Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465700 | XP_013444548.1 | 98.148 | 108 | 2 | 0 | 1 | 108 | 1 | 108 | 1.08e-68 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465700 | sp|O23095|RLA12_ARATH | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 3.01e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465700 | I3S0D9 | 98.148 | 108 | 2 | 0 | 1 | 108 | 1 | 108 | 5.16e-69 | 211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1465700 | 0.874582 | 6.034376e-68 | -8.615850e-47 |
| Msa0002430 | Msa1465700 | 0.811105 | 8.266527e-51 | -8.615850e-47 |
| Msa0003330 | Msa1465700 | 0.881325 | 2.636078e-70 | -8.615850e-47 |
| Msa0027590 | Msa1465700 | 0.895248 | 1.147252e-75 | -8.615850e-47 |
| Msa0027610 | Msa1465700 | -0.818809 | 1.614985e-52 | -8.615850e-47 |
| Msa0037230 | Msa1465700 | 0.817768 | 2.778552e-52 | -8.615850e-47 |
| Msa0042510 | Msa1465700 | 0.848452 | 6.074427e-60 | -8.615850e-47 |
| Msa0071760 | Msa1465700 | 0.807676 | 4.499800e-50 | -8.615850e-47 |
| Msa0072570 | Msa1465700 | 0.815879 | 7.373935e-52 | -8.615850e-47 |
| Msa0075350 | Msa1465700 | 0.841150 | 5.658332e-58 | -8.615850e-47 |
| Msa0075370 | Msa1465700 | -0.804308 | 2.299548e-49 | -8.615850e-47 |
| Msa0079560 | Msa1465700 | 0.840669 | 7.566929e-58 | -8.615850e-47 |
| Msa0089540 | Msa1465700 | 0.815282 | 1.001458e-51 | -8.615850e-47 |
| Msa0094210 | Msa1465700 | 0.803666 | 3.126726e-49 | -8.615850e-47 |
| Msa0098210 | Msa1465700 | 0.813117 | 3.011026e-51 | -8.615850e-47 |
| Msa0114600 | Msa1465700 | 0.805151 | 1.533310e-49 | -8.615850e-47 |
| Msa1351020 | Msa1465700 | 0.881435 | 2.406788e-70 | -8.615850e-47 |
| Msa1353300 | Msa1465700 | 0.815783 | 7.745439e-52 | -8.615850e-47 |
| Msa1358710 | Msa1465700 | 0.831569 | 1.549718e-55 | -8.615850e-47 |
| Msa1363910 | Msa1465700 | 0.820137 | 8.040200e-53 | -8.615850e-47 |
| Msa1371410 | Msa1465700 | 0.834423 | 3.023373e-56 | -8.615850e-47 |
| Msa1385480 | Msa1465700 | 0.882753 | 7.993615e-71 | -8.615850e-47 |
| Msa1387750 | Msa1465700 | 0.859433 | 4.149627e-63 | -8.615850e-47 |
| Msa1390760 | Msa1465700 | 0.888444 | 5.874645e-73 | -8.615850e-47 |
| Msa1403520 | Msa1465700 | 0.800425 | 1.449890e-48 | -8.615850e-47 |
| Msa1407550 | Msa1465700 | 0.916065 | 2.787563e-85 | -8.615850e-47 |
| Msa1413570 | Msa1465700 | 0.856076 | 4.108938e-62 | -8.615850e-47 |
| Msa1415620 | Msa1465700 | 0.831777 | 1.377280e-55 | -8.615850e-47 |
| Msa1421510 | Msa1465700 | 0.848662 | 5.312612e-60 | -8.615850e-47 |
| Msa1423050 | Msa1465700 | 0.829782 | 4.245860e-55 | -8.615850e-47 |
| Msa1425070 | Msa1465700 | 0.844320 | 8.133882e-59 | -8.615850e-47 |
| Msa1432310 | Msa1465700 | 0.854169 | 1.472318e-61 | -8.615850e-47 |
| Msa1433910 | Msa1465700 | 0.802370 | 5.794568e-49 | -8.615850e-47 |
| Msa1441220 | Msa1465700 | -0.822905 | 1.844259e-53 | -8.615850e-47 |
| Msa1446410 | Msa1465700 | 0.819765 | 9.778031e-53 | -8.615850e-47 |
| Msa1450560 | Msa1465700 | 0.859942 | 2.916535e-63 | -8.615850e-47 |
| Msa1453380 | Msa1465700 | 0.833320 | 5.707788e-56 | -8.615850e-47 |
| Msa1453530 | Msa1465700 | 0.873266 | 1.679934e-67 | -8.615850e-47 |
| Msa1456160 | Msa1465700 | 0.804388 | 2.212135e-49 | -8.615850e-47 |
| Msa1463570 | Msa1465700 | 0.848932 | 4.471796e-60 | -8.615850e-47 |
| Msa0602900 | Msa1465700 | 0.902367 | 1.042457e-78 | -8.615850e-47 |
