AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0404120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404120 MtrunA17_Chr3g0115151 92.271 841 35 5 67 880 1 838 0.0 1598
Msa0404120 MtrunA17_Chr5g0424491 70.133 904 226 10 1 880 1 884 0.0 1335
Msa0404120 MtrunA17_Chr3g0115131 69.901 907 215 12 1 880 1 876 0.0 1292
Msa0404120 MtrunA17_Chr6g0459641 35.179 307 177 8 100 399 20 311 6.53e-49 178
Msa0404120 MtrunA17_Chr7g0254371 39.370 254 129 7 621 871 39 270 6.98e-49 174
Msa0404120 MtrunA17_Chr3g0118791 39.764 254 128 7 621 871 39 270 8.07e-48 171
Msa0404120 MtrunA17_Chr8g0355241 38.462 260 135 8 620 877 55 291 8.32e-47 169
Msa0404120 MtrunA17_Chr4g0063451 35.273 275 144 6 591 859 47 293 4.49e-43 159
Msa0404120 MtrunA17_Chr7g0227151 30.530 321 175 10 167 456 30 333 4.85e-36 139
Msa0404120 MtrunA17_Chr5g0419651 49.398 83 41 1 503 584 1 83 9.41e-19 83.2
Msa0404120 MtrunA17_Chr7g0276081 45.679 81 43 1 505 584 4 84 9.51e-18 80.9
Msa0404120 MtrunA17_Chr4g0010061 41.026 78 45 1 508 584 19 96 2.26e-17 80.1
Msa0404120 MtrunA17_Chr3g0127451 36.585 123 74 3 503 621 1 123 4.06e-17 79.0
Msa0404120 MtrunA17_Chr8g0346311 46.250 80 42 1 503 581 1 80 5.70e-17 78.6
Msa0404120 MtrunA17_Chr6g0486891 42.529 87 48 2 496 581 32 117 6.76e-14 68.9
Msa0404120 MtrunA17_Chr3g0134591 34.177 79 51 1 504 581 1 79 2.54e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0404120 AT1G77760.1 71.326 837 207 8 70 880 88 917 0.0 1283
Msa0404120 AT1G37130.1 66.015 921 268 10 1 880 1 917 0.0 1244
Msa0404120 AT3G01910.1 32.845 341 202 9 100 428 20 345 1.36e-54 194
Msa0404120 AT5G17770.1 40.234 256 128 8 619 871 40 273 6.81e-49 175
Msa0404120 AT5G20080.1 35.294 272 135 8 619 871 71 320 7.51e-40 150
Msa0404120 AT3G01910.2 31.559 263 152 6 179 428 3 250 1.82e-37 143
Msa0404120 AT3G01910.3 31.401 207 120 6 229 428 2 193 8.52e-27 110
Msa0404120 AT5G48810.1 46.154 78 41 1 508 584 6 83 1.08e-19 86.7
Msa0404120 AT2G32720.1 45.000 80 43 1 503 581 1 80 1.39e-19 86.3
Msa0404120 AT5G53560.1 38.000 100 59 2 503 599 1 100 1.59e-17 80.5
Msa0404120 AT1G26340.1 42.500 80 45 1 503 581 1 80 3.88e-16 76.3
Msa0404120 AT1G60660.1 39.796 98 56 3 486 581 24 120 5.49e-14 69.7
Msa0404120 AT2G32720.2 37.500 80 49 1 503 581 1 80 9.53e-11 60.8
Msa0404120 AT2G46650.1 38.889 72 43 1 514 584 9 80 9.53e-11 60.8

Find 247 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGATACTAGTTCCATATT+TGG 0.181110 3_2:-34830729 None:intergenic
AAGGTCCAATCCACACTTTC+AGG 0.257380 3_2:+34830036 Msa0404120:CDS
GTAGCCCAACTTCTCCAAAT+TGG 0.257924 3_2:-34833850 None:intergenic
GCACAATGATGCCACAAATT+TGG 0.259008 3_2:+34833050 Msa0404120:CDS
GTTTGCAGTAAAGCCCAATT+TGG 0.260920 3_2:+34833836 Msa0404120:CDS
GTTGAAGTGTTGGACCTTCT+TGG 0.272234 3_2:+34832256 Msa0404120:CDS
TCATTGTGCATTGAGTTATT+TGG 0.273098 3_2:-34833036 None:intergenic
GTACTCCTCGATCATATTCT+TGG 0.279892 3_2:-34832965 None:intergenic
AGTGCTGGTGCTGGTGCTTT+TGG 0.282148 3_2:+34832224 Msa0404120:CDS
CTTAGAGGCTATGCATATTC+AGG 0.283106 3_2:+34831250 Msa0404120:CDS
TACGGGTAGAGGAAACTTTA+TGG 0.288864 3_2:+34833464 Msa0404120:CDS
GACCTGTCCCAAAAGCAAAA+TGG 0.291569 3_2:+34830396 Msa0404120:CDS
GCATTTCAGTAAGATCTTCT+TGG 0.293387 3_2:-34833584 None:intergenic
GATCGACGGTTCTAGTTCTT+TGG 0.300756 3_2:-34830210 None:intergenic
GTGGTTAAGATTTACTTAAA+AGG 0.304198 3_2:+34833336 Msa0404120:CDS
AACCATGCTGTATTAGTTCT+TGG 0.304963 3_2:-34830334 None:intergenic
CATGCCAATGCCAATGTATC+TGG 0.305460 3_2:-34833792 None:intergenic
GGCTCAACCTTGGATATAAA+AGG 0.306036 3_2:+34833420 Msa0404120:CDS
ATCTTTAAGCATTTCCTTGA+TGG 0.316220 3_2:-34833076 None:intergenic
CTCTCGTATGCGCGGGTAAC+CGG 0.316245 3_2:+34830519 Msa0404120:CDS
CAGATGCCTTACTTGCTTAG+AGG 0.329048 3_2:+34831235 Msa0404120:CDS
GGTGGTGGTGGATCCAAATA+TGG 0.361302 3_2:+34830716 Msa0404120:CDS
CAGCACTTACCGTACTTGTT+TGG 0.363656 3_2:-34832208 None:intergenic
CTTGGCTTTGTCAGAGTGAA+TGG 0.364308 3_2:-34832947 None:intergenic
GTTATAATACCTGGTTTCAT+TGG 0.364988 3_2:+34830845 Msa0404120:CDS
TTAGTTGGGCCATCGTGAAT+TGG 0.365749 3_2:-34830463 None:intergenic
CCAGGTATTATAACTCTAAC+AGG 0.366260 3_2:-34830836 None:intergenic
GAGTGGTGGCTCTGAGTTGA+AGG 0.367776 3_2:-34830312 None:intergenic
TTATTGAAATGCATGACATC+TGG 0.368060 3_2:-34830065 None:intergenic
CACTTGGATTCAATGCCTAT+TGG 0.374176 3_2:+34833399 Msa0404120:CDS
ATTAGGACACATAGAGTATA+CGG 0.375124 3_2:+34833446 Msa0404120:CDS
TGAGTTATTTGGTGACGAAT+TGG 0.382298 3_2:-34833025 None:intergenic
GCCCTCTATGTATGCTTTGA+AGG 0.384856 3_2:+34830677 Msa0404120:CDS
GTATACTCTATGTGTCCTAA+TGG 0.384901 3_2:-34833444 None:intergenic
TGGTTAAGATTTACTTAAAA+GGG 0.385717 3_2:+34833337 Msa0404120:CDS
TTAGAAGAGTAGCAAGTTGT+TGG 0.386976 3_2:-34833880 None:intergenic
AATCCAAGTGTTGAGACATT+AGG 0.391325 3_2:-34833386 None:intergenic
TTGGGACAGGTCCGTGGTTG+CGG 0.391787 3_2:-34830385 None:intergenic
CCCGCGCATACGAGAGTAAC+CGG 0.394920 3_2:-34830512 None:intergenic
TTGCCATCCAGCCACCTGAT+TGG 0.397086 3_2:-34832675 None:intergenic
TTGGATATAAAAGGCCCATT+AGG 0.398445 3_2:+34833429 Msa0404120:CDS
AGTTGGACCATCGAAGTATC+AGG 0.400907 3_2:+34830422 Msa0404120:CDS
CCTCTGATCAATGGATTAAA+CGG 0.401623 3_2:+34830255 Msa0404120:CDS
ATATCCAAGGTTGAGCCAAT+AGG 0.402843 3_2:-34833414 None:intergenic
TGAGACATTAGGCCACCATT+AGG 0.411266 3_2:-34833375 None:intergenic
GCCATGTTGGCCGGTGGAAG+TGG 0.412355 3_2:+34833519 Msa0404120:CDS
TAGCCCAACTTCTCCAAATT+GGG 0.414150 3_2:-34833849 None:intergenic
ACCTGTCCCAAAAGCAAAAT+GGG 0.415174 3_2:+34830397 Msa0404120:CDS
ATCTGGACAGGCCTTGAAAA+AGG 0.415277 3_2:+34830017 Msa0404120:CDS
TCTTTAAGCATTTCCTTGAT+GGG 0.417521 3_2:-34833075 None:intergenic
AACAAGCAGTGTAGATGAAA+AGG 0.420361 3_2:+34833299 Msa0404120:CDS
CAGCCACCTGATTGGTTCCC+TGG 0.421638 3_2:-34832667 None:intergenic
TAGTTGGGCCATCGTGAATT+GGG 0.423689 3_2:-34830462 None:intergenic
AAAGCCCAATTTGGAGAAGT+TGG 0.425141 3_2:+34833845 Msa0404120:CDS
TTGGGAAGTCGTCGATTAGT+TGG 0.425880 3_2:-34830478 None:intergenic
TTCAAACTCCTCTGTGCAAT+CGG 0.429383 3_2:-34832923 None:intergenic
GCCTTACGAAGAACAACTCT+TGG 0.431768 3_2:+34833203 Msa0404120:CDS
GGGCCATCGTGAATTGGGTC+TGG 0.442186 3_2:-34830457 None:intergenic
GATTGGTTCCCTGGTTGAGT+TGG 0.443427 3_2:-34832658 None:intergenic
ATTGGTTCCCTGGTTGAGTT+GGG 0.447773 3_2:-34832657 None:intergenic
