Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410940 | XP_013460014.1 | 81.910 | 199 | 8 | 1 | 21 | 191 | 21 | 219 | 4.18e-108 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410940 | sp|P82413|RK19_SPIOL | 63.107 | 103 | 38 | 0 | 88 | 190 | 127 | 229 | 1.20e-40 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410940 | A0A072V7A1 | 81.910 | 199 | 8 | 1 | 21 | 191 | 21 | 219 | 2.00e-108 | 318 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0410940 | Msa1235950 | 0.811870 | 5.639425e-51 | -8.615850e-47 |
| Msa0410940 | Msa1235980 | 0.820612 | 6.257106e-53 | -8.615850e-47 |
| Msa0410940 | Msa1465700 | 0.825483 | 4.572999e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410940 | MtrunA17_Chr3g0102051 | 81.910 | 199 | 8 | 1 | 21 | 191 | 21 | 219 | 3.84e-112 | 318 |
| Msa0410940 | MtrunA17_Chr5g0399711 | 38.298 | 188 | 102 | 3 | 10 | 187 | 39 | 222 | 9.36e-39 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410940 | AT4G11630.1 | 82.692 | 104 | 18 | 0 | 88 | 191 | 120 | 223 | 4.45e-60 | 187 |
| Msa0410940 | AT5G11750.1 | 82.692 | 104 | 18 | 0 | 88 | 191 | 124 | 227 | 7.52e-60 | 187 |
| Msa0410940 | AT5G11750.2 | 82.692 | 104 | 18 | 0 | 88 | 191 | 148 | 251 | 1.66e-59 | 186 |
| Msa0410940 | AT1G24240.1 | 59.756 | 164 | 65 | 1 | 28 | 191 | 58 | 220 | 4.06e-52 | 167 |
| Msa0410940 | AT4G17560.1 | 60.194 | 103 | 41 | 0 | 88 | 190 | 119 | 221 | 2.31e-36 | 126 |
| Msa0410940 | AT5G47190.1 | 61.000 | 100 | 39 | 0 | 88 | 187 | 123 | 222 | 2.45e-36 | 126 |
Find 54 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCGTGTTTCTATTATAAA+AGG | 0.194759 | 3_2:+52913227 | Msa0410940:CDS |
| CTAGATTCTTTATTTGAATA+AGG | 0.209570 | 3_2:+52914094 | Msa0410940:three_prime_UTR |
| CTTTAGATCATGCCGTGTTT+TGG | 0.291276 | 3_2:+52914162 | Msa0410940:three_prime_UTR |
| ATCCCTCAGGTAGTAGAGTT+TGG | 0.318153 | 3_2:-52913944 | None:intergenic |
| ACCTTTATCTCCTTTATGTT+AGG | 0.356884 | 3_2:-52913895 | None:intergenic |
| ACCTAACATAAAGGAGATAA+AGG | 0.358575 | 3_2:+52913894 | Msa0410940:CDS |
| ACACTACATTCAGACTTAGA+AGG | 0.398714 | 3_2:+52913282 | Msa0410940:CDS |
| GAAGGATGGTAGCTGGGGTT+GGG | 0.398853 | 3_2:+52913300 | Msa0410940:CDS |
| TTGTCCCTCATTTCCGAAGC+AGG | 0.430695 | 3_2:+52912782 | Msa0410940:CDS |
| ATATAACCAGGCTTTATATC+AGG | 0.433635 | 3_2:-52913065 | None:intergenic |
| AGAAGGATGGTAGCTGGGGT+TGG | 0.434672 | 3_2:+52913299 | Msa0410940:CDS |
| GCCATGGCTGTTTCGTATAG+AGG | 0.434760 | 3_2:-52910020 | None:intergenic |
| ATGCTGAAATGAAGGCAATC+TGG | 0.441606 | 3_2:-52912749 | None:intergenic |
| CGGTAGACATAAACCTGCTT+CGG | 0.445201 | 3_2:-52912795 | None:intergenic |
| AGAATGCATGTGAATACATA+TGG | 0.454243 | 3_2:-52914054 | None:intergenic |
| GACTTAGAAGGATGGTAGCT+GGG | 0.461287 | 3_2:+52913294 | Msa0410940:CDS |
| GGCGTGTTTCTATTATAAAA+GGG | 0.465947 | 3_2:+52913228 | Msa0410940:CDS |
| TTACGGTGGAGAAAGAGATT+TGG | 0.468649 | 3_2:-52910124 | None:intergenic |
| TAGAGGAAGAAGAAAAGCTT+TGG | 0.485398 | 3_2:-52910003 | None:intergenic |
| ATCTCTCACTCGCTCTTCAT+CGG | 0.487779 | 3_2:+52910076 | Msa0410940:CDS |
| AGACTTAGAAGGATGGTAGC+TGG | 0.494744 | 3_2:+52913293 | Msa0410940:CDS |
| AGACAAAGAAGCAGTGGAGG+AGG | 0.496174 | 3_2:+52913022 | Msa0410940:intron |
| CGGTGGAGAAAGAGATTTGG+CGG | 0.501530 | 3_2:-52910121 | None:intergenic |
| ATAAACCTGCTTCGGAAATG+AGG | 0.502963 | 3_2:-52912787 | None:intergenic |
| TAAAAGGGATTGTTATTGCA+AGG | 0.505129 | 3_2:+52913243 | Msa0410940:CDS |
| GTATCCTCTAGAGATGAGTC+TGG | 0.510292 | 3_2:+52912715 | Msa0410940:CDS |
| ACAGAACCATGCTGAAATGA+AGG | 0.517294 | 3_2:-52912757 | None:intergenic |
| CAGGTATTCACCTAACATAA+AGG | 0.524817 | 3_2:+52913885 | Msa0410940:intron |
| ACAGGCTGAAGATTAGTGTC+AGG | 0.525060 | 3_2:-52913990 | None:intergenic |
| GACACTAATCTTCAGCCTGT+TGG | 0.525169 | 3_2:+52913993 | Msa0410940:three_prime_UTR |
| TCTAGAGATGAGTCTGGTAA+TGG | 0.532054 | 3_2:+52912721 | Msa0410940:CDS |