| Msa0605600 | Msa1465700 | 0.838191 | 3.329890e-57 | -8.615850e-47 |
| Msa0605890 | Msa1465700 | 0.863675 | 2.101491e-64 | -8.615850e-47 |
| Msa0609120 | Msa1465700 | 0.830208 | 3.343244e-55 | -8.615850e-47 |
| Msa0610000 | Msa1465700 | 0.808109 | 3.640529e-50 | -8.615850e-47 |
| Msa0619230 | Msa1465700 | 0.888124 | 7.798122e-73 | -8.615850e-47 |
| Msa0621190 | Msa1465700 | 0.872301 | 3.532572e-67 | -8.615850e-47 |
| Msa0643960 | Msa1465700 | 0.901322 | 3.013985e-78 | -8.615850e-47 |
| Msa0648670 | Msa1465700 | 0.812142 | 4.919822e-51 | -8.615850e-47 |
| Msa0649890 | Msa1465700 | 0.827577 | 1.449153e-54 | -8.615850e-47 |
| Msa0656450 | Msa1465700 | 0.854631 | 1.082360e-61 | -8.615850e-47 |
| Msa0686550 | Msa1465700 | 0.847514 | 1.102274e-59 | -8.615850e-47 |
| Msa0691760 | Msa1465700 | 0.861077 | 1.321735e-63 | -8.615850e-47 |
| Msa0694400 | Msa1465700 | 0.896669 | 2.954366e-76 | -8.615850e-47 |
| Msa0700370 | Msa1465700 | 0.845745 | 3.351805e-59 | -8.615850e-47 |
| Msa0704860 | Msa1465700 | 0.812657 | 3.796876e-51 | -8.615850e-47 |
| Msa0708630 | Msa1465700 | 0.865538 | 5.492549e-65 | -8.615850e-47 |
| Msa0741510 | Msa1465700 | 0.805351 | 1.392169e-49 | -8.615850e-47 |
| Msa0748350 | Msa1465700 | 0.830500 | 2.836320e-55 | -8.615850e-47 |
| Msa0758420 | Msa1465700 | 0.801277 | 9.716007e-49 | -8.615850e-47 |
| Msa0788380 | Msa1465700 | 0.827865 | 1.235434e-54 | -8.615850e-47 |
| Msa0790450 | Msa1465700 | 0.855369 | 6.607514e-62 | -8.615850e-47 |
| Msa0834220 | Msa1465700 | 0.898114 | 7.285830e-77 | -8.615850e-47 |
| Msa0123290 | Msa1465700 | 0.831132 | 1.985017e-55 | -8.615850e-47 |
| Msa0123310 | Msa1465700 | -0.819265 | 1.272074e-52 | -8.615850e-47 |
| Msa0127230 | Msa1465700 | 0.829310 | 5.530817e-55 | -8.615850e-47 |
| Msa0128330 | Msa1465700 | 0.846510 | 2.075934e-59 | -8.615850e-47 |
| Msa0132460 | Msa1465700 | 0.864736 | 9.813594e-65 | -8.615850e-47 |
| Msa0134580 | Msa1465700 | 0.835078 | 2.068745e-56 | -8.615850e-47 |
| Msa0136400 | Msa1465700 | 0.815492 | 8.991925e-52 | -8.615850e-47 |
| Msa0167800 | Msa1465700 | -0.828306 | 9.673404e-55 | -8.615850e-47 |
| Msa0167860 | Msa1465700 | 0.905997 | 2.374725e-80 | -8.615850e-47 |
| Msa0168320 | Msa1465700 | 0.869272 | 3.505639e-66 | -8.615850e-47 |
| Msa0174580 | Msa1465700 | 0.833242 | 5.969305e-56 | -8.615850e-47 |
| Msa0177940 | Msa1465700 | 0.812419 | 4.280226e-51 | -8.615850e-47 |
| Msa0182050 | Msa1465700 | 0.869937 | 2.128638e-66 | -8.615850e-47 |
| Msa0182100 | Msa1465700 | 0.893509 | 5.882644e-75 | -8.615850e-47 |
| Msa0183840 | Msa1465700 | 0.807656 | 4.544365e-50 | -8.615850e-47 |
| Msa0188740 | Msa1465700 | 0.848995 | 4.295270e-60 | -8.615850e-47 |
| Msa0191450 | Msa1465700 | 0.843477 | 1.367809e-58 | -8.615850e-47 |
| Msa0191550 | Msa1465700 | 0.851608 | 7.942874e-61 | -8.615850e-47 |
| Msa0192300 | Msa1465700 | 0.900969 | 4.300552e-78 | -8.615850e-47 |
| Msa0194940 | Msa1465700 | 0.804240 | 2.375284e-49 | -8.615850e-47 |
| Msa0195030 | Msa1465700 | 0.860652 | 1.778533e-63 | -8.615850e-47 |
| Msa0219090 | Msa1465700 | 0.811233 | 7.757822e-51 | -8.615850e-47 |
| Msa0233550 | Msa1465700 | 0.880888 | 3.786153e-70 | -8.615850e-47 |
| Msa0235050 | Msa1465700 | 0.811075 | 8.392173e-51 | -8.615850e-47 |
| Msa0237180 | Msa1465700 | 0.854586 | 1.115579e-61 | -8.615850e-47 |
| Msa1235950 | Msa1465700 | 0.985902 | 4.950955e-165 | -8.615850e-47 |
