Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0348990 | XP_003598166.2 | 96.421 | 475 | 15 | 1 | 1 | 475 | 1 | 473 | 0.0 | 907 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0348990 | sp|Q8GW43|BIOF_ARATH | 69.546 | 463 | 127 | 2 | 12 | 464 | 6 | 464 | 0.0 | 664 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0348990 | G7IVJ8 | 96.421 | 475 | 15 | 1 | 1 | 475 | 1 | 473 | 0.0 | 907 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002750 | Msa0348990 | 0.820852 | 5.509561e-53 | -8.615850e-47 |
Msa0002790 | Msa0348990 | 0.816834 | 4.508077e-52 | -8.615850e-47 |
Msa0086750 | Msa0348990 | 0.812081 | 5.071833e-51 | -8.615850e-47 |
Msa0116670 | Msa0348990 | 0.807797 | 4.240303e-50 | -8.615850e-47 |
Msa0173530 | Msa0348990 | 0.809517 | 1.819408e-50 | -8.615850e-47 |
Msa0189700 | Msa0348990 | 0.819066 | 1.411566e-52 | -8.615850e-47 |
Msa0232010 | Msa0348990 | 0.817542 | 3.123627e-52 | -8.615850e-47 |
Msa0232080 | Msa0348990 | 0.815800 | 7.679098e-52 | -8.615850e-47 |
Msa0262480 | Msa0348990 | 0.805466 | 1.316746e-49 | -8.615850e-47 |
Msa0300350 | Msa0348990 | 0.802164 | 6.389605e-49 | -8.615850e-47 |
Msa0348990 | Msa0393550 | 0.844811 | 6.000641e-59 | -8.615850e-47 |
Msa0348990 | Msa0462110 | 0.954781 | 1.362714e-112 | -8.615850e-47 |
Msa0348990 | Msa0488820 | 0.967659 | 1.392828e-127 | -8.615850e-47 |
Msa0348990 | Msa0588360 | 0.806941 | 6.441830e-50 | -8.615850e-47 |
Msa0348990 | Msa0881290 | 0.819935 | 8.942306e-53 | -8.615850e-47 |
Msa0348990 | Msa0953310 | 0.823197 | 1.576821e-53 | -8.615850e-47 |
Msa0348990 | Msa1019260 | 0.808757 | 2.648078e-50 | -8.615850e-47 |
Msa0348990 | Msa1104210 | 0.804916 | 1.716367e-49 | -8.615850e-47 |
Msa0348990 | Msa1215820 | 0.814096 | 1.833603e-51 | -8.615850e-47 |
Msa0348990 | Msa1257510 | 0.803598 | 3.229556e-49 | -8.615850e-47 |
Msa0348990 | Msa1338190 | 0.808379 | 3.187760e-50 | -8.615850e-47 |
Msa0348990 | Msa1343260 | 0.825251 | 5.190751e-54 | -8.615850e-47 |
Msa0348990 | Msa1426370 | 0.800721 | 1.262122e-48 | -8.615850e-47 |
Msa0348990 | Msa1426490 | 0.809956 | 1.464020e-50 | -8.615850e-47 |
Msa0348990 | Msa1432700 | 0.807765 | 4.307589e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0348990 | MtrunA17_Chr3g0078851 | 96.421 | 475 | 15 | 1 | 1 | 475 | 1 | 473 | 0.0 | 907 |
Msa0348990 | MtrunA17_Chr6g0461991 | 26.176 | 340 | 205 | 6 | 144 | 457 | 143 | 462 | 7.84e-26 | 110 |
Msa0348990 | MtrunA17_Chr3g0099931 | 23.117 | 385 | 243 | 13 | 102 | 455 | 110 | 472 | 1.06e-18 | 88.6 |
Msa0348990 | MtrunA17_Chr5g0430851 | 22.857 | 385 | 244 | 13 | 102 | 455 | 110 | 472 | 4.24e-18 | 86.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0348990 | AT5G04620.2 | 69.546 | 463 | 127 | 2 | 12 | 464 | 6 | 464 | 0.0 | 664 |
Msa0348990 | AT5G04620.3 | 69.756 | 410 | 110 | 2 | 12 | 411 | 6 | 411 | 0.0 | 583 |
Msa0348990 | AT5G04620.1 | 76.133 | 331 | 79 | 0 | 134 | 464 | 1 | 331 | 0.0 | 527 |
Msa0348990 | AT5G23670.1 | 25.982 | 331 | 199 | 7 | 144 | 448 | 143 | 453 | 5.21e-26 | 110 |
Msa0348990 | AT5G23670.2 | 25.982 | 331 | 199 | 7 | 144 | 448 | 143 | 453 | 5.21e-26 | 110 |
Msa0348990 | AT3G48780.2 | 25.982 | 331 | 199 | 7 | 144 | 448 | 143 | 453 | 2.62e-25 | 108 |
Msa0348990 | AT3G48780.1 | 25.982 | 331 | 199 | 7 | 144 | 448 | 143 | 453 | 2.62e-25 | 108 |
Msa0348990 | AT3G48790.1 | 25.994 | 327 | 203 | 9 | 141 | 448 | 4 | 310 | 1.28e-22 | 99.4 |
Msa0348990 | AT3G48790.2 | 27.170 | 265 | 168 | 8 | 203 | 448 | 20 | 278 | 1.79e-19 | 89.7 |
Msa0348990 | AT4G36480.2 | 22.628 | 274 | 182 | 8 | 102 | 365 | 109 | 362 | 7.54e-16 | 80.1 |
Msa0348990 | AT4G36480.1 | 22.628 | 274 | 182 | 8 | 102 | 365 | 109 | 362 | 7.54e-16 | 80.1 |
Msa0348990 | AT4G36480.3 | 20.492 | 244 | 166 | 5 | 102 | 337 | 109 | 332 | 4.14e-13 | 70.9 |
Find 136 sgRNAs with CRISPR-Local
Find 506 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATTATTGAGTCTAATTTA+AGG | 0.180311 | 3_1:+12195838 | Msa0348990:three_prime_UTR |
TTAGGTGAAGAGATTGTTTA+TGG | 0.198161 | 3_1:+12190116 | Msa0348990:intron |
AAAGACTTTCATTTGCTTAC+AGG | 0.206039 | 3_1:+12194582 | Msa0348990:CDS |
ATTGTTTATGGTGCAGTTTC+TGG | 0.219909 | 3_1:+12190128 | Msa0348990:CDS |
CTCTAGCTGCCTATGATAAT+TGG | 0.252472 | 3_1:-12190439 | None:intergenic |
GGTAGATGATGATGCGTTTC+AGG | 0.254633 | 3_1:+12189001 | Msa0348990:CDS |
CGTCTTGCTGAGCGGCAAAA+AGG | 0.257869 | 3_1:+12191513 | Msa0348990:CDS |
TTCCAAGATACACGAATTTA+CGG | 0.288778 | 3_1:+12195723 | Msa0348990:CDS |
AAAAGAAGAGAAGAAGGTTT+TGG | 0.302002 | 3_1:-12188829 | None:intergenic |
TTTCCAAATCTTCCCTTGTA+TGG | 0.320552 | 3_1:-12195668 | None:intergenic |
TGTCACTATGGAATAAAATA+AGG | 0.335552 | 3_1:-12195887 | None:intergenic |
TACAGGATTTGCTGCCAATA+TGG | 0.344081 | 3_1:+12191368 | Msa0348990:CDS |
GATATGATGGGACTTGTAAC+AGG | 0.356056 | 3_1:-12194609 | None:intergenic |
CTGGCAATGGTGTACTGTTC+CGG | 0.359410 | 3_1:-12195816 | None:intergenic |
ATGGAGGATTTATAGCTTGC+AGG | 0.364817 | 3_1:+12192968 | Msa0348990:CDS |
GACAAAATAGCTTGTCACTA+TGG | 0.365353 | 3_1:-12195899 | None:intergenic |
GGTTTGTTGGTTGGTTGGTT+TGG | 0.375126 | 3_1:-12188808 | None:intergenic |
GCAGCAGCAGCAACTGGAAC+CGG | 0.383798 | 3_1:-12193203 | None:intergenic |
CCAGTTGCTGCTGCTGCTCA+TGG | 0.386729 | 3_1:+12193209 | Msa0348990:CDS |
AGGGGTTCTGCTCTTATTTG+TGG | 0.388904 | 3_1:+12190411 | Msa0348990:CDS |
TCCCACCATGCAGTTGGTAT+TGG | 0.391062 | 3_1:-12188897 | None:intergenic |
GTCTTCAGTGCCAACGATAA+GGG | 0.391432 | 3_1:-12194631 | None:intergenic |
TTATAGCTCTCCATTCTATC+AGG | 0.394212 | 3_1:+12195765 | Msa0348990:exon |
GTGAAACCACGTTTAGGAAA+TGG | 0.396653 | 3_1:+12189075 | Msa0348990:CDS |
CTGAGTTCCCATCCGACTAT+TGG | 0.396677 | 3_1:+12190224 | Msa0348990:CDS |
AAATTCGTGAAACCACGTTT+AGG | 0.399614 | 3_1:+12189069 | Msa0348990:CDS |
AGTATTGGTTCTCTCTTAGC+TGG | 0.404148 | 3_1:+12191411 | Msa0348990:CDS |
TGCTGTCATCAAGGCCATAT+TGG | 0.404382 | 3_1:-12191382 | None:intergenic |
ATGACAGCAATTGGAAGTAT+TGG | 0.404847 | 3_1:+12191396 | Msa0348990:CDS |
GTGGATATACCAATTATCAT+AGG | 0.411155 | 3_1:+12190430 | Msa0348990:CDS |
GATTGCCTTCTTTGTCCTAC+AGG | 0.411725 | 3_1:+12191351 | Msa0348990:CDS |
AGTCCATACAAGGGAAGATT+TGG | 0.414221 | 3_1:+12195665 | Msa0348990:CDS |
GCTACTAACCTGCAGGAGTT+AGG | 0.415259 | 3_1:-12194866 | None:intergenic |
TGCAGCTTGTTTAGCATGGA+TGG | 0.419362 | 3_1:+12192441 | Msa0348990:intron |
TACCTCACGTTGGAGACAAA+TGG | 0.419730 | 3_1:-12188982 | None:intergenic |
AAAGATAATTTACCGGAACT+TGG | 0.420440 | 3_1:-12189110 | None:intergenic |
AGCCGTAAATTCGTGTATCT+TGG | 0.428138 | 3_1:-12195725 | None:intergenic |
TGTCTTCAGTGCCAACGATA+AGG | 0.430524 | 3_1:-12194632 | None:intergenic |
CATGGCGTAGAAAGGCCATT+TGG | 0.432019 | 3_1:+12194550 | Msa0348990:CDS |
TAGGCAGCTAGAGTCGAGTT+TGG | 0.436591 | 3_1:+12190449 | Msa0348990:CDS |
CATGCAGTTGGTATTGGTAT+TGG | 0.442156 | 3_1:-12188891 | None:intergenic |
ATGGCCTTGATGACAGCAAT+TGG | 0.443915 | 3_1:+12191387 | Msa0348990:CDS |
GTAGAAAGGCCATTTGGAAC+CGG | 0.446898 | 3_1:+12194556 | Msa0348990:CDS |
CCATGAGCAGCAGCAGCAAC+TGG | 0.447831 | 3_1:-12193209 | None:intergenic |
AAGATAATTTACCGGAACTT+GGG | 0.449828 | 3_1:-12189109 | None:intergenic |
TGGCAATGGTGTACTGTTCC+GGG | 0.453061 | 3_1:-12195815 | None:intergenic |
CCCTCAGTGCAGTCCATACA+AGG | 0.466293 | 3_1:+12195655 | Msa0348990:CDS |
GCCAACGATAAGGGATATGA+TGG | 0.470013 | 3_1:-12194622 | None:intergenic |
ATGCATGATACCCCAAGTTC+CGG | 0.470094 | 3_1:+12189098 | Msa0348990:CDS |
TGCAATTCATCCTGATAGAA+TGG | 0.471003 | 3_1:-12195775 | None:intergenic |
AACAGGCATTTATTACAAGC+TGG | 0.479117 | 3_1:+12194806 | Msa0348990:intron |
GTCTTTCACCCGGTTCCAAA+TGG | 0.482290 | 3_1:-12194565 | None:intergenic |
ACCTCACGTTGGAGACAAAT+GGG | 0.490170 | 3_1:-12188981 | None:intergenic |