GGCATGTGGGCCGCCACCCA+TGG 0.449681 3_2:+34833809 Msa0404120:CDS
GAGGAATGATAATTATGAAA+TGG 0.450013 3_2:-34830107 None:intergenic
CTTCCCAAGTCATGAATTCC+CGG 0.451431 3_2:+34830493 Msa0404120:CDS
AGGCCACCATTAGGGAACTT+TGG 0.454990 3_2:-34833366 None:intergenic
GTCCTTGGAGGTTGAAGTGT+TGG 0.457619 3_2:+34832246 Msa0404120:CDS
CCTGTTAGAGTTATAATACC+TGG 0.460778 3_2:+34830836 Msa0404120:CDS
CAAAAGCAAAATGGGATAGT+TGG 0.462565 3_2:+34830405 Msa0404120:CDS
ACCTCAATGCTCCGTCTGAC+AGG 0.463049 3_2:+34830281 Msa0404120:CDS
GAGGAACTGCCAGGTGGTGG+TGG 0.464030 3_2:+34830704 Msa0404120:CDS
TGGGAAGTCGTCGATTAGTT+GGG 0.469151 3_2:-34830477 None:intergenic
ACTCAACCAGGGAACCAATC+AGG 0.470711 3_2:+34832661 Msa0404120:CDS
CTTCTGTAGATAATCGCATC+TGG 0.470739 3_2:+34830000 Msa0404120:CDS
GAGACATTAGGCCACCATTA+GGG 0.471780 3_2:-34833374 None:intergenic
AAGCCCAATTTGGAGAAGTT+GGG 0.472198 3_2:+34833846 Msa0404120:CDS
TGAGTAGTGCATGAGTTGAT+AGG 0.474173 3_2:-34831214 None:intergenic
TATACTCTATGTGTCCTAAT+GGG 0.474973 3_2:-34833443 None:intergenic
TGAAATGGCAATGGCGGTTG+AGG 0.475294 3_2:-34830092 None:intergenic
CCCAAGAGTTGTTCTTCGTA+AGG 0.478627 3_2:-34833204 None:intergenic
AAAGCTAACAAGGGTGAGAT+TGG 0.479240 3_2:+34832619 Msa0404120:CDS
GCTGAGGAACTGCCAGGTGG+TGG 0.479356 3_2:+34830701 Msa0404120:CDS
TATTGAAATGCATGACATCT+GGG 0.479468 3_2:-34830064 None:intergenic
CGACGGTTCTAGTTCTTTGG+TGG 0.481088 3_2:-34830207 None:intergenic
CTGGTATCTCCACTTCAGTA+TGG 0.483918 3_2:+34830594 Msa0404120:CDS
TGAGGATGATATATTGTTGA+GGG 0.484434 3_2:+34833629 Msa0404120:CDS
AAATAAATTACCTTCAGCAT+TGG 0.485878 3_2:-34830981 None:intergenic
TCATGTTCTGTTCCTTGCGC+CGG 0.487588 3_2:-34830538 None:intergenic
TGGTTTCATTGGAGGAAGAA+TGG 0.487954 3_2:+34830856 Msa0404120:CDS
TTCAGCTTGGTGGTACAAGC+CGG 0.489830 3_2:+34831126 Msa0404120:intron
TGAGGGAAGAGATGGATTCA+TGG 0.490139 3_2:+34833646 Msa0404120:CDS
TGGTTATGAGTTCACCGATT+CGG 0.491166 3_2:-34832987 None:intergenic
TTCTCCAGATACATTGGCAT+TGG 0.492750 3_2:+34833788 Msa0404120:CDS
CGGACATAGTGGAGTGGGAC+AGG 0.493785 3_2:-34830365 None:intergenic
GCATAGCCTCTAAGCAAGTA+AGG 0.494242 3_2:-34831241 None:intergenic
GAAGGTGCTGAGGAACTGCC+AGG 0.499296 3_2:+34830695 Msa0404120:CDS
TGGTGTTATCCCACTTCCAC+CGG 0.500789 3_2:-34833529 None:intergenic
CTTTAAGCATTTCCTTGATG+GGG 0.503550 3_2:-34833074 None:intergenic
GTAGATAATCGCATCTGGAC+AGG 0.503738 3_2:+34830005 Msa0404120:CDS
AGAGGAAACTTTATGGTTCA+CGG 0.503896 3_2:+34833471 Msa0404120:CDS
CCTTACGAAGAACAACTCTT+GGG 0.505056 3_2:+34833204 Msa0404120:CDS
TTGGAGGAAGAATGGTGAAA+TGG 0.505427 3_2:+34830864 Msa0404120:CDS
ATGCTGAGACCTCTGATCAA+TGG 0.506878 3_2:+34830246 Msa0404120:CDS
GTGCATCCAAAGTTCCCTAA+TGG 0.507249 3_2:+34833360 Msa0404120:CDS
AGGATGCTATCTGCGCCACC+AGG 0.507350 3_2:-34832886 None:intergenic
CCCACTTCCACCGGCCAACA+TGG 0.507597 3_2:-34833520 None:intergenic
AATGCCTATTGGCTCAACCT+TGG 0.507755 3_2:+34833410 Msa0404120:CDS
TTCGTCTTCCTCTTCGCTTG+AGG 0.508096 3_2:-34830126 None:intergenic
GTCCGTGGTTGCGGACATAG+TGG 0.511251 3_2:-34830376 None:intergenic
CAGGGAACCAATCAGGTGGC+TGG 0.511467 3_2:+34832668 Msa0404120:CDS
GACCATCGAAGTATCAGGTC+TGG 0.511523 3_2:+34830427 Msa0404120:CDS
ATAATACCTGGTTTCATTGG+AGG 0.513190 3_2:+34830848 Msa0404120:CDS
AAGGGTGGGAATATAGTGTT+GGG 0.514208 3_2:+34833724 Msa0404120:CDS
TTCGAGCACCCAACTCAACC+AGG 0.517514 3_2:+34832649 Msa0404120:CDS
TTTGAAGCAGCATGTTCCAC+AGG 0.517593 3_2:+34833764 Msa0404120:CDS
GTTATTTGGTGACGAATTGG+AGG 0.526045 3_2:-34833022 None:intergenic
TATATTGTTGAGGGAAGAGA+TGG 0.526440 3_2:+34833638 Msa0404120:CDS
GGAAGACGAAGACGAAGAGA+AGG 0.526693 3_2:+34830139 Msa0404120:CDS
AGCTCGTACAGCAATATCCT+TGG 0.527032 3_2:-34832281 None:intergenic
CACATAGAGTATACGGGTAG+AGG 0.528882 3_2:+34833453 Msa0404120:CDS
TGGCCTAATGTCTCAACACT+TGG 0.530533 3_2:+34833383 Msa0404120:CDS
AGAAAGTAAAAGAGAAGGGT+GGG 0.534807 3_2:+34833710 Msa0404120:CDS
GAAGGGTGGGAATATAGTGT+TGG 0.537061 3_2:+34833723 Msa0404120:CDS
GATACATTGGCATTGGCATG+TGG 0.537103 3_2:+34833795 Msa0404120:CDS
AGTGGTGGCTCTGAGTTGAA+GGG 0.539276 3_2:-34830311 None:intergenic
AGTCAATCTCTCACGACGTT+AGG 0.539354 3_2:+34833163 Msa0404120:CDS
TCTAACAGGAAAACCATGAT+CGG 0.539755 3_2:-34830822 None:intergenic
AGCTCGTTTATAATATACTC+CGG 0.542425 3_2:-34831145 None:intergenic
AAGTTTATGCAAAGCTAACA+AGG 0.542873 3_2:+34832609 Msa0404120:CDS
GACCAGACCTGATACTTCGA+TGG 0.547387 3_2:-34830429 None:intergenic
AAGAATATGTGCTTCCCCAC+GGG 0.551238 3_2:-34833231 None:intergenic
TATCACAAGAGAGGTTGCAT+TGG 0.551398 3_2:+34830745 Msa0404120:CDS
GGACGGTGGTGAAACGTGGC+AGG 0.552550 3_2:+34832159 Msa0404120:CDS
ATTGGAGGAGTGACTGCCAC+TGG 0.554442 3_2:-34833007 None:intergenic
GTGCAAGAAAGTAAAAGAGA+AGG 0.554988 3_2:+34833705 Msa0404120:CDS
GCAAACTGAACCATGGGTGG+CGG 0.556169 3_2:-34833819 None:intergenic
AACATGATAAAACAAAGCAT+TGG 0.557007 3_2:+34830554 Msa0404120:CDS
ATTCTTGCGTATATGCAAAA+CGG 0.557526 3_2:+34830785 Msa0404120:CDS
TTTGCTTTGATTTCATAATG+AGG 0.558760 3_2:-34830184 None:intergenic
AAGAGACTAGCCATGTTGGC+CGG 0.559221 3_2:+34833510 Msa0404120:CDS
GTTGGACCTTCTTGGAGCCA+AGG 0.561436 3_2:+34832264 Msa0404120:CDS
ACAGGCTTCTCCAGATACAT+TGG 0.563333 3_2:+34833782 Msa0404120:CDS
AAAGGGACACTTTGATCTAG+TGG 0.565014 3_2:+34833317 Msa0404120:CDS
CTAACAGGAAAACCATGATC+GGG 0.565234 3_2:-34830821 None:intergenic
GAGGGAAGAGATGGATTCAT+GGG 0.565931 3_2:+34833647 Msa0404120:CDS
TGCAAGAAAGTAAAAGAGAA+GGG 0.567945 3_2:+34833706 Msa0404120:CDS
ACAAGCAGTGTAGATGAAAA+GGG 0.568827 3_2:+34833300 Msa0404120:CDS
TGATAGGCAGTATTTCATCA+TGG 0.570107 3_2:-34831198 None:intergenic
AGCTCAGCATCAACATGTGA+AGG 0.571981 3_2:-34830956 None:intergenic
AGGGGTGTTTGCCTGTCAGA+CGG 0.572778 3_2:-34830292 None:intergenic
AGGGCATGATGAATAACTGC+TGG 0.573140 3_2:+34832572 Msa0404120:intron
GTGAAGAGAGACTCTTCTTG+AGG 0.574001 3_2:-34832738 None:intergenic
CCGTTTAATCCATTGATCAG+AGG 0.574218 3_2:-34830255 None:intergenic
TTTACTGCAAACTGAACCAT+GGG 0.575519 3_2:-34833825 None:intergenic
CTCCACTATGTCCGCAACCA+CGG 0.575594 3_2:+34830374 Msa0404120:CDS
ATGATCGAGGAGTACCGAAT+CGG 0.576600 3_2:+34832973 Msa0404120:CDS
GAACCAATCAGGTGGCTGGA+TGG 0.577139 3_2:+34832672 Msa0404120:CDS
GTGAGGATGATATATTGTTG+AGG 0.579219 3_2:+34833628 Msa0404120:CDS