| Msa1235980 | Msa1465700 | 0.987904 | 5.672769e-172 | -8.615850e-47 |
| Msa1237040 | Msa1465700 | 0.900217 | 9.139254e-78 | -8.615850e-47 |
| Msa1240270 | Msa1465700 | 0.815563 | 8.672664e-52 | -8.615850e-47 |
| Msa1258540 | Msa1465700 | 0.849019 | 4.230013e-60 | -8.615850e-47 |
| Msa1266570 | Msa1465700 | -0.800210 | 1.603903e-48 | -8.615850e-47 |
| Msa1270640 | Msa1465700 | 0.823862 | 1.101852e-53 | -8.615850e-47 |
| Msa1270710 | Msa1465700 | 0.827286 | 1.701703e-54 | -8.615850e-47 |
| Msa1278130 | Msa1465700 | 0.819695 | 1.014757e-52 | -8.615850e-47 |
| Msa1284060 | Msa1465700 | 0.814836 | 1.257762e-51 | -8.615850e-47 |
| Msa1284800 | Msa1465700 | 0.830433 | 2.944974e-55 | -8.615850e-47 |
| Msa1316100 | Msa1465700 | 0.957255 | 4.214367e-115 | -8.615850e-47 |
| Msa1317390 | Msa1465700 | 0.931623 | 2.872626e-94 | -8.615850e-47 |
| Msa1329930 | Msa1465700 | 0.829866 | 4.049611e-55 | -8.615850e-47 |
| Msa1333370 | Msa1465700 | 0.834520 | 2.858488e-56 | -8.615850e-47 |
| Msa1341780 | Msa1465700 | 0.826910 | 2.092651e-54 | -8.615850e-47 |
| Msa1344160 | Msa1465700 | 0.826973 | 2.021355e-54 | -8.615850e-47 |
| Msa1344190 | Msa1465700 | 0.827771 | 1.301753e-54 | -8.615850e-47 |
| Msa0371490 | Msa1465700 | 0.880637 | 4.656877e-70 | -8.615850e-47 |
| Msa0376850 | Msa1465700 | 0.840924 | 6.484716e-58 | -8.615850e-47 |
| Msa0377370 | Msa1465700 | 0.858607 | 7.334951e-63 | -8.615850e-47 |
| Msa0377520 | Msa1465700 | 0.857293 | 1.800998e-62 | -8.615850e-47 |
| Msa0378620 | Msa1465700 | -0.826393 | 2.781070e-54 | -8.615850e-47 |
| Msa0378920 | Msa1465700 | -0.817688 | 2.896367e-52 | -8.615850e-47 |
| Msa0379530 | Msa1465700 | -0.812221 | 4.728442e-51 | -8.615850e-47 |
| Msa0382670 | Msa1465700 | 0.900645 | 5.952722e-78 | -8.615850e-47 |
| Msa0383690 | Msa1465700 | 0.804691 | 1.912781e-49 | -8.615850e-47 |
| Msa0387290 | Msa1465700 | 0.845446 | 4.041580e-59 | -8.615850e-47 |
| Msa0388520 | Msa1465700 | 0.810211 | 1.290141e-50 | -8.615850e-47 |
| Msa0404210 | Msa1465700 | -0.806537 | 7.841256e-50 | -8.615850e-47 |
| Msa0410940 | Msa1465700 | 0.825483 | 4.572999e-54 | -8.615850e-47 |
| Msa0416470 | Msa1465700 | 0.892912 | 1.024243e-74 | -8.615850e-47 |
| Msa0426090 | Msa1465700 | 0.865586 | 5.305012e-65 | -8.615850e-47 |
| Msa0426250 | Msa1465700 | 0.837501 | 5.007918e-57 | -8.615850e-47 |
| Msa0426940 | Msa1465700 | 0.800731 | 1.255856e-48 | -8.615850e-47 |
| Msa0428530 | Msa1465700 | -0.821396 | 4.127775e-53 | -8.615850e-47 |
| Msa0432260 | Msa1465700 | -0.816291 | 5.966367e-52 | -8.615850e-47 |
| Msa0432750 | Msa1465700 | 0.827801 | 1.280157e-54 | -8.615850e-47 |
| Msa0433010 | Msa1465700 | 0.813702 | 2.238754e-51 | -8.615850e-47 |
| Msa0436830 | Msa1465700 | -0.809036 | 2.307355e-50 | -8.615850e-47 |
| Msa0472480 | Msa1465700 | 0.872204 | 3.805346e-67 | -8.615850e-47 |
| Msa0474870 | Msa1465700 | -0.803502 | 3.381130e-49 | -8.615850e-47 |
| Msa0475390 | Msa1465700 | -0.804863 | 1.761467e-49 | -8.615850e-47 |
| Msa0476730 | Msa1465700 | -0.809109 | 2.225718e-50 | -8.615850e-47 |
| Msa0479980 | Msa1465700 | 0.830061 | 3.629305e-55 | -8.615850e-47 |
| Msa0481520 | Msa1465700 | 0.838347 | 3.034563e-57 | -8.615850e-47 |
| Msa0979820 | Msa1465700 | 0.851780 | 7.101773e-61 | -8.615850e-47 |
| Msa1019110 | Msa1465700 | 0.816934 | 4.280508e-52 | -8.615850e-47 |
| Msa1025220 | Msa1465700 | 0.813173 | 2.925968e-51 | -8.615850e-47 |
