGTTACACAGATAATATA+AGG | + | chr3_2:7650125-7650144 | None:intergenic | 25.0% |
| ! | TGATGGTTCAAATATTTGTT+CGG | - | chr3_2:7650394-7650413 | Msa0393550:CDS | 25.0% |
| ! | ACGATTGTAAAAAGAAATGA+TGG | + | chr3_2:7650434-7650453 | None:intergenic | 25.0% |
| ! | GTAATACTTAGATCTTCATT+GGG | + | chr3_2:7650707-7650726 | None:intergenic | 25.0% |
| ! | TGTAATACTTAGATCTTCAT+TGG | + | chr3_2:7650708-7650727 | None:intergenic | 25.0% |
| ! | ATTTGATGTATTTCTTGAAC+AGG | - | chr3_2:7650777-7650796 | Msa0393550:intron | 25.0% |
| ! | AGATAAATAGAACTTATCAG+AGG | - | chr3_2:7650904-7650923 | Msa0393550:intron | 25.0% |
| ! | TAGAAAAACTAGCAAATTTC+TGG | + | chr3_2:7651371-7651390 | None:intergenic | 25.0% |
| !! | TGCATTGTGAACTATAATTT+TGG | - | chr3_2:7651523-7651542 | Msa0393550:intron | 25.0% |
| !! | GCATTGTGAACTATAATTTT+GGG | - | chr3_2:7651524-7651543 | Msa0393550:intron | 25.0% |
| !!! | TGAACTATAATTTTGGGTTA+TGG | - | chr3_2:7651530-7651549 | Msa0393550:intron | 25.0% |
| ! | TAAATTAGACTCAATAATGC+TGG | + | chr3_2:7651826-7651845 | None:intergenic | 25.0% |
| ! | GCATTATTGAGTCTAATTTA+AGG | - | chr3_2:7651826-7651845 | Msa0393550:CDS | 25.0% |
| ! | TGTCACTATGGAATAAAATA+AGG | + | chr3_2:7651878-7651897 | None:intergenic | 25.0% |
| AAGATAATTTACCGGAACTT+GGG | + | chr3_2:7645882-7645901 | None:intergenic | 30.0% | |
| AAAGATAATTTACCGGAACT+TGG | + | chr3_2:7645883-7645902 | None:intergenic | 30.0% | |
| TGGTGCAAAAGATAATTTAC+CGG | + | chr3_2:7645890-7645909 | None:intergenic | 30.0% | |
| CACATGCAACAAAAAAAAGT+TGG | + | chr3_2:7645910-7645929 | None:intergenic | 30.0% | |
| CATAAATCATAACAGAACAC+AGG | + | chr3_2:7646596-7646615 | None:intergenic | 30.0% | |
| TGCAAATAACAAGAATAGAG+CGG | + | chr3_2:7646747-7646766 | None:intergenic | 30.0% | |
| TTGTGTTCTGTTATGATTTC+GGG | - | chr3_2:7646810-7646829 | Msa0393550:intron | 30.0% | |
| TTAGGTGAAGAGATTGTTTA+TGG | - | chr3_2:7646876-7646895 | Msa0393550:intron | 30.0% | |
| GTGGATATACCAATTATCAT+AGG | - | chr3_2:7647189-7647208 | Msa0393550:intron | 30.0% | |
| AACAAAACCAGAACAGTTTA+AGG | + | chr3_2:7647277-7647296 | None:intergenic | 30.0% | |
| !!! | AACTGTTCTGGTTTTGTTAT+TGG | - | chr3_2:7647279-7647298 | Msa0393550:intron | 30.0% |
| AATGTTCAAACTAGGACATA+AGG | + | chr3_2:7647431-7647450 | None:intergenic | 30.0% | |
| TATTTGTGCAGTATATATGG+GGG | - | chr3_2:7647467-7647486 | Msa0393550:intron | 30.0% | |
| !!! | ATATGTTTTTTGGTTACCTG+GGG | - | chr3_2:7647510-7647529 | Msa0393550:intron | 30.0% |
| CTTAAAACAACTTATGCTCA+TGG | - | chr3_2:7647710-7647729 | Msa0393550:intron | 30.0% | |
| ACTTATTTGAGCTTATCAAC+TGG | + | chr3_2:7647785-7647804 | None:intergenic | 30.0% | |
| ! | TCAAGTATTAAGGGTTTGTT+TGG | + | chr3_2:7647812-7647831 | None:intergenic | 30.0% |
| ! | TGGTTTAAAATCCATGCTAT+AGG | - | chr3_2:7648088-7648107 | Msa0393550:intron | 30.0% |
| TAGTATAGACTGTACCAAAA+GGG | + | chr3_2:7648399-7648418 | None:intergenic | 30.0% | |
| TTAGTATAGACTGTACCAAA+AGG | + | chr3_2:7648400-7648419 | None:intergenic | 30.0% | |
| ! | AGAACTGGAAAATTTGTTCA+AGG | - | chr3_2:7648513-7648532 | Msa0393550:intron | 30.0% |
| ! | TGGAAAATTTGTTCAAGGTT+TGG | - | chr3_2:7648518-7648537 | Msa0393550:intron | 30.0% |
| TTGTTCTTAGATAATCTCTG+GGG | - | chr3_2:7648598-7648617 | Msa0393550:intron | 30.0% | |
| AATAGTCAAATCTATGCTAG+TGG | - | chr3_2:7648769-7648788 | Msa0393550:intron | 30.0% | |
| TGAATTTCTCGATGTAAATG+TGG | - | chr3_2:7648838-7648857 | Msa0393550:intron | 30.0% | |
| TGCAAGTACATTATATAGGA+TGG | + | chr3_2:7648884-7648903 | None:intergenic | 30.0% | |
| !! | ATTTTATTGAAGCATCACAG+AGG | + | chr3_2:7648998-7649017 | None:intergenic | 30.0% |
| ACTTTGCAACAAATGCAATA+AGG | - | chr3_2:7649098-7649117 | Msa0393550:intron | 30.0% | |
| CTTTGCAACAAATGCAATAA+GGG | - | chr3_2:7649099-7649118 | Msa0393550:intron | 30.0% | |
| AACAAATGCAATAAGGGAAA+AGG | - | chr3_2:7649105-7649124 | Msa0393550:intron | 30.0% | |
| GAACAAAACAAACCAATAAG+AGG | + | chr3_2:7649303-7649322 | None:intergenic | 30.0% | |