GGATGGGGACTTTGCACCAA+TGG | 0.499074 | 3_1:+12192458 | Msa0348990:CDS |
ATGGGATCGTTCTTCTGTTG+AGG | 0.500572 | 3_1:+12189043 | Msa0348990:CDS |
GCTCATGGGACATTTGTTTG+TGG | 0.500720 | 3_1:+12192856 | Msa0348990:CDS |
CTGTGCCTCCTAACTCCTGC+AGG | 0.500969 | 3_1:+12194858 | Msa0348990:CDS |
TAAATTAGACTCAATAATGC+TGG | 0.509439 | 3_1:-12195835 | None:intergenic |
AGTAAAGCTGCCGGCTGCCA+TGG | 0.511804 | 3_1:+12192949 | Msa0348990:CDS |
GCAGCTTGTTTAGCATGGAT+GGG | 0.512276 | 3_1:+12192442 | Msa0348990:intron |
ACCAATACCAACTGCATGGT+GGG | 0.512747 | 3_1:+12188896 | Msa0348990:CDS |
AATCACGCGTCAATAATTGA+TGG | 0.513514 | 3_1:+12191486 | Msa0348990:CDS |
ACATGAGACATGGCGTAGAA+AGG | 0.514262 | 3_1:+12194542 | Msa0348990:CDS |
CCTTGTATGGACTGCACTGA+GGG | 0.516556 | 3_1:-12195655 | None:intergenic |
AATGTGCGTTTCCAGGCTCA+TGG | 0.523142 | 3_1:+12192841 | Msa0348990:intron |
CAGCTTGTTTAGCATGGATG+GGG | 0.523345 | 3_1:+12192443 | Msa0348990:intron |
GCAGCAGCCTTTCCAATAGT+CGG | 0.526222 | 3_1:-12190236 | None:intergenic |
CAATAGTCGGATGGGAACTC+AGG | 0.528500 | 3_1:-12190223 | None:intergenic |
ACAAACAAAAGAAGAGAAGA+AGG | 0.534068 | 3_1:-12188835 | None:intergenic |
TATTAGGCAGCTCAAGAACA+TGG | 0.535300 | 3_1:+12190378 | Msa0348990:intron |
ACTTCCAATTGCTGTCATCA+AGG | 0.535625 | 3_1:-12191391 | None:intergenic |
AAGAACATGGGATGGGACCA+AGG | 0.538361 | 3_1:+12190391 | Msa0348990:CDS |
TATTGGAAAGGCTGCTGCAA+AGG | 0.541245 | 3_1:+12190241 | Msa0348990:CDS |
TATAAATCCTCCATGGCAGC+CGG | 0.545155 | 3_1:-12192959 | None:intergenic |
GTTTCTGGTGATGATGAAGC+AGG | 0.549109 | 3_1:+12190143 | Msa0348990:CDS |
GCAGAACTCCGCAAGAAGCA+TGG | 0.550468 | 3_1:+12192489 | Msa0348990:CDS |
TTATTGCAGCTTGTTTAGCA+TGG | 0.551970 | 3_1:+12192437 | Msa0348990:intron |
GAGTTAGGAGGCACAGTTGG+TGG | 0.555017 | 3_1:-12194851 | None:intergenic |
AGAACATGGGATGGGACCAA+GGG | 0.555717 | 3_1:+12190392 | Msa0348990:CDS |
GTTCAATTGTGAGAAGGATG+TGG | 0.559563 | 3_1:+12192906 | Msa0348990:CDS |
GTATTGGTTCTCTCTTAGCT+GGG | 0.560380 | 3_1:+12191412 | Msa0348990:CDS |
ACACGAATTTACGGCTGCAA+TGG | 0.562509 | 3_1:+12195732 | Msa0348990:CDS |
CAAATCCTGTAGGACAAAGA+AGG | 0.562711 | 3_1:-12191356 | None:intergenic |
GGCAGCTCAAGAACATGGGA+TGG | 0.564408 | 3_1:+12190383 | Msa0348990:intron |
ATCAATGTGATTAACTATCC+CGG | 0.564848 | 3_1:+12195797 | Msa0348990:three_prime_UTR |
TAGAAAGGCCATTTGGAACC+GGG | 0.565145 | 3_1:+12194557 | Msa0348990:CDS |
ACAGTAACTTCTTTCAACAA+TGG | 0.565711 | 3_1:+12188863 | Msa0348990:exon |
TAAGGACATTGCATTTGTAG+TGG | 0.566631 | 3_1:+12195856 | Msa0348990:three_prime_UTR |
AGATAATTTACCGGAACTTG+GGG | 0.566826 | 3_1:-12189108 | None:intergenic |
AGACTCAATAATGCTGGCAA+TGG | 0.570145 | 3_1:-12195829 | None:intergenic |
CAGCCTTTCCAATAGTCGGA+TGG | 0.571423 | 3_1:-12190232 | None:intergenic |
TCACAATGTCTATATATGTA+CGG | 0.573210 | 3_1:-12191543 | None:intergenic |
GTTTGATGAAATGCAGCAAT+GGG | 0.577345 | 3_1:+12189025 | Msa0348990:CDS |
CAAATAAGAGCAGAACCCCT+TGG | 0.578144 | 3_1:-12190408 | None:intergenic |
ATGTGCGTTTCCAGGCTCAT+GGG | 0.580951 | 3_1:+12192842 | Msa0348990:intron |
AGCCTTTCCAATAGTCGGAT+GGG | 0.582726 | 3_1:-12190231 | None:intergenic |
ACAAAGCACTGCAAGCAAGC+CGG | 0.591467 | 3_1:+12194652 | Msa0348990:CDS |
AGTTCTGCAAGCTCAACCAT+TGG | 0.591758 | 3_1:-12192474 | None:intergenic |
GTAACTTCTTTCAACAATGG+AGG | 0.592686 | 3_1:+12188866 | Msa0348990:exon |
CCCATCATATCCCTTATCGT+TGG | 0.593478 | 3_1:+12194621 | Msa0348990:CDS |
CTCACAAGAGTGTATTGAGG+TGG | 0.601182 | 3_1:-12191572 | None:intergenic |
CAGGAGTTAGGAGGCACAGT+TGG | 0.603297 | 3_1:-12194854 | None:intergenic |
AAGGATGTGGATATTTGCAT+TGG | 0.603517 | 3_1:+12192919 | Msa0348990:CDS |
AAGTACTCTGAGAGAGTCAA+GGG | 0.607942 | 3_1:-12188946 | None:intergenic |
ATGCATCCATTTCCTAAACG+TGG | 0.609430 | 3_1:-12189081 | None:intergenic |
TTCCCATCCGACTATTGGAA+AGG | 0.612334 | 3_1:+12190229 | Msa0348990:CDS |
GTGGTCTGATTGCAGTCACA+TGG | 0.612568 | 3_1:-12194832 | None:intergenic |
CCCTTGTATGGACTGCACTG+AGG | 0.613045 | 3_1:-12195656 | None:intergenic |
TGCAAGCTATAAATCCTCCA+TGG | 0.620898 | 3_1:-12192966 | None:intergenic |
GAAGTACTCTGAGAGAGTCA+AGG | 0.624285 | 3_1:-12188947 | None:intergenic |
AAAGCTGCCGGCTGCCATGG+AGG | 0.624806 | 3_1:+12192952 | Msa0348990:CDS |
TGTTTGATGAAATGCAGCAA+TGG | 0.626751 | 3_1:+12189024 | Msa0348990:CDS |
GCAGCTCAAGAACATGGGAT+GGG | 0.629189 | 3_1:+12190384 | Msa0348990:CDS |
ATTAGGCAGCTCAAGAACAT+GGG | 0.637158 | 3_1:+12190379 | Msa0348990:intron |
ACTAACCTGCAGGAGTTAGG+AGG | 0.641127 | 3_1:-12194863 | None:intergenic |
CAATACCAATACCAACTGCA+TGG | 0.642513 | 3_1:+12188892 | Msa0348990:CDS |
TCACAAGAGTGTATTGAGGT+GGG | 0.645382 | 3_1:-12191571 | None:intergenic |
GCAAATGAAAGTCTTTCACC+CGG | 0.646068 | 3_1:-12194575 | None:intergenic |
ATTGATGCAATTCGAGAGTG+CGG | 0.646071 | 3_1:-12195700 | None:intergenic |
AAATGGTGGTGGTGTTGCTG+AGG | 0.647397 | 3_1:+12192882 | Msa0348990:CDS |
TACCAATACCAACTGCATGG+TGG | 0.647719 | 3_1:+12188895 | Msa0348990:CDS |
GGTACACTAAGTAAAGCTGC+CGG | 0.648395 | 3_1:+12192940 | Msa0348990:CDS |
GAACATGGGATGGGACCAAG+GGG | 0.650419 | 3_1:+12190393 | Msa0348990:CDS |
GAGTGGCAAAACATGAGACA+TGG | 0.650779 | 3_1:+12194532 | Msa0348990:CDS |
ACCCATTTGTCTCCAACGTG+AGG | 0.654644 | 3_1:+12188980 | Msa0348990:CDS |
TTTCTGGTGATGATGAAGCA+GGG | 0.655163 | 3_1:+12190144 | Msa0348990:CDS |
TGAGGAGTTCAATTGTGAGA+AGG | 0.658460 | 3_1:+12192900 | Msa0348990:CDS |
ATATTGGCAGCAAATCCTGT+AGG | 0.658659 | 3_1:-12191366 | None:intergenic |
ATATGATGGGACTTGTAACA+GGG | 0.666917 | 3_1:-12194608 | None:intergenic |
ATGGTATTCGTCTTGCTGAG+CGG | 0.672498 | 3_1:+12191505 | Msa0348990:CDS |
CCAACGATAAGGGATATGAT+GGG | 0.676737 | 3_1:-12194621 | None:intergenic |
AAACTCACAAGAGTGTATTG+AGG | 0.681743 | 3_1:-12191575 | None:intergenic |
CATCATCATCTACCTCACGT+TGG | 0.687422 | 3_1:-12188992 | None:intergenic |
AAGTTATTAATACAGTCAAG+AGG | 0.690909 | 3_1:+12193152 | Msa0348990:CDS |
CCTCAGTGCAGTCCATACAA+GGG | 0.703411 | 3_1:+12195656 | Msa0348990:CDS |
TGAATTCTTATAGCACATCG+TGG | 0.706133 | 3_1:+12193129 | Msa0348990:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATTGAAAATTGAAAA+TGG | - | chr3_1:12191111-12191130 | None:intergenic | 10.0% |
!!! | TTTTCAATTATTTATATTTC+TGG | + | chr3_1:12191118-12191137 | Msa0348990:intron | 10.0% |
!! | TTTCAATTATTTATATTTCT+GGG | + | chr3_1:12191119-12191138 | Msa0348990:intron | 10.0% |
!! | ACTATTAAGATTAATAAAAT+AGG | - | chr3_1:12191996-12192015 | None:intergenic | 10.0% |
!!! | ACTAATTCTTTTTTTTTTTT+AGG | - | chr3_1:12194348-12194367 | None:intergenic | 10.0% |
!!! | TTATTTTCTCAATCTATTAT+AGG | - | chr3_1:12189235-12189254 | None:intergenic | 15.0% |
!! | ACGAAATTCAAAATAATTAT+AGG | - | chr3_1:12189474-12189493 | None:intergenic | 15.0% |
!!! | TTCAACCATATTTTTATAAT+AGG | - | chr3_1:12189675-12189694 | None:intergenic | 15.0% |
!!! | AGAAAATTAATTTTGTTTTC+TGG | + | chr3_1:12190185-12190204 | Msa0348990:CDS | 15.0% |
!! | AGATTAATAATACATTACTT+AGG | - | chr3_1:12190559-12190578 | None:intergenic | 15.0% |
!! | AAAGTATAAAATAATCCTAA+TGG | + | chr3_1:12191179-12191198 | Msa0348990:intron | 15.0% |
!! | ATGAATAATATGCAAATTTA+AGG | - | chr3_1:12191608-12191627 | None:intergenic | 15.0% |
!!! | AAAAGTATGTAAAAAATTAG+TGG | + | chr3_1:12191875-12191894 | Msa0348990:intron | 15.0% |
!!! | TTACTTTCTAGAAATATAAA+TGG | - | chr3_1:12192684-12192703 | None:intergenic | 15.0% |
!! | CATAGAATAGAAAAATTTAT+TGG | - | chr3_1:12193111-12193130 | None:intergenic | 15.0% |
!! | TTGATATATCTTAAATATTG+AGG | + | chr3_1:12193255-12193274 | Msa0348990:intron | 15.0% |
!! | AAGAAAAAATATTGAGAAAT+AGG | - | chr3_1:12193313-12193332 | None:intergenic | 15.0% |