| Msa1040160 | Msa1465700 | 0.800428 | 1.448178e-48 | -8.615850e-47 |
| Msa1041680 | Msa1465700 | 0.809777 | 1.600301e-50 | -8.615850e-47 |
| Msa1047020 | Msa1465700 | 0.818540 | 1.858550e-52 | -8.615850e-47 |
| Msa1054280 | Msa1465700 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa1082050 | Msa1465700 | 0.869450 | 3.069193e-66 | -8.615850e-47 |
| Msa1083370 | Msa1465700 | 0.815690 | 8.124920e-52 | -8.615850e-47 |
| Msa1085850 | Msa1465700 | 0.837167 | 6.096886e-57 | -8.615850e-47 |
| Msa0239420 | Msa1465700 | 0.893306 | 7.104507e-75 | -8.615850e-47 |
| Msa0256350 | Msa1465700 | 0.807466 | 4.987023e-50 | -8.615850e-47 |
| Msa0270160 | Msa1465700 | 0.832992 | 6.886361e-56 | -8.615850e-47 |
| Msa0274940 | Msa1465700 | 0.857912 | 1.181277e-62 | -8.615850e-47 |
| Msa0277600 | Msa1465700 | 0.869732 | 2.483798e-66 | -8.615850e-47 |
| Msa0278540 | Msa1465700 | 0.825169 | 5.426097e-54 | -8.615850e-47 |
| Msa0281330 | Msa1465700 | 0.833597 | 4.867984e-56 | -8.615850e-47 |
| Msa0281370 | Msa1465700 | 0.874596 | 5.969323e-68 | -8.615850e-47 |
| Msa0301250 | Msa1465700 | 0.912327 | 2.212337e-83 | -8.615850e-47 |
| Msa0313060 | Msa1465700 | 0.898850 | 3.538889e-77 | -8.615850e-47 |
| Msa0315430 | Msa1465700 | 0.870926 | 1.008692e-66 | -8.615850e-47 |
| Msa0315660 | Msa1465700 | 0.854806 | 9.630279e-62 | -8.615850e-47 |
| Msa0340560 | Msa1465700 | 0.869220 | 3.646381e-66 | -8.615850e-47 |
| Msa0346090 | Msa1465700 | 0.818965 | 1.488502e-52 | -8.615850e-47 |
| Msa0363320 | Msa1465700 | 0.824364 | 8.403007e-54 | -8.615850e-47 |
| Msa1116940 | Msa1465700 | 0.888708 | 4.646574e-73 | -8.615850e-47 |
| Msa1124980 | Msa1465700 | 0.835948 | 1.246267e-56 | -8.615850e-47 |
| Msa1126690 | Msa1465700 | 0.826031 | 3.390154e-54 | -8.615850e-47 |
| Msa1131030 | Msa1465700 | 0.828672 | 7.891635e-55 | -8.615850e-47 |
| Msa1136880 | Msa1465700 | 0.856199 | 3.780740e-62 | -8.615850e-47 |
| Msa1136980 | Msa1465700 | 0.826723 | 2.320183e-54 | -8.615850e-47 |
| Msa1156830 | Msa1465700 | 0.822152 | 2.759889e-53 | -8.615850e-47 |
| Msa1166570 | Msa1465700 | 0.809656 | 1.699003e-50 | -8.615850e-47 |
| Msa1167360 | Msa1465700 | 0.832417 | 9.568690e-56 | -8.615850e-47 |
| Msa1180000 | Msa1465700 | 0.848598 | 5.534184e-60 | -8.615850e-47 |
| Msa1186030 | Msa1465700 | 0.841439 | 4.747690e-58 | -8.615850e-47 |
| Msa1206240 | Msa1465700 | 0.819486 | 1.132601e-52 | -8.615850e-47 |
| Msa1213850 | Msa1465700 | 0.862666 | 4.310715e-64 | -8.615850e-47 |
| Msa1219760 | Msa1465700 | 0.824694 | 7.026790e-54 | -8.615850e-47 |
| Msa1221370 | Msa1465700 | -0.814000 | 1.925350e-51 | -8.615850e-47 |
| Msa0485220 | Msa1465700 | 0.872418 | 3.228793e-67 | -8.615850e-47 |
| Msa0488960 | Msa1465700 | 0.805234 | 1.473084e-49 | -8.615850e-47 |
| Msa0511760 | Msa1465700 | 0.889466 | 2.361607e-73 | -8.615850e-47 |
| Msa0516830 | Msa1465700 | 0.841850 | 3.700035e-58 | -8.615850e-47 |
| Msa0517480 | Msa1465700 | 0.845903 | 3.037556e-59 | -8.615850e-47 |
| Msa0521730 | Msa1465700 | 0.826126 | 3.219310e-54 | -8.615850e-47 |
| Msa0528820 | Msa1465700 | 0.812909 | 3.344474e-51 | -8.615850e-47 |
| Msa0547920 | Msa1465700 | 0.904948 | 7.196399e-80 | -8.615850e-47 |
| Msa0550490 | Msa1465700 | 0.810435 | 1.154168e-50 | -8.615850e-47 |
| Msa0573550 | Msa1465700 | 0.887684 | 1.149200e-72 | -8.615850e-47 |