| GAAGACAATAAATAGTAGAG+TGG | + | chr3_2:7649488-7649507 | None:intergenic | 30.0% | |
| AGCAAAATATGTCTTCTCTT+TGG | - | chr3_2:7649532-7649551 | Msa0393550:intron | 30.0% | |
| AAATAAAAATGTGCGTTTCC+AGG | - | chr3_2:7649594-7649613 | Msa0393550:intron | 30.0% | |
| ACATTTGTTTGTGGCAAAAA+TGG | - | chr3_2:7649625-7649644 | Msa0393550:intron | 30.0% | |
| AGCATGATCTTATAGATTAG+TGG | - | chr3_2:7650177-7650196 | Msa0393550:intron | 30.0% | |
| GATGCAAAGAAAGAAATGTT+TGG | - | chr3_2:7650367-7650386 | Msa0393550:CDS | 30.0% | |
| AAGAAATGTTTGGTATGTGA+TGG | - | chr3_2:7650377-7650396 | Msa0393550:CDS | 30.0% | |
| AAATATGTCATTCTCACAAG+AGG | + | chr3_2:7650465-7650484 | None:intergenic | 30.0% | |
| AAAGACTTTCATTTGCTTAC+AGG | - | chr3_2:7650570-7650589 | Msa0393550:intron | 30.0% | |
| !! | ACTTATCAGAGGTGTTTAAA+TGG | - | chr3_2:7650915-7650934 | Msa0393550:intron | 30.0% |
| !! | CTTATCAGAGGTGTTTAAAT+GGG | - | chr3_2:7650916-7650935 | Msa0393550:intron | 30.0% |
| ! | CTCTAATTTTGTAAACGGTT+AGG | - | chr3_2:7651248-7651267 | Msa0393550:intron | 30.0% |
| ATTATGACCCACAATAAGTT+TGG | - | chr3_2:7651444-7651463 | Msa0393550:intron | 30.0% | |
| GAAAGAAAGGTAAAAGATGT+AGG | + | chr3_2:7651597-7651616 | None:intergenic | 30.0% | |
| TTCCAAGATACACGAATTTA+CGG | - | chr3_2:7651711-7651730 | Msa0393550:intron | 30.0% | |
| ATCAATGTGATTAACTATCC+CGG | - | chr3_2:7651785-7651804 | Msa0393550:CDS | 30.0% | |
| ! | AAGTACTCTGAGAGAATCAA+GGG | + | chr3_2:7645719-7645738 | None:intergenic | 35.0% |
| TGTTTGATGAAATGCAGCAA+TGG | - | chr3_2:7645794-7645813 | Msa0393550:three_prime_UTR | 35.0% | |
| GTTTGATGAAATGCAGCAAT+GGG | - | chr3_2:7645795-7645814 | Msa0393550:three_prime_UTR | 35.0% | |
| AAATTCGTGAAACCACGTTT+AGG | - | chr3_2:7645839-7645858 | Msa0393550:exon | 35.0% | |
| AGATAATTTACCGGAACTTG+GGG | + | chr3_2:7645881-7645900 | None:intergenic | 35.0% | |
| ! | TATTATAGGTGATGACGTGT+TGG | + | chr3_2:7645981-7646000 | None:intergenic | 35.0% |
| CTACATTGAGTTTATCGTGT+TGG | + | chr3_2:7646316-7646335 | None:intergenic | 35.0% | |
| ATTAGAGATCAAGAGAGAGT+AGG | - | chr3_2:7646401-7646420 | Msa0393550:intron | 35.0% | |
| TTAGAGATCAAGAGAGAGTA+GGG | - | chr3_2:7646402-7646421 | Msa0393550:intron | 35.0% | |
| CTTCATATTGTGGTATTTGC+AGG | + | chr3_2:7646493-7646512 | None:intergenic | 35.0% | |
| AATATGAAGAGCAGATCAGA+TGG | - | chr3_2:7646504-7646523 | Msa0393550:intron | 35.0% | |
| CTTCTTCTGCTTCTAACAAT+TGG | + | chr3_2:7646538-7646557 | None:intergenic | 35.0% | |
| CAATTGTTAGAAGCAGAAGA+AGG | - | chr3_2:7646536-7646555 | Msa0393550:intron | 35.0% | |
| AATCTCACCACAAGAAAAAG+AGG | + | chr3_2:7646858-7646877 | None:intergenic | 35.0% | |
| ! | CTTTTTCTTGTGGTGAGATT+AGG | - | chr3_2:7646858-7646877 | Msa0393550:intron | 35.0% |
| ATTGTTTATGGTGCAGTTTC+TGG | - | chr3_2:7646888-7646907 | Msa0393550:intron | 35.0% | |
| GGCAGATTTGAAAAAGAAAG+AGG | - | chr3_2:7647229-7647248 | Msa0393550:intron | 35.0% | |
| AAAAAGAAAGAGGTAAGGAC+TGG | - | chr3_2:7647239-7647258 | Msa0393550:intron | 35.0% | |
| GATCAAGCAATGTTCAAACT+AGG | + | chr3_2:7647439-7647458 | None:intergenic | 35.0% | |
| GTTTGAACATTGCTTGATCT+TGG | - | chr3_2:7647440-7647459 | Msa0393550:intron | 35.0% | |
| !!! | TATGTTTTTTGGTTACCTGG+GGG | - | chr3_2:7647511-7647530 | Msa0393550:intron | 35.0% |
| ! | AAAAGGTATGTGACTCCATT+AGG | + | chr3_2:7647956-7647975 | None:intergenic | 35.0% |
| ! | ATGAAATGCTGACCTGTTTT+TGG | - | chr3_2:7648068-7648087 | Msa0393550:intron | 35.0% |
| ! | ATGACAGCAATTGGAAGTAT+TGG | - | chr3_2:7648155-7648174 | Msa0393550:intron | 35.0% |
| ! | GCAATCTTTTCATCATCTGA+AGG | + | chr3_2:7648206-7648225 | None:intergenic | 35.0% |
| AATCACGCGTCAATAATTGA+TGG | - | chr3_2:7648245-7648264 | Msa0393550:intron | 35.0% | |
| ! | AAACTCACAAGAGTGTATTG+AGG | + | chr3_2:7648337-7648356 | None:intergenic | 35.0% |
| AGTATAGACTGTACCAAAAG+GGG | + | chr3_2:7648398-7648417 | None:intergenic | 35.0% | |
| GAAAAATTGTGATAACCGAC+AGG | - | chr3_2:7648465-7648484 | Msa0393550:intron | 35.0% | |