| TCATATATCATAGGAAGTAC+CGG | 0.546725 | 3_2:+52913196 | Msa0410940:intron |
| GAGGTACCTGATATAAAGCC+TGG | 0.550742 | 3_2:+52913059 | Msa0410940:CDS |
| TCCTCTATACGAAACAGCCA+TGG | 0.552703 | 3_2:+52910019 | Msa0410940:exon |
| GAAACACGCCTCTTGTTCTC+CGG | 0.554578 | 3_2:-52913215 | None:intergenic |
| TTTAGACAAAGAAGCAGTGG+AGG | 0.569964 | 3_2:+52913019 | Msa0410940:intron |
| GTTATTGCAAGGCGTAATTG+TGG | 0.573207 | 3_2:+52913254 | Msa0410940:CDS |
| GAGATTTGGCGGAGATACGT+CGG | 0.584699 | 3_2:-52910110 | None:intergenic |
| GAAGAGTCTTCGTGAAGCCA+TGG | 0.589431 | 3_2:-52910036 | None:intergenic |
| TAAACCTGCTTCGGAAATGA+GGG | 0.601675 | 3_2:-52912786 | None:intergenic |
| AGGAAGTACCGGAGAACAAG+AGG | 0.604082 | 3_2:+52913207 | Msa0410940:intron |
| GGAGGTGAAAGAACAGAGAG+AGG | 0.615909 | 3_2:+52913040 | Msa0410940:CDS |
| TTGAGCTGCACAATATAACC+AGG | 0.624977 | 3_2:-52913077 | None:intergenic |
| AGAATCAACAGAATTTGTCT+CGG | 0.631893 | 3_2:-52912815 | None:intergenic |
| TACATTCAGACTTAGAAGGA+TGG | 0.634854 | 3_2:+52913286 | Msa0410940:CDS |
| GAGCCAAACTCTACTACCTG+AGG | 0.635973 | 3_2:+52913941 | Msa0410940:CDS |
| AGATTGCCTTCATTTCAGCA+TGG | 0.636188 | 3_2:+52912751 | Msa0410940:CDS |
| AAGAGCGAGTGAGAGATGAA+CGG | 0.636322 | 3_2:-52910070 | None:intergenic |
| ACTTAGAAGGATGGTAGCTG+GGG | 0.639779 | 3_2:+52913295 | Msa0410940:CDS |
| CTAGAGGATACATTCGTCTG+AGG | 0.640083 | 3_2:-52912703 | None:intergenic |
| ATTACCAGACTCATCTCTAG+AGG | 0.648515 | 3_2:-52912719 | None:intergenic |
| ACACTATCCTTTCCAAAACA+CGG | 0.669186 | 3_2:-52914174 | None:intergenic |
| AGCCAAACTCTACTACCTGA+GGG | 0.676552 | 3_2:+52913942 | Msa0410940:CDS |
| TTATATTGTGCAGCTCAAAG+TGG | 0.710180 | 3_2:+52913082 | Msa0410940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCATAAACTTAAAATA+AGG | - | chr3_2:52910457-52910476 | None:intergenic | 10.0% |
| !!! | TAATAATTTTAGATTTTAGA+TGG | - | chr3_2:52914127-52914146 | None:intergenic | 10.0% |
| !!! | TTTTTTTTCATATAGACTAT+GGG | - | chr3_2:52910656-52910675 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCATATAGACTA+TGG | - | chr3_2:52910657-52910676 | None:intergenic | 15.0% |
| !!! | TAATTTTAGTTTACTTTCAT+AGG | + | chr3_2:52911803-52911822 | Msa0410940:intron | 15.0% |
| !! | AACATTAAATAAACAGAAAT+GGG | - | chr3_2:52912023-52912042 | None:intergenic | 15.0% |
| !! | TAACATTAAATAAACAGAAA+TGG | - | chr3_2:52912024-52912043 | None:intergenic | 15.0% |
| !!! | TGTGTTTTGTTTTAAATAAA+GGG | + | chr3_2:52912939-52912958 | Msa0410940:intron | 15.0% |
| !! | TAATCATTTGTAAAAATTGT+TGG | + | chr3_2:52912974-52912993 | Msa0410940:intron | 15.0% |
| !!! | TTCTTTTTATTCTCTTTTTT+GGG | - | chr3_2:52913558-52913577 | None:intergenic | 15.0% |
| !!! | ATTCTTTTTATTCTCTTTTT+TGG | - | chr3_2:52913559-52913578 | None:intergenic | 15.0% |
| !! | TTATTTGAATTATTGTTATG+AGG | + | chr3_2:52913615-52913634 | Msa0410940:intron | 15.0% |
| !! | TGTATAAGCTATAGAAAAAT+TGG | + | chr3_2:52910257-52910276 | Msa0410940:intron | 20.0% |
| !! | GTATAAGCTATAGAAAAATT+GGG | + | chr3_2:52910258-52910277 | Msa0410940:intron | 20.0% |
| !!! | GATTTTTTTATTGAAGAAAG+AGG | + | chr3_2:52910763-52910782 | Msa0410940:intron | 20.0% |
| !! | ACATAATTATAAGCAAAAGT+AGG | + | chr3_2:52911487-52911506 | Msa0410940:intron | 20.0% |
| !! | TCAAAGAAATTTCATGTATT+TGG | - | chr3_2:52911549-52911568 | None:intergenic | 20.0% |
| !! | ATTTCATAGCATATACAAAA+GGG | - | chr3_2:52911672-52911691 | None:intergenic | 20.0% |
| !! | TTAATTGTGGGATTATTTAA+TGG | + | chr3_2:52911893-52911912 | Msa0410940:intron | 20.0% |
| !!! | TAAAATCTTGCAATTTTTCA+TGG | + | chr3_2:52911986-52912005 | Msa0410940:intron | 20.0% |
| !!! | CTGTGTTTTGTTTTAAATAA+AGG | + | chr3_2:52912938-52912957 | Msa0410940:intron | 20.0% |
| !! | AGATATACATAAATTATGGA+AGG | - | chr3_2:52913356-52913375 | None:intergenic | 20.0% |
| !! | AAGCAGATATACATAAATTA+TGG | - | chr3_2:52913360-52913379 | None:intergenic | 20.0% |