| Msa0574780 | Msa1465700 | 0.908455 | 1.677885e-81 | -8.615850e-47 |
| Msa0578010 | Msa1465700 | 0.833276 | 5.853994e-56 | -8.615850e-47 |
| Msa0579830 | Msa1465700 | 0.812833 | 3.474002e-51 | -8.615850e-47 |
| Msa0597240 | Msa1465700 | 0.877451 | 6.218556e-69 | -8.615850e-47 |
| Msa0844380 | Msa1465700 | 0.803389 | 3.568958e-49 | -8.615850e-47 |
| Msa0880050 | Msa1465700 | 0.830152 | 3.449027e-55 | -8.615850e-47 |
| Msa0929680 | Msa1465700 | 0.876434 | 1.401112e-68 | -8.615850e-47 |
| Msa0929700 | Msa1465700 | 0.923464 | 2.565885e-89 | -8.615850e-47 |
| Msa0930360 | Msa1465700 | 0.860835 | 1.565472e-63 | -8.615850e-47 |
| Msa0930790 | Msa1465700 | 0.854986 | 8.538401e-62 | -8.615850e-47 |
| Msa0930890 | Msa1465700 | 0.874529 | 6.289272e-68 | -8.615850e-47 |
| Msa0943180 | Msa1465700 | 0.835684 | 1.454240e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465700 | MtrunA17_Chr8g0345951 | 98.148 | 108 | 2 | 0 | 1 | 108 | 1 | 108 | 9.94e-73 | 211 |
| Msa1465700 | MtrunA17_Chr3g0127831 | 60.000 | 110 | 42 | 1 | 1 | 108 | 1 | 110 | 3.73e-29 | 101 |
| Msa1465700 | MtrunA17_Chr2g0311301 | 60.909 | 110 | 41 | 1 | 1 | 108 | 1 | 110 | 3.73e-29 | 101 |
| Msa1465700 | MtrunA17_Chr4g0013621 | 57.273 | 110 | 45 | 1 | 1 | 108 | 1 | 110 | 4.65e-28 | 98.6 |
| Msa1465700 | MtrunA17_Chr7g0276131 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 1.21e-23 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465700 | AT5G24510.1 | 57.391 | 115 | 38 | 4 | 1 | 108 | 1 | 111 | 1.10e-37 | 123 |
| Msa1465700 | AT1G01100.3 | 51.402 | 107 | 39 | 1 | 2 | 108 | 3 | 96 | 7.32e-32 | 108 |
| Msa1465700 | AT4G00810.1 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 3.06e-31 | 107 |
| Msa1465700 | AT4G00810.2 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 3.06e-31 | 107 |
| Msa1465700 | AT1G01100.4 | 53.636 | 110 | 48 | 1 | 2 | 108 | 3 | 112 | 6.67e-31 | 106 |
| Msa1465700 | AT1G01100.1 | 53.636 | 110 | 48 | 1 | 2 | 108 | 3 | 112 | 6.67e-31 | 106 |
| Msa1465700 | AT1G01100.2 | 53.636 | 110 | 48 | 1 | 2 | 108 | 3 | 112 | 6.67e-31 | 106 |
| Msa1465700 | AT5G47700.1 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 9.74e-31 | 105 |
| Msa1465700 | AT5G47700.2 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 9.74e-31 | 105 |
Find 42 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAAAATGGTAGGAATTT+AGG | 0.193757 | tig0045425:+3535 | Msa1465700:intergenic |
| GTGGAGGCAGCAGCAGCAAC+TGG | 0.216487 | tig0045425:+2434 | Msa1465700:intergenic |
| GAGATCGAAGAAGAAGAATT+AGG | 0.222732 | tig0045425:+3499 | Msa1465700:intergenic |
| ACGTTAATGTTGAAGCTTAC+TGG | 0.234944 | tig0045425:-2550 | Msa1465700:CDS |
| TGGTGCTCCGGTTTCTGTTT+CGG | 0.321080 | tig0045425:-2459 | Msa1465700:CDS |
| AGATCGAAGAAGAAGAATTA+GGG | 0.332368 | tig0045425:+3500 | Msa1465700:intergenic |
| GTCGTCGTCACTCTCATCCT+TGG | 0.357062 | tig0045425:+2284 | Msa1465700:intergenic |
| ATCATCAAGGTTCTTCTTCT+CGG | 0.364681 | tig0045425:+2505 | Msa1465700:intergenic |
| GTTCCTGTGTGCCCTTGTAT+TGG | 0.370081 | tig0045425:-2016 | Msa1465700:three_prime_UTR |
| TCTTCGATCTCATTCCTTCA+AGG | 0.385991 | tig0045425:-3487 | Msa1465700:intron |
| TTTCCTACGCTGCTGCAAAA+TGG | 0.427986 | tig0045425:+3523 | Msa1465700:intergenic |
| AATACAAACATATACTTAGT+TGG | 0.430180 | tig0045425:-1978 | Msa1465700:three_prime_UTR |
| CGAAAAGTGGGTTACCTTGA+AGG | 0.447083 | tig0045425:+3473 | Msa1465700:intergenic |