| TGCTACTAGTGAAATAGAAC+TGG | - | chr3_2:7648498-7648517 | Msa0393550:intron | 35.0% | |
| CGGATGCAAGTACATTATAT+AGG | + | chr3_2:7648888-7648907 | None:intergenic | 35.0% | |
| AAATGCAATAAGGGAAAAGG+AGG | - | chr3_2:7649108-7649127 | Msa0393550:intron | 35.0% | |
| ! | TTATTGCAGCTTGTTTAGCA+TGG | - | chr3_2:7649197-7649216 | Msa0393550:intron | 35.0% |
| GATGATGTAAGACCTCTTAT+TGG | - | chr3_2:7649288-7649307 | Msa0393550:CDS | 35.0% | |
| ACTAAGGTTAAGACCTAAGA+AGG | - | chr3_2:7649383-7649402 | Msa0393550:CDS | 35.0% | |
| CTAAGGTTAAGACCTAAGAA+GGG | - | chr3_2:7649384-7649403 | Msa0393550:CDS | 35.0% | |
| TAGTAGAGTGGGTAATTACT+TGG | + | chr3_2:7649476-7649495 | None:intergenic | 35.0% | |
| TTTGTTTGTGGCAAAAATGG+TGG | - | chr3_2:7649628-7649647 | Msa0393550:intron | 35.0% | |
| AAGGATGTGGATATTTGCAT+TGG | - | chr3_2:7649679-7649698 | Msa0393550:intron | 35.0% | |
| ! | TTATGTTTCTGCACTACATC+AGG | - | chr3_2:7649814-7649833 | Msa0393550:intron | 35.0% |
| TGAATTCTTATAGCACATCG+TGG | - | chr3_2:7649889-7649908 | Msa0393550:intron | 35.0% | |
| ! | TATATTTTCAACTGCTACGC+CGG | - | chr3_2:7649944-7649963 | Msa0393550:intron | 35.0% |
| TATCAACTCAAGTACAACAC+TGG | + | chr3_2:7650001-7650020 | None:intergenic | 35.0% | |
| GTTGCTTGCATTCACAATAT+TGG | - | chr3_2:7650220-7650239 | Msa0393550:intron | 35.0% | |
| ! | ATATGATGGGACTTGTAACA+GGG | + | chr3_2:7650599-7650618 | None:intergenic | 35.0% |
| AACAGGCATTTATTACAAGC+TGG | - | chr3_2:7650794-7650813 | Msa0393550:intron | 35.0% | |
| AATAAAAGCTACTAACCTGC+AGG | + | chr3_2:7650864-7650883 | None:intergenic | 35.0% | |
| ! | TGTCTGGCTAGTGAATTTTT+CGG | + | chr3_2:7651026-7651045 | None:intergenic | 35.0% |
| !!! | GTGATTTTTTTTGGTGTCCA+TGG | - | chr3_2:7651216-7651235 | Msa0393550:intron | 35.0% |
| AATTAGAGAAAACGAGACCA+TGG | + | chr3_2:7651236-7651255 | None:intergenic | 35.0% | |
| !! | TGTGGCTTTATTAGTAGTGA+GGG | + | chr3_2:7651311-7651330 | None:intergenic | 35.0% |
| !! | ATGTGGCTTTATTAGTAGTG+AGG | + | chr3_2:7651312-7651331 | None:intergenic | 35.0% |
| CTAATAAAGCCACATCTTTC+TGG | - | chr3_2:7651317-7651336 | Msa0393550:intron | 35.0% | |
| ATACACTTCCAAACTGATGT+AGG | - | chr3_2:7651396-7651415 | Msa0393550:intron | 35.0% | |
| TACACTTCCAAACTGATGTA+GGG | - | chr3_2:7651397-7651416 | Msa0393550:intron | 35.0% | |
| TATTGTGGGTCATAATTGCA+TGG | + | chr3_2:7651440-7651459 | None:intergenic | 35.0% | |
| !!! | CTTATTTTTGGGATAGACCA+AGG | + | chr3_2:7651475-7651494 | None:intergenic | 35.0% |
| TATAGTTCACAATGCACATC+AGG | + | chr3_2:7651519-7651538 | None:intergenic | 35.0% | |
| AAAGGTAAAAGATGTAGGCA+TGG | + | chr3_2:7651592-7651611 | None:intergenic | 35.0% | |
| AAAACAGAGGCAAGAAAGAA+AGG | + | chr3_2:7651610-7651629 | None:intergenic | 35.0% | |
| ! | TTCTTTCTTGCCTCTGTTTT+AGG | - | chr3_2:7651610-7651629 | Msa0393550:intron | 35.0% |
| TTTCCAAATCTTCCCTTGTA+TGG | + | chr3_2:7651659-7651678 | None:intergenic | 35.0% | |
| TTATAGCTCTCCATTCTATC+AGG | - | chr3_2:7651753-7651772 | Msa0393550:intron | 35.0% | |
| TGCAATTCATCCTGATAGAA+TGG | + | chr3_2:7651766-7651785 | None:intergenic | 35.0% | |
| TAAGGACATTGCATTTGTAG+TGG | - | chr3_2:7651844-7651863 | Msa0393550:CDS | 35.0% | |
| ! | GACAAAATAGCTTGTCACTA+TGG | + | chr3_2:7651890-7651909 | None:intergenic | 35.0% |
| !! | CATGCACTTGGTATTGGTAT+TGG | + | chr3_2:7645664-7645683 | None:intergenic | 40.0% |
| CAATACCAATACCAAGTGCA+TGG | - | chr3_2:7645662-7645681 | Msa0393550:three_prime_UTR | 40.0% | |
| AAGTGCATGGTGGCAAAAAT+GGG | - | chr3_2:7645675-7645694 | Msa0393550:three_prime_UTR | 40.0% | |
| ! | GAAGTACTCTGAGAGAATCA+AGG | + | chr3_2:7645720-7645739 | None:intergenic | 40.0% |
| ! | GGTAAATGATGATGCGTTTG+AGG | - | chr3_2:7645771-7645790 | Msa0393550:three_prime_UTR | 40.0% |
| GTGAAACCACGTTTAGGAAA+TGG | - | chr3_2:7645845-7645864 | Msa0393550:exon | 40.0% | |
| ATGCATCCATTTCCTAAACG+TGG | + | chr3_2:7645854-7645873 | None:intergenic | 40.0% | |
| GATGTTACAAGACTGAGTGT+TGG | - | chr3_2:7646282-7646301 | Msa0393550:intron | 40.0% | |
| TGAAGATGAGAATGCTATGC+TGG | - | chr3_2:7646336-7646355 | Msa0393550:intron | 40.0% | |