TAAGAATATGTGCTTCCCCA+CGG 0.579422 3_2:-34833232 None:intergenic
CCATGTTGGCCGGTGGAAGT+GGG 0.580640 3_2:+34833520 Msa0404120:CDS
CAATATCCTTGGCTCCAAGA+AGG 0.581104 3_2:-34832270 None:intergenic
CCCGGTTACTCTCGTATGCG+CGG 0.581597 3_2:+34830511 Msa0404120:CDS
ATAATAACGCTGAATCCGCA+TGG 0.582575 3_2:+34832812 Msa0404120:CDS
CACCTTCAAAGCATACATAG+AGG 0.582946 3_2:-34830679 None:intergenic
TGCGAAGAGACTAGCCATGT+TGG 0.586335 3_2:+34833506 Msa0404120:CDS
TGTATTAGTTCTTGGAGTGG+TGG 0.586621 3_2:-34830326 None:intergenic
GTGGTGGCTCTGAGTTGAAG+GGG 0.587647 3_2:-34830310 None:intergenic
AAGAAAGTAAAAGAGAAGGG+TGG 0.588267 3_2:+34833709 Msa0404120:CDS
TGCAGTCGTAGACATGGCCA+TGG 0.588719 3_2:-34832843 None:intergenic
GATGGCAAAAGAAAGACAGT+TGG 0.590252 3_2:+34832690 Msa0404120:CDS
TATACGCAAGAATGATATCA+CGG 0.592584 3_2:-34830775 None:intergenic
GTTGACCTGAAAGTGTGGAT+TGG 0.593565 3_2:-34830041 None:intergenic
CAAACAAGTACGGTAAGTGC+TGG 0.594016 3_2:+34832209 Msa0404120:CDS
AGCATGAACGATTCAAAGTG+TGG 0.596379 3_2:+34833676 Msa0404120:CDS
CCGGTTACTCTCGTATGCGC+GGG 0.597008 3_2:+34830512 Msa0404120:CDS
GGTTAAGATTTACTTAAAAG+GGG 0.597586 3_2:+34833338 Msa0404120:CDS
TGCTGTATTAGTTCTTGGAG+TGG 0.598391 3_2:-34830329 None:intergenic
TTTAAGCATTTCCTTGATGG+GGG 0.600049 3_2:-34833073 None:intergenic
AGCGAGTGCAGTCGTAGACA+TGG 0.602702 3_2:-34832849 None:intergenic
TTTGAGCTAGTGATCATGAA+GGG 0.603367 3_2:-34832760 None:intergenic
TATTTGGATCCACCACCACC+TGG 0.604194 3_2:-34830713 None:intergenic
GCTGAGCTTGCCAATGCTGA+AGG 0.604777 3_2:+34830971 Msa0404120:CDS
TGCACGGTGCTCGAGCGTTG+TGG 0.605847 3_2:+34830632 Msa0404120:CDS
GTCCAACACTTCAACCTCCA+AGG 0.608142 3_2:-34832248 None:intergenic
GGTTGCGGACATAGTGGAGT+GGG 0.608478 3_2:-34830370 None:intergenic
TGATAATTATGAAATGGCAA+TGG 0.610170 3_2:-34830101 None:intergenic
CTTTACTGCAAACTGAACCA+TGG 0.612485 3_2:-34833826 None:intergenic
CGTGTTGAAGTTACAATGGA+CGG 0.614000 3_2:+34832142 Msa0404120:CDS
CATCCAAAGTTCCCTAATGG+TGG 0.615460 3_2:+34833363 Msa0404120:CDS
TCCGCATGGATCATAGTCCA+TGG 0.616467 3_2:+34832826 Msa0404120:CDS
ACTGCAAACTGAACCATGGG+TGG 0.616904 3_2:-34833822 None:intergenic
AGACTAGCCATGTTGGCCGG+TGG 0.619772 3_2:+34833513 Msa0404120:CDS
GGCAGTATTTCATCATGGCA+CGG 0.621675 3_2:-34831193 None:intergenic
GTAACCGGGAATTCATGACT+TGG 0.622176 3_2:-34830497 None:intergenic
CAACTCTTGGGATTACCCGT+GGG 0.623693 3_2:+34833216 Msa0404120:CDS
CATAGAGGGCACCACTGTTG+CGG 0.624425 3_2:-34830664 None:intergenic
AATCGGTGCCAGCGTTGATG+AGG 0.625253 3_2:-34832906 None:intergenic
TAACCGGGAATTCATGACTT+GGG 0.625347 3_2:-34830496 None:intergenic
ATACGCAAGAATGATATCAC+GGG 0.627395 3_2:-34830774 None:intergenic
ACAACTCTTGGGATTACCCG+TGG 0.627455 3_2:+34833215 Msa0404120:CDS
ATCTCCACTTCAGTATGGCG+CGG 0.628763 3_2:+34830599 Msa0404120:CDS
ATACATTGGCATTGGCATGT+GGG 0.630116 3_2:+34833796 Msa0404120:CDS
ACCTTCAAAGCATACATAGA+GGG 0.630691 3_2:-34830678 None:intergenic
GCCTGTCAGACGGAGCATTG+AGG 0.631535 3_2:-34830282 None:intergenic
TTAGGACACATAGAGTATAC+GGG 0.634306 3_2:+34833447 Msa0404120:CDS
TTTAAAGAGAAGCTTGCATG+AGG 0.635331 3_2:-34833139 None:intergenic
ATGCGCGGGTAACCGGCGCA+AGG 0.636752 3_2:+34830526 Msa0404120:CDS
CGCTCGAGCACCGTGCACAA+TGG 0.637337 3_2:-34830626 None:intergenic
GACACGTGTTGAAGTTACAA+TGG 0.638170 3_2:+34832138 Msa0404120:CDS
TGGTTGCGGACATAGTGGAG+TGG 0.638181 3_2:-34830371 None:intergenic
TTATCATTCCTCAAGCGAAG+AGG 0.639141 3_2:+34830118 Msa0404120:CDS
TCAGAGGTCTCAGCATCGCG+TGG 0.640230 3_2:-34830239 None:intergenic
CTGGGGTTGACCTGAAAGTG+TGG 0.640750 3_2:-34830046 None:intergenic
CGCTTCATCAAAGATCACCC+TGG 0.641690 3_2:+34832868 Msa0404120:CDS
AGTACGGTAAGTGCTGGTGC+TGG 0.643006 3_2:+34832215 Msa0404120:CDS
AACGTGGCAGGTATGCACAT+TGG 0.644196 3_2:+34832171 Msa0404120:CDS
CAATGGACGGTGGTGAAACG+TGG 0.644887 3_2:+34832155 Msa0404120:CDS
GATAGCATCCTCATCAACGC+TGG 0.646089 3_2:+34832898 Msa0404120:CDS
TACACCGCGCCATACTGAAG+TGG 0.648118 3_2:-34830603 None:intergenic
CTCCAAGAACTAATACAGCA+TGG 0.654282 3_2:+34830332 Msa0404120:CDS
TGGAACTAGTATCACAAGAG+AGG 0.656192 3_2:+34830736 Msa0404120:CDS
CCGCGCATACGAGAGTAACC+GGG 0.665188 3_2:-34830511 None:intergenic
ATCGGTGAACTCATAACCAG+TGG 0.667904 3_2:+34832991 Msa0404120:CDS
GTTTAAAGCTACACTACACA+AGG 0.671262 3_2:-34833103 None:intergenic
TCGCGTGGATCAAAGATCGA+CGG 0.671655 3_2:-34830224 None:intergenic
ATTCTTCCTCCAATGAAACC+AGG 0.676865 3_2:-34830854 None:intergenic
GCGCGGTGTACCATTGTGCA+CGG 0.679472 3_2:+34830616 Msa0404120:CDS
TGTATGCTTTGAAGGTGCTG+AGG 0.679891 3_2:+34830685 Msa0404120:CDS
ACGATTCAAAGTGTGGTATG+TGG 0.682116 3_2:+34833683 Msa0404120:CDS
AACTCTTGGGATTACCCGTG+GGG 0.684011 3_2:+34833217 Msa0404120:CDS
ATTGAAATGCATGACATCTG+GGG 0.687805 3_2:-34830063 None:intergenic
GCAAGAATGATATCACGGGA+AGG 0.692303 3_2:-34830770 None:intergenic
CAACCAGGGAACCAATCAGG+TGG 0.696488 3_2:+34832664 Msa0404120:CDS
CAAAGCCAAGAATATGATCG+AGG 0.697214 3_2:+34832960 Msa0404120:CDS
TCGAGCACCCAACTCAACCA+GGG 0.697541 3_2:+34832650 Msa0404120:CDS
TTCATCAAAGATCACCCTGG+TGG 0.702223 3_2:+34832871 Msa0404120:CDS
GGAATCTTGAACCGCAACAG+TGG 0.704457 3_2:+34830653 Msa0404120:CDS
GATAACACCAATTTACCAAG+TGG 0.704475 3_2:+34833542 Msa0404120:CDS
AATGTATCTGGAGAAGCCTG+TGG 0.705001 3_2:-34833780 None:intergenic
AGTTTATGCAAAGCTAACAA+GGG 0.705423 3_2:+34832610 Msa0404120:CDS
CGCTGGCACCGATTGCACAG+AGG 0.718427 3_2:+34832915 Msa0404120:CDS
TAATTATGAAATGGCAATGG+CGG 0.722085 3_2:-34830098 None:intergenic
AAACCAGACCCAATTCACGA+TGG 0.730530 3_2:+34830454 Msa0404120:CDS
GGATGCTATCTGCGCCACCA+GGG 0.732861 3_2:-34832885 None:intergenic
TGTGTATGCTAATCGAAGTG+AGG 0.737389 3_2:+34833611 Msa0404120:CDS
TTTAAAGCTACACTACACAA+GGG 0.752117 3_2:-34833102 None:intergenic
GCCATGGACTATGATCCATG+CGG 0.753639 3_2:-34832827 None:intergenic
GGTGCTGAGGAACTGCCAGG+TGG 0.782571 3_2:+34830698 Msa0404120:CDS
GTTGAAGTTACAATGGACGG+TGG 0.807701 3_2:+34832145 Msa0404120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGATTTTGATTAAAAGTT+AGG - chr3_2:34831372-34831391 None:intergenic 15.0%
!!! TTAATTTTAAATTGTAGACA+GGG - chr3_2:34831535-34831554 None:intergenic 15.0%
!!! ATTAATTTTAAATTGTAGAC+AGG - chr3_2:34831536-34831555 None:intergenic 15.0%
!! ATACTATTCTAGTATATATA+TGG + chr3_2:34831554-34831573 Msa0404120:intron 15.0%