| ACTGGGGCCGAAACAGAAAC+CGG | 0.462684 | tig0045425:+2452 | Msa1465700:intergenic |
| TCGTCGTCACTCTCATCCTT+GGG | 0.464875 | tig0045425:+2285 | Msa1465700:intergenic |
| TGCCGCTGGAGGTGGTGCTC+CGG | 0.491299 | tig0045425:-2471 | Msa1465700:CDS |
| ATATTGAATGCCGCTGGAGG+TGG | 0.496313 | tig0045425:-2479 | Msa1465700:CDS |
| GCAAGTTTAGCGAATAAACT+TGG | 0.520693 | tig0045425:+2527 | Msa1465700:intergenic |
| TGCTCCTATCGAGGAGAAGA+AGG | 0.520970 | tig0045425:-2402 | Msa1465700:intron |
| TTATCTTTGATAATTTGAGT+TGG | 0.538348 | tig0045425:-2085 | Msa1465700:three_prime_UTR |
| TGGAGGCAGCAGCAGCAACT+GGG | 0.544694 | tig0045425:+2435 | Msa1465700:intergenic |
| AGGAGCAGCAACTGCAGTGG+AGG | 0.545209 | tig0045425:+2418 | Msa1465700:intergenic |
| GGATGAGAGTGACGACGACA+TGG | 0.547177 | tig0045425:-2280 | Msa1465700:CDS |
| GTTTGCAGCTTTCAACAAAG+TGG | 0.560297 | tig0045425:+2571 | Msa1465700:intergenic |
| GTTAAGCAAACTCCAATACA+AGG | 0.570120 | tig0045425:+2004 | Msa1465700:intergenic |
| CTACGCTGCTGCAAAATGGT+AGG | 0.580550 | tig0045425:+3527 | Msa1465700:intergenic |
| GATTTGATATTGAATGCCGC+TGG | 0.580711 | tig0045425:-2485 | Msa1465700:CDS |
| AACCGGAGCACCACCTCCAG+CGG | 0.583475 | tig0045425:+2469 | Msa1465700:intergenic |
| CGGCGATGTTATCATCATGA+AGG | 0.588233 | tig0045425:+3286 | Msa1465700:intergenic |
| CATTCAATATCAAATCATCA+AGG | 0.592309 | tig0045425:+2492 | Msa1465700:intergenic |
| TGCAGTTGCTGCTCCTATCG+AGG | 0.607768 | tig0045425:-2411 | Msa1465700:CDS |
| GGAGGCAGCAGCAGCAACTG+GGG | 0.621755 | tig0045425:+2436 | Msa1465700:intergenic |
| CCTACCTTCTTCTCCTCGAT+AGG | 0.622145 | tig0045425:+2398 | Msa1465700:intergenic |
| GATAGGAGCAGCAACTGCAG+TGG | 0.632714 | tig0045425:+2415 | Msa1465700:intergenic |
| TGTAGTGTGAAAATGTCGAT+CGG | 0.636502 | tig0045425:-3339 | Msa1465700:intron |
| ACTCCAATACAAGGGCACAC+AGG | 0.641237 | tig0045425:+2013 | Msa1465700:intergenic |
| ATTATCAAAGGATACAGTGA+CGG | 0.653291 | tig0045425:+3266 | Msa1465700:intergenic |
| GATGAGAGTGACGACGACAT+GGG | 0.653294 | tig0045425:-2279 | Msa1465700:CDS |
| GTACTTACAGGAAGAACCCA+AGG | 0.654187 | tig0045425:-2301 | Msa1465700:intron |
| TTGATATTGAATGCCGCTGG+AGG | 0.659375 | tig0045425:-2482 | Msa1465700:CDS |
| GTAATGGGGTAGTTACTCAG+TGG | 0.696083 | tig0045425:-2199 | Msa1465700:three_prime_UTR |
| TTAAGCAAACTCCAATACAA+GGG | 0.712593 | tig0045425:+2005 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAACCTAATTTTTTTA+AGG | + | tig0045425:2632-2651 | Msa1465700:intergenic | 10.0% |
| !!! | AAAAAAATTAGGTTTTTTAA+AGG | - | tig0045425:2633-2652 | Msa1465700:intron | 10.0% |
| !!! | TAAAATCAATTTTTATATAG+TGG | - | tig0045425:2783-2802 | Msa1465700:intron | 10.0% |
| !!! | AAAATCAATTTTTATATAGT+GGG | - | tig0045425:2784-2803 | Msa1465700:intron | 10.0% |
| !!! | TAAAAAACCTAATTTTTTTA+AGG | + | tig0045425:2632-2651 | Msa1465700:intergenic | 10.0% |
| !!! | AAAAAAATTAGGTTTTTTAA+AGG | - | tig0045425:2633-2652 | Msa1465700:intron | 10.0% |
| !!! | TAAAATCAATTTTTATATAG+TGG | - | tig0045425:2783-2802 | Msa1465700:intron | 10.0% |
| !!! | AAAATCAATTTTTATATAGT+GGG | - | tig0045425:2784-2803 | Msa1465700:intron | 10.0% |
| !! | ATTACATTATCAATTATCAA+AGG | + | tig0045425:2259-2278 | Msa1465700:intergenic | 15.0% |
| !!! | TTGAAAAAAAGAGATTTTTT+TGG | - | tig0045425:2351-2370 | Msa1465700:intron | 15.0% |