| GTGGAAATGGTAGATGAGAA+AGG | - | chr3_2:7646363-7646382 | Msa0393550:intron | 40.0% | |
| TAGAGATCAAGAGAGAGTAG+GGG | - | chr3_2:7646403-7646422 | Msa0393550:intron | 40.0% | |
| ! | TTTGGTAATTTGGGTGTGTG+TGG | - | chr3_2:7646463-7646482 | Msa0393550:intron | 40.0% |
| CTGATCTGCTCTTCATATTG+TGG | + | chr3_2:7646503-7646522 | None:intergenic | 40.0% | |
| ! | AAGTCTTATCACACTAGGTG+GGG | + | chr3_2:7646656-7646675 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCACACTAGGT+GGG | + | chr3_2:7646657-7646676 | None:intergenic | 40.0% |
| ! | CAACCAAGTCTTATCACACT+AGG | + | chr3_2:7646661-7646680 | None:intergenic | 40.0% |
| ! | TTTCTGGTGATGATGAAGCA+GGG | - | chr3_2:7646904-7646923 | Msa0393550:intron | 40.0% |
| TGTTCTTGAGCTGCCTAATA+TGG | + | chr3_2:7647137-7647156 | None:intergenic | 40.0% | |
| TATTAGGCAGCTCAAGAACA+TGG | - | chr3_2:7647137-7647156 | Msa0393550:intron | 40.0% | |
| ATTAGGCAGCTCAAGAACAT+GGG | - | chr3_2:7647138-7647157 | Msa0393550:intron | 40.0% | |
| CTCTAGCTGCCTATGATAAT+TGG | + | chr3_2:7647201-7647220 | None:intergenic | 40.0% | |
| GAGAACTCCTTAAACTGTTC+TGG | - | chr3_2:7647267-7647286 | Msa0393550:intron | 40.0% | |
| AAAACAACAACAATTCCCCC+AGG | + | chr3_2:7647529-7647548 | None:intergenic | 40.0% | |
| AAGCACGTGTGAGACTATTT+GGG | + | chr3_2:7647759-7647778 | None:intergenic | 40.0% | |
| TAAGCACGTGTGAGACTATT+TGG | + | chr3_2:7647760-7647779 | None:intergenic | 40.0% | |
| AAGAAGGCAATCCTATAGCA+TGG | + | chr3_2:7648102-7648121 | None:intergenic | 40.0% | |
| CAAATCCTGTAGGACAAAGA+AGG | + | chr3_2:7648118-7648137 | None:intergenic | 40.0% | |
| ATATTGGCAGCAAATCCTGT+AGG | + | chr3_2:7648128-7648147 | None:intergenic | 40.0% | |
| !! | TACAGGATTTGCTGCCAATA+TGG | - | chr3_2:7648127-7648146 | Msa0393550:intron | 40.0% |
| ACTTCCAATTGCTGTCATCA+AGG | + | chr3_2:7648153-7648172 | None:intergenic | 40.0% | |
| !! | AGTATTGGTTCTCTCTTAGC+TGG | - | chr3_2:7648170-7648189 | Msa0393550:intron | 40.0% |
| !! | GTATTGGTTCTCTCTTAGCT+GGG | - | chr3_2:7648171-7648190 | Msa0393550:intron | 40.0% |
| ! | TCACAAGAGTGTATTGAGGT+GGG | + | chr3_2:7648333-7648352 | None:intergenic | 40.0% |
| ! | TTCATTCCCTATTCCCCTTT+TGG | - | chr3_2:7648382-7648401 | Msa0393550:CDS | 40.0% |
| ACTGTACCAAAAGGGGAATA+GGG | + | chr3_2:7648391-7648410 | None:intergenic | 40.0% | |
| TAGCAGAATGACTAACCTGT+CGG | + | chr3_2:7648483-7648502 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATCACACGTGA+TGG | - | chr3_2:7648648-7648667 | Msa0393550:intron | 40.0% |
| ! | CAAGCATTGTCTCTTCTCTA+CGG | + | chr3_2:7648908-7648927 | None:intergenic | 40.0% |
| ACAAAAAGCCATGCTTCTTG+CGG | + | chr3_2:7649260-7649279 | None:intergenic | 40.0% | |
| !! | ATGTATATGGTTCTGATCCC+CGG | - | chr3_2:7649360-7649379 | Msa0393550:CDS | 40.0% |
| TTAGGTCTTAACCTTAGTCC+GGG | + | chr3_2:7649381-7649400 | None:intergenic | 40.0% | |
| CTTAGGTCTTAACCTTAGTC+CGG | + | chr3_2:7649382-7649401 | None:intergenic | 40.0% | |
| AGTGGGTAATTACTTGGAGT+GGG | + | chr3_2:7649470-7649489 | None:intergenic | 40.0% | |
| TGAGGAGTTCAATTGTGAGA+AGG | - | chr3_2:7649660-7649679 | Msa0393550:intron | 40.0% | |
| GTTCAATTGTGAGAAGGATG+TGG | - | chr3_2:7649666-7649685 | Msa0393550:intron | 40.0% | |
| TGCAAGCTATAAATCCTCCA+TGG | + | chr3_2:7649729-7649748 | None:intergenic | 40.0% | |
| ! | ATGGAGGATTTATAGCTTGC+AGG | - | chr3_2:7649728-7649747 | Msa0393550:intron | 40.0% |
| GTAAACTATCTGTGTACACG+TGG | - | chr3_2:7649750-7649769 | Msa0393550:intron | 40.0% | |
| ACGATCGGTATGAAGGATAA+GGG | + | chr3_2:7650097-7650116 | None:intergenic | 40.0% | |
| AACGATCGGTATGAAGGATA+AGG | + | chr3_2:7650098-7650117 | None:intergenic | 40.0% | |
| GGATATAACGATCGGTATGA+AGG | + | chr3_2:7650104-7650123 | None:intergenic | 40.0% | |
| AGATCATGCTAGAAGTGAGA+GGG | + | chr3_2:7650167-7650186 | None:intergenic | 40.0% | |
| AAGATCATGCTAGAAGTGAG+AGG | + | chr3_2:7650168-7650187 | None:intergenic | 40.0% | |
| TGTGAATGCAAGCAACAATC+AGG | + | chr3_2:7650216-7650235 | None:intergenic | 40.0% | |