!! TACTATTCTAGTATATATAT+GGG + chr3_2:34831555-34831574 Msa0404120:intron 15.0%
!!! ACTCAATTTTCATAATATAT+AGG + chr3_2:34832471-34832490 Msa0404120:intron 15.0%
!!! TAATTTATTTTGGTTTAGAC+CGG + chr3_2:34830994-34831013 Msa0404120:intron 20.0%
!!! TGTAATTTTATTTTTCAGCT+TGG + chr3_2:34831113-34831132 Msa0404120:intron 20.0%
!!! TAATGTTTCATAATCACTTT+TGG + chr3_2:34831427-34831446 Msa0404120:intron 20.0%
!!! TAGACACAGATTTAAATTTT+GGG - chr3_2:34831456-34831475 None:intergenic 20.0%
!!! TTAGACACAGATTTAAATTT+TGG - chr3_2:34831457-34831476 None:intergenic 20.0%
!! TTAAAAATAATTGTCCACTT+CGG - chr3_2:34831491-34831510 None:intergenic 20.0%
!!! ACAATTATTTTTAAAGAGGA+TGG + chr3_2:34831497-34831516 Msa0404120:intron 20.0%
!! ATACATAGTTGAGTAAAAAA+AGG - chr3_2:34831797-34831816 None:intergenic 20.0%
!! TCAACAAAAGTTAATGTATT+TGG + chr3_2:34832425-34832444 Msa0404120:intron 20.0%
!!! ATGTTTTTTTACTTCAGAAA+CGG - chr3_2:34832794-34832813 None:intergenic 20.0%
!! TGGTTAAGATTTACTTAAAA+GGG + chr3_2:34833337-34833356 Msa0404120:CDS 20.0%
! TGATAATTATGAAATGGCAA+TGG - chr3_2:34830104-34830123 None:intergenic 25.0%
! GAGGAATGATAATTATGAAA+TGG - chr3_2:34830110-34830129 None:intergenic 25.0%
!! TTTGCTTTGATTTCATAATG+AGG - chr3_2:34830187-34830206 None:intergenic 25.0%
! AACATGATAAAACAAAGCAT+TGG + chr3_2:34830554-34830573 Msa0404120:CDS 25.0%
! AAATAAATTACCTTCAGCAT+TGG - chr3_2:34830984-34831003 None:intergenic 25.0%
!! ATGCTGAAGGTAATTTATTT+TGG + chr3_2:34830984-34831003 Msa0404120:intron 25.0%
!!! AATTTTATTTTTCAGCTTGG+TGG + chr3_2:34831116-34831135 Msa0404120:intron 25.0%
!! AGACACAGATTTAAATTTTG+GGG - chr3_2:34831455-34831474 None:intergenic 25.0%
!!! GTGGACAATTATTTTTAAAG+AGG + chr3_2:34831493-34831512 Msa0404120:intron 25.0%
! GATTCAAATTGGAACTTAAT+TGG + chr3_2:34831889-34831908 Msa0404120:intron 25.0%
! AACTCTAATATATCACAGTT+CGG - chr3_2:34831961-34831980 None:intergenic 25.0%
! ATATAACGTGAAACAAAACT+TGG + chr3_2:34831984-34832003 Msa0404120:intron 25.0%
! CTCAAAATCAAATACATGTA+GGG - chr3_2:34832054-34832073 None:intergenic 25.0%
! ACTCAAAATCAAATACATGT+AGG - chr3_2:34832055-34832074 None:intergenic 25.0%
! AGTACTAAGTTATAAGGTTT+GGG - chr3_2:34832372-34832391 None:intergenic 25.0%
! TAGTACTAAGTTATAAGGTT+TGG - chr3_2:34832373-34832392 None:intergenic 25.0%
! TTTCATAATATATAGGACTG+AGG + chr3_2:34832478-34832497 Msa0404120:intron 25.0%
! TTCATAATATATAGGACTGA+GGG + chr3_2:34832479-34832498 Msa0404120:intron 25.0%
!! TTTTACTATGCATTTGTTCA+GGG + chr3_2:34832553-34832572 Msa0404120:intron 25.0%
! GTGGTTAAGATTTACTTAAA+AGG + chr3_2:34833336-34833355 Msa0404120:CDS 25.0%
! GGTTAAGATTTACTTAAAAG+GGG + chr3_2:34833338-34833357 Msa0404120:CDS 25.0%
TATTGAAATGCATGACATCT+GGG - chr3_2:34830067-34830086 None:intergenic 30.0%
TTATTGAAATGCATGACATC+TGG - chr3_2:34830068-34830087 None:intergenic 30.0%
TAATTATGAAATGGCAATGG+CGG - chr3_2:34830101-34830120 None:intergenic 30.0%
!! AACTATCCCATTTTGCTTTT+GGG - chr3_2:34830406-34830425 None:intergenic 30.0%
!!! AACAAAGCATTGGTTTTAAC+TGG + chr3_2:34830564-34830583 Msa0404120:CDS 30.0%
!!! ACAAAGCATTGGTTTTAACT+GGG + chr3_2:34830565-34830584 Msa0404120:CDS 30.0%
TGTGATACTAGTTCCATATT+TGG - chr3_2:34830732-34830751 None:intergenic 30.0%
TATACGCAAGAATGATATCA+CGG - chr3_2:34830778-34830797 None:intergenic 30.0%
ATTCTTGCGTATATGCAAAA+CGG + chr3_2:34830785-34830804 Msa0404120:CDS 30.0%
GTTATAATACCTGGTTTCAT+TGG + chr3_2:34830845-34830864 Msa0404120:CDS 30.0%
ACAAAGACGTTGATATGTAT+AGG - chr3_2:34831021-34831040 None:intergenic 30.0%
ATACATATCAACGTCTTTGT+AGG + chr3_2:34831021-34831040 Msa0404120:intron 30.0%
AGCTCGTTTATAATATACTC+CGG - chr3_2:34831148-34831167 None:intergenic 30.0%
TTGTTTGTTCCCAAAGATTA+AGG + chr3_2:34831317-34831336 Msa0404120:intron 30.0%
TGTTTGTTCCCAAAGATTAA+GGG + chr3_2:34831318-34831337 Msa0404120:intron 30.0%
TAAACACACCCTTAATCTTT+GGG - chr3_2:34831329-34831348 None:intergenic 30.0%
! TAATTTCAACTTTTCCGAAG+TGG + chr3_2:34831474-34831493 Msa0404120:intron 30.0%
TGTGACCAAACTAAATTTCT+TGG - chr3_2:34831616-34831635 None:intergenic 30.0%
TGTGACCAAAGAAAATTTCT+TGG + chr3_2:34831727-34831746 Msa0404120:intron 30.0%
AACAAAGTGGAGAAATTCTT+GGG - chr3_2:34831763-34831782 None:intergenic 30.0%
TAACAAAGTGGAGAAATTCT+TGG - chr3_2:34831764-34831783 None:intergenic 30.0%
!! GGGAAAGTATTGATATGTTA+TGG + chr3_2:34831861-34831880 Msa0404120:intron 30.0%
TTATGGTTGCAGATTCAAAT+TGG + chr3_2:34831878-34831897 Msa0404120:intron 30.0%
TGCACAATCATCAATAATTG+AGG - chr3_2:34832101-34832120 None:intergenic 30.0%
! TCAATTATTGATGATTGTGC+AGG + chr3_2:34832100-34832119 Msa0404120:intron 30.0%
! CAATTATTGATGATTGTGCA+GGG + chr3_2:34832101-34832120 Msa0404120:intron 30.0%
! AATTATTGATGATTGTGCAG+GGG + chr3_2:34832102-34832121 Msa0404120:intron 30.0%
!!! ACTTGTTTGGTTTTTCTGAA+TGG - chr3_2:34832198-34832217 None:intergenic 30.0%
TCAGAAAAACCAAACAAGTA+CGG + chr3_2:34832199-34832218 Msa0404120:CDS 30.0%
GTACTAAGTTATAAGGTTTG+GGG - chr3_2:34832371-34832390 None:intergenic 30.0%
AGAGCTAGTACTAAGTTATA+AGG - chr3_2:34832378-34832397 None:intergenic 30.0%
TTATAACTTAGTACTAGCTC+TGG + chr3_2:34832377-34832396 Msa0404120:intron 30.0%
! CTTTTACTATGCATTTGTTC+AGG + chr3_2:34832552-34832571 Msa0404120:intron 30.0%
AAGTTTATGCAAAGCTAACA+AGG + chr3_2:34832609-34832628 Msa0404120:CDS 30.0%
AGTTTATGCAAAGCTAACAA+GGG + chr3_2:34832610-34832629 Msa0404120:CDS 30.0%
TCATTGTGCATTGAGTTATT+TGG - chr3_2:34833039-34833058 None:intergenic 30.0%
TCTTTAAGCATTTCCTTGAT+GGG - chr3_2:34833078-34833097 None:intergenic 30.0%
ATCTTTAAGCATTTCCTTGA+TGG - chr3_2:34833079-34833098 None:intergenic 30.0%
! TTTAAAGCTACACTACACAA+GGG - chr3_2:34833105-34833124 None:intergenic 30.0%
TATACTCTATGTGTCCTAAT+GGG - chr3_2:34833446-34833465 None:intergenic 30.0%
ATTAGGACACATAGAGTATA+CGG + chr3_2:34833446-34833465 Msa0404120:CDS 30.0%
TGAGGATGATATATTGTTGA+GGG + chr3_2:34833629-34833648 Msa0404120:CDS 30.0%
TGCAAGAAAGTAAAAGAGAA+GGG + chr3_2:34833706-34833725 Msa0404120:CDS 30.0%
ATTGAAATGCATGACATCTG+GGG - chr3_2:34830066-34830085 None:intergenic 35.0%
!! CCTCTGATCAATGGATTAAA+CGG + chr3_2:34830255-34830274 Msa0404120:CDS 35.0%
! AACCATGCTGTATTAGTTCT+TGG - chr3_2:34830337-34830356 None:intergenic 35.0%
! CAACTATCCCATTTTGCTTT+TGG - chr3_2:34830407-34830426 None:intergenic 35.0%
CAAAAGCAAAATGGGATAGT+TGG + chr3_2:34830405-34830424 Msa0404120:CDS 35.0%
!!! CAAAGCATTGGTTTTAACTG+GGG + chr3_2:34830566-34830585 Msa0404120:CDS 35.0%
ACCTTCAAAGCATACATAGA+GGG - chr3_2:34830681-34830700 None:intergenic 35.0%
ATACGCAAGAATGATATCAC+GGG - chr3_2:34830777-34830796 None:intergenic 35.0%
TCTAACAGGAAAACCATGAT+CGG - chr3_2:34830825-34830844 None:intergenic 35.0%
CCAGGTATTATAACTCTAAC+AGG - chr3_2:34830839-34830858 None:intergenic 35.0%
CCTGTTAGAGTTATAATACC+TGG + chr3_2:34830836-34830855 Msa0404120:CDS 35.0%
ATAATACCTGGTTTCATTGG+AGG + chr3_2:34830848-34830867 Msa0404120:CDS 35.0%
TGATAGGCAGTATTTCATCA+TGG - chr3_2:34831201-34831220 None:intergenic 35.0%
CTATTGCAAGTTGCAACTAA+AGG + chr3_2:34831284-34831303 Msa0404120:intron 35.0%
CTAAACACACCCTTAATCTT+TGG - chr3_2:34831330-34831349 None:intergenic 35.0%
CAAACTAAATTTCTTGGTCC+TGG - chr3_2:34831610-34831629 None:intergenic 35.0%
CAGGACCAAGAAATTTAGTT+TGG + chr3_2:34831608-34831627 Msa0404120:intron 35.0%
TATTTGTGAAGAGAGAGAGA+AGG - chr3_2:34831652-34831671 None:intergenic 35.0%
AAGAGAGAAGAGAGAGAAAA+TGG - chr3_2:34831687-34831706 None:intergenic 35.0%
TCTTCTCTCTCTTCTTTCTT+TGG + chr3_2:34831703-34831722 Msa0404120:intron 35.0%
! CAGGACCAAGAAATTTTCTT+TGG - chr3_2:34831735-34831754 None:intergenic 35.0%
CAAAGAAAATTTCTTGGTCC+TGG + chr3_2:34831733-34831752 Msa0404120:intron 35.0%
! ATTATTGATGATTGTGCAGG+GGG + chr3_2:34832103-34832122 Msa0404120:intron 35.0%
TTACCATCAGATTCCAAATG+AGG - chr3_2:34832339-34832358 None:intergenic 35.0%
TTTGAGCTAGTGATCATGAA+GGG - chr3_2:34832763-34832782 None:intergenic 35.0%
! TTTTGAGCTAGTGATCATGA+AGG - chr3_2:34832764-34832783 None:intergenic 35.0%
! TTTTACTTCAGAAACGGTGT+AGG - chr3_2:34832788-34832807 None:intergenic 35.0%
!! TGAGTTATTTGGTGACGAAT+TGG - chr3_2:34833028-34833047 None:intergenic 35.0%
TTTAAGCATTTCCTTGATGG+GGG - chr3_2:34833076-34833095 None:intergenic 35.0%
CTTTAAGCATTTCCTTGATG+GGG - chr3_2:34833077-34833096 None:intergenic 35.0%
! GTTTAAAGCTACACTACACA+AGG - chr3_2:34833106-34833125 None:intergenic 35.0%
TTTAAAGAGAAGCTTGCATG+AGG - chr3_2:34833142-34833161 None:intergenic 35.0%
! TTTTCATCTACACTGCTTGT+TGG - chr3_2:34833300-34833319 None:intergenic 35.0%
AACAAGCAGTGTAGATGAAA+AGG + chr3_2:34833299-34833318 Msa0404120:CDS 35.0%
ACAAGCAGTGTAGATGAAAA+GGG + chr3_2:34833300-34833319 Msa0404120:CDS 35.0%
!! AATCCAAGTGTTGAGACATT+AGG - chr3_2:34833389-34833408 None:intergenic 35.0%
!! TAATGGGCCTTTTATATCCA+AGG - chr3_2:34833430-34833449 None:intergenic 35.0%
TTGGATATAAAAGGCCCATT+AGG + chr3_2:34833429-34833448 Msa0404120:CDS 35.0%
GTATACTCTATGTGTCCTAA+TGG - chr3_2:34833447-34833466 None:intergenic 35.0%
TTAGGACACATAGAGTATAC+GGG + chr3_2:34833447-34833466 Msa0404120:CDS 35.0%
AGAGGAAACTTTATGGTTCA+CGG + chr3_2:34833471-34833490 Msa0404120:CDS 35.0%
GATAACACCAATTTACCAAG+TGG + chr3_2:34833542-34833561 Msa0404120:CDS 35.0%
GCATTTCAGTAAGATCTTCT+TGG - chr3_2:34833587-34833606 None:intergenic 35.0%
GTGAGGATGATATATTGTTG+AGG + chr3_2:34833628-34833647 Msa0404120:CDS 35.0%
TATATTGTTGAGGGAAGAGA+TGG + chr3_2:34833638-34833657 Msa0404120:CDS 35.0%
GTGCAAGAAAGTAAAAGAGA+AGG + chr3_2:34833705-34833724 Msa0404120:CDS 35.0%
AAGAAAGTAAAAGAGAAGGG+TGG + chr3_2:34833709-34833728 Msa0404120:CDS 35.0%
AGAAAGTAAAAGAGAAGGGT+GGG + chr3_2:34833710-34833729 Msa0404120:CDS 35.0%
TTTACTGCAAACTGAACCAT+GGG - chr3_2:34833828-34833847 None:intergenic 35.0%
TTAGAAGAGTAGCAAGTTGT+TGG - chr3_2:34833883-34833902 None:intergenic 35.0%
CTTCTGTAGATAATCGCATC+TGG + chr3_2:34830000-34830019 Msa0404120:CDS 40.0%
!!! TGTGGATTGGACCTTTTTCA+AGG - chr3_2:34830031-34830050 None:intergenic 40.0%
TTATCATTCCTCAAGCGAAG+AGG + chr3_2:34830118-34830137 Msa0404120:CDS 40.0%
CCGTTTAATCCATTGATCAG+AGG - chr3_2:34830258-34830277 None:intergenic 40.0%
! TGTATTAGTTCTTGGAGTGG+TGG - chr3_2:34830329-34830348 None:intergenic 40.0%
! TGCTGTATTAGTTCTTGGAG+TGG - chr3_2:34830332-34830351 None:intergenic 40.0%
CTCCAAGAACTAATACAGCA+TGG + chr3_2:34830332-34830351 Msa0404120:CDS 40.0%
ACCTGTCCCAAAAGCAAAAT+GGG + chr3_2:34830397-34830416 Msa0404120:CDS 40.0%
TAACCGGGAATTCATGACTT+GGG - chr3_2:34830499-34830518 None:intergenic 40.0%
CACCTTCAAAGCATACATAG+AGG - chr3_2:34830682-34830701 None:intergenic 40.0%
TGGAACTAGTATCACAAGAG+AGG + chr3_2:34830736-34830755 Msa0404120:CDS 40.0%
TATCACAAGAGAGGTTGCAT+TGG + chr3_2:34830745-34830764 Msa0404120:CDS 40.0%
CTAACAGGAAAACCATGATC+GGG - chr3_2:34830824-34830843 None:intergenic 40.0%
ATTCTTCCTCCAATGAAACC+AGG - chr3_2:34830857-34830876 None:intergenic 40.0%
TGGTTTCATTGGAGGAAGAA+TGG + chr3_2:34830856-34830875 Msa0404120:CDS 40.0%
TTGGAGGAAGAATGGTGAAA+TGG + chr3_2:34830864-34830883 Msa0404120:CDS 40.0%
GACGTTGATATGTATAGGTC+CGG - chr3_2:34831016-34831035 None:intergenic 40.0%
!! TGAGTAGTGCATGAGTTGAT+AGG - chr3_2:34831217-34831236 None:intergenic 40.0%
CTTAGAGGCTATGCATATTC+AGG + chr3_2:34831250-34831269 Msa0404120:CDS 40.0%
AAAGTGGAGAAATTCTTGGG+TGG - chr3_2:34831760-34831779 None:intergenic 40.0%
GGACATAGTTGCTAACAAAG+TGG - chr3_2:34831776-34831795 None:intergenic 40.0%
ACAACCAGCAGTATCTGAAA+GGG + chr3_2:34831841-34831860 Msa0404120:intron 40.0%
GGACTATACAATCTTGCAAG+TGG - chr3_2:34832033-34832052 None:intergenic 40.0%
GACACGTGTTGAAGTTACAA+TGG + chr3_2:34832138-34832157 Msa0404120:CDS 40.0%
CGTGTTGAAGTTACAATGGA+CGG + chr3_2:34832142-34832161 Msa0404120:CDS 40.0%
AGATTCCAAATGAGGTTCTC+GGG - chr3_2:34832331-34832350 None:intergenic 40.0%
CAGATTCCAAATGAGGTTCT+CGG - chr3_2:34832332-34832351 None:intergenic 40.0%
! GAACCTCATTTGGAATCTGA+TGG + chr3_2:34832333-34832352 Msa0404120:intron 40.0%
AAAGCTAACAAGGGTGAGAT+TGG + chr3_2:34832619-34832638 Msa0404120:CDS 40.0%
GATGGCAAAAGAAAGACAGT+TGG + chr3_2:34832690-34832709 Msa0404120:CDS 40.0%
ATAATAACGCTGAATCCGCA+TGG + chr3_2:34832812-34832831 Msa0404120:CDS 40.0%
TTCAAACTCCTCTGTGCAAT+CGG - chr3_2:34832926-34832945 None:intergenic 40.0%
CAAAGCCAAGAATATGATCG+AGG + chr3_2:34832960-34832979 Msa0404120:CDS 40.0%
GTACTCCTCGATCATATTCT+TGG - chr3_2:34832968-34832987 None:intergenic 40.0%
! TGGTTATGAGTTCACCGATT+CGG - chr3_2:34832990-34833009 None:intergenic 40.0%
!! GTTATTTGGTGACGAATTGG+AGG - chr3_2:34833025-34833044 None:intergenic 40.0%