| !!! | AGAATATGATGATGAATTTA+TGG | + | chr3_2:52913589-52913608 | Msa0410940:intron | 20.0% |
| !!! | GTATTTTCTAAAGTAACATA+AGG | - | chr3_2:52913716-52913735 | None:intergenic | 20.0% |
| !! | AAGCACAATTAACTTTAAAT+TGG | - | chr3_2:52913818-52913837 | None:intergenic | 20.0% |
| !!! | CTAGATTCTTTATTTGAATA+AGG | + | chr3_2:52914094-52914113 | Msa0410940:three_prime_UTR | 20.0% |
| ! | TGAAAACCATTTAAACACTT+AGG | - | chr3_2:52910792-52910811 | None:intergenic | 25.0% |
| !! | TTTTCAATCCGATATAATTG+AGG | + | chr3_2:52910806-52910825 | Msa0410940:intron | 25.0% |
| ! | ATGTCATTCCTCAATTATAT+CGG | - | chr3_2:52910817-52910836 | None:intergenic | 25.0% |
| ! | GGAGTATAATTAAAGGAATT+AGG | + | chr3_2:52910987-52911006 | Msa0410940:intron | 25.0% |
| ! | GTATCATGTTACAAATTGTA+AGG | + | chr3_2:52911057-52911076 | Msa0410940:intron | 25.0% |
| ! | ATATAATTTATGCATGGTAG+TGG | + | chr3_2:52911101-52911120 | Msa0410940:intron | 25.0% |
| ! | TATTATTGAGGCAATTGATT+TGG | + | chr3_2:52911166-52911185 | Msa0410940:intron | 25.0% |
| ! | AATGGATCCAAGATTAATAA+GGG | + | chr3_2:52911189-52911208 | Msa0410940:intron | 25.0% |
| ! | TCAAAGAAAGGTAATGTATT+TGG | + | chr3_2:52911510-52911529 | Msa0410940:intron | 25.0% |
| !!! | AATGTATTTGGTTCAAGTTT+TGG | + | chr3_2:52911522-52911541 | Msa0410940:intron | 25.0% |
| !!! | ACTTACTTTTGCTTCTATTA+AGG | + | chr3_2:52911568-52911587 | Msa0410940:intron | 25.0% |
| ! | GATTTCATAGCATATACAAA+AGG | - | chr3_2:52911673-52911692 | None:intergenic | 25.0% |
| ! | TTTGTATATGCTATGAAATC+TGG | + | chr3_2:52911673-52911692 | Msa0410940:intron | 25.0% |
| ! | TTGTATATGCTATGAAATCT+GGG | + | chr3_2:52911674-52911693 | Msa0410940:intron | 25.0% |
| ! | TATAGCTTATATGAAAGAGT+AGG | + | chr3_2:52911854-52911873 | Msa0410940:intron | 25.0% |
| !! | AACAATCTAAAGTGATTTCT+TGG | + | chr3_2:52912045-52912064 | Msa0410940:intron | 25.0% |
| ! | TCAAATATTCAATTGCACAA+TGG | + | chr3_2:52912096-52912115 | Msa0410940:intron | 25.0% |
| ! | TAATAAAACAGCCTAATAAC+CGG | - | chr3_2:52912420-52912439 | None:intergenic | 25.0% |
| !!! | GTTTTATTAGTTGAGCAATT+AGG | + | chr3_2:52912431-52912450 | Msa0410940:intron | 25.0% |
| !!! | TTCTTATGTCTTGTTTTTGT+TGG | + | chr3_2:52912564-52912583 | Msa0410940:intron | 25.0% |
| ! | AAAAAGTTGTTTATCCAAGT+TGG | + | chr3_2:52912620-52912639 | Msa0410940:intron | 25.0% |
| ! | AAAAGTTGTTTATCCAAGTT+GGG | + | chr3_2:52912621-52912640 | Msa0410940:intron | 25.0% |
| ! | TAATCTCTTAAATTTGATGC+GGG | - | chr3_2:52912878-52912897 | None:intergenic | 25.0% |
| ! | CTAATCTCTTAAATTTGATG+CGG | - | chr3_2:52912879-52912898 | None:intergenic | 25.0% |
| !! | CTTCTTTGTCTAAAATCTAA+AGG | - | chr3_2:52913013-52913032 | None:intergenic | 25.0% |
| ! | ACTGTTATGTCATATATCAT+AGG | + | chr3_2:52913187-52913206 | Msa0410940:intron | 25.0% |
| !!! | ATATTCATGCTATTTTGAAC+TGG | + | chr3_2:52913440-52913459 | Msa0410940:intron | 25.0% |
| !!! | TCTCTATCTTTTGACTTTTA+AGG | + | chr3_2:52913487-52913506 | Msa0410940:intron | 25.0% |
| !!! | TATCTTTTGACTTTTAAGGA+GGG | + | chr3_2:52913491-52913510 | Msa0410940:intron | 25.0% |
| ! | TTAATCACAAAAATTCCAAC+AGG | - | chr3_2:52914011-52914030 | None:intergenic | 25.0% |
| !!! | TCCTTAAATTTTTCAGAGTT+GGG | - | chr3_2:52914241-52914260 | None:intergenic | 25.0% |
| !! | AATTGAAGTGAAAGTGCTTA+CGG | - | chr3_2:52910144-52910163 | None:intergenic | 30.0% |
| GCTATAGAAAAATTGGGATA+CGG | + | chr3_2:52910264-52910283 | Msa0410940:intron | 30.0% | |
| CTATAGAAAAATTGGGATAC+GGG | + | chr3_2:52910265-52910284 | Msa0410940:intron | 30.0% | |
| AAAATAAGGTCAATCGAAAC+AGG | - | chr3_2:52910443-52910462 | None:intergenic | 30.0% | |
| TACAAACACTTGTAGCATAA+AGG | + | chr3_2:52910719-52910738 | Msa0410940:intron | 30.0% | |
| AGGTTTCCTAAGTGTTTAAA+TGG | + | chr3_2:52910783-52910802 | Msa0410940:intron | 30.0% | |
| TGACATATGTACATAAGCTT+TGG | + | chr3_2:52910831-52910850 | Msa0410940:intron | 30.0% | |