| GACTGCTTGAGTTCATATGA+AGG | - | chr3_2:7650242-7650261 | Msa0393550:intron | 40.0% | |
| GCAAATGAAAGTCTTTCACC+CGG | + | chr3_2:7650566-7650585 | None:intergenic | 40.0% | |
| ! | GATATGATGGGACTTGTAAC+AGG | + | chr3_2:7650600-7650619 | None:intergenic | 40.0% |
| CCAACGATAAGGGATATGAT+GGG | + | chr3_2:7650612-7650631 | None:intergenic | 40.0% | |
| ! | ACTTTCCCTCCCATCATTTT+TGG | - | chr3_2:7650679-7650698 | Msa0393550:CDS | 40.0% |
| CATTGGGCACCAAAAATGAT+GGG | + | chr3_2:7650691-7650710 | None:intergenic | 40.0% | |
| TCATTGGGCACCAAAAATGA+TGG | + | chr3_2:7650692-7650711 | None:intergenic | 40.0% | |
| !! | ATGATCAGCTTCTGAAGTAG+TGG | + | chr3_2:7650736-7650755 | None:intergenic | 40.0% |
| !! | GCTCGTAACTGTTTCTACAT+TGG | - | chr3_2:7650990-7651009 | Msa0393550:intron | 40.0% |
| !! | GCTAGTGAATTTTTCGGCTA+GGG | + | chr3_2:7651020-7651039 | None:intergenic | 40.0% |
| TTGACTGAGTCATTTGTGTC+TGG | + | chr3_2:7651042-7651061 | None:intergenic | 40.0% | |
| ! | TTTTCGTGAGAAGCGACTAA+AGG | - | chr3_2:7651135-7651154 | Msa0393550:intron | 40.0% |
| AGCGACTAAAGGATAGAGTA+AGG | - | chr3_2:7651146-7651165 | Msa0393550:intron | 40.0% | |
| GCGACTAAAGGATAGAGTAA+GGG | - | chr3_2:7651147-7651166 | Msa0393550:intron | 40.0% | |
| AGGATAGAGTAAGGGATAAC+TGG | - | chr3_2:7651155-7651174 | Msa0393550:intron | 40.0% | |
| ! | GCTTTATTAGTAGTGAGGGT+GGG | + | chr3_2:7651307-7651326 | None:intergenic | 40.0% |
| ! | TCTTTCTGGAAGTGCACAAT+CGG | - | chr3_2:7651331-7651350 | Msa0393550:intron | 40.0% |
| GGTTAGGCCAAACTTATTGT+GGG | + | chr3_2:7651454-7651473 | None:intergenic | 40.0% | |
| AGGTTAGGCCAAACTTATTG+TGG | + | chr3_2:7651455-7651474 | None:intergenic | 40.0% | |
| CAATAAGTTTGGCCTAACCT+TGG | - | chr3_2:7651455-7651474 | Msa0393550:intron | 40.0% | |
| !!! | TTTTGGGATAGACCAAGGTT+AGG | + | chr3_2:7651470-7651489 | None:intergenic | 40.0% |
| !! | TGGCTGGACAGCTTATTTTT+GGG | + | chr3_2:7651486-7651505 | None:intergenic | 40.0% |
| !! | ATGGCTGGACAGCTTATTTT+TGG | + | chr3_2:7651487-7651506 | None:intergenic | 40.0% |
| AGTCCATACAAGGGAAGATT+TGG | - | chr3_2:7651653-7651672 | Msa0393550:intron | 40.0% | |
| ATTGATGCAATTCGAGAGTG+CGG | + | chr3_2:7651691-7651710 | None:intergenic | 40.0% | |
| AGCCGTAAATTCGTGTATCT+TGG | + | chr3_2:7651716-7651735 | None:intergenic | 40.0% | |
| ACTCAATAATGCTGGCAATG+GGG | + | chr3_2:7651818-7651837 | None:intergenic | 40.0% | |
| GACTCAATAATGCTGGCAAT+GGG | + | chr3_2:7651819-7651838 | None:intergenic | 40.0% | |
| AGACTCAATAATGCTGGCAA+TGG | + | chr3_2:7651820-7651839 | None:intergenic | 40.0% | |
| TACCAATACCAAGTGCATGG+TGG | - | chr3_2:7645665-7645684 | Msa0393550:three_prime_UTR | 45.0% | |
| ! | CATTTTTGCCACCATGCACT+TGG | + | chr3_2:7645676-7645695 | None:intergenic | 45.0% |
| CAAGTGCATGGTGGCAAAAA+TGG | - | chr3_2:7645674-7645693 | Msa0393550:three_prime_UTR | 45.0% | |
| CATCATCATTTACCCCACGT+TGG | + | chr3_2:7645765-7645784 | None:intergenic | 45.0% | |
| ATGGGATCGTTCTTCTGTTG+AGG | - | chr3_2:7645813-7645832 | Msa0393550:three_prime_UTR | 45.0% | |
| ATGCATGATACCCCAAGTTC+CGG | - | chr3_2:7645868-7645887 | Msa0393550:CDS | 45.0% | |
| CGGTGTGTTATGTCTTGTGT+GGG | + | chr3_2:7645946-7645965 | None:intergenic | 45.0% | |
| CCACACAAGACATAACACAC+CGG | - | chr3_2:7645944-7645963 | Msa0393550:CDS | 45.0% | |
| AGAATGCTATGCTGGATGAG+TGG | - | chr3_2:7646344-7646363 | Msa0393550:intron | 45.0% | |
| CTATGCTGGATGAGTGGAAA+TGG | - | chr3_2:7646350-7646369 | Msa0393550:intron | 45.0% | |
| ! | CCAAGTCTTATCACACTAGG+TGG | + | chr3_2:7646658-7646677 | None:intergenic | 45.0% |
| CCACCTAGTGTGATAAGACT+TGG | - | chr3_2:7646655-7646674 | Msa0393550:intron | 45.0% | |
| !! | GTTTCTGGTGATGATGAAGC+AGG | - | chr3_2:7646903-7646922 | Msa0393550:intron | 45.0% |
| TTCCCATCCGACTATTGGAA+AGG | - | chr3_2:7646989-7647008 | Msa0393550:CDS | 45.0% | |
| AGCCTTTCCAATAGTCGGAT+GGG | + | chr3_2:7646994-7647013 | None:intergenic | 45.0% | |
| TATTGGAAAGGCTGCTGCAA+AGG | - | chr3_2:7647001-7647020 | Msa0393550:CDS | 45.0% | |