| !! | AAAAATTCAGTAATAATTTG+AGG | + | tig0045425:2500-2519 | Msa1465700:intergenic | 15.0% |
| !!! | ATTATTACTGAATTTTTTAC+TGG | - | tig0045425:2503-2522 | Msa1465700:CDS | 15.0% |
| !! | AATTAGTCCTTAAAAAAATT+AGG | - | tig0045425:2622-2641 | Msa1465700:intron | 15.0% |
| !!! | AAAAATTGATTTTACAACTT+TGG | + | tig0045425:2777-2796 | Msa1465700:intergenic | 15.0% |
| !!! | ATTTTTCTAAGAATTAAAGA+AGG | - | tig0045425:3453-3472 | Msa1465700:intron | 15.0% |
| !! | ATTACATTATCAATTATCAA+AGG | + | tig0045425:2259-2278 | Msa1465700:intergenic | 15.0% |
| !!! | TTGAAAAAAAGAGATTTTTT+TGG | - | tig0045425:2351-2370 | Msa1465700:intron | 15.0% |
| !! | AAAAATTCAGTAATAATTTG+AGG | + | tig0045425:2500-2519 | Msa1465700:intergenic | 15.0% |
| !!! | ATTATTACTGAATTTTTTAC+TGG | - | tig0045425:2503-2522 | Msa1465700:CDS | 15.0% |
| !! | AATTAGTCCTTAAAAAAATT+AGG | - | tig0045425:2622-2641 | Msa1465700:intron | 15.0% |
| !!! | AAAAATTGATTTTACAACTT+TGG | + | tig0045425:2777-2796 | Msa1465700:intergenic | 15.0% |
| !!! | ATTTTTCTAAGAATTAAAGA+AGG | - | tig0045425:3453-3472 | Msa1465700:intron | 15.0% |
| !! | AAATTCAGAATATAATTCCT+AGG | - | tig0045425:2561-2580 | Msa1465700:CDS | 20.0% |
| !!! | ACTAAATCAACAATTTTCTA+CGG | - | tig0045425:2744-2763 | Msa1465700:intron | 20.0% |
| !!! | TCTTATCTAATTGGTATTTT+TGG | - | tig0045425:3184-3203 | Msa1465700:intron | 20.0% |
| !!! | TTTGTTTTGATTGCATTATT+AGG | - | tig0045425:3357-3376 | Msa1465700:intron | 20.0% |
| !!! | TTATCTTTGATAATTTGAGT+TGG | - | tig0045425:3425-3444 | Msa1465700:intron | 20.0% |
| !! | AATACAAACATATACTTAGT+TGG | - | tig0045425:3532-3551 | Msa1465700:five_prime_UTR | 20.0% |
| !! | AAATTCAGAATATAATTCCT+AGG | - | tig0045425:2561-2580 | Msa1465700:CDS | 20.0% |
| !!! | ACTAAATCAACAATTTTCTA+CGG | - | tig0045425:2744-2763 | Msa1465700:intron | 20.0% |
| !!! | TCTTATCTAATTGGTATTTT+TGG | - | tig0045425:3184-3203 | Msa1465700:intron | 20.0% |
| !!! | TTTGTTTTGATTGCATTATT+AGG | - | tig0045425:3357-3376 | Msa1465700:intron | 20.0% |
| !!! | TTATCTTTGATAATTTGAGT+TGG | - | tig0045425:3425-3444 | Msa1465700:intron | 20.0% |
| !! | AATACAAACATATACTTAGT+TGG | - | tig0045425:3532-3551 | Msa1465700:five_prime_UTR | 20.0% |
| ! | AGAAATAAACAACGAAAAGT+GGG | + | tig0045425:2052-2071 | Msa1465700:intergenic | 25.0% |
| ! | TAGAAATAAACAACGAAAAG+TGG | + | tig0045425:2053-2072 | Msa1465700:intergenic | 25.0% |
| ! | TAATGAATTTAGAAGATGCT+AGG | - | tig0045425:2319-2338 | Msa1465700:intron | 25.0% |
| !!! | AGATTTTTTTGGATGATACA+AGG | - | tig0045425:2362-2381 | Msa1465700:intron | 25.0% |
| !!! | GATTTTTTTGGATGATACAA+GGG | - | tig0045425:2363-2382 | Msa1465700:intron | 25.0% |
| !!! | ATTTTTTTGGATGATACAAG+GGG | - | tig0045425:2364-2383 | Msa1465700:intron | 25.0% |
| !!! | ATTTTTATATAGTGGGAATC+TGG | - | tig0045425:2791-2810 | Msa1465700:intron | 25.0% |
| !!! | TTTTTATATAGTGGGAATCT+GGG | - | tig0045425:2792-2811 | Msa1465700:intron | 25.0% |
| !!! | GAATTTTGTTTTGGTGAATA+AGG | - | tig0045425:2819-2838 | Msa1465700:intron | 25.0% |
| ! | CATTCAATATCAAATCATCA+AGG | + | tig0045425:3021-3040 | Msa1465700:intergenic | 25.0% |
| !! | ATCTATTCTGATTTTTGTAC+TGG | - | tig0045425:3289-3308 | Msa1465700:CDS | 25.0% |
| !!! | TGCTTTTGACTTAAGAATAT+GGG | - | tig0045425:3394-3413 | Msa1465700:intron | 25.0% |
| ! | AGAAATAAACAACGAAAAGT+GGG | + | tig0045425:2052-2071 | Msa1465700:intergenic | 25.0% |
| ! | TAGAAATAAACAACGAAAAG+TGG | + | tig0045425:2053-2072 | Msa1465700:intergenic | 25.0% |
| ! | TAATGAATTTAGAAGATGCT+AGG | - | tig0045425:2319-2338 | Msa1465700:intron | 25.0% |
| !!! | AGATTTTTTTGGATGATACA+AGG | - | tig0045425:2362-2381 | Msa1465700:intron | 25.0% |
| !!! | GATTTTTTTGGATGATACAA+GGG | - | tig0045425:2363-2382 | Msa1465700:intron | 25.0% |
| !!! | ATTTTTTTGGATGATACAAG+GGG | - | tig0045425:2364-2383 | Msa1465700:intron | 25.0% |
| !!! | ATTTTTATATAGTGGGAATC+TGG | - | tig0045425:2791-2810 | Msa1465700:intron | 25.0% |
| !!! | TTTTTATATAGTGGGAATCT+GGG | - | tig0045425:2792-2811 | Msa1465700:intron | 25.0% |
| !!! | GAATTTTGTTTTGGTGAATA+AGG | - | tig0045425:2819-2838 | Msa1465700:intron | 25.0% |
| ! | CATTCAATATCAAATCATCA+AGG | + | tig0045425:3021-3040 | Msa1465700:intergenic | 25.0% |
| !! | ATCTATTCTGATTTTTGTAC+TGG | - | tig0045425:3289-3308 | Msa1465700:CDS | 25.0% |
| !!! | TGCTTTTGACTTAAGAATAT+GGG | - | tig0045425:3394-3413 | Msa1465700:intron | 25.0% |
| AGATCGAAGAAGAAGAATTA+GGG | + | tig0045425:2013-2032 | Msa1465700:intergenic | 30.0% | |
| ATTATCAAAGGATACAGTGA+CGG | + | tig0045425:2247-2266 | Msa1465700:intergenic | 30.0% | |
| ATTTAGAAGATGCTAGGAAT+TGG | - | tig0045425:2325-2344 | Msa1465700:intron | 30.0% | |
| TTTAGAAGATGCTAGGAATT+GGG | - | tig0045425:2326-2345 | Msa1465700:intron | 30.0% | |
| AATGACAATTAACAACTCCT+AGG | + | tig0045425:2581-2600 | Msa1465700:intergenic | 30.0% | |
| TAAGTGCTAGTTAAAGTTCT+TGG | - | tig0045425:2671-2690 | Msa1465700:intron | 30.0% | |
| TAAAGTTCTTGGATAGAGTT+AGG | - | tig0045425:2682-2701 | Msa1465700:intron | 30.0% | |
| ! | ATCAACAATTTTCTACGGTA+AGG | - | tig0045425:2749-2768 | Msa1465700:intron | 30.0% |
| ! | TCAACAATTTTCTACGGTAA+GGG | - | tig0045425:2750-2769 | Msa1465700:intron | 30.0% |
| !!! | CTGGGTTTTGAATTTTGTTT+TGG | - | tig0045425:2810-2829 | Msa1465700:intron | 30.0% |
| !!! | AGATAGCGTGTTTTAAAGAT+TGG | - | tig0045425:2878-2897 | Msa1465700:intron | 30.0% |
| TCCTTAAGTCATTGTTGATA+GGG | - | tig0045425:2905-2924 | Msa1465700:intron | 30.0% | |
| TGTTGGTCATCTTATCTAAT+TGG | - | tig0045425:3175-3194 | Msa1465700:intron | 30.0% | |
| !!! | GTATTTTTGGTTGTACTTAC+AGG | - | tig0045425:3197-3216 | Msa1465700:intron | 30.0% |
| !! | TCTGATTTTTGTACTGGTAA+TGG | - | tig0045425:3295-3314 | Msa1465700:CDS | 30.0% |
| !! | CTGATTTTTGTACTGGTAAT+GGG | - | tig0045425:3296-3315 | Msa1465700:CDS | 30.0% |
| !! | TGATTTTTGTACTGGTAATG+GGG | - | tig0045425:3297-3316 | Msa1465700:CDS | 30.0% |
| !!! | TCAGTGGAATTCCTTTTTTT+GGG | - | tig0045425:3327-3346 | Msa1465700:CDS | 30.0% |
| CAAAATTGAGTCCCAAAAAA+AGG | + | tig0045425:3341-3360 | Msa1465700:intergenic | 30.0% | |
| !!! | GTGCTTTTGACTTAAGAATA+TGG | - | tig0045425:3393-3412 | Msa1465700:intron | 30.0% |
| TTAAGCAAACTCCAATACAA+GGG | + | tig0045425:3508-3527 | Msa1465700:intergenic | 30.0% | |
| AGATCGAAGAAGAAGAATTA+GGG | + | tig0045425:2013-2032 | Msa1465700:intergenic | 30.0% | |
| ATTATCAAAGGATACAGTGA+CGG | + | tig0045425:2247-2266 | Msa1465700:intergenic | 30.0% | |
| ATTTAGAAGATGCTAGGAAT+TGG | - | tig0045425:2325-2344 | Msa1465700:intron | 30.0% | |
| TTTAGAAGATGCTAGGAATT+GGG | - | tig0045425:2326-2345 | Msa1465700:intron | 30.0% | |
| AATGACAATTAACAACTCCT+AGG | + | tig0045425:2581-2600 | Msa1465700:intergenic | 30.0% | |
| TAAGTGCTAGTTAAAGTTCT+TGG | - | tig0045425:2671-2690 | Msa1465700:intron | 30