| ! | ATGTGGTGGAGTATAATTAA+AGG | + | chr3_2:52910980-52910999 | Msa0410940:intron | 30.0% |
| GTACTTTATGATCATGAATG+AGG | + | chr3_2:52911021-52911040 | Msa0410940:intron | 30.0% | |
| AGTGCGATATAATTTATGCA+TGG | + | chr3_2:52911095-52911114 | Msa0410940:intron | 30.0% | |
| GAATGGATCCAAGATTAATA+AGG | + | chr3_2:52911188-52911207 | Msa0410940:intron | 30.0% | |
| CTTACTTCCCTTATTAATCT+TGG | - | chr3_2:52911199-52911218 | None:intergenic | 30.0% | |
| ACATTCTTGTTGGATTTAAG+AGG | + | chr3_2:52911244-52911263 | Msa0410940:intron | 30.0% | |
| ACTATTCTGATTCCATTACA+GGG | + | chr3_2:52911289-52911308 | Msa0410940:intron | 30.0% | |
| ! | CTATTTTCATCTGAAGACAT+TGG | - | chr3_2:52911318-52911337 | None:intergenic | 30.0% |
| TTAGAGTAATGTATGCTCTT+TGG | + | chr3_2:52911388-52911407 | Msa0410940:intron | 30.0% | |
| TAGAGTAATGTATGCTCTTT+GGG | + | chr3_2:52911389-52911408 | Msa0410940:intron | 30.0% | |
| GAGATATTATGCTCATTGTA+CGG | + | chr3_2:52911411-52911430 | Msa0410940:intron | 30.0% | |
| GATTATGACAAAAGACTACA+TGG | - | chr3_2:52911438-52911457 | None:intergenic | 30.0% | |
| AACAATCTCAGCTTAATTGT+GGG | + | chr3_2:52911881-52911900 | Msa0410940:intron | 30.0% | |
| ATTGTGGGATTATTTAATGG+AGG | + | chr3_2:52911896-52911915 | Msa0410940:intron | 30.0% | |
| ATTTAATGGAGGAAAAGAAG+TGG | + | chr3_2:52911907-52911926 | Msa0410940:intron | 30.0% | |
| TTTAATGGAGGAAAAGAAGT+GGG | + | chr3_2:52911908-52911927 | Msa0410940:intron | 30.0% | |
| GACTTAAATTTAGCATGCTT+GGG | + | chr3_2:52911930-52911949 | Msa0410940:intron | 30.0% | |
| ! | TGCAATTTTTCATGGTAAAG+TGG | + | chr3_2:52911994-52912013 | Msa0410940:intron | 30.0% |
| CTAAAGTGATTTCTTGGAAT+TGG | + | chr3_2:52912051-52912070 | Msa0410940:intron | 30.0% | |
| AATAAAACAGCCTAATAACC+GGG | - | chr3_2:52912419-52912438 | None:intergenic | 30.0% | |
| TTTGTCACAATTTCTTGTGT+AGG | + | chr3_2:52912669-52912688 | Msa0410940:intron | 30.0% | |
| AGAATCAACAGAATTTGTCT+CGG | - | chr3_2:52912818-52912837 | None:intergenic | 30.0% | |
| AATCTCTTAAATTTGATGCG+GGG | - | chr3_2:52912877-52912896 | None:intergenic | 30.0% | |
| ! | ATATAACCAGGCTTTATATC+AGG | - | chr3_2:52913068-52913087 | None:intergenic | 30.0% |
| ! | TCATATATCATAGGAAGTAC+CGG | + | chr3_2:52913196-52913215 | Msa0410940:intron | 30.0% |
| ! | AGGCGTGTTTCTATTATAAA+AGG | + | chr3_2:52913227-52913246 | Msa0410940:CDS | 30.0% |
| ! | GGCGTGTTTCTATTATAAAA+GGG | + | chr3_2:52913228-52913247 | Msa0410940:CDS | 30.0% |
| ! | TAAAAGGGATTGTTATTGCA+AGG | + | chr3_2:52913243-52913262 | Msa0410940:CDS | 30.0% |
| AAGATAGAGACATAAATCAC+AGG | - | chr3_2:52913477-52913496 | None:intergenic | 30.0% | |
| !!! | CTATCTTTTGACTTTTAAGG+AGG | + | chr3_2:52913490-52913509 | Msa0410940:intron | 30.0% |
| ! | GGTCTGTTTGAATAAGTTTT+TGG | - | chr3_2:52913695-52913714 | None:intergenic | 30.0% |
| !! | ATAAGAGTATCAATTAGCTC+AGG | - | chr3_2:52913863-52913882 | None:intergenic | 30.0% |
| CTAATTGATACTCTTATGAC+AGG | + | chr3_2:52913866-52913885 | Msa0410940:intron | 30.0% | |
| ACCTAACATAAAGGAGATAA+AGG | + | chr3_2:52913894-52913913 | Msa0410940:CDS | 30.0% | |
| ACCTTTATCTCCTTTATGTT+AGG | - | chr3_2:52913898-52913917 | None:intergenic | 30.0% | |
| AGAATGCATGTGAATACATA+TGG | - | chr3_2:52914057-52914076 | None:intergenic | 30.0% | |
| ! | ACCCAACTCTGAAAAATTTA+AGG | + | chr3_2:52914237-52914256 | Msa0410940:three_prime_UTR | 30.0% |
| !! | CTCCTTAAATTTTTCAGAGT+TGG | - | chr3_2:52914242-52914261 | None:intergenic | 30.0% |
| ! | CTCTGAAAAATTTAAGGAGT+AGG | + | chr3_2:52914243-52914262 | Msa0410940:three_prime_UTR | 30.0% |
| TAGAGGAAGAAGAAAAGCTT+TGG | - | chr3_2:52910006-52910025 | None:intergenic | 35.0% | |
| AAGCTATCATAGAGAGCTTA+TGG | - | chr3_2:52910401-52910420 | None:intergenic | 35.0% | |
| AAGCTCTCTATGATAGCTTA+TGG | + | chr3_2:52910402-52910421 | Msa0410940:intron | 35.0% | |
| AGCTTATGGAAACAGCTTAT+AGG | + | chr3_2:52910416-52910435 | Msa0410940:intron | 35.0% | |