| CAAATAAGAGCAGAACCCCT+TGG | + | chr3_2:7647170-7647189 | None:intergenic | 45.0% | |
| ! | AGGGGTTCTGCTCTTATTTG+TGG | - | chr3_2:7647170-7647189 | Msa0393550:intron | 45.0% |
| ATGGGGGAAAGTGATGTTCA+AGG | - | chr3_2:7647483-7647502 | Msa0393550:intron | 45.0% | |
| GATTGCCTTCTTTGTCCTAC+AGG | - | chr3_2:7648110-7648129 | Msa0393550:intron | 45.0% | |
| TGCTGTCATCAAGGCCATAT+TGG | + | chr3_2:7648144-7648163 | None:intergenic | 45.0% | |
| ! | ATGGCCTTGATGACAGCAAT+TGG | - | chr3_2:7648146-7648165 | Msa0393550:intron | 45.0% |
| ATGGTATTCGTCTTGCTGAG+CGG | - | chr3_2:7648264-7648283 | Msa0393550:intron | 45.0% | |
| ! | CTCACAAGAGTGTATTGAGG+TGG | + | chr3_2:7648334-7648353 | None:intergenic | 45.0% |
| GACTGTACCAAAAGGGGAAT+AGG | + | chr3_2:7648392-7648411 | None:intergenic | 45.0% | |
| ! | CAGTGATGGTGTGTGCATTA+TGG | - | chr3_2:7649164-7649183 | Msa0393550:intron | 45.0% |
| ! | TGCAGCTTGTTTAGCATGGA+TGG | - | chr3_2:7649201-7649220 | Msa0393550:intron | 45.0% |
| ! | GCAGCTTGTTTAGCATGGAT+GGG | - | chr3_2:7649202-7649221 | Msa0393550:intron | 45.0% |
| ! | CAGCTTGTTTAGCATGGATG+GGG | - | chr3_2:7649203-7649222 | Msa0393550:intron | 45.0% |
| AGTTCTGCAAGCTCAACCAT+TGG | + | chr3_2:7649237-7649256 | None:intergenic | 45.0% | |
| TAGGTCTTAACCTTAGTCCG+GGG | + | chr3_2:7649380-7649399 | None:intergenic | 45.0% | |
| GAGTGGGTAATTACTTGGAG+TGG | + | chr3_2:7649471-7649490 | None:intergenic | 45.0% | |
| AAACAAATGTCCCATGAGCC+TGG | + | chr3_2:7649615-7649634 | None:intergenic | 45.0% | |
| GCTCATGGGACATTTGTTTG+TGG | - | chr3_2:7649616-7649635 | Msa0393550:intron | 45.0% | |
| GGTACACTAAGTAAAGCTGC+CGG | - | chr3_2:7649700-7649719 | Msa0393550:intron | 45.0% | |
| TATAAATCCTCCATGGCAGC+CGG | + | chr3_2:7649722-7649741 | None:intergenic | 45.0% | |
| ! | TTTTGCAGCTGCTGTTAGAG+TGG | - | chr3_2:7650503-7650522 | Msa0393550:intron | 45.0% |
| GAGTGGCAAAACATGAGACA+TGG | - | chr3_2:7650520-7650539 | Msa0393550:intron | 45.0% | |
| ACATGAGACATGGCGTAGAA+AGG | - | chr3_2:7650530-7650549 | Msa0393550:intron | 45.0% | |
| ! | GTAGAAAGGCCATTTGGAAC+CGG | - | chr3_2:7650544-7650563 | Msa0393550:intron | 45.0% |
| ! | TAGAAAGGCCATTTGGAACC+GGG | - | chr3_2:7650545-7650564 | Msa0393550:intron | 45.0% |
| CCCATCATATCCCTTATCGT+TGG | - | chr3_2:7650609-7650628 | Msa0393550:CDS | 45.0% | |
| GCCAACGATAAGGGATATGA+TGG | + | chr3_2:7650613-7650632 | None:intergenic | 45.0% | |
| GTCTTCAGTGCCAACGATAA+GGG | + | chr3_2:7650622-7650641 | None:intergenic | 45.0% | |
| TGTCTTCAGTGCCAACGATA+AGG | + | chr3_2:7650623-7650642 | None:intergenic | 45.0% | |
| ! | AATGATGGGAGGGAAAGTGA+GGG | + | chr3_2:7650677-7650696 | None:intergenic | 45.0% |
| ! | AAATGATGGGAGGGAAAGTG+AGG | + | chr3_2:7650678-7650697 | None:intergenic | 45.0% |
| ACTTCAGAAGCTGATCATGC+AGG | - | chr3_2:7650738-7650757 | Msa0393550:intron | 45.0% | |
| !! | GGCTAGTGAATTTTTCGGCT+AGG | + | chr3_2:7651021-7651040 | None:intergenic | 45.0% |
| !! | GGCTTTATTAGTAGTGAGGG+TGG | + | chr3_2:7651308-7651327 | None:intergenic | 45.0% |
| TGTGCACTTCCAGAAAGATG+TGG | + | chr3_2:7651329-7651348 | None:intergenic | 45.0% | |
| ACTTCCAAACTGATGTAGGG+AGG | - | chr3_2:7651400-7651419 | Msa0393550:intron | 45.0% | |
| CTTCCAAACTGATGTAGGGA+GGG | - | chr3_2:7651401-7651420 | Msa0393550:intron | 45.0% | |
| AATAAGCTGTCCAGCCATTG+AGG | - | chr3_2:7651489-7651508 | Msa0393550:intron | 45.0% | |
| GTTCACAATGCACATCAGGT+CGG | + | chr3_2:7651515-7651534 | None:intergenic | 45.0% | |
| ACACGAATTTACGGCTGCAA+TGG | - | chr3_2:7651720-7651739 | Msa0393550:intron | 45.0% | |
| !! | TATAAAAAAAGATATTAAAA+GGG | + | chr3_2:7646126-7646145 | None:intergenic | 5.0% |
| !! | ATATAAAAAAAGATATTAAA+AGG | + | chr3_2:7646127-7646146 | None:intergenic | 5.0% |
| !!! | ATATCTTTTTTTATATATAA+AGG | - | chr3_2:7646131-7646150 | Msa0393550:intron | 5.0% |
| TGCCACCATGCACTTGGTAT+TGG | + | chr3_2:7645670-7645689 | None:intergenic | 50.0% | |
| GTGGCAAAAATGGGTCGAAG+AGG | - | chr3_2:7645684-7645703 | Msa0393550:three_prime_UTR | 50.0% | |
| GACCCATTTGTCTCCAACGT+GGG | - | chr3_2:7645749-7645768 | Msa0393550:three_prime_UTR | 50.0% | |
| ACCCATTTGTCTCCAACGTG+GGG | - | chr3_2:7645750-7645769 | Msa0393550:three_prime_UTR | 50.0% | |
| ACCCCACGTTGGAGACAAAT+GGG | + | chr3_2:7645754-7645773 | None:intergenic | 50.0% | |
| TACCCCACGTTGGAGACAAA+TGG | + | chr3_2:7645755-7645774 | None:intergenic | 50.0% | |
| CCGGTGTGTTATGTCTTGTG+TGG | + | chr3_2:7645947-7645966 | None:intergenic | 50.0% | |
| ! | CGTGTTGGCATTGTCATGTC+CGG | + | chr3_2:7645966-7645985 | None:intergenic | 50.0% |
| GACACAAGTCGAACATCACC+AGG | - | chr3_2:7646060-7646079 | Msa0393550:intron | 50.0% | |
| AAGTCGAACATCACCAGGCA+CGG | - | chr3_2:7646065-7646084 | Msa0393550:intron | 50.0% | |
| CTTATCACACTAGGTGGGGT+TGG | + | chr3_2:7646652-7646671 | None:intergenic | 50.0% | |
| CAATAGTCGGATGGGAACTC+AGG | + | chr3_2:7646986-7647005 | None:intergenic | 50.0% | |
| CTGAGTTCCCATCCGACTAT+TGG | - | chr3_2:7646984-7647003 | Msa0393550:CDS | 50.0% | |
| CAGCCTTTCCAATAGTCGGA+TGG | + | chr3_2:7646995-7647014 | None:intergenic | 50.0% | |
| GCAGCAGCCTTTCCAATAGT+CGG | + | chr3_2:7646999-7647018 | None:intergenic | 50.0% | |
| GCAGCTCAAGAACATGGGAT+GGG | - | chr3_2:7647143-7647162 | Msa0393550:intron | 50.0% | |
| AAGAACATGGGATGGGACCA+AGG | - | chr3_2:7647150-7647169 | Msa0393550:intron | 50.0% | |
| AGAACATGGGATGGGACCAA+GGG | - | chr3_2:7647151-7647170 | Msa0393550:intron | 50.0% | |
| TAGGCAGCTAGAGTCGAGTT+TGG | - | chr3_2:7647208-7647227 | Msa0393550:intron | 50.0% | |
| GTCTTGCTGAGCGGCAAAAA+GGG | - | chr3_2:7648273-7648292 | Msa0393550:intron | 50.0% | |
| TCTTGCTGAGCGGCAAAAAG+GGG | - | chr3_2:7648274-7648293 | Msa0393550:intron | 50.0% | |
| GGTACGGAATCTGTACTCGA+TGG | + | chr3_2:7649423-7649442 | None:intergenic | 50.0% | |
| AATGTGCGTTTCCAGGCTCA+TGG | - | chr3_2:7649601-7649620 | Msa0393550:intron | 50.0% | |
| ATGTGCGTTTCCAGGCTCAT+GGG | - | chr3_2:7649602-7649621 | Msa0393550:intron | 50.0% | |
| CATGGCGTAGAAAGGCCATT+TGG | - | chr3_2:7650538-7650557 | Msa0393550:intron | 50.0% | |
| GTCTTTCACCCGGTTCCAAA+TGG | + | chr3_2:7650556-7650575 | None:intergenic | 50.0% | |
| !! | ACAAAGCACTGCAAGCAAGC+CGG | - | chr3_2:7650640-7650659 | Msa0393550:CDS | 50.0% |
| ! | GGGCACCAAAAATGATGGGA+GGG | + | chr3_2:7650687-7650706 | None:intergenic | 50.0% |
| ! | TGGGCACCAAAAATGATGGG+AGG | + | chr3_2:7650688-7650707 | None:intergenic | 50.0% |
| GTGGTCTGATTGCAGTCACA+TGG | + | chr3_2:7650823-7650842 | None:intergenic | 50.0% | |
| ACTAACCTGCAGGAGTTAGG+AGG | + | chr3_2:7650854-7650873 | None:intergenic | 50.0% | |
| GCTACTAACCTGCAGGAGTT+AGG | + | chr3_2:7650857-7650876 | None:intergenic | 50.0% | |
| !! | GTGAATTTTTCGGCTAGGGC+AGG | + | chr3_2:7651016-7651035 | None:intergenic | 50.0% |
| ACTCCCTCCCTACATCAGTT+TGG | + | chr3_2:7651407-7651426 | None:intergenic | 50.0% | |
| CCACTCGCAACCTAAAACAG+AGG | + | chr3_2:7651623-7651642 | None:intergenic | 50.0% | |
| !!! | CCTCTGTTTTAGGTTGCGAG+TGG | - | chr3_2:7651620-7651639 | Msa0393550:intron | 50.0% |
| ! | CCTTGTATGGACTGCACTGA+GGG | + | chr3_2:7651646-7651665 | None:intergenic | 50.0% |
| CCTCAGTGCAGTCCATACAA+GGG | - | chr3_2:7651644-7651663 | Msa0393550:intron | 50.0% | |
| CGACCCATTTGTCTCCAACG+TGG | - | chr3_2:7645748-7645767 | Msa0393550:three_prime_UTR | 55.0% | |
| CACACTCTGTAATCCGTGCC+TGG | + | chr3_2:7646081-7646100 | None:intergenic | 55.0% | |
| GGCAGCTCAAGAACATGGGA+TGG | - | chr3_2:7647142-7647161 | Msa0393550:intron | 55.0% | |
| GAACATGGGATGGGACCAAG+GGG | - | chr3_2:7647152-7647171 | Msa0393550:intron | 55.0% | |
| CGTCTTGCTGAGCGGCAAAA+AGG | - | chr3_2:7648272-7648291 | Msa0393550:intron | 55.0% | |
| GGATGGGGACTTTGCACCAA+TGG | - | chr3_2:7649218-7649237 | Msa0393550:intron | 55.0% | |
| GCAGAACTCCGCAAGAAGCA+TGG | - | chr3_2:7649249-7649268 | Msa0393550:intron | 55.0% | |
| !! | TGGTTCTGATCCCCGGACTA+AGG | - | chr3_2:7649367-7649386 | Msa0393550:CDS | 55.0% |
| AGTGAGGGAGGGATGCATAC+CGG | + | chr3_2:7650662-7650681 | None:intergenic | 55.0% | |
| ATGGGAGGGAAAGTGAGGGA+GGG | + | chr3_2:7650673-7650692 | None:intergenic | 55.0% | |
| ! | GAGTTAGGAGGCACAGTTGG+TGG | + | chr3_2:7650842-7650861 | None:intergenic | 55.0% |
| ! | CAGGAGTTAGGAGGCACAGT+TGG | + | chr3_2:7650845-7650864 | None:intergenic | 55.0% |
| CCCTCAGTGCAGTCCATACA+AGG | - | chr3_2:7651643-7651662 | Msa0393550:intron | 55.0% | |
| ! | CCCTTGTATGGACTGCACTG+AGG | + | chr3_2:7651647-7651666 | None:intergenic | 55.0% |
| !! | TGGCAATGGGGTACTGTTCC+GGG | + | chr3_2:7651806-7651825 | None:intergenic | 55.0% |
| !! | CTGGCAATGGGGTACTGTTC+CGG | + | chr3_2:7651807-7651826 | None:intergenic | 55.0% |
| ! | AGTAAAGCTGCCGGCTGCCA+TGG | - | chr3_2:7649709-7649728 | Msa0393550:intron | 60.0% |
| GCAGCAGCAGCAACTGGAAC+CGG | + | chr3_2:7649966-7649985 | None:intergenic | 60.0% | |
| CCATGAGCAGCAGCAGCAAC+TGG | + | chr3_2:7649972-7649991 | None:intergenic | 60.0% | |
| CCAGTTGCTGCTGCTGCTCA+TGG | - | chr3_2:7649969-7649988 | Msa0393550:intron | 60.0% | |
| GATGGGAGGGAAAGTGAGGG+AGG | + | chr3_2:7650674-7650693 | None:intergenic | 60.0% | |
| CTGTGCCTCCTAACTCCTGC+AGG | - | chr3_2:7650846-7650865 | Msa0393550:intron | 60.0% | |
| ATCAGGTCGGCCTCAATGGC+TGG | + | chr3_2:7651502-7651521 | None:intergenic | 60.0% | |
| GCACATCAGGTCGGCCTCAA+TGG | + | chr3_2:7651506-7651525 | None:intergenic | 60.0% | |
| ! | AAAGCTGCCGGCTGCCATGG+AGG | - | chr3_2:7649712-7649731 | Msa0393550:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 7645652 | 7651962 | 7645652 | ID=Msa0393550;Name=Msa0393550 |
| chr3_2 | mRNA | 7645652 | 7651962 | 7645652 | ID=Msa0393550-mRNA-1;Parent=Msa0393550;Name=Msa0393550-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.9|0.81|1|0.9|0.81|11|204|465 |
| chr3_2 | exon | 7645652 | 7645982 | 7645652 | ID=Msa0393550-mRNA-1:exon:1992;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7646747 | 7646815 | 7646747 | ID=Msa0393550-mRNA-1:exon:1991;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7646953 | 7647103 | 7646953 | ID=Msa0393550-mRNA-1:exon:1990;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7647624 | 7647712 | 7647624 | ID=Msa0393550-mRNA-1:exon:1989;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7647865 | 7647998 | 7647865 | ID=Msa0393550-mRNA-1:exon:1988;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7648321 | 7648408 | 7648321 | ID=Msa0393550-mRNA-1:exon:1987;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7649128 | 7649169 | 7649128 | ID=Msa0393550-mRNA-1:exon:1986;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7649266 | 7649504 | 7649266 | ID=Msa0393550-mRNA-1:exon:1985;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7650364 | 7650471 | 7650364 | ID=Msa0393550-mRNA-1:exon:1984;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7650592 | 7650739 | 7650592 | ID=Msa0393550-mRNA-1:exon:1983;Parent=Msa0393550-mRNA-1 |
| chr3_2 | exon | 7651760 | 7651962 | 7651760 | ID=Msa0393550-mRNA-1:exon:1982;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7651760 | 7651962 | 7651760 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7650592 | 7650739 | 7650592 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7650364 | 7650471 | 7650364 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7649266 | 7649504 | 7649266 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7649128 | 7649169 | 7649128 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7648321 | 7648408 | 7648321 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7647865 | 7647998 | 7647865 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7647624 | 7647712 | 7647624 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7646953 | 7647103 | 7646953 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7646747 | 7646815 | 7646747 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | CDS | 7645856 | 7645982 | 7645856 | ID=Msa0393550-mRNA-1:cds;Parent=Msa0393550-mRNA-1 |
| chr3_2 | three_prime_UTR | 7645652 | 7645855 | 7645652 | ID=Msa0393550-mRNA-1:three_prime_utr;Parent=Msa0393550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