GCACAATGATGCCACAAATT+TGG + chr3_2:34833050-34833069 Msa0404120:CDS 40.0%
CCTTACGAAGAACAACTCTT+GGG + chr3_2:34833204-34833223 Msa0404120:CDS 40.0%
TAAGAATATGTGCTTCCCCA+CGG - chr3_2:34833235-34833254 None:intergenic 40.0%
AAAGGGACACTTTGATCTAG+TGG + chr3_2:34833317-34833336 Msa0404120:CDS 40.0%
CACTTGGATTCAATGCCTAT+TGG + chr3_2:34833399-34833418 Msa0404120:CDS 40.0%
ATATCCAAGGTTGAGCCAAT+AGG - chr3_2:34833417-34833436 None:intergenic 40.0%
GGCTCAACCTTGGATATAAA+AGG + chr3_2:34833420-34833439 Msa0404120:CDS 40.0%
TACGGGTAGAGGAAACTTTA+TGG + chr3_2:34833464-34833483 Msa0404120:CDS 40.0%
!! GCTTTTGCCACTTGGTAAAT+TGG - chr3_2:34833552-34833571 None:intergenic 40.0%
!! TTAGAATCGCTTTTGCCACT+TGG - chr3_2:34833560-34833579 None:intergenic 40.0%
TGTGTATGCTAATCGAAGTG+AGG + chr3_2:34833611-34833630 Msa0404120:CDS 40.0%
AGCATGAACGATTCAAAGTG+TGG + chr3_2:34833676-34833695 Msa0404120:CDS 40.0%
ACGATTCAAAGTGTGGTATG+TGG + chr3_2:34833683-34833702 Msa0404120:CDS 40.0%
AAGGGTGGGAATATAGTGTT+GGG + chr3_2:34833724-34833743 Msa0404120:CDS 40.0%
TTCTCCAGATACATTGGCAT+TGG + chr3_2:34833788-34833807 Msa0404120:CDS 40.0%
!! ATACATTGGCATTGGCATGT+GGG + chr3_2:34833796-34833815 Msa0404120:CDS 40.0%
CTTTACTGCAAACTGAACCA+TGG - chr3_2:34833829-34833848 None:intergenic 40.0%
GTTTGCAGTAAAGCCCAATT+TGG + chr3_2:34833836-34833855 Msa0404120:CDS 40.0%
AAAGCCCAATTTGGAGAAGT+TGG + chr3_2:34833845-34833864 Msa0404120:CDS 40.0%
AAGCCCAATTTGGAGAAGTT+GGG + chr3_2:34833846-34833865 Msa0404120:CDS 40.0%
TAGCCCAACTTCTCCAAATT+GGG - chr3_2:34833852-34833871 None:intergenic 40.0%
GTAGATAATCGCATCTGGAC+AGG + chr3_2:34830005-34830024 Msa0404120:CDS 45.0%
ATCTGGACAGGCCTTGAAAA+AGG + chr3_2:34830017-34830036 Msa0404120:CDS 45.0%
AAGGTCCAATCCACACTTTC+AGG + chr3_2:34830036-34830055 Msa0404120:CDS 45.0%
! GTTGACCTGAAAGTGTGGAT+TGG - chr3_2:34830044-34830063 None:intergenic 45.0%
!! GATCGACGGTTCTAGTTCTT+TGG - chr3_2:34830213-34830232 None:intergenic 45.0%
ATGCTGAGACCTCTGATCAA+TGG + chr3_2:34830246-34830265 Msa0404120:CDS 45.0%
GACCTGTCCCAAAAGCAAAA+TGG + chr3_2:34830396-34830415 Msa0404120:CDS 45.0%
!!! TCCCATTTTGCTTTTGGGAC+AGG - chr3_2:34830401-34830420 None:intergenic 45.0%
! AGTTGGACCATCGAAGTATC+AGG + chr3_2:34830422-34830441 Msa0404120:CDS 45.0%
AAACCAGACCCAATTCACGA+TGG + chr3_2:34830454-34830473 Msa0404120:CDS 45.0%
TAGTTGGGCCATCGTGAATT+GGG - chr3_2:34830465-34830484 None:intergenic 45.0%
TTAGTTGGGCCATCGTGAAT+TGG - chr3_2:34830466-34830485 None:intergenic 45.0%
! TGGGAAGTCGTCGATTAGTT+GGG - chr3_2:34830480-34830499 None:intergenic 45.0%
! TTGGGAAGTCGTCGATTAGT+TGG - chr3_2:34830481-34830500 None:intergenic 45.0%
CTTCCCAAGTCATGAATTCC+CGG + chr3_2:34830493-34830512 Msa0404120:CDS 45.0%
GTAACCGGGAATTCATGACT+TGG - chr3_2:34830500-34830519 None:intergenic 45.0%
CTGGTATCTCCACTTCAGTA+TGG + chr3_2:34830594-34830613 Msa0404120:CDS 45.0%
GCCCTCTATGTATGCTTTGA+AGG + chr3_2:34830677-34830696 Msa0404120:CDS 45.0%
!! TGTATGCTTTGAAGGTGCTG+AGG + chr3_2:34830685-34830704 Msa0404120:CDS 45.0%
GCAAGAATGATATCACGGGA+AGG - chr3_2:34830773-34830792 None:intergenic 45.0%
!! GACGTTTTAACACCCGATCA+TGG + chr3_2:34830809-34830828 Msa0404120:CDS 45.0%
AGCTCAGCATCAACATGTGA+AGG - chr3_2:34830959-34830978 None:intergenic 45.0%
GGCAGTATTTCATCATGGCA+CGG - chr3_2:34831196-34831215 None:intergenic 45.0%
CAGATGCCTTACTTGCTTAG+AGG + chr3_2:34831235-34831254 Msa0404120:CDS 45.0%
GCATAGCCTCTAAGCAAGTA+AGG - chr3_2:34831244-34831263 None:intergenic 45.0%
TAGCAACTCTTGTGTGAACC+AGG + chr3_2:34831589-34831608 Msa0404120:intron 45.0%
CACAACCAGCAGTATCTGAA+AGG + chr3_2:34831840-34831859 Msa0404120:intron 45.0%
CTTTCCCTTTCAGATACTGC+TGG - chr3_2:34831848-34831867 None:intergenic 45.0%
GTTGAAGTTACAATGGACGG+TGG + chr3_2:34832145-34832164 Msa0404120:CDS 45.0%
CAGCACTTACCGTACTTGTT+TGG - chr3_2:34832211-34832230 None:intergenic 45.0%
CAAACAAGTACGGTAAGTGC+TGG + chr3_2:34832209-34832228 Msa0404120:CDS 45.0%
!! GTTGAAGTGTTGGACCTTCT+TGG + chr3_2:34832256-34832275 Msa0404120:CDS 45.0%
CAATATCCTTGGCTCCAAGA+AGG - chr3_2:34832273-34832292 None:intergenic 45.0%
AGCTCGTACAGCAATATCCT+TGG - chr3_2:34832284-34832303 None:intergenic 45.0%
AGGATATTGCTGTACGAGCT+TGG + chr3_2:34832284-34832303 Msa0404120:intron 45.0%
GGATATTGCTGTACGAGCTT+GGG + chr3_2:34832285-34832304 Msa0404120:intron 45.0%
AGGGCATGATGAATAACTGC+TGG + chr3_2:34832572-34832591 Msa0404120:intron 45.0%
! ATTGGTTCCCTGGTTGAGTT+GGG - chr3_2:34832660-34832679 None:intergenic 45.0%
GTGAAGAGAGACTCTTCTTG+AGG - chr3_2:34832741-34832760 None:intergenic 45.0%
TTCATCAAAGATCACCCTGG+TGG + chr3_2:34832871-34832890 Msa0404120:CDS 45.0%
!! CTTGGCTTTGTCAGAGTGAA+TGG - chr3_2:34832950-34832969 None:intergenic 45.0%
!! ATGATCGAGGAGTACCGAAT+CGG + chr3_2:34832973-34832992 Msa0404120:CDS 45.0%
ATCGGTGAACTCATAACCAG+TGG + chr3_2:34832991-34833010 Msa0404120:CDS 45.0%
! TGCATGAGGTTTTCTCACGT+GGG - chr3_2:34833128-34833147 None:intergenic 45.0%
! TTGCATGAGGTTTTCTCACG+TGG - chr3_2:34833129-34833148 None:intergenic 45.0%
AGTCAATCTCTCACGACGTT+AGG + chr3_2:34833163-34833182 Msa0404120:CDS 45.0%
GCCTTACGAAGAACAACTCT+TGG + chr3_2:34833203-34833222 Msa0404120:CDS 45.0%
CCCAAGAGTTGTTCTTCGTA+AGG - chr3_2:34833207-34833226 None:intergenic 45.0%
AAGAATATGTGCTTCCCCAC+GGG - chr3_2:34833234-34833253 None:intergenic 45.0%
GTGCATCCAAAGTTCCCTAA+TGG + chr3_2:34833360-34833379 Msa0404120:CDS 45.0%
CATCCAAAGTTCCCTAATGG+TGG + chr3_2:34833363-34833382 Msa0404120:CDS 45.0%
GAGACATTAGGCCACCATTA+GGG - chr3_2:34833377-34833396 None:intergenic 45.0%
TGAGACATTAGGCCACCATT+AGG - chr3_2:34833378-34833397 None:intergenic 45.0%
TGGCCTAATGTCTCAACACT+TGG + chr3_2:34833383-34833402 Msa0404120:CDS 45.0%
!! AATGCCTATTGGCTCAACCT+TGG + chr3_2:34833410-34833429 Msa0404120:CDS 45.0%
CACATAGAGTATACGGGTAG+AGG + chr3_2:34833453-34833472 Msa0404120:CDS 45.0%
! TGAGGGAAGAGATGGATTCA+TGG + chr3_2:34833646-34833665 Msa0404120:CDS 45.0%
! GAGGGAAGAGATGGATTCAT+GGG + chr3_2:34833647-34833666 Msa0404120:CDS 45.0%
GAAGGGTGGGAATATAGTGT+TGG + chr3_2:34833723-34833742 Msa0404120:CDS 45.0%
! TTTGAAGCAGCATGTTCCAC+AGG + chr3_2:34833764-34833783 Msa0404120:CDS 45.0%
AATGTATCTGGAGAAGCCTG+TGG - chr3_2:34833783-34833802 None:intergenic 45.0%
ACAGGCTTCTCCAGATACAT+TGG + chr3_2:34833782-34833801 Msa0404120:CDS 45.0%
CATGCCAATGCCAATGTATC+TGG - chr3_2:34833795-34833814 None:intergenic 45.0%
!! GATACATTGGCATTGGCATG+TGG + chr3_2:34833795-34833814 Msa0404120:CDS 45.0%
GTAGCCCAACTTCTCCAAAT+TGG - chr3_2:34833853-34833872 None:intergenic 45.0%
TGAAATGGCAATGGCGGTTG+AGG - chr3_2:34830095-34830114 None:intergenic 50.0%
TTCGTCTTCCTCTTCGCTTG+AGG - chr3_2:34830129-34830148 None:intergenic 50.0%
GGAAGACGAAGACGAAGAGA+AGG + chr3_2:34830139-34830158 Msa0404120:CDS 50.0%
!! CGACGGTTCTAGTTCTTTGG+TGG - chr3_2:34830210-34830229 None:intergenic 50.0%
TCGCGTGGATCAAAGATCGA+CGG - chr3_2:34830227-34830246 None:intergenic 50.0%
!! AGTGGTGGCTCTGAGTTGAA+GGG - chr3_2:34830314-34830333 None:intergenic 50.0%
! GACCATCGAAGTATCAGGTC+TGG + chr3_2:34830427-34830446 Msa0404120:CDS 50.0%
GACCAGACCTGATACTTCGA+TGG - chr3_2:34830432-34830451 None:intergenic 50.0%
TCATGTTCTGTTCCTTGCGC+CGG - chr3_2:34830541-34830560 None:intergenic 50.0%
ATCTCCACTTCAGTATGGCG+CGG + chr3_2:34830599-34830618 Msa0404120:CDS 50.0%
GGAATCTTGAACCGCAACAG+TGG + chr3_2:34830653-34830672 Msa0404120:CDS 50.0%
TATTTGGATCCACCACCACC+TGG - chr3_2:34830716-34830735 None:intergenic 50.0%
!! GGTGGTGGTGGATCCAAATA+TGG + chr3_2:34830716-34830735 Msa0404120:CDS 50.0%
! TTCAGCTTGGTGGTACAAGC+CGG + chr3_2:34831126-34831145 Msa0404120:intron 50.0%
GAGAAATTCTTGGGTGGTCC+AGG - chr3_2:34831754-34831773 None:intergenic 50.0%
! ATTGATGATTGTGCAGGGGG+TGG + chr3_2:34832106-34832125 Msa0404120:intron 50.0%
AACGTGGCAGGTATGCACAT+TGG + chr3_2:34832171-34832190 Msa0404120:CDS 50.0%
GTCCTTGGAGGTTGAAGTGT+TGG + chr3_2:34832246-34832265 Msa0404120:CDS 50.0%
GTCCAACACTTCAACCTCCA+AGG - chr3_2:34832251-34832270 None:intergenic 50.0%
CCAAATGAGGTTCTCGGGTT+GGG - chr3_2:34832326-34832345 None:intergenic 50.0%
TCCAAATGAGGTTCTCGGGT+TGG - chr3_2:34832327-34832346 None:intergenic 50.0%
! GATTGGTTCCCTGGTTGAGT+TGG - chr3_2:34832661-34832680 None:intergenic 50.0%
ACTCAACCAGGGAACCAATC+AGG + chr3_2:34832661-34832680 Msa0404120:CDS 50.0%
TCCGCATGGATCATAGTCCA+TGG + chr3_2:34832826-34832845 Msa0404120:CDS 50.0%
! GCCATGGACTATGATCCATG+CGG - chr3_2:34832830-34832849 None:intergenic 50.0%
CGCTTCATCAAAGATCACCC+TGG + chr3_2:34832868-34832887 Msa0404120:CDS 50.0%
GATAGCATCCTCATCAACGC+TGG + chr3_2:34832898-34832917 Msa0404120:CDS 50.0%
CTTGATGGGGGCCAAATTTG+TGG - chr3_2:34833064-34833083 None:intergenic 50.0%
CACAAATTTGGCCCCCATCA+AGG + chr3_2:34833062-34833081 Msa0404120:CDS 50.0%
ACAACTCTTGGGATTACCCG+TGG + chr3_2:34833215-34833234 Msa0404120:CDS 50.0%
CAACTCTTGGGATTACCCGT+GGG + chr3_2:34833216-34833235 Msa0404120:CDS 50.0%
AACTCTTGGGATTACCCGTG+GGG + chr3_2:34833217-34833236 Msa0404120:CDS 50.0%
AGGCCACCATTAGGGAACTT+TGG - chr3_2:34833369-34833388 None:intergenic 50.0%
! TGCGAAGAGACTAGCCATGT+TGG + chr3_2:34833506-34833525 Msa0404120:CDS 50.0%
! AAGAGACTAGCCATGTTGGC+CGG + chr3_2:34833510-34833529 Msa0404120:CDS 50.0%
!! TGGTGTTATCCCACTTCCAC+CGG - chr3_2:34833532-34833551 None:intergenic 50.0%
ACTGCAAACTGAACCATGGG+TGG - chr3_2:34833825-34833844 None:intergenic 50.0%
CTGGGGTTGACCTGAAAGTG+TGG - chr3_2:34830049-34830068 None:intergenic 55.0%
ACCTCAATGCTCCGTCTGAC+AGG + chr3_2:34830281-34830300 Msa0404120:CDS 55.0%
!! AGGGGTGTTTGCCTGTCAGA+CGG - chr3_2:34830295-34830314 None:intergenic 55.0%
!! GTGGTGGCTCTGAGTTGAAG+GGG - chr3_2:34830313-34830332 None:intergenic 55.0%
!! GAGTGGTGGCTCTGAGTTGA+AGG - chr3_2:34830315-34830334 None:intergenic 55.0%
! GGTTGCGGACATAGTGGAGT+GGG - chr3_2:34830373-34830392 None:intergenic 55.0%
! TGGTTGCGGACATAGTGGAG+TGG - chr3_2:34830374-34830393 None:intergenic 55.0%
CTCCACTATGTCCGCAACCA+CGG + chr3_2:34830374-34830393 Msa0404120:CDS 55.0%
!!! TTGCTTTTGGGACAGGTCCG+TGG - chr3_2:34830394-34830413 None:intergenic 55.0%
!!! GGTTTTAACTGGGGTGCAGC+TGG + chr3_2:34830575-34830594 Msa0404120:CDS 55.0%
TACACCGCGCCATACTGAAG+TGG - chr3_2:34830606-34830625 None:intergenic 55.0%
!! CATAGAGGGCACCACTGTTG+CGG - chr3_2:34830667-34830686 None:intergenic 55.0%
GCTGAGCTTGCCAATGCTGA+AGG + chr3_2:34830971-34830990 Msa0404120:CDS 55.0%
TTGTGCAGGGGGTGGTAGAA+AGG + chr3_2:34832114-34832133 Msa0404120:intron 55.0%
CAATGGACGGTGGTGAAACG+TGG + chr3_2:34832155-34832174 Msa0404120:CDS 55.0%
!! AGTACGGTAAGTGCTGGTGC+TGG + chr3_2:34832215-34832234 Msa0404120:CDS 55.0%
!!! AGTGCTGGTGCTGGTGCTTT+TGG + chr3_2:34832224-34832243 Msa0404120:CDS 55.0%
!! GTGCTGGTGCTTTTGGTCCT+TGG + chr3_2:34832231-34832250 Msa0404120:CDS 55.0%
! CTGGTGCTTTTGGTCCTTGG+AGG + chr3_2:34832234-34832253 Msa0404120:CDS 55.0%
GTTGGACCTTCTTGGAGCCA+AGG + chr3_2:34832264-34832283 Msa0404120:CDS 55.0%
!! GTTCTCGGGTTGGGTGTTGA+GGG - chr3_2:34832317-34832336 None:intergenic 55.0%
CCCAACCCGAGAACCTCATT+TGG + chr3_2:34832323-34832342 Msa0404120:intron 55.0%
TTCGAGCACCCAACTCAACC+AGG + chr3_2:34832649-34832668 Msa0404120:CDS 55.0%
TCGAGCACCCAACTCAACCA+GGG + chr3_2:34832650-34832669 Msa0404120:CDS 55.0%
CAACCAGGGAACCAATCAGG+TGG + chr3_2:34832664-34832683 Msa0404120:CDS 55.0%
GAACCAATCAGGTGGCTGGA+TGG + chr3_2:34832672-34832691 Msa0404120:CDS 55.0%
TTGCCATCCAGCCACCTGAT+TGG - chr3_2:34832678-34832697 None:intergenic 55.0%
TGCAGTCGTAGACATGGCCA+TGG - chr3_2:34832846-34832865 None:intergenic 55.0%
AGCGAGTGCAGTCGTAGACA+TGG - chr3_2:34832852-34832871 None:intergenic 55.0%
!! AATCGGTGCCAGCGTTGATG+AGG - chr3_2:34832909-34832928 None:intergenic 55.0%
ATTGGAGGAGTGACTGCCAC+TGG - chr3_2:34833010-34833029 None:intergenic 55.0%
GCAAACTGAACCATGGGTGG+CGG - chr3_2:34833822-34833841 None:intergenic 55.0%
TCAGAGGTCTCAGCATCGCG+TGG - chr3_2:34830242-34830261 None:intergenic 60.0%
!! GCCTGTCAGACGGAGCATTG+AGG - chr3_2:34830285-34830304 None:intergenic 60.0%
! CGGACATAGTGGAGTGGGAC+AGG - chr3_2:34830368-34830387 None:intergenic 60.0%
GTCCGTGGTTGCGGACATAG+TGG - chr3_2:34830379-34830398 None:intergenic 60.0%
TTGGGACAGGTCCGTGGTTG+CGG - chr3_2:34830388-34830407 None:intergenic 60.0%
GGGCCATCGTGAATTGGGTC+TGG - chr3_2:34830460-34830479 None:intergenic 60.0%
CCGCGCATACGAGAGTAACC+GGG - chr3_2:34830514-34830533 None:intergenic 60.0%
CCCGGTTACTCTCGTATGCG+CGG + chr3_2:34830511-34830530 Msa0404120:CDS 60.0%
CCCGCGCATACGAGAGTAAC+CGG - chr3_2:34830515-34830534 None:intergenic 60.0%
CCGGTTACTCTCGTATGCGC+GGG + chr3_2:34830512-34830531 Msa0404120:CDS 60.0%
CTCTCGTATGCGCGGGTAAC+CGG + chr3_2:34830519-34830538 Msa0404120:CDS 60.0%
GCGCGGTGTACCATTGTGCA+CGG + chr3_2:34830616-34830635 Msa0404120:CDS 60.0%
!! GAAGGTGCTGAGGAACTGCC+AGG + chr3_2:34830695-34830714 Msa0404120:CDS 60.0%
!! GGTTCTCGGGTTGGGTGTTG+AGG - chr3_2:34832318-34832337 None:intergenic 60.0%
! CAGCCACCTGATTGGTTCCC+TGG - chr3_2:34832670-34832689 None:intergenic 60.0%
CAGGGAACCAATCAGGTGGC+TGG + chr3_2:34832668-34832687 Msa0404120:CDS 60.0%
GGATGCTATCTGCGCCACCA+GGG - chr3_2:34832888-34832907 None:intergenic 60.0%
AGGATGCTATCTGCGCCACC+AGG - chr3_2:34832889-34832908 None:intergenic 60.0%
! AGACTAGCCATGTTGGCCGG+TGG + chr3_2:34833513-34833532 Msa0404120:CDS 60.0%
CCATGTTGGCCGGTGGAAGT+GGG + chr3_2:34833520-34833539 Msa0404120:CDS 60.0%
! CGCTCGAGCACCGTGCACAA+TGG - chr3_2:34830629-34830648 None:intergenic 65.0%
! TGCACGGTGCTCGAGCGTTG+TGG + chr3_2:34830632-34830651 Msa0404120:CDS 65.0%
! GGTGCTGAGGAACTGCCAGG+TGG + chr3_2:34830698-34830717 Msa0404120:CDS 65.0%
GCTGAGGAACTGCCAGGTGG+TGG + chr3_2:34830701-34830720 Msa0404120:CDS 65.0%
! GAGGAACTGCCAGGTGGTGG+TGG + chr3_2:34830704-34830723 Msa0404120:CDS 65.0%
GGACGGTGGTGAAACGTGGC+AGG + chr3_2:34832159-34832178 Msa0404120:CDS 65.0%
!! CGCTGGCACCGATTGCACAG+AGG + chr3_2:34832915-34832934 Msa0404120:CDS 65.0%
GCCATGTTGGCCGGTGGAAG+TGG + chr3_2:34833519-34833538 Msa0404120:CDS 65.0%
CCCACTTCCACCGGCCAACA+TGG - chr3_2:34833523-34833542 None:intergenic 65.0%
ATGCGCGGGTAACCGGCGCA+AGG + chr3_2:34830526-34830545 Msa0404120:CDS 70.0%
GGCATGTGGGCCGCCACCCA+TGG + chr3_2:34833809-34833828 Msa0404120:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 34829993 34833902 34829993 ID=Msa0404120;Name=Msa0404120
chr3_2 mRNA 34829993 34833902 34829993 ID=Msa0404120-mRNA-1;Parent=Msa0404120;Name=Msa0404120-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|4|0|880
chr3_2 exon 34829993 34830992 34829993 ID=Msa0404120-mRNA-1:exon:7094;Parent=Msa0404120-mRNA-1
chr3_2 exon 34831131 34831271 34831131 ID=Msa0404120-mRNA-1:exon:7095;Parent=Msa0404120-mRNA-1
chr3_2 exon 34832122 34832294 34832122 ID=Msa0404120-mRNA-1:exon:7096;Parent=Msa0404120-mRNA-1
chr3_2 exon 34832574 34833902 34832574 ID=Msa0404120-mRNA-1:exon:7097;Parent=Msa0404120-mRNA-1
chr3_2 CDS 34829993 34830992 34829993 ID=Msa0404120-mRNA-1:cds;Parent=Msa0404120-mRNA-1
chr3_2 CDS 34831131 34831271 34831131 ID=Msa0404120-mRNA-1:cds;Parent=Msa0404120-mRNA-1
chr3_2 CDS 34832122 34832294 34832122 ID=Msa0404120-mRNA-1:cds;Parent=Msa0404120-mRNA-1
chr3_2 CDS 34832574 34833902 34832574 ID=Msa0404120-mRNA-1:cds;Parent=Msa0404120-mRNA-1
Gene Sequence

>Msa0404120

ATGGCGGCTTCTGTAGATAATCGCATCTGGACAGGCCTTGAAAAAGGTCCAATCCACACTTTCAGGTCAACCCCAGATGTCATGCATTTCAATAAATCTCCTCAACCGCCATTGCCATTTCATAATTATCATTCCTCAAGCGAAGAGGAAGACGAAGACGAAGAGAAGGAGATTCAAAACTTCAATAACGACCTCATTATGAAATCAAAGCAAACCACCAAAGAACTAGAACCGTCGATCTTTGATCCACGCGATGCTGAGACCTCTGATCAATGGATTAAACGGAACACCTCAATGCTCCGTCTGACAGGCAAACACCCCTTCAACTCAGAGCCACCACTCCAAGAACTAATACAGCATGGTTTCATCACACCTGTCCCACTCCACTATGTCCGCAACCACGGACCTGTCCCAAAAGCAAAATGGGATAGTTGGACCATCGAAGTATCAGGTCTGGTCAAAAACCAGACCCAATTCACGATGGCCCAACTAATCGACGACTTCCCAAGTCATGAATTCCCGGTTACTCTCGTATGCGCGGGTAACCGGCGCAAGGAACAGAACATGATAAAACAAAGCATTGGTTTTAACTGGGGTGCAGCTGGTATCTCCACTTCAGTATGGCGCGGTGTACCATTGTGCACGGTGCTCGAGCGTTGTGGAATCTTGAACCGCAACAGTGGTGCCCTCTATGTATGCTTTGAAGGTGCTGAGGAACTGCCAGGTGGTGGTGGATCCAAATATGGAACTAGTATCACAAGAGAGGTTGCATTGGATCCTTCCCGTGATATCATTCTTGCGTATATGCAAAACGGTGACGTTTTAACACCCGATCATGGTTTTCCTGTTAGAGTTATAATACCTGGTTTCATTGGAGGAAGAATGGTGAAATGGTTGAAACGTATTATTGTTACTTCTCAACAATCTGATAATTATTATCACTACAATGATAATAGAGTACTTCCTTCACATGTTGATGCTGAGCTTGCCAATGCTGAAGCTTGGTGGTACAAGCCGGAGTATATTATAAACGAGCTGAATGTAAACTCTGTGATAACATCACCGTGCCATGATGAAATACTGCCTATCAACTCATGCACTACTCAGATGCCTTACTTGCTTAGAGGCTATGCATATTCAGGGGGTGGTAGAAAGGTGACACGTGTTGAAGTTACAATGGACGGTGGTGAAACGTGGCAGGTATGCACATTGGACCATTCAGAAAAACCAAACAAGTACGGTAAGTGCTGGTGCTGGTGCTTTTGGTCCTTGGAGGTTGAAGTGTTGGACCTTCTTGGAGCCAAGGATATTGCTGGCATGATGAATAACTGCTGGTTCAAAGTGAAATCAAGTTTATGCAAAGCTAACAAGGGTGAGATTGGAATACTGTTCGAGCACCCAACTCAACCAGGGAACCAATCAGGTGGCTGGATGGCAAAAGAAAGACAGTTGGAAAAATCATCAGACTCTAACTCAATCCTCAAGAAGAGTCTCTCTTCACCCTTCATGATCACTAGCTCAAAAACCTACACCGTTTCTGAAGTAAAAAAACATAATAACGCTGAATCCGCATGGATCATAGTCCATGGCCATGTCTACGACTGCACTCGCTTCATCAAAGATCACCCTGGTGGCGCAGATAGCATCCTCATCAACGCTGGCACCGATTGCACAGAGGAGTTTGAAGCCATTCACTCTGACAAAGCCAAGAATATGATCGAGGAGTACCGAATCGGTGAACTCATAACCAGTGGCAGTCACTCCTCCAATTCGTCACCAAATAACTCAATGCACAATGATGCCACAAATTTGGCCCCCATCAAGGAAATGCTTAAAGATACACCCTTGTGTAGTGTAGCTTTAAACCCACGTGAGAAAACCTCATGCAAGCTTCTCTTTAAAAAGTCAATCTCTCACGACGTTAGGCTCTTTCGTTTTGCATTGCCTTACGAAGAACAACTCTTGGGATTACCCGTGGGGAAGCACATATTCTTATGCGCTACTATTGATGAGAAGTTATGCATGCGAGCTTACACTCCAACAAGCAGTGTAGATGAAAAGGGACACTTTGATCTAGTGGTTAAGATTTACTTAAAAGGGGTGCATCCAAAGTTCCCTAATGGTGGCCTAATGTCTCAACACTTGGATTCAATGCCTATTGGCTCAACCTTGGATATAAAAGGCCCATTAGGACACATAGAGTATACGGGTAGAGGAAACTTTATGGTTCACGGTAAGCACAAATTTGCGAAGAGACTAGCCATGTTGGCCGGTGGAAGTGGGATAACACCAATTTACCAAGTGGCAAAAGCGATTCTAAGAGACCAAGAAGATCTTACTGAAATGCATGTTGTGTATGCTAATCGAAGTGAGGATGATATATTGTTGAGGGAAGAGATGGATTCATGGGCTAAGAAGCATGAACGATTCAAAGTGTGGTATGTGGTGCAAGAAAGTAAAAGAGAAGGGTGGGAATATAGTGTTGGGTTCGTTACTGAAAGTATTTTGAAGCAGCATGTTCCACAGGCTTCTCCAGATACATTGGCATTGGCATGTGGGCCGCCACCCATGGTTCAGTTTGCAGTAAAGCCCAATTTGGAGAAGTTGGGCTACGACGTTACCAACAACTTGCTACTCTTCTAA
Protein sequence

>Msa0404120

MAASVDNRIWTGLEKGPIHTFRSTPDVMHFNKSPQPPLPFHNYHSSSEEEDEDEEKEIQNFNNDLIMKSKQTTKELEPSIFDPRDAETSDQWIKRNTSMLRLTGKHPFNSEPPLQELIQHGFITPVPLHYVRNHGPVPKAKWDSWTIEVSGLVKNQTQFTMAQLIDDFPSHEFPVTLVCAGNRRKEQNMIKQSIGFNWGAAGISTSVWRGVPLCTVLERCGILNRNSGALYVCFEGAEELPGGGGSKYGTSITREVALDPSRDIILAYMQNGDVLTPDHGFPVRVIIPGFIGGRMVKWLKRIIVTSQQSDNYYHYNDNRVLPSHVDAELANAEAWWYKPEYIINELNVNSVITSPCHDEILPINSCTTQMPYLLRGYAYSGGGRKVTRVEVTMDGGETWQVCTLDHSEKPNKYGKCWCWCFWSLEVEVLDLLGAKDIAGMMNNCWFKVKSSLCKANKGEIGILFEHPTQPGNQSGGWMAKERQLEKSSDSNSILKKSLSSPFMITSSKTYTVSEVKKHNNAESAWIIVHGHVYDCTRFIKDHPGGADSILINAGTDCTEEFEAIHSDKAKNMIEEYRIGELITSGSHSSNSSPNNSMHNDATNLAPIKEMLKDTPLCSVALNPREKTSCKLLFKKSISHDVRLFRFALPYEEQLLGLPVGKHIFLCATIDEKLCMRAYTPTSSVDEKGHFDLVVKIYLKGVHPKFPNGGLMSQHLDSMPIGSTLDIKGPLGHIEYTGRGNFMVHGKHKFAKRLAMLAGGSGITPIYQVAKAILRDQEDLTEMHVVYANRSEDDILLREEMDSWAKKHERFKVWYVVQESKREGWEYSVGFVTESILKQHVPQASPDTLALACGPPPMVQFAVKPNLEKLGYDVTNNLLLF*