!!! | TATGAATTTTTAAATTTGGT+AGG | - | chr3_1:12193440-12193459 | None:intergenic | 15.0% |
!! | ATGGAAAAATATATAATCAA+AGG | - | chr3_1:12195585-12195604 | None:intergenic | 15.0% |
!! | GCATACCTATTATAAAAATA+TGG | + | chr3_1:12189667-12189686 | Msa0348990:intron | 20.0% |
!!! | AATCTAAACTTTGGTAATTT+GGG | + | chr3_1:12189693-12189712 | Msa0348990:intron | 20.0% |
!! | TGTAATTAAGATAGATTTAG+AGG | + | chr3_1:12189809-12189828 | Msa0348990:intron | 20.0% |
!! | ATCGTTAAATAAAGAAGATT+TGG | + | chr3_1:12189945-12189964 | Msa0348990:intron | 20.0% |
!!! | TATTCTTGTTATTTGCATAA+AGG | + | chr3_1:12189989-12190008 | Msa0348990:intron | 20.0% |
!!! | ATTCTTGTTATTTGCATAAA+GGG | + | chr3_1:12189990-12190009 | Msa0348990:intron | 20.0% |
!!! | TTTTCTGGAAATGATTATTT+AGG | + | chr3_1:12190200-12190219 | Msa0348990:CDS | 20.0% |
!!! | TTCTTCTGAATTTTATTCTA+CGG | + | chr3_1:12190297-12190316 | Msa0348990:intron | 20.0% |
!!! | TATTTTCATTGTTCCATATT+AGG | + | chr3_1:12190362-12190381 | Msa0348990:intron | 20.0% |
!! | ATTATTTGTGCAGTATATAT+GGG | + | chr3_1:12190706-12190725 | Msa0348990:intron | 20.0% |
!!! | AATTGACTTCATTTTATCTT+TGG | - | chr3_1:12190877-12190896 | None:intergenic | 20.0% |
!!! | GTTGTTTTCATAAGTTATAA+TGG | + | chr3_1:12190910-12190929 | Msa0348990:intron | 20.0% |
!!! | AAGTTATAATGGAGATTTTA+TGG | + | chr3_1:12190921-12190940 | Msa0348990:intron | 20.0% |
!! | ATTGAATTTACATATATCAG+TGG | + | chr3_1:12191155-12191174 | Msa0348990:intron | 20.0% |
!!! | TTTTGAATTTAAAGAACTTG+CGG | + | chr3_1:12191213-12191232 | Msa0348990:intron | 20.0% |
!! | AACAAATATAGGAGATATTT+AGG | - | chr3_1:12191824-12191843 | None:intergenic | 20.0% |
!! | GATTATCTAAGAACAAATAT+AGG | - | chr3_1:12191835-12191854 | None:intergenic | 20.0% |
!! | GTATATAAAAAGCTTTCAAA+CGG | + | chr3_1:12192191-12192210 | Msa0348990:intron | 20.0% |
!!! | TTCTAGAAATATAAATGGTA+CGG | - | chr3_1:12192679-12192698 | None:intergenic | 20.0% |
!!! | TTTTTTGAAAGTAAGAATGA+AGG | + | chr3_1:12193555-12193574 | Msa0348990:intron | 20.0% |
!! | GAAGATATTCAATAATCAAT+GGG | + | chr3_1:12193734-12193753 | Msa0348990:intron | 20.0% |
!!! | GATTGGAAAAATACTTTTTT+TGG | + | chr3_1:12193823-12193842 | Msa0348990:intron | 20.0% |
!! | TAATATAAGGATATAACGAT+CGG | - | chr3_1:12194124-12194143 | None:intergenic | 20.0% |
!!! | TATCTTTTAGAATGAAATTC+AGG | - | chr3_1:12194901-12194920 | None:intergenic | 20.0% |
!! | TCAAGTTCAACTTAAAATTA+TGG | - | chr3_1:12195111-12195130 | None:intergenic | 20.0% |
!!! | ATGTTGTTAGTGATTTTTTT+TGG | + | chr3_1:12195219-12195238 | Msa0348990:intron | 20.0% |
!!! | GTTTTCTCTAATTTTGTAAA+CGG | + | chr3_1:12195255-12195274 | Msa0348990:intron | 20.0% |
! | TAGTGCAAAAGATAATTTAC+CGG | - | chr3_1:12189120-12189139 | None:intergenic | 25.0% |
! | GTAATTATAAGCTATAAGAC+AGG | + | chr3_1:12189497-12189516 | Msa0348990:intron | 25.0% |
! | ATATGGTTGAATCTAAACTT+TGG | + | chr3_1:12189684-12189703 | Msa0348990:intron | 25.0% |
!! | GAATCTAAACTTTGGTAATT+TGG | + | chr3_1:12189692-12189711 | Msa0348990:intron | 25.0% |
! | TTTGTGTTCTGTTATGATTT+CGG | + | chr3_1:12190048-12190067 | Msa0348990:intron | 25.0% |
!! | TCTTCTGAATTTTATTCTAC+GGG | + | chr3_1:12190298-12190317 | Msa0348990:intron | 25.0% |
! | ATTTGAAAAAGAAAGAGGTA+AGG | + | chr3_1:12190475-12190494 | Msa0348990:intron | 25.0% |
!! | AAGAATCACTATACAGTTTT+TGG | + | chr3_1:12190587-12190606 | Msa0348990:intron | 25.0% |
!! | AGAATCACTATACAGTTTTT+GGG | + | chr3_1:12190588-12190607 | Msa0348990:intron | 25.0% |
! | GATTATTTGTGCAGTATATA+TGG | + | chr3_1:12190705-12190724 | Msa0348990:intron | 25.0% |
! | TTATTTGTGCAGTATATATG+GGG | + | chr3_1:12190707-12190726 | Msa0348990:intron | 25.0% |
!!! | TCAAGGTGATATATGTTTTT+TGG | + | chr3_1:12190741-12190760 | Msa0348990:intron | 25.0% |
!!! | ATATATGTTTTTTGGTTACC+TGG | + | chr3_1:12190749-12190768 | Msa0348990:intron | 25.0% |
!!! | TATATGTTTTTTGGTTACCT+GGG | + | chr3_1:12190750-12190769 | Msa0348990:intron | 25.0% |
! | TCACACATATCAAGTATTAA+GGG | - | chr3_1:12191062-12191081 | None:intergenic | 25.0% |
! | TTCACACATATCAAGTATTA+AGG | - | chr3_1:12191063-12191082 | None:intergenic | 25.0% |
! | GCAAGTTCTTTAAATTCAAA+AGG | - | chr3_1:12191214-12191233 | None:intergenic | 25.0% |
! | TTTGAATTTAAAGAACTTGC+GGG | + | chr3_1:12191214-12191233 | Msa0348990:intron | 25.0% |
! | TAATTCACTATTCATTAGGT+GGG | - | chr3_1:12191256-12191275 | None:intergenic | 25.0% |
! | TTAATTCACTATTCATTAGG+TGG | - | chr3_1:12191257-12191276 | None:intergenic | 25.0% |
! | CCTTTAATTCACTATTCATT+AGG | - | chr3_1:12191260-12191279 | None:intergenic | 25.0% |
! | CCTAATGAATAGTGAATTAA+AGG | + | chr3_1:12191257-12191276 | Msa0348990:intron | 25.0% |
! | ATGAATAGTGAATTAAAGGA+TGG | + | chr3_1:12191261-12191280 | Msa0348990:intron | 25.0% |
! | TGAATAGTGAATTAAAGGAT+GGG | + | chr3_1:12191262-12191281 | Msa0348990:intron | 25.0% |
!! | ATGGATTTTAAACCAAAAAC+AGG | - | chr3_1:12191324-12191343 | None:intergenic | 25.0% |
! | TCACAATGTCTATATATGTA+CGG | - | chr3_1:12191546-12191565 | None:intergenic | 25.0% |
! | ATTTGTTCTTAGATAATCTC+TGG | + | chr3_1:12191837-12191856 | Msa0348990:intron | 25.0% |
! | TTTGTTCTTAGATAATCTCT+GGG | + | chr3_1:12191838-12191857 | Msa0348990:intron | 25.0% |
!! | AATTTTATTGAAGATCACAG+AGG | - | chr3_1:12192239-12192258 | None:intergenic | 25.0% |
! | TTCATTCATGTGATGTATAA+TGG | - | chr3_1:12192304-12192323 | None:intergenic | 25.0% |
!!! | AGAAGATATTTTTACAGTGA+TGG | + | chr3_1:12192390-12192409 | Msa0348990:intron | 25.0% |
!! | ATGATGTGTTGTTATGTATA+TGG | + | chr3_1:12192587-12192606 | Msa0348990:intron | 25.0% |
!!! | TATTATTTTAAGCCCTTCTT+AGG | - | chr3_1:12192639-12192658 | None:intergenic | 25.0% |
! | AAGACAATAAATAGTAGAGT+GGG | - | chr3_1:12192727-12192746 | None:intergenic | 25.0% |
! | TATCAGATAAATAGTTACTC+AGG | - | chr3_1:12192750-12192769 | None:intergenic | 25.0% |
!!! | TGGTTTTGAAATTAACGTTA+AGG | + | chr3_1:12193010-12193029 | Msa0348990:intron | 25.0% |
! | AAGTTATTAATACAGTCAAG+AGG | + | chr3_1:12193152-12193171 | Msa0348990:CDS | 25.0% |
!!! | ATGGTAAATGTTTTGCTTTT+TGG | - | chr3_1:12193285-12193304 | None:intergenic | 25.0% |
! | TATTGAGAAATAGGAACAAA+TGG | - | chr3_1:12193304-12193323 | None:intergenic | 25.0% |
! | TATGAATATGGAAATTGCAT+TGG | + | chr3_1:12193647-12193666 | Msa0348990:intron | 25.0% |
! | ATTTCCCTAATTATTGATAG+TGG | + | chr3_1:12193702-12193721 | Msa0348990:intron | 25.0% |
! | GGAAGATATTCAATAATCAA+TGG | + | chr3_1:12193733-12193752 | Msa0348990:intron | 25.0% |
!! | TAATCAATGGGTTTAATGAT+AGG | + | chr3_1:12193746-12193765 | Msa0348990:intron | 25.0% |
!!! | AAATACTTTTTTTGGCTAAC+CGG | + | chr3_1:12193831-12193850 | Msa0348990:intron | 25.0% |
!! | TGTTTCGTTTTCCAAAAATA+CGG | - | chr3_1:12193880-12193899 | None:intergenic | 25.0% |
! | CATGTTACACAGATAATATA+AGG | - | chr3_1:12194137-12194156 | None:intergenic | 25.0% |
! | TGATGGTTCAAATATTTGTT+CGG | + | chr3_1:12194406-12194425 | Msa0348990:intron | 25.0% |
! | ACGATTGTAAAAAGAAATGA+TGG | - | chr3_1:12194446-12194465 | None:intergenic | 25.0% |
! | GTAATACTTAGATCTTCATT+GGG | - | chr3_1:12194719-12194738 | None:intergenic | 25.0% |
! | TGTAATACTTAGATCTTCAT+TGG | - | chr3_1:12194720-12194739 | None:intergenic | 25.0% |
! | ATTTGATGTATTTCTTGAAC+AGG | + | chr3_1:12194789-12194808 | Msa0348990:intron | 25.0% |
! | AGATAAATAGAACTTATCAG+AGG | + | chr3_1:12194916-12194935 | Msa0348990:intron | 25.0% |
! | GGATTCAAGTAATGAAATAT+TGG | - | chr3_1:12195090-12195109 | None:intergenic | 25.0% |
! | TAGAAAAACTAGCAAATTTC+TGG | - | chr3_1:12195383-12195402 | None:intergenic | 25.0% |
!! | TGCATTGTGAACTATAATTT+TGG | + | chr3_1:12195535-12195554 | Msa0348990:intron | 25.0% |
!! | GCATTGTGAACTATAATTTT+GGG | + | chr3_1:12195536-12195555 | Msa0348990:intron | 25.0% |