| GCTTATGGAAACAGCTTATA+GGG | + | chr3_2:52910417-52910436 | Msa0410940:intron | 35.0% | |
| ATATAGACTATGGGTCTGTT+TGG | - | chr3_2:52910647-52910666 | None:intergenic | 35.0% | |
| TGGTTTGATGAACTTAGTGA+CGG | + | chr3_2:52910851-52910870 | Msa0410940:intron | 35.0% | |
| CACCTTATACGTACACAAAT+TGG | - | chr3_2:52910951-52910970 | None:intergenic | 35.0% | |
| CAATTTGTGTACGTATAAGG+TGG | + | chr3_2:52910949-52910968 | Msa0410940:intron | 35.0% | |
| ! | GTGATACTGATTATCTGGTA+AGG | + | chr3_2:52911138-52911157 | Msa0410940:intron | 35.0% |
| ! | TACTGATTATCTGGTAAGGA+TGG | + | chr3_2:52911142-52911161 | Msa0410940:intron | 35.0% |
| GGTAAGGATGGTTATTATTG+AGG | + | chr3_2:52911154-52911173 | Msa0410940:intron | 35.0% | |
| !! | TTGAGGCAATTGATTTGGAA+TGG | + | chr3_2:52911171-52911190 | Msa0410940:intron | 35.0% |
| CACTATTCTGATTCCATTAC+AGG | + | chr3_2:52911288-52911307 | Msa0410940:intron | 35.0% | |
| CTATTCTGATTCCATTACAG+GGG | + | chr3_2:52911290-52911309 | Msa0410940:intron | 35.0% | |
| TATTCTGATTCCATTACAGG+GGG | + | chr3_2:52911291-52911310 | Msa0410940:intron | 35.0% | |
| AGCAAAAGTAGGTCAAAGAA+AGG | + | chr3_2:52911498-52911517 | Msa0410940:intron | 35.0% | |
| TTTGCTTCTATTAAGGCCAT+AGG | + | chr3_2:52911575-52911594 | Msa0410940:intron | 35.0% | |
| TTGCTTCTATTAAGGCCATA+GGG | + | chr3_2:52911576-52911595 | Msa0410940:intron | 35.0% | |
| AGCAAACTATTTAGTCCCTA+TGG | - | chr3_2:52911594-52911613 | None:intergenic | 35.0% | |
| !! | AGGGACTAAATAGTTTGCTT+AGG | + | chr3_2:52911595-52911614 | Msa0410940:intron | 35.0% |
| ! | CATTTTTCATGCTTGTGCTT+AGG | + | chr3_2:52911641-52911660 | Msa0410940:intron | 35.0% |
| TTTACTTTCATAGGCTCTCT+AGG | + | chr3_2:52911812-52911831 | Msa0410940:intron | 35.0% | |
| CAACAATCTCAGCTTAATTG+TGG | + | chr3_2:52911880-52911899 | Msa0410940:intron | 35.0% | |
| GGACTTAAATTTAGCATGCT+TGG | + | chr3_2:52911929-52911948 | Msa0410940:intron | 35.0% | |
| TTTCTTGGAATTGGTTGCAT+TGG | + | chr3_2:52912060-52912079 | Msa0410940:intron | 35.0% | |
| TAGACTGCACAATGATAGTA+TGG | + | chr3_2:52912165-52912184 | Msa0410940:intron | 35.0% | |
| !! | GATATTGGGTTGATTATTGG+TGG | + | chr3_2:52912316-52912335 | Msa0410940:intron | 35.0% |
| ! | CAAGTTGGGATAATCTCTTA+GGG | + | chr3_2:52912635-52912654 | Msa0410940:intron | 35.0% |
| ! | GATTTTAGACAAAGAAGCAG+TGG | + | chr3_2:52913016-52913035 | Msa0410940:intron | 35.0% |
| TTATATTGTGCAGCTCAAAG+TGG | + | chr3_2:52913082-52913101 | Msa0410940:CDS | 35.0% | |
| ACACTACATTCAGACTTAGA+AGG | + | chr3_2:52913282-52913301 | Msa0410940:CDS | 35.0% | |
| TACATTCAGACTTAGAAGGA+TGG | + | chr3_2:52913286-52913305 | Msa0410940:CDS | 35.0% | |
| TGGAAGGTAATACTTACAGT+GGG | - | chr3_2:52913340-52913359 | None:intergenic | 35.0% | |
| ATGGAAGGTAATACTTACAG+TGG | - | chr3_2:52913341-52913360 | None:intergenic | 35.0% | |
| ! | AAGGAGGGTGTAGTTAAAAT+AGG | + | chr3_2:52913506-52913525 | Msa0410940:intron | 35.0% |
| CAGGTATTCACCTAACATAA+AGG | + | chr3_2:52913885-52913904 | Msa0410940:intron | 35.0% | |
| ACACTATCCTTTCCAAAACA+CGG | - | chr3_2:52914177-52914196 | None:intergenic | 35.0% | |
| TTACGGTGGAGAAAGAGATT+TGG | - | chr3_2:52910127-52910146 | None:intergenic | 40.0% | |
| !! | GGTTCTTTTCGATTCGATTG+AGG | + | chr3_2:52910286-52910305 | Msa0410940:intron | 40.0% |
| GAGAGCTTATGGAAATAAGC+TGG | - | chr3_2:52910390-52910409 | None:intergenic | 40.0% | |
| GGTTTGATGAACTTAGTGAC+GGG | + | chr3_2:52910852-52910871 | Msa0410940:intron | 40.0% | |
| TTCACACTGAAAACTAGTGC+AGG | + | chr3_2:52910904-52910923 | Msa0410940:intron | 40.0% | |
| GGCCAATTTGTGTACGTATA+AGG | + | chr3_2:52910946-52910965 | Msa0410940:intron | 40.0% | |
| ! | ATAAGGTGGAGAGGTATATG+TGG | + | chr3_2:52910963-52910982 | Msa0410940:intron | 40.0% |
| TGATCATGAATGAGGATGAG+AGG | + | chr3_2:52911029-52911048 | Msa0410940:intron | 40.0% | |
| AACAAGAATGTGATCTGTGG+TGG | - | chr3_2:52911235-52911254 | None:intergenic | 40.0% | |
| ACCACAGATCACATTCTTGT+TGG | + | chr3_2:52911234-52911253 | Msa0410940:intron | 40.0% | |