!!! | TGAACTATAATTTTGGGTTA+TGG | + | chr3_1:12195542-12195561 | Msa0348990:intron | 25.0% |
! | TAAATTAGACTCAATAATGC+TGG | - | chr3_1:12195838-12195857 | None:intergenic | 25.0% |
! | GCATTATTGAGTCTAATTTA+AGG | + | chr3_1:12195838-12195857 | Msa0348990:three_prime_UTR | 25.0% |
! | TGTCACTATGGAATAAAATA+AGG | - | chr3_1:12195890-12195909 | None:intergenic | 25.0% |
! | AAAAGAAGAGAAGAAGGTTT+TGG | - | chr3_1:12188832-12188851 | None:intergenic | 30.0% |
ACAAACAAAAGAAGAGAAGA+AGG | - | chr3_1:12188838-12188857 | None:intergenic | 30.0% | |
ACAGTAACTTCTTTCAACAA+TGG | + | chr3_1:12188863-12188882 | Msa0348990:exon | 30.0% | |
AAGATAATTTACCGGAACTT+GGG | - | chr3_1:12189112-12189131 | None:intergenic | 30.0% | |
AAAGATAATTTACCGGAACT+TGG | - | chr3_1:12189113-12189132 | None:intergenic | 30.0% | |
CATAAATCATAACAGAACAC+AGG | - | chr3_1:12189835-12189854 | None:intergenic | 30.0% | |
TGCAAATAACAAGAATAGAG+CGG | - | chr3_1:12189986-12190005 | None:intergenic | 30.0% | |
TTGTGTTCTGTTATGATTTC+GGG | + | chr3_1:12190049-12190068 | Msa0348990:intron | 30.0% | |
CAAGAAAAAGAGGGAAAAAA+AGG | - | chr3_1:12190088-12190107 | None:intergenic | 30.0% | |
!!! | TTTTTTCCCTCTTTTTCTTG+TGG | + | chr3_1:12190088-12190107 | Msa0348990:intron | 30.0% |
TTAGGTGAAGAGATTGTTTA+TGG | + | chr3_1:12190116-12190135 | Msa0348990:intron | 30.0% | |
GTGGATATACCAATTATCAT+AGG | + | chr3_1:12190430-12190449 | Msa0348990:CDS | 30.0% | |
AACAAAACCAGAACAGTTTA+AGG | - | chr3_1:12190518-12190537 | None:intergenic | 30.0% | |
!!! | AACTGTTCTGGTTTTGTTAT+TGG | + | chr3_1:12190520-12190539 | Msa0348990:intron | 30.0% |
AATGTTCAAACTAGGACATA+AGG | - | chr3_1:12190672-12190691 | None:intergenic | 30.0% | |
TATTTGTGCAGTATATATGG+GGG | + | chr3_1:12190708-12190727 | Msa0348990:intron | 30.0% | |
!!! | ATATGTTTTTTGGTTACCTG+GGG | + | chr3_1:12190751-12190770 | Msa0348990:intron | 30.0% |
CTTAAAACAACTTATGCTCA+TGG | + | chr3_1:12190951-12190970 | Msa0348990:intron | 30.0% | |
ACTTATTTGAGCTTATCAAC+TGG | - | chr3_1:12191026-12191045 | None:intergenic | 30.0% | |
! | TCAAGTATTAAGGGTTTGTT+TGG | - | chr3_1:12191053-12191072 | None:intergenic | 30.0% |
! | TGGTTTAAAATCCATGCTAT+AGG | + | chr3_1:12191329-12191348 | Msa0348990:intron | 30.0% |
TAGTATAGACTGTACCAAAA+GGG | - | chr3_1:12191640-12191659 | None:intergenic | 30.0% | |
TTAGTATAGACTGTACCAAA+AGG | - | chr3_1:12191641-12191660 | None:intergenic | 30.0% | |
! | AGAACTGGAAAATTTGTTCA+AGG | + | chr3_1:12191754-12191773 | Msa0348990:intron | 30.0% |
! | TGGAAAATTTGTTCAAGGTT+TGG | + | chr3_1:12191759-12191778 | Msa0348990:intron | 30.0% |
TTGTTCTTAGATAATCTCTG+GGG | + | chr3_1:12191839-12191858 | Msa0348990:intron | 30.0% | |
AATAGTCAAATCTATGCTAG+TGG | + | chr3_1:12192010-12192029 | Msa0348990:intron | 30.0% | |
TGAATTTCTCGATGTAAATG+TGG | + | chr3_1:12192079-12192098 | Msa0348990:intron | 30.0% | |
TGCAAGTACATTATATAGGA+TGG | - | chr3_1:12192125-12192144 | None:intergenic | 30.0% | |
ACTTTGCAACAAATGCAATA+AGG | + | chr3_1:12192338-12192357 | Msa0348990:intron | 30.0% | |
CTTTGCAACAAATGCAATAA+GGG | + | chr3_1:12192339-12192358 | Msa0348990:intron | 30.0% | |
AACAAATGCAATAAGGGAAA+AGG | + | chr3_1:12192345-12192364 | Msa0348990:intron | 30.0% | |
GAACAAAACAAACCAATAAG+AGG | - | chr3_1:12192543-12192562 | None:intergenic | 30.0% | |
GAAGACAATAAATAGTAGAG+TGG | - | chr3_1:12192728-12192747 | None:intergenic | 30.0% | |
AGCAAAATATGTCTTCTCTT+TGG | + | chr3_1:12192772-12192791 | Msa0348990:intron | 30.0% | |
AAATAAAAATGTGCGTTTCC+AGG | + | chr3_1:12192834-12192853 | Msa0348990:intron | 30.0% | |
ACATTTGTTTGTGGCAAAAA+TGG | + | chr3_1:12192865-12192884 | Msa0348990:CDS | 30.0% | |
GGTAGAAGACTGATTAAATA+AGG | + | chr3_1:12193600-12193619 | Msa0348990:intron | 30.0% | |
TTAAATAAGGAACGTAAGAG+AGG | + | chr3_1:12193613-12193632 | Msa0348990:intron | 30.0% | |
! | ATATGGAAATTGCATTGGTA+AGG | + | chr3_1:12193652-12193671 | Msa0348990:intron | 30.0% |
TCCATGATTTATGGGTTTAT+TGG | + | chr3_1:12193676-12193695 | Msa0348990:intron | 30.0% | |
TCCAATAAACCCATAAATCA+TGG | - | chr3_1:12193680-12193699 | None:intergenic | 30.0% | |
ACAGCCACTATCAATAATTA+GGG | - | chr3_1:12193709-12193728 | None:intergenic | 30.0% | |
TACAGCCACTATCAATAATT+AGG | - | chr3_1:12193710-12193729 | None:intergenic | 30.0% | |
!! | ATTATTGATAGTGGCTGTAT+TGG | + | chr3_1:12193711-12193730 | Msa0348990:intron | 30.0% |
!! | TTATTGATAGTGGCTGTATT+GGG | + | chr3_1:12193712-12193731 | Msa0348990:intron | 30.0% |
!!! | AATACTTTTTTTGGCTAACC+GGG | + | chr3_1:12193832-12193851 | Msa0348990:intron | 30.0% |
! | GTTTCGTTTTCCAAAAATAC+GGG | - | chr3_1:12193879-12193898 | None:intergenic | 30.0% |
AGCATGATCTTATAGATTAG+TGG | + | chr3_1:12194189-12194208 | Msa0348990:intron | 30.0% | |
GATGCAAAGAAAGAAATGTT+TGG | + | chr3_1:12194379-12194398 | Msa0348990:intron | 30.0% | |
AAGAAATGTTTGGTATGTGA+TGG | + | chr3_1:12194389-12194408 | Msa0348990:intron | 30.0% | |
AAATATGTCATTCTCACAAG+AGG | - | chr3_1:12194477-12194496 | None:intergenic | 30.0% | |
AAAGACTTTCATTTGCTTAC+AGG | + | chr3_1:12194582-12194601 | Msa0348990:CDS | 30.0% | |
!! | ACTTATCAGAGGTGTTTAAA+TGG | + | chr3_1:12194927-12194946 | Msa0348990:intron | 30.0% |
!! | CTTATCAGAGGTGTTTAAAT+GGG | + | chr3_1:12194928-12194947 | Msa0348990:intron | 30.0% |
! | CTCTAATTTTGTAAACGGTT+AGG | + | chr3_1:12195260-12195279 | Msa0348990:intron | 30.0% |
ATTATGACCCACAATAAGTT+TGG | + | chr3_1:12195456-12195475 | Msa0348990:intron | 30.0% | |
GAAAGAAAGGTAAAAGATGT+AGG | - | chr3_1:12195609-12195628 | None:intergenic | 30.0% | |
TTCCAAGATACACGAATTTA+CGG | + | chr3_1:12195723-12195742 | Msa0348990:CDS | 30.0% | |
ATCAATGTGATTAACTATCC+CGG | + | chr3_1:12195797-12195816 | Msa0348990:three_prime_UTR | 30.0% | |
!!! | AGAAGAAGGTTTTGGTTTGT+TGG | - | chr3_1:12188824-12188843 | None:intergenic | 35.0% |
GTAACTTCTTTCAACAATGG+AGG | + | chr3_1:12188866-12188885 | Msa0348990:exon | 35.0% | |
TGTTTGATGAAATGCAGCAA+TGG | + | chr3_1:12189024-12189043 | Msa0348990:CDS | 35.0% | |
GTTTGATGAAATGCAGCAAT+GGG | + | chr3_1:12189025-12189044 | Msa0348990:CDS | 35.0% | |
AAATTCGTGAAACCACGTTT+AGG | + | chr3_1:12189069-12189088 | Msa0348990:CDS | 35.0% | |
AGATAATTTACCGGAACTTG+GGG | - | chr3_1:12189111-12189130 | None:intergenic | 35.0% | |
! | TATTATAGGTGATGACGTGT+TGG | - | chr3_1:12189221-12189240 | None:intergenic | 35.0% |
CTACATTGAGTTTATCGTGT+TGG | - | chr3_1:12189555-12189574 | None:intergenic | 35.0% | |
ATTAGAGATCAAGAGAGAGT+AGG | + | chr3_1:12189640-12189659 | Msa0348990:intron | 35.0% | |
TTAGAGATCAAGAGAGAGTA+GGG | + | chr3_1:12189641-12189660 | Msa0348990:intron | 35.0% | |
CTTCATATTGTGGTATTTGC+AGG | - | chr3_1:12189732-12189751 | None:intergenic | 35.0% | |
AATATGAAGAGCAGATCAGA+TGG | + | chr3_1:12189743-12189762 | Msa0348990:intron | 35.0% | |
CTTCTTCTGCTTCTAACAAT+TGG | - | chr3_1:12189777-12189796 | None:intergenic | 35.0% | |
CAATTGTTAGAAGCAGAAGA+AGG | + | chr3_1:12189775-12189794 | Msa0348990:intron | 35.0% | |
ATCTCACCACAAGAAAAAGA+GGG | - | chr3_1:12190097-12190116 | None:intergenic | 35.0% | |
AATCTCACCACAAGAAAAAG+AGG | - | chr3_1:12190098-12190117 | None:intergenic | 35.0% | |
! | CTTTTTCTTGTGGTGAGATT+AGG | + | chr3_1:12190098-12190117 | Msa0348990:intron | 35.0% |
ATTGTTTATGGTGCAGTTTC+TGG | + | chr3_1:12190128-12190147 | Msa0348990:CDS | 35.0% | |
GGCAGATTTGAAAAAGAAAG+AGG | + | chr3_1:12190470-12190489 | Msa0348990:CDS | 35.0% | |
AAAAAGAAAGAGGTAAGGAC+TGG | + | chr3_1:12190480-12190499 | Msa0348990:intron | 35.0% | |
GATCAAGCAATGTTCAAACT+AGG | - | chr3_1:12190680-12190699 | None:intergenic | 35.0% | |
GTTTGAACATTGCTTGATCT+TGG | + | chr3_1:12190681-12190700 | Msa0348990:intron | 35.0% | |
!!! | TATGTTTTTTGGTTACCTGG+GGG | + | chr3_1:12190752-12190771 | Msa0348990:intron | 35.0% |
! | AAAAGGTATGTGACTCCATT+AGG | - | chr3_1:12191197-12191216 | None:intergenic | 35.0% |
! | ATGAAATGCTGACCTGTTTT+TGG | + | chr3_1:12191309-12191328 | Msa0348990:intron | 35.0% |
! | ATGACAGCAATTGGAAGTAT+TGG | + | chr3_1:12191396-12191415 | Msa0348990:CDS | 35.0% |
! | GCAATCTTTTCATCATCTGA+AGG | - | chr3_1:12191447-12191466 | None:intergenic | 35.0% |
AATCACGCGTCAATAATTGA+TGG | + | chr3_1:12191486-12191505 | Msa0348990:CDS | 35.0% | |
! | AAACTCACAAGAGTGTATTG+AGG | - | chr3_1:12191578-12191597 | None:intergenic | 35.0% |
AGTATAGACTGTACCAAAAG+GGG | - | chr3_1:12191639-12191658 | None:intergenic | 35.0% | |
GAAAAATTGTGATAACCGAC+AGG | + | chr3_1:12191706-12191725 | Msa0348990:CDS | 35.0% | |
TGCTACTAGTGAAATAGAAC+TGG | + | chr3_1:12191739-12191758 | Msa0348990:intron | 35.0% | |
CGGATGCAAGTACATTATAT+AGG | - | chr3_1:12192129-12192148 | None:intergenic | 35.0% | |
AAATGCAATAAGGGAAAAGG+AGG | + | chr3_1:12192348-12192367 | Msa0348990:intron | 35.0% | |
! | TTATTGCAGCTTGTTTAGCA+TGG | + | chr3_1:12192437-12192456 | Msa0348990:intron | 35.0% |
GATGATGTAAGACCTCTTAT+TGG | + | chr3_1:12192528-12192547 | Msa0348990:intron | 35.0% | |
ACTAAGGTTAAGACCTAAGA+AGG | + | chr3_1:12192623-12192642 | Msa0348990:intron | 35.0% | |
CTAAGGTTAAGACCTAAGAA+GGG | + | chr3_1:12192624-12192643 | Msa0348990:intron | 35.0% | |
TAGTAGAGTGGGTAATTACT+TGG | - | chr3_1:12192716-12192735 | None:intergenic | 35.0% | |
TTTGTTTGTGGCAAAAATGG+TGG | + | chr3_1:12192868-12192887 | Msa0348990:CDS | 35.0% | |
AAGGATGTGGATATTTGCAT+TGG | + | chr3_1:12192919-12192938 | Msa0348990:CDS | 35.0% | |
! | TTATGTTTCTGCACTACATC+AGG | + | chr3_1:12193054-12193073 | Msa0348990:intron | 35.0% |
TGAATTCTTATAGCACATCG+TGG | + | chr3_1:12193129-12193148 | Msa0348990:intron | 35.0% | |
! | TATATTTTCAACTGCTACGC+CGG | + | chr3_1:12193184-12193203 | Msa0348990:CDS | 35.0% |
TATCAACTCAAGTACAACAC+TGG | - | chr3_1:12193241-12193260 | None:intergenic | 35.0% | |
TACCATGGTATGAAGGATAA+GGG | - | chr3_1:12193337-12193356 | None:intergenic | 35.0% | |
TTGTTGTCTGCAGAAGTAAT+TGG | + | chr3_1:12193579-12193598 | Msa0348990:intron | 35.0% | |
TGGTAAGGTTCCATGATTTA+TGG | + | chr3_1:12193667-12193686 | Msa0348990:intron | 35.0% | |
GGTAAGGTTCCATGATTTAT+GGG | + | chr3_1:12193668-12193687 | Msa0348990:intron | 35.0% | |
AACCCGTTTAAGAGATTAAG+AGG | + | chr3_1:12193774-12193793 | Msa0348990:intron | 35.0% | |
ACCCGTTTAAGAGATTAAGA+GGG | + | chr3_1:12193775-12193794 | Msa0348990:intron | 35.0% | |
ACCCTCTTAATCTCTTAAAC+GGG | - | chr3_1:12193779-12193798 | None:intergenic | 35.0% | |
CACCCTCTTAATCTCTTAAA+CGG | - | chr3_1:12193780-12193799 | None:intergenic | 35.0% | |
TTCCAAAAATACGGGTATAC+CGG | - | chr3_1:12193871-12193890 | None:intergenic | 35.0% | |
TTGGAAAACGAAACACTAGT+CGG | + | chr3_1:12193885-12193904 | Msa0348990:intron | 35.0% | |
GAATCGGAAAATGGTAAGAA+CGG | - | chr3_1:12194010-12194029 | None:intergenic | 35.0% | |
! | TTCTTACCATTTTCCGATTC+CGG | + | chr3_1:12194010-12194029 | Msa0348990:intron | 35.0% |
GTTGCTTGCATTCACAATAT+TGG | + | chr3_1:12194232-12194251 | Msa0348990:intron | 35.0% | |
! | ATATGATGGGACTTGTAACA+GGG | - | chr3_1:12194611-12194630 | None:intergenic | 35.0% |
AACAGGCATTTATTACAAGC+TGG | + | chr3_1:12194806-12194825 | Msa0348990:intron | 35.0% | |
AATAAAAGCTACTAACCTGC+AGG | - | chr3_1:12194876-12194895 | None:intergenic | 35.0% | |
! | TGTCTGGCTAGTGAATTTTT+CGG | - | chr3_1:12195038-12195057 | None:intergenic | 35.0% |
!!! | GTGATTTTTTTTGGTGTCCA+TGG | + | chr3_1:12195228-12195247 | Msa0348990:intron | 35.0% |
AATTAGAGAAAACGAGACCA+TGG | - | chr3_1:12195248-12195267 | None:intergenic | 35.0% | |
!! | TGTGGCTTTATTAGTAGTGA+GGG | - | chr3_1:12195323-12195342 | None:intergenic | 35.0% |
!! | ATGTGGCTTTATTAGTAGTG+AGG | - | chr3_1:12195324-12195343 | None:intergenic | 35.0% |
CTAATAAAGCCACATCTTTC+TGG | + | chr3_1:12195329-12195348 | Msa0348990:intron | 35.0% | |
ATACACTTCCAAACTGATGT+AGG | + | chr3_1:12195408-12195427 | Msa0348990:intron | 35.0% | |
TACACTTCCAAACTGATGTA+GGG | + | chr3_1:12195409-12195428 | Msa0348990:intron | 35.0% | |
TATTGTGGGTCATAATTGCA+TGG | - | chr3_1:12195452-12195471 | None:intergenic | 35.0% | |
!!! | CTTATTTTTGGGATAGACCA+AGG | - | chr3_1:12195487-12195506 | None:intergenic | 35.0% |
TATAGTTCACAATGCACATC+AGG | - | chr3_1:12195531-12195550 | None:intergenic | 35.0% | |
AAAGGTAAAAGATGTAGGCA+TGG | - | chr3_1:12195604-12195623 | None:intergenic | 35.0% | |
AAAACAGAGGCAAGAAAGAA+AGG | - | chr3_1:12195622-12195641 | None:intergenic | 35.0% | |
! | TTCTTTCTTGCCTCTGTTTT+AGG | + | chr3_1:12195622-12195641 | Msa0348990:intron | 35.0% |
TTTCCAAATCTTCCCTTGTA+TGG | - | chr3_1:12195671-12195690 | None:intergenic | 35.0% | |
TTATAGCTCTCCATTCTATC+AGG | + | chr3_1:12195765-12195784 | Msa0348990:exon | 35.0% | |
TGCAATTCATCCTGATAGAA+TGG | - | chr3_1:12195778-12195797 | None:intergenic | 35.0% | |
TAAGGACATTGCATTTGTAG+TGG | + | chr3_1:12195856-12195875 | Msa0348990:three_prime_UTR | 35.0% | |
! | GACAAAATAGCTTGTCACTA+TGG | - | chr3_1:12195902-12195921 | None:intergenic | 35.0% |
!!! | GTTTTGGTTTGTTGGTTGGT+TGG | - | chr3_1:12188816-12188835 | None:intergenic | 40.0% |
!!! | GAAGGTTTTGGTTTGTTGGT+TGG | - | chr3_1:12188820-12188839 | None:intergenic | 40.0% |
!! | CATGCAGTTGGTATTGGTAT+TGG | - | chr3_1:12188894-12188913 | None:intergenic | 40.0% |
CAATACCAATACCAACTGCA+TGG | + | chr3_1:12188892-12188911 | Msa0348990:CDS | 40.0% | |
! | AACTGCATGGTGGGAAAAAT+GGG | + | chr3_1:12188905-12188924 | Msa0348990:CDS | 40.0% |
! | AAGTACTCTGAGAGAGTCAA+GGG | - | chr3_1:12188949-12188968 | None:intergenic | 40.0% |
GTGAAACCACGTTTAGGAAA+TGG | + | chr3_1:12189075-12189094 | Msa0348990:CDS | 40.0% | |
ATGCATCCATTTCCTAAACG+TGG | - | chr3_1:12189084-12189103 | None:intergenic | 40.0% | |
GATGTTACAAGACTGAGTGT+TGG | + | chr3_1:12189521-12189540 | Msa0348990:intron | 40.0% | |
TGAAGATGAGAATGCTATGC+TGG | + | chr3_1:12189575-12189594 | Msa0348990:intron | 40.0% | |
GTGGAAATGGTAGATGAGAA+AGG | + | chr3_1:12189602-12189621 | Msa0348990:intron | 40.0% | |
TAGAGATCAAGAGAGAGTAG+GGG | + | chr3_1:12189642-12189661 | Msa0348990:intron | 40.0% | |
! | TTTGGTAATTTGGGTGTGTG+TGG | + | chr3_1:12189702-12189721 | Msa0348990:intron | 40.0% |
CTGATCTGCTCTTCATATTG+TGG | - | chr3_1:12189742-12189761 | None:intergenic | 40.0% | |
! | AAGTCTTATCACACTAGGTG+GGG | - | chr3_1:12189895-12189914 | None:intergenic | 40.0% |
! | CAAGTCTTATCACACTAGGT+GGG | - | chr3_1:12189896-12189915 | None:intergenic | 40.0% |
! | TTTCTGGTGATGATGAAGCA+GGG | + | chr3_1:12190144-12190163 | Msa0348990:CDS | 40.0% |
TGTTCTTGAGCTGCCTAATA+TGG | - | chr3_1:12190378-12190397 | None:intergenic | 40.0% | |
TATTAGGCAGCTCAAGAACA+TGG | + | chr3_1:12190378-12190397 | Msa0348990:intron | 40.0% | |
ATTAGGCAGCTCAAGAACAT+GGG | + | chr3_1:12190379-12190398 | Msa0348990:intron | 40.0% | |
CTCTAGCTGCCTATGATAAT+TGG | - | chr3_1:12190442-12190461 | None:intergenic | 40.0% | |
GAGAACTCCTTAAACTGTTC+TGG | + | chr3_1:12190508-12190527 | Msa0348990:intron | 40.0% | |
AAAACAACAACAATTCCCCC+AGG | - | chr3_1:12190770-12190789 | None:intergenic | 40.0% | |
AAGCACGTGTGAGACTATTT+GGG | - | chr3_1:12191000-12191019 | None:intergenic | 40.0% | |
TAAGCACGTGTGAGACTATT+TGG | - | chr3_1:12191001-12191020 | None:intergenic | 40.0% | |
AAGAAGGCAATCCTATAGCA+TGG | - | chr3_1:12191343-12191362 | None:intergenic | 40.0% | |
CAAATCCTGTAGGACAAAGA+AGG | - | chr3_1:12191359-12191378 | None:intergenic | 40.0% | |
ATATTGGCAGCAAATCCTGT+AGG | - | chr3_1:12191369-12191388 | None:intergenic | 40.0% | |
!! | TACAGGATTTGCTGCCAATA+TGG | + | chr3_1:12191368-12191387 | Msa0348990:CDS | 40.0% |
ACTTCCAATTGCTGTCATCA+AGG | - | chr3_1:12191394-12191413 | None:intergenic | 40.0% | |
!! | AGTATTGGTTCTCTCTTAGC+TGG | + | chr3_1:12191411-12191430 | Msa0348990:CDS | 40.0% |
!! | GTATTGGTTCTCTCTTAGCT+GGG | + | chr3_1:12191412-12191431 | Msa0348990:CDS | 40.0% |
! | TCACAAGAGTGTATTGAGGT+GGG | - | chr3_1:12191574-12191593 | None:intergenic | 40.0% |
! | TTCATTCCCTATTCCCCTTT+TGG | + | chr3_1:12191623-12191642 | Msa0348990:intron | 40.0% |
ACTGTACCAAAAGGGGAATA+GGG | - | chr3_1:12191632-12191651 | None:intergenic | 40.0% | |
TAGCAGAATGACTAACCTGT+CGG | - | chr3_1:12191724-12191743 | None:intergenic | 40.0% | |
! | AATTAGTGGATCACACGTGA+TGG | + | chr3_1:12191889-12191908 | Msa0348990:intron | 40.0% |
! | CAAGCATTGTCTCTTCTCTA+CGG | - | chr3_1:12192149-12192168 | None:intergenic | 40.0% |
ACAAAAAGCCATGCTTCTTG+CGG | - | chr3_1:12192500-12192519 | None:intergenic | 40.0% | |
!! | ATGTATATGGTTCTGATCCC+CGG | + | chr3_1:12192600-12192619 | Msa0348990:intron | 40.0% |
TTAGGTCTTAACCTTAGTCC+GGG | - | chr3_1:12192621-12192640 | None:intergenic | 40.0% | |
CTTAGGTCTTAACCTTAGTC+CGG | - | chr3_1:12192622-12192641 | None:intergenic | 40.0% | |
AGTGGGTAATTACTTGGAGT+GGG | - | chr3_1:12192710-12192729 | None:intergenic | 40.0% | |
TGAGGAGTTCAATTGTGAGA+AGG | + | chr3_1:12192900-12192919 | Msa0348990:CDS | 40.0% | |
GTTCAATTGTGAGAAGGATG+TGG | + | chr3_1:12192906-12192925 | Msa0348990:CDS | 40.0% | |
TGCAAGCTATAAATCCTCCA+TGG | - | chr3_1:12192969-12192988 | None:intergenic | 40.0% | |
! | ATGGAGGATTTATAGCTTGC+AGG | + | chr3_1:12192968-12192987 | Msa0348990:CDS | 40.0% |
GTAAACTATCTGTGTACACG+TGG | + | chr3_1:12192990-12193009 | Msa0348990:intron | 40.0% | |
CTACCATGGTATGAAGGATA+AGG | - | chr3_1:12193338-12193357 | None:intergenic | 40.0% | |
GTTTGTCTACCATGGTATGA+AGG | - | chr3_1:12193344-12193363 | None:intergenic | 40.0% | |
CTCGAGATCCTAAGTAAGAT+CGG | + | chr3_1:12193363-12193382 | Msa0348990:intron | 40.0% | |
TCGAGATCCTAAGTAAGATC+GGG | + | chr3_1:12193364-12193383 | Msa0348990:intron | 40.0% | |
! | GAAGTTGGGTGCTATGAATA+TGG | + | chr3_1:12193635-12193654 | Msa0348990:intron | 40.0% |
TCCAAAAATACGGGTATACC+GGG | - | chr3_1:12193870-12193889 | None:intergenic | 40.0% | |
TGGAAAACGAAACACTAGTC+GGG | + | chr3_1:12193886-12193905 | Msa0348990:intron | 40.0% | |
ATAACGATCGGTATGAAGCA+TGG | - | chr3_1:12194112-12194131 | None:intergenic | 40.0% | |
AGATCATGCTAGAAGTGAGA+GGG | - | chr3_1:12194179-12194198 | None:intergenic | 40.0% | |
AAGATCATGCTAGAAGTGAG+AGG | - | chr3_1:12194180-12194199 | None:intergenic | 40.0% | |
TGTGAATGCAAGCAACAATC+AGG | - | chr3_1:12194228-12194247 | None:intergenic | 40.0% | |
GACTGCTTGAGTTCATATGA+AGG | + | chr3_1:12194254-12194273 | Msa0348990:intron | 40.0% | |
GCAAATGAAAGTCTTTCACC+CGG | - | chr3_1:12194578-12194597 | None:intergenic | 40.0% | |
! | GATATGATGGGACTTGTAAC+AGG | - | chr3_1:12194612-12194631 | None:intergenic | 40.0% |
CCAACGATAAGGGATATGAT+GGG | - | chr3_1:12194624-12194643 | None:intergenic | 40.0% | |
! | ACTTTCCCTCCCATCATTTT+TGG | + | chr3_1:12194691-12194710 | Msa0348990:intron | 40.0% |
CATTGGGCACCAAAAATGAT+GGG | - | chr3_1:12194703-12194722 | None:intergenic | 40.0% | |
TCATTGGGCACCAAAAATGA+TGG | - | chr3_1:12194704-12194723 | None:intergenic | 40.0% | |
!! | ATGATCAGCTTCTGAAGTAG+TGG | - | chr3_1:12194748-12194767 | None:intergenic | 40.0% |
!! | GCTCGTAACTGTTTCTACAT+TGG | + | chr3_1:12195002-12195021 | Msa0348990:intron | 40.0% |
!! | GCTAGTGAATTTTTCGGCTA+GGG | - | chr3_1:12195032-12195051 | None:intergenic | 40.0% |
TTGACTGAGTCATTTGTGTC+TGG | - | chr3_1:12195054-12195073 | None:intergenic | 40.0% | |
! | TTTTCGTGAGAAGCGACTAA+AGG | + | chr3_1:12195147-12195166 | Msa0348990:intron | 40.0% |
AGCGACTAAAGGATAGAGTA+AGG | + | chr3_1:12195158-12195177 | Msa0348990:intron | 40.0% | |
GCGACTAAAGGATAGAGTAA+GGG | + | chr3_1:12195159-12195178 | Msa0348990:intron | 40.0% | |
AGGATAGAGTAAGGGATAAC+TGG | + | chr3_1:12195167-12195186 | Msa0348990:intron | 40.0% | |
! | GCTTTATTAGTAGTGAGGGT+GGG | - | chr3_1:12195319-12195338 | None:intergenic | 40.0% |
! | TCTTTCTGGAAGTGCACAAT+CGG | + | chr3_1:12195343-12195362 | Msa0348990:intron | 40.0% |
GGTTAGGCCAAACTTATTGT+GGG | - | chr3_1:12195466-12195485 | None:intergenic | 40.0% | |
AGGTTAGGCCAAACTTATTG+TGG | - | chr3_1:12195467-12195486 | None:intergenic | 40.0% | |
CAATAAGTTTGGCCTAACCT+TGG | + | chr3_1:12195467-12195486 | Msa0348990:intron | 40.0% | |
!!! | TTTTGGGATAGACCAAGGTT+AGG | - | chr3_1:12195482-12195501 | None:intergenic | 40.0% |
!! | TGGCTGGACAGCTTATTTTT+GGG | - | chr3_1:12195498-12195517 | None:intergenic | 40.0% |
!! | ATGGCTGGACAGCTTATTTT+TGG | - | chr3_1:12195499-12195518 | None:intergenic | 40.0% |
AGTCCATACAAGGGAAGATT+TGG | + | chr3_1:12195665-12195684 | Msa0348990:CDS | 40.0% | |
ATTGATGCAATTCGAGAGTG+CGG | - | chr3_1:12195703-12195722 | None:intergenic | 40.0% | |
AGCCGTAAATTCGTGTATCT+TGG | - | chr3_1:12195728-12195747 | None:intergenic | 40.0% | |
AGACTCAATAATGCTGGCAA+TGG | - | chr3_1:12195832-12195851 | None:intergenic | 40.0% | |
!! | GGTTTGTTGGTTGGTTGGTT+TGG | - | chr3_1:12188811-12188830 | None:intergenic | 45.0% |
TACCAATACCAACTGCATGG+TGG | + | chr3_1:12188895-12188914 | Msa0348990:CDS | 45.0% | |
ACCAATACCAACTGCATGGT+GGG | + | chr3_1:12188896-12188915 | Msa0348990:CDS | 45.0% | |
! | CATTTTTCCCACCATGCAGT+TGG | - | chr3_1:12188906-12188925 | None:intergenic | 45.0% |
! | CAACTGCATGGTGGGAAAAA+TGG | + | chr3_1:12188904-12188923 | Msa0348990:CDS | 45.0% |
! | GAAGTACTCTGAGAGAGTCA+AGG | - | chr3_1:12188950-12188969 | None:intergenic | 45.0% |
ACCTCACGTTGGAGACAAAT+GGG | - | chr3_1:12188984-12189003 | None:intergenic | 45.0% | |
TACCTCACGTTGGAGACAAA+TGG | - | chr3_1:12188985-12189004 | None:intergenic | 45.0% | |
CATCATCATCTACCTCACGT+TGG | - | chr3_1:12188995-12189014 | None:intergenic | 45.0% | |
! | GGTAGATGATGATGCGTTTC+AGG | + | chr3_1:12189001-12189020 | Msa0348990:CDS | 45.0% |
ATGGGATCGTTCTTCTGTTG+AGG | + | chr3_1:12189043-12189062 | Msa0348990:CDS | 45.0% | |
ATGCATGATACCCCAAGTTC+CGG | + | chr3_1:12189098-12189117 | Msa0348990:CDS | 45.0% | |
CGGTGTGTTATGTCTTGTGT+GGG | - | chr3_1:12189186-12189205 | None:intergenic | 45.0% | |
CCACACAAGACATAACACAC+CGG | + | chr3_1:12189184-12189203 | Msa0348990:intron | 45.0% | |
AGAATGCTATGCTGGATGAG+TGG | + | chr3_1:12189583-12189602 | Msa0348990:intron | 45.0% | |
CTATGCTGGATGAGTGGAAA+TGG | + | chr3_1:12189589-12189608 | Msa0348990:intron | 45.0% | |
! | CCAAGTCTTATCACACTAGG+TGG | - | chr3_1:12189897-12189916 | None:intergenic | 45.0% |
CCACCTAGTGTGATAAGACT+TGG | + | chr3_1:12189894-12189913 | Msa0348990:intron | 45.0% | |
! | CGACCAAGTCTTATCACACT+AGG | - | chr3_1:12189900-12189919 | None:intergenic | 45.0% |
!! | GTTTCTGGTGATGATGAAGC+AGG | + | chr3_1:12190143-12190162 | Msa0348990:CDS | 45.0% |
TTCCCATCCGACTATTGGAA+AGG | + | chr3_1:12190229-12190248 | Msa0348990:CDS | 45.0% | |
AGCCTTTCCAATAGTCGGAT+GGG | - | chr3_1:12190234-12190253 | None:intergenic | 45.0% | |
TATTGGAAAGGCTGCTGCAA+AGG | + | chr3_1:12190241-12190260 | Msa0348990:CDS | 45.0% | |
CAAATAAGAGCAGAACCCCT+TGG | - | chr3_1:12190411-12190430 | None:intergenic | 45.0% | |
! | AGGGGTTCTGCTCTTATTTG+TGG | + | chr3_1:12190411-12190430 | Msa0348990:CDS | 45.0% |
ATGGGGGAAAGTGATGTTCA+AGG | + | chr3_1:12190724-12190743 | Msa0348990:intron | 45.0% | |
GATTGCCTTCTTTGTCCTAC+AGG | + | chr3_1:12191351-12191370 | Msa0348990:CDS | 45.0% | |
TGCTGTCATCAAGGCCATAT+TGG | - | chr3_1:12191385-12191404 | None:intergenic | 45.0% | |
! | ATGGCCTTGATGACAGCAAT+TGG | + | chr3_1:12191387-12191406 | Msa0348990:CDS | 45.0% |
ATGGTATTCGTCTTGCTGAG+CGG | + | chr3_1:12191505-12191524 | Msa0348990:CDS | 45.0% | |
! | CTCACAAGAGTGTATTGAGG+TGG | - | chr3_1:12191575-12191594 | None:intergenic | 45.0% |
GACTGTACCAAAAGGGGAAT+AGG | - | chr3_1:12191633-12191652 | None:intergenic | 45.0% | |
! | CAGTGATGGTGTGTGCATTA+TGG | + | chr3_1:12192404-12192423 | Msa0348990:intron | 45.0% |
! | TGCAGCTTGTTTAGCATGGA+TGG | + | chr3_1:12192441-12192460 | Msa0348990:intron | 45.0% |
! | GCAGCTTGTTTAGCATGGAT+GGG | + | chr3_1:12192442-12192461 | Msa0348990:intron | 45.0% |
! | CAGCTTGTTTAGCATGGATG+GGG | + | chr3_1:12192443-12192462 | Msa0348990:intron | 45.0% |
AGTTCTGCAAGCTCAACCAT+TGG | - | chr3_1:12192477-12192496 | None:intergenic | 45.0% | |
TAGGTCTTAACCTTAGTCCG+GGG | - | chr3_1:12192620-12192639 | None:intergenic | 45.0% | |
GAGTGGGTAATTACTTGGAG+TGG | - | chr3_1:12192711-12192730 | None:intergenic | 45.0% | |
AAACAAATGTCCCATGAGCC+TGG | - | chr3_1:12192855-12192874 | None:intergenic | 45.0% | |
GCTCATGGGACATTTGTTTG+TGG | + | chr3_1:12192856-12192875 | Msa0348990:CDS | 45.0% | |
GTTTGTGGCAAAAATGGTGG+TGG | + | chr3_1:12192871-12192890 | Msa0348990:CDS | 45.0% | |
GGTACACTAAGTAAAGCTGC+CGG | + | chr3_1:12192940-12192959 | Msa0348990:CDS | 45.0% | |
TATAAATCCTCCATGGCAGC+CGG | - | chr3_1:12192962-12192981 | None:intergenic | 45.0% | |
TGCCCTTATCCTTCATACCA+TGG | + | chr3_1:12193332-12193351 | Msa0348990:intron | 45.0% | |
GATCTCGAGTTTGTCTACCA+TGG | - | chr3_1:12193352-12193371 | None:intergenic | 45.0% | |
GATCCTAAGTAAGATCGGGA+AGG | + | chr3_1:12193368-12193387 | Msa0348990:intron | 45.0% | |
AGGAACGTAAGAGAGGAAGT+TGG | + | chr3_1:12193620-12193639 | Msa0348990:intron | 45.0% | |
GGAACGTAAGAGAGGAAGTT+GGG | + | chr3_1:12193621-12193640 | Msa0348990:intron | 45.0% | |
AAAATACGGGTATACCGGGT+CGG | - | chr3_1:12193866-12193885 | None:intergenic | 45.0% | |
! | ACCCGGTATACCCGTATTTT+TGG | + | chr3_1:12193866-12193885 | Msa0348990:intron | 45.0% |
AGGTTGGAAACCCAGAAAAC+CGG | - | chr3_1:12193932-12193951 | None:intergenic | 45.0% | |
TCTGGGTTTCCAACCTAACT+CGG | + | chr3_1:12193936-12193955 | Msa0348990:intron | 45.0% | |
GGAAAATGGTAAGAACGGCT+TGG | - | chr3_1:12194005-12194024 | None:intergenic | 45.0% | |
ATCTGGACCGTAGAATCGTA+CGG | - | chr3_1:12194075-12194094 | None:intergenic | 45.0% | |
TGGTAGACAAACTCTCGATC+TGG | - | chr3_1:12194092-12194111 | None:intergenic | 45.0% | |
! | TTTTGCAGCTGCTGTTAGAG+TGG | + | chr3_1:12194515-12194534 | Msa0348990:intron | 45.0% |
GAGTGGCAAAACATGAGACA+TGG | + | chr3_1:12194532-12194551 | Msa0348990:CDS | 45.0% | |
ACATGAGACATGGCGTAGAA+AGG | + | chr3_1:12194542-12194561 | Msa0348990:CDS | 45.0% | |
! | GTAGAAAGGCCATTTGGAAC+CGG | + | chr3_1:12194556-12194575 | Msa0348990:CDS | 45.0% |
! | TAGAAAGGCCATTTGGAACC+GGG | + | chr3_1:12194557-12194576 | Msa0348990:CDS | 45.0% |
CCCATCATATCCCTTATCGT+TGG | + | chr3_1:12194621-12194640 | Msa0348990:CDS | 45.0% | |
GCCAACGATAAGGGATATGA+TGG | - | chr3_1:12194625-12194644 | None:intergenic | 45.0% | |
GTCTTCAGTGCCAACGATAA+GGG | - | chr3_1:12194634-12194653 | None:intergenic | 45.0% | |
TGTCTTCAGTGCCAACGATA+AGG | - | chr3_1:12194635-12194654 | None:intergenic | 45.0% | |
! | AATGATGGGAGGGAAAGTGA+GGG | - | chr3_1:12194689-12194708 | None:intergenic | 45.0% |
! | AAATGATGGGAGGGAAAGTG+AGG | - | chr3_1:12194690-12194709 | None:intergenic | 45.0% |
ACTTCAGAAGCTGATCATGC+AGG | + | chr3_1:12194750-12194769 | Msa0348990:intron | 45.0% | |
!! | GGCTAGTGAATTTTTCGGCT+AGG | - | chr3_1:12195033-12195052 | None:intergenic | 45.0% |
!! | GGCTTTATTAGTAGTGAGGG+TGG | - | chr3_1:12195320-12195339 | None:intergenic | 45.0% |
TGTGCACTTCCAGAAAGATG+TGG | - | chr3_1:12195341-12195360 | None:intergenic | 45.0% | |
ACTTCCAAACTGATGTAGGG+AGG | + | chr3_1:12195412-12195431 | Msa0348990:intron | 45.0% | |
CTTCCAAACTGATGTAGGGA+GGG | + | chr3_1:12195413-12195432 | Msa0348990:intron | 45.0% | |
AATAAGCTGTCCAGCCATTG+AGG | + | chr3_1:12195501-12195520 | Msa0348990:intron | 45.0% | |
GTTCACAATGCACATCAGGT+CGG | - | chr3_1:12195527-12195546 | None:intergenic | 45.0% | |
ACACGAATTTACGGCTGCAA+TGG | + | chr3_1:12195732-12195751 | Msa0348990:CDS | 45.0% | |
!! | ATATAAAAAAGATATTAAAA+GGG | - | chr3_1:12189366-12189385 | None:intergenic | 5.0% |
!! | TATATAAAAAAGATATTAAA+AGG | - | chr3_1:12189367-12189386 | None:intergenic | 5.0% |
!!! | AATATCTTTTTTATATATAA+AGG | + | chr3_1:12189370-12189389 | Msa0348990:intron | 5.0% |
!!! | TATATATGAATTTTTAAATT+TGG | - | chr3_1:12193444-12193463 | None:intergenic | 5.0% |
! | TCCCACCATGCAGTTGGTAT+TGG | - | chr3_1:12188900-12188919 | None:intergenic | 50.0% |
GTGGGAAAAATGGGTCGAAG+AGG | + | chr3_1:12188914-12188933 | Msa0348990:CDS | 50.0% | |
ACCCATTTGTCTCCAACGTG+AGG | + | chr3_1:12188980-12188999 | Msa0348990:CDS | 50.0% | |
CCGGTGTGTTATGTCTTGTG+TGG | - | chr3_1:12189187-12189206 | None:intergenic | 50.0% | |
! | CGTGTTGGCATTGTCATGTC+CGG | - | chr3_1:12189206-12189225 | None:intergenic | 50.0% |
GACACAAGTCGAACATCACC+AGG | + | chr3_1:12189300-12189319 | Msa0348990:intron | 50.0% | |
AAGTCGAACATCACCAGGCA+CGG | + | chr3_1:12189305-12189324 | Msa0348990:intron | 50.0% | |
CTTATCACACTAGGTGGGGT+TGG | - | chr3_1:12189891-12189910 | None:intergenic | 50.0% | |
CAATAGTCGGATGGGAACTC+AGG | - | chr3_1:12190226-12190245 | None:intergenic | 50.0% | |
CTGAGTTCCCATCCGACTAT+TGG | + | chr3_1:12190224-12190243 | Msa0348990:CDS | 50.0% | |
CAGCCTTTCCAATAGTCGGA+TGG | - | chr3_1:12190235-12190254 | None:intergenic | 50.0% | |
GCAGCAGCCTTTCCAATAGT+CGG | - | chr3_1:12190239-12190258 | None:intergenic | 50.0% | |
GCAGCTCAAGAACATGGGAT+GGG | + | chr3_1:12190384-12190403 | Msa0348990:CDS | 50.0% | |
AAGAACATGGGATGGGACCA+AGG | + | chr3_1:12190391-12190410 | Msa0348990:CDS | 50.0% | |
AGAACATGGGATGGGACCAA+GGG | + | chr3_1:12190392-12190411 | Msa0348990:CDS | 50.0% | |
TAGGCAGCTAGAGTCGAGTT+TGG | + | chr3_1:12190449-12190468 | Msa0348990:CDS | 50.0% | |
GTCTTGCTGAGCGGCAAAAA+GGG | + | chr3_1:12191514-12191533 | Msa0348990:CDS | 50.0% | |
TCTTGCTGAGCGGCAAAAAG+GGG | + | chr3_1:12191515-12191534 | Msa0348990:CDS | 50.0% | |
GGTACGGAATCTGTACTCGA+TGG | - | chr3_1:12192663-12192682 | None:intergenic | 50.0% | |
AATGTGCGTTTCCAGGCTCA+TGG | + | chr3_1:12192841-12192860 | Msa0348990:intron | 50.0% | |
ATGTGCGTTTCCAGGCTCAT+GGG | + | chr3_1:12192842-12192861 | Msa0348990:intron | 50.0% | |
!! | AAATGGTGGTGGTGTTGCTG+AGG | + | chr3_1:12192882-12192901 | Msa0348990:CDS | 50.0% |
GGTCCTTCCCGATCTTACTT+AGG | - | chr3_1:12193374-12193393 | None:intergenic | 50.0% | |
GGACCCATGAGATCGTGAAT+CGG | + | chr3_1:12193389-12193408 | Msa0348990:intron | 50.0% | |
GACCCATGAGATCGTGAATC+GGG | + | chr3_1:12193390-12193409 | Msa0348990:intron | 50.0% | |
ACCCATGAGATCGTGAATCG+GGG | + | chr3_1:12193391-12193410 | Msa0348990:intron | 50.0% | |
TGAATCGGGGGATCGTAACA+CGG | + | chr3_1:12193404-12193423 | Msa0348990:intron | 50.0% | |
AAATACGGGTATACCGGGTC+GGG | - | chr3_1:12193865-12193884 | None:intergenic | 50.0% | |
GGTTGGAAACCCAGAAAACC+GGG | - | chr3_1:12193931-12193950 | None:intergenic | 50.0% | |
TAGATCCAGCCGAGTTAGGT+TGG | - | chr3_1:12193948-12193967 | None:intergenic | 50.0% | |
AACGTAGATCCAGCCGAGTT+AGG | - | chr3_1:12193952-12193971 | None:intergenic | 50.0% | |
CGTGGAACCGTACGATTCTA+CGG | + | chr3_1:12194065-12194084 | Msa0348990:intron | 50.0% | |
CATGGCGTAGAAAGGCCATT+TGG | + | chr3_1:12194550-12194569 | Msa0348990:CDS | 50.0% | |
GTCTTTCACCCGGTTCCAAA+TGG | - | chr3_1:12194568-12194587 | None:intergenic | 50.0% | |
!! | ACAAAGCACTGCAAGCAAGC+CGG | + | chr3_1:12194652-12194671 | Msa0348990:CDS | 50.0% |
! | GGGCACCAAAAATGATGGGA+GGG | - | chr3_1:12194699-12194718 | None:intergenic | 50.0% |
! | TGGGCACCAAAAATGATGGG+AGG | - | chr3_1:12194700-12194719 | None:intergenic | 50.0% |
GTGGTCTGATTGCAGTCACA+TGG | - | chr3_1:12194835-12194854 | None:intergenic | 50.0% | |
ACTAACCTGCAGGAGTTAGG+AGG | - | chr3_1:12194866-12194885 | None:intergenic | 50.0% | |
GCTACTAACCTGCAGGAGTT+AGG | - | chr3_1:12194869-12194888 | None:intergenic | 50.0% | |
!! | GTGAATTTTTCGGCTAGGGC+AGG | - | chr3_1:12195028-12195047 | None:intergenic | 50.0% |
ACTCCCTCCCTACATCAGTT+TGG | - | chr3_1:12195419-12195438 | None:intergenic | 50.0% | |
CCACTCGCAACCTAAAACAG+AGG | - | chr3_1:12195635-12195654 | None:intergenic | 50.0% | |
!!! | CCTCTGTTTTAGGTTGCGAG+TGG | + | chr3_1:12195632-12195651 | Msa0348990:intron | 50.0% |
! | CCTTGTATGGACTGCACTGA+GGG | - | chr3_1:12195658-12195677 | None:intergenic | 50.0% |
CCTCAGTGCAGTCCATACAA+GGG | + | chr3_1:12195656-12195675 | Msa0348990:CDS | 50.0% | |
TGGCAATGGTGTACTGTTCC+GGG | - | chr3_1:12195818-12195837 | None:intergenic | 50.0% | |
CTGGCAATGGTGTACTGTTC+CGG | - | chr3_1:12195819-12195838 | None:intergenic | 50.0% | |
CACACTCTGTAATCCGTGCC+TGG | - | chr3_1:12189321-12189340 | None:intergenic | 55.0% | |
GGCAGCTCAAGAACATGGGA+TGG | + | chr3_1:12190383-12190402 | Msa0348990:intron | 55.0% | |
GAACATGGGATGGGACCAAG+GGG | + | chr3_1:12190393-12190412 | Msa0348990:CDS | 55.0% | |
CGTCTTGCTGAGCGGCAAAA+AGG | + | chr3_1:12191513-12191532 | Msa0348990:CDS | 55.0% | |
GGATGGGGACTTTGCACCAA+TGG | + | chr3_1:12192458-12192477 | Msa0348990:CDS | 55.0% | |
GCAGAACTCCGCAAGAAGCA+TGG | + | chr3_1:12192489-12192508 | Msa0348990:CDS | 55.0% | |
!! | TGGTTCTGATCCCCGGACTA+AGG | + | chr3_1:12192607-12192626 | Msa0348990:intron | 55.0% |
CCCCCGATTCACGATCTCAT+GGG | - | chr3_1:12193395-12193414 | None:intergenic | 55.0% | |
CCCATGAGATCGTGAATCGG+GGG | + | chr3_1:12193392-12193411 | Msa0348990:intron | 55.0% | |
TCCCCCGATTCACGATCTCA+TGG | - | chr3_1:12193396-12193415 | None:intergenic | 55.0% | |
AACCCAGAAAACCGGGTTCG+CGG | - | chr3_1:12193924-12193943 | None:intergenic | 55.0% | |
GGTTTCCAACCTAACTCGGC+TGG | + | chr3_1:12193940-12193959 | Msa0348990:intron | 55.0% | |
AGGTGGCCGGAATCGGAAAA+TGG | - | chr3_1:12194019-12194038 | None:intergenic | 55.0% | |
TGCTCATAGGTGGCCGGAAT+CGG | - | chr3_1:12194026-12194045 | None:intergenic | 55.0% | |
TCTTCGTGCTCATAGGTGGC+CGG | - | chr3_1:12194032-12194051 | None:intergenic | 55.0% | |
GACCTCTTCGTGCTCATAGG+TGG | - | chr3_1:12194036-12194055 | None:intergenic | 55.0% | |
CCTGACCTCTTCGTGCTCAT+AGG | - | chr3_1:12194039-12194058 | None:intergenic | 55.0% | |
CCTATGAGCACGAAGAGGTC+AGG | + | chr3_1:12194036-12194055 | Msa0348990:intron | 55.0% | |
GAAGAGGTCAGGCAAGATCG+TGG | + | chr3_1:12194047-12194066 | Msa0348990:intron | 55.0% | |
AGTGAGGGAGGGATGCATAC+CGG | - | chr3_1:12194674-12194693 | None:intergenic | 55.0% | |
ATGGGAGGGAAAGTGAGGGA+GGG | - | chr3_1:12194685-12194704 | None:intergenic | 55.0% | |
! | GAGTTAGGAGGCACAGTTGG+TGG | - | chr3_1:12194854-12194873 | None:intergenic | 55.0% |
! | CAGGAGTTAGGAGGCACAGT+TGG | - | chr3_1:12194857-12194876 | None:intergenic | 55.0% |
CCCTCAGTGCAGTCCATACA+AGG | + | chr3_1:12195655-12195674 | Msa0348990:CDS | 55.0% | |
! | CCCTTGTATGGACTGCACTG+AGG | - | chr3_1:12195659-12195678 | None:intergenic | 55.0% |
! | AGTAAAGCTGCCGGCTGCCA+TGG | + | chr3_1:12192949-12192968 | Msa0348990:CDS | 60.0% |
GCAGCAGCAGCAACTGGAAC+CGG | - | chr3_1:12193206-12193225 | None:intergenic | 60.0% | |
CCATGAGCAGCAGCAGCAAC+TGG | - | chr3_1:12193212-12193231 | None:intergenic | 60.0% | |
CCAGTTGCTGCTGCTGCTCA+TGG | + | chr3_1:12193209-12193228 | Msa0348990:CDS | 60.0% | |
! | ACCCGCGAACCCGGTTTTCT+GGG | + | chr3_1:12193919-12193938 | Msa0348990:intron | 60.0% |
ACCCAGAAAACCGGGTTCGC+GGG | - | chr3_1:12193923-12193942 | None:intergenic | 60.0% | |
CTACGTTACCACCGCGTCCA+CGG | + | chr3_1:12193965-12193984 | Msa0348990:intron | 60.0% | |
GGCCACCTATGAGCACGAAG+AGG | + | chr3_1:12194031-12194050 | Msa0348990:intron | 60.0% | |
GATGGGAGGGAAAGTGAGGG+AGG | - | chr3_1:12194686-12194705 | None:intergenic | 60.0% | |
CTGTGCCTCCTAACTCCTGC+AGG | + | chr3_1:12194858-12194877 | Msa0348990:CDS | 60.0% | |
ATCAGGTCGGCCTCAATGGC+TGG | - | chr3_1:12195514-12195533 | None:intergenic | 60.0% | |
GCACATCAGGTCGGCCTCAA+TGG | - | chr3_1:12195518-12195537 | None:intergenic | 60.0% | |
! | AAAGCTGCCGGCTGCCATGG+AGG | + | chr3_1:12192952-12192971 | Msa0348990:CDS | 65.0% |
CGCAAAACGACCCGCGAACC+CGG | + | chr3_1:12193910-12193929 | Msa0348990:intron | 65.0% | |
! | GACCCGCGAACCCGGTTTTC+TGG | + | chr3_1:12193918-12193937 | Msa0348990:intron | 65.0% |
ACCGGGTCACGAACCCGACC+CGG | + | chr3_1:12193849-12193868 | Msa0348990:intron | 70.0% | |
ACCGGGTCGGGTTCGTGACC+CGG | - | chr3_1:12193853-12193872 | None:intergenic | 70.0% | |
ACCGCGTCCACGGCTTTGCG+CGG | + | chr3_1:12193975-12193994 | Msa0348990:intron | 70.0% | |
TGGATCGCCGCGCAAAGCCG+TGG | - | chr3_1:12193985-12194004 | None:intergenic | 70.0% | |
GCGCAAAGCCGTGGACGCGG+TGG | - | chr3_1:12193976-12193995 | None:intergenic | 75.0% | |
GCCGCGCAAAGCCGTGGACG+CGG | - | chr3_1:12193979-12193998 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 12188807 | 12195974 | 12188807 | ID=Msa0348990;Name=Msa0348990 |
chr3_1 | mRNA | 12188807 | 12195974 | 12188807 | ID=Msa0348990-mRNA-1;Parent=Msa0348990;Name=Msa0348990-mRNA-1;_AED=0.13;_eAED=0.13;_QI=75|1|1|1|1|1|11|204|475 |
chr3_1 | exon | 12188807 | 12189119 | 12188807 | ID=Msa0348990-mRNA-1:exon:3176;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12190120 | 12190262 | 12190120 | ID=Msa0348990-mRNA-1:exon:3177;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12190384 | 12190491 | 12190384 | ID=Msa0348990-mRNA-1:exon:3178;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12191351 | 12191589 | 12191351 | ID=Msa0348990-mRNA-1:exon:3179;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12191686 | 12191727 | 12191686 | ID=Msa0348990-mRNA-1:exon:3180;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12192446 | 12192533 | 12192446 | ID=Msa0348990-mRNA-1:exon:3181;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12192856 | 12192989 | 12192856 | ID=Msa0348990-mRNA-1:exon:3182;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12193142 | 12193230 | 12193142 | ID=Msa0348990-mRNA-1:exon:3183;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12194523 | 12194673 | 12194523 | ID=Msa0348990-mRNA-1:exon:3184;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12194811 | 12194879 | 12194811 | ID=Msa0348990-mRNA-1:exon:3185;Parent=Msa0348990-mRNA-1 |
chr3_1 | exon | 12195644 | 12195974 | 12195644 | ID=Msa0348990-mRNA-1:exon:3186;Parent=Msa0348990-mRNA-1 |
chr3_1 | five_prime_UTR | 12188807 | 12188881 | 12188807 | ID=Msa0348990-mRNA-1:five_prime_utr;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12188882 | 12189119 | 12188882 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12190120 | 12190262 | 12190120 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12190384 | 12190491 | 12190384 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12191351 | 12191589 | 12191351 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12191686 | 12191727 | 12191686 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12192446 | 12192533 | 12192446 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12192856 | 12192989 | 12192856 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12193142 | 12193230 | 12193142 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12194523 | 12194673 | 12194523 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12194811 | 12194879 | 12194811 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | CDS | 12195644 | 12195770 | 12195644 | ID=Msa0348990-mRNA-1:cds;Parent=Msa0348990-mRNA-1 |
chr3_1 | three_prime_UTR | 12195771 | 12195974 | 12195771 | ID=Msa0348990-mRNA-1:three_prime_utr;Parent=Msa0348990-mRNA-1 |
Gene Sequence |
Protein sequence |