| TCCAACAAGAATGTGATCTG+TGG | - | chr3_2:52911238-52911257 | None:intergenic | 40.0% | |
| AGTGCAACATCAGTTGATCT+AGG | - | chr3_2:52911272-52911291 | None:intergenic | 40.0% | |
| ! | ATCTGGGATATGAGTCTGAT+TGG | + | chr3_2:52911690-52911709 | Msa0410940:intron | 40.0% |
| TTGCCTGTTTGTGGTCTATT+TGG | + | chr3_2:52911958-52911977 | Msa0410940:intron | 40.0% | |
| CTTCCAAATAGACCACAAAC+AGG | - | chr3_2:52911964-52911983 | None:intergenic | 40.0% | |
| CTGTTTGTGGTCTATTTGGA+AGG | + | chr3_2:52911962-52911981 | Msa0410940:intron | 40.0% | |
| TGGAATTGGTTGCATTGGAA+AGG | + | chr3_2:52912065-52912084 | Msa0410940:intron | 40.0% | |
| CAATGATAGTATGGCATGCA+TGG | + | chr3_2:52912174-52912193 | Msa0410940:intron | 40.0% | |
| !!! | GTCTGATTTTTGCTGTTGTC+AGG | + | chr3_2:52912222-52912241 | Msa0410940:intron | 40.0% |
| !! | GCGGATATTGGGTTGATTAT+TGG | + | chr3_2:52912313-52912332 | Msa0410940:intron | 40.0% |
| ATTGGTGGAATTAGTGTCAG+TGG | + | chr3_2:52912331-52912350 | Msa0410940:intron | 40.0% | |
| TTGGTGGAATTAGTGTCAGT+GGG | + | chr3_2:52912332-52912351 | Msa0410940:intron | 40.0% | |
| TATCTGCATACTGTCTTAGC+AGG | + | chr3_2:52912481-52912500 | Msa0410940:intron | 40.0% | |
| CCTAAGAGATTATCCCAACT+TGG | - | chr3_2:52912637-52912656 | None:intergenic | 40.0% | |
| ! | CCAAGTTGGGATAATCTCTT+AGG | + | chr3_2:52912634-52912653 | Msa0410940:intron | 40.0% |
| ATTACCAGACTCATCTCTAG+AGG | - | chr3_2:52912722-52912741 | None:intergenic | 40.0% | |
| TCTAGAGATGAGTCTGGTAA+TGG | + | chr3_2:52912721-52912740 | Msa0410940:CDS | 40.0% | |
| ATGCTGAAATGAAGGCAATC+TGG | - | chr3_2:52912752-52912771 | None:intergenic | 40.0% | |
| AGATTGCCTTCATTTCAGCA+TGG | + | chr3_2:52912751-52912770 | Msa0410940:CDS | 40.0% | |
| ACAGAACCATGCTGAAATGA+AGG | - | chr3_2:52912760-52912779 | None:intergenic | 40.0% | |
| TAAACCTGCTTCGGAAATGA+GGG | - | chr3_2:52912789-52912808 | None:intergenic | 40.0% | |
| ATAAACCTGCTTCGGAAATG+AGG | - | chr3_2:52912790-52912809 | None:intergenic | 40.0% | |
| AGAGATTAGATAAAACCGCG+AGG | + | chr3_2:52912890-52912909 | Msa0410940:intron | 40.0% | |
| TTTAGACAAAGAAGCAGTGG+AGG | + | chr3_2:52913019-52913038 | Msa0410940:intron | 40.0% | |
| TTGAGCTGCACAATATAACC+AGG | - | chr3_2:52913080-52913099 | None:intergenic | 40.0% | |
| GTTATTGCAAGGCGTAATTG+TGG | + | chr3_2:52913254-52913273 | Msa0410940:CDS | 40.0% | |
| AACTCGAGTCAACAAAACTC+CGG | - | chr3_2:52913400-52913419 | None:intergenic | 40.0% | |
| ! | CAATGTGCGTTTTGTGTACA+TGG | + | chr3_2:52913759-52913778 | Msa0410940:intron | 40.0% |
| CAACACAAAACGCATTGAAC+TGG | - | chr3_2:52913788-52913807 | None:intergenic | 40.0% | |
| ! | GAGCATTCATTTTATCCCTC+AGG | - | chr3_2:52913960-52913979 | None:intergenic | 40.0% |
| ! | CTTTAGATCATGCCGTGTTT+TGG | + | chr3_2:52914162-52914181 | Msa0410940:three_prime_UTR | 40.0% |
| TCCTCTATACGAAACAGCCA+TGG | + | chr3_2:52910019-52910038 | Msa0410940:exon | 45.0% | |
| AAGAGCGAGTGAGAGATGAA+CGG | - | chr3_2:52910073-52910092 | None:intergenic | 45.0% | |
| ATCTCTCACTCGCTCTTCAT+CGG | + | chr3_2:52910076-52910095 | Msa0410940:CDS | 45.0% | |
| !! | TGAAGTGAAAGTGCTTACGG+TGG | - | chr3_2:52910141-52910160 | None:intergenic | 45.0% |
| GACTATGGGTCTGTTTGGAA+TGG | - | chr3_2:52910642-52910661 | None:intergenic | 45.0% | |
| GTAGCATAAAGGTGACTGTC+TGG | + | chr3_2:52910730-52910749 | Msa0410940:intron | 45.0% | |
| CACTGAAAACTAGTGCAGGA+AGG | + | chr3_2:52910908-52910927 | Msa0410940:intron | 45.0% | |
| ! | AGTGCAGGAAGGTGTATGTT+TGG | + | chr3_2:52910919-52910938 | Msa0410940:intron | 45.0% |
| ! | GGAAGGTGTATGTTTGGCAT+TGG | + | chr3_2:52910925-52910944 | Msa0410940:intron | 45.0% |
| TGTGTACGTATAAGGTGGAG+AGG | + | chr3_2:52910954-52910973 | Msa0410940:intron | 45.0% | |
| ! | GCAGGGTGATACTGATTATC+TGG | + | chr3_2:52911133-52911152 | Msa0410940:intron | 45.0% |
| TGGTTGCATTGGAAAGGAAC+TGG | + | chr3_2:52912071-52912090 | Msa0410940:intron | 45.0% | |
| GGTCTGGTATTGCGGATATT+GGG | + | chr3_2:52912302-52912321 | Msa0410940:intron | 45.0% | |
| TGGTGGAATTAGTGTCAGTG+GGG | + | chr3_2:52912333-52912352 | Msa0410940:intron | 45.0% | |
| CTTCATGATCCAGTGAAACC+CGG | + | chr3_2:52912398-52912417 | Msa0410940:intron | 45.0% | |
| TCCAGTGAAACCCGGTTATT+AGG | + | chr3_2:52912406-52912425 | Msa0410940:intron | 45.0% | |
| CTAGAGGATACATTCGTCTG+AGG | - | chr3_2:52912706-52912725 | None:intergenic | 45.0% | |
| ! | GTATCCTCTAGAGATGAGTC+TGG | + | chr3_2:52912715-52912734 | Msa0410940:CDS | 45.0% |
| CGGTAGACATAAACCTGCTT+CGG | - | chr3_2:52912798-52912817 | None:intergenic | 45.0% | |
| ! | AGGCAATTCAGGTTCTGGTA+AGG | - | chr3_2:52912854-52912873 | None:intergenic | 45.0% |
| CTCTTAAATTTGATGCGGGG+AGG | - | chr3_2:52912874-52912893 | None:intergenic | 45.0% | |
| ! | GAGGTACCTGATATAAAGCC+TGG | + | chr3_2:52913059-52913078 | Msa0410940:CDS | 45.0% |
| AGACTTAGAAGGATGGTAGC+TGG | + | chr3_2:52913293-52913312 | Msa0410940:CDS | 45.0% | |
| GACTTAGAAGGATGGTAGCT+GGG | + | chr3_2:52913294-52913313 | Msa0410940:CDS | 45.0% | |
| ACTTAGAAGGATGGTAGCTG+GGG | + | chr3_2:52913295-52913314 | Msa0410940:CDS | 45.0% | |
| AGCCAAACTCTACTACCTGA+GGG | + | chr3_2:52913942-52913961 | Msa0410940:CDS | 45.0% | |
| ATCCCTCAGGTAGTAGAGTT+TGG | - | chr3_2:52913947-52913966 | None:intergenic | 45.0% | |
| ACAGGCTGAAGATTAGTGTC+AGG | - | chr3_2:52913993-52914012 | None:intergenic | 45.0% | |
| GACACTAATCTTCAGCCTGT+TGG | + | chr3_2:52913993-52914012 | Msa0410940:three_prime_UTR | 45.0% | |
| !!! | GATCATGCCGTGTTTTGGAA+AGG | + | chr3_2:52914167-52914186 | Msa0410940:three_prime_UTR | 45.0% |
| ! | GCCATGGCTGTTTCGTATAG+AGG | - | chr3_2:52910023-52910042 | None:intergenic | 50.0% |
| GAAGAGTCTTCGTGAAGCCA+TGG | - | chr3_2:52910039-52910058 | None:intergenic | 50.0% | |
| GAGATTTGGCGGAGATACGT+CGG | - | chr3_2:52910113-52910132 | None:intergenic | 50.0% | |
| CGGTGGAGAAAGAGATTTGG+CGG | - | chr3_2:52910124-52910143 | None:intergenic | 50.0% | |
| !! | TGAACTTAGTGACGGGTGCA+TGG | + | chr3_2:52910859-52910878 | Msa0410940:intron | 50.0% |
| ! | AGGTGGAGAGGTATATGTGG+TGG | + | chr3_2:52910966-52910985 | Msa0410940:intron | 50.0% |
| !! | TGGTAGTGGTACTTGAGTGC+AGG | + | chr3_2:52911115-52911134 | Msa0410940:intron | 50.0% |
| ! | GGTAGTGGTACTTGAGTGCA+GGG | + | chr3_2:52911116-52911135 | Msa0410940:intron | 50.0% |
| AGACATTGGACCCCCTGTAA+TGG | - | chr3_2:52911304-52911323 | None:intergenic | 50.0% | |
| ! | TGGGTTTGCTTGCCTGTTTG+TGG | + | chr3_2:52911949-52911968 | Msa0410940:intron | 50.0% |
| CTCTTGCTTCGTCTACGCAT+CGG | + | chr3_2:52912129-52912148 | Msa0410940:intron | 50.0% | |
| !! | GTCCACAGTTCTGGTTTGTG+TGG | + | chr3_2:52912246-52912265 | Msa0410940:intron | 50.0% |
| GTCCACACAAACCAGAACTG+TGG | - | chr3_2:52912251-52912270 | None:intergenic | 50.0% | |
| !! | CAGTTCTGGTTTGTGTGGAC+AGG | + | chr3_2:52912251-52912270 | Msa0410940:intron | 50.0% |
| TTCAGGTGCTAAGCAGAGCT+GGG | + | chr3_2:52912281-52912300 | Msa0410940:intron | 50.0% | |
| GGGTCTGGTATTGCGGATAT+TGG | + | chr3_2:52912301-52912320 | Msa0410940:intron | 50.0% | |
| GCCTAATAACCGGGTTTCAC+TGG | - | chr3_2:52912410-52912429 | None:intergenic | 50.0% | |
| ! | CTTAGCAGGCTGTGTCCTTT+TGG | + | chr3_2:52912495-52912514 | Msa0410940:intron | 50.0% |
| ! | AGGCTGTGTCCTTTTGGTCT+GGG | + | chr3_2:52912501-52912520 | Msa0410940:intron | 50.0% |
| ! | GGGGGTTTGGCATTTTTCGT+TGG | + | chr3_2:52912521-52912540 | Msa0410940:intron | 50.0% |
| TTGTCCCTCATTTCCGAAGC+AGG | + | chr3_2:52912782-52912801 | Msa0410940:CDS | 50.0% | |
| AGACAAAGAAGCAGTGGAGG+AGG | + | chr3_2:52913022-52913041 | Msa0410940:intron | 50.0% | |
| GGAGGTGAAAGAACAGAGAG+AGG | + | chr3_2:52913040-52913059 | Msa0410940:CDS | 50.0% | |
| !! | AGGAAGTACCGGAGAACAAG+AGG | + | chr3_2:52913207-52913226 | Msa0410940:intron | 50.0% |
| GAAACACGCCTCTTGTTCTC+CGG | - | chr3_2:52913218-52913237 | None:intergenic | 50.0% | |
| CTGCTTGTAACTCTGCACCT+TGG | + | chr3_2:52913374-52913393 | Msa0410940:intron | 50.0% | |
| TTGTAACTCTGCACCTTGGC+CGG | + | chr3_2:52913378-52913397 | Msa0410940:intron | 50.0% | |
| AGTCAACAAAACTCCGGCCA+AGG | - | chr3_2:52913394-52913413 | None:intergenic | 50.0% | |
| GAGCCAAACTCTACTACCTG+AGG | + | chr3_2:52913941-52913960 | Msa0410940:CDS | 50.0% | |
| GCGTAGACGAAGCAAGAGGA+TGG | - | chr3_2:52912127-52912146 | None:intergenic | 55.0% | |
| CGATGCGTAGACGAAGCAAG+AGG | - | chr3_2:52912131-52912150 | None:intergenic | 55.0% | |
| TTGCTTCGTCTACGCATCGG+TGG | + | chr3_2:52912132-52912151 | Msa0410940:intron | 55.0% | |
| TTGTCAGGCGTCCACAGTTC+TGG | + | chr3_2:52912237-52912256 | Msa0410940:intron | 55.0% | |
| ! | CTGGTTTGTGTGGACAGGTC+AGG | + | chr3_2:52912256-52912275 | Msa0410940:intron | 55.0% |
| TGTGGACAGGTCAGGACTTC+AGG | + | chr3_2:52912264-52912283 | Msa0410940:intron | 55.0% | |
| CTTCAGGTGCTAAGCAGAGC+TGG | + | chr3_2:52912280-52912299 | Msa0410940:intron | 55.0% | |
| CAGAGCTGGGTCTGGTATTG+CGG | + | chr3_2:52912294-52912313 | Msa0410940:intron | 55.0% | |
| GGAATTAGTGTCAGTGGGGC+AGG | + | chr3_2:52912337-52912356 | Msa0410940:intron | 55.0% | |
| ! | CAGGCTGTGTCCTTTTGGTC+TGG | + | chr3_2:52912500-52912519 | Msa0410940:intron | 55.0% |
| ! | GGCTGTGTCCTTTTGGTCTG+GGG | + | chr3_2:52912502-52912521 | Msa0410940:intron | 55.0% |
| ! | GCTGTGTCCTTTTGGTCTGG+GGG | + | chr3_2:52912503-52912522 | Msa0410940:intron | 55.0% |
| ! | GTCCTTTTGGTCTGGGGGTT+TGG | + | chr3_2:52912508-52912527 | Msa0410940:intron | 55.0% |
| TGCCAAACCCCCAGACCAAA+AGG | - | chr3_2:52912513-52912532 | None:intergenic | 55.0% | |
| TTGATGCGGGGAGGCAATTC+AGG | - | chr3_2:52912865-52912884 | None:intergenic | 55.0% | |
| AACCGCGAGGCACATTATGC+AGG | + | chr3_2:52912903-52912922 | Msa0410940:intron | 55.0% | |
| TGCCTGCATAATGTGCCTCG+CGG | - | chr3_2:52912908-52912927 | None:intergenic | 55.0% | |
| AGAAGGATGGTAGCTGGGGT+TGG | + | chr3_2:52913299-52913318 | Msa0410940:CDS | 55.0% | |
| GAAGGATGGTAGCTGGGGTT+GGG | + | chr3_2:52913300-52913319 | Msa0410940:CDS | 55.0% | |
| GTGCTAAGCAGAGCTGGGTC+TGG | + | chr3_2:52912286-52912305 | Msa0410940:intron | 60.0% | |
| ! | CGGGGAGGCAATTCAGGTTC+TGG | - | chr3_2:52912859-52912878 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 52909998 | 52914275 | 52909998 | ID=Msa0410940;Name=Msa0410940 |
| chr3_2 | mRNA | 52909998 | 52914275 | 52909998 | ID=Msa0410940-mRNA-1;Parent=Msa0410940;Name=Msa0410940-mRNA-1;_AED=0.12;_eAED=0.12;_QI=40|0.75|0.6|1|0.5|0.8|5|288|191 |
| chr3_2 | exon | 52909998 | 52910142 | 52909998 | ID=Msa0410940-mRNA-1:exon:10517;Parent=Msa0410940-mRNA-1 |
| chr3_2 | exon | 52912691 | 52912847 | 52912691 | ID=Msa0410940-mRNA-1:exon:10518;Parent=Msa0410940-mRNA-1 |
| chr3_2 | exon | 52913024 | 52913103 | 52913024 | ID=Msa0410940-mRNA-1:exon:10519;Parent=Msa0410940-mRNA-1 |
| chr3_2 | exon | 52913209 | 52913342 | 52913209 | ID=Msa0410940-mRNA-1:exon:10520;Parent=Msa0410940-mRNA-1 |
| chr3_2 | exon | 52913888 | 52914275 | 52913888 | ID=Msa0410940-mRNA-1:exon:10521;Parent=Msa0410940-mRNA-1 |
| chr3_2 | five_prime_UTR | 52909998 | 52910037 | 52909998 | ID=Msa0410940-mRNA-1:five_prime_utr;Parent=Msa0410940-mRNA-1 |
| chr3_2 | CDS | 52910038 | 52910142 | 52910038 | ID=Msa0410940-mRNA-1:cds;Parent=Msa0410940-mRNA-1 |
| chr3_2 | CDS | 52912691 | 52912847 | 52912691 | ID=Msa0410940-mRNA-1:cds;Parent=Msa0410940-mRNA-1 |
| chr3_2 | CDS | 52913024 | 52913103 | 52913024 | ID=Msa0410940-mRNA-1:cds;Parent=Msa0410940-mRNA-1 |
| chr3_2 | CDS | 52913209 | 52913342 | 52913209 | ID=Msa0410940-mRNA-1:cds;Parent=Msa0410940-mRNA-1 |
| chr3_2 | CDS | 52913888 | 52913987 | 52913888 | ID=Msa0410940-mRNA-1:cds;Parent=Msa0410940-mRNA-1 |
| chr3_2 | three_prime_UTR | 52913988 | 52914275 | 52913988 | ID=Msa0410940-mRNA-1:three_prime_utr;Parent=Msa0410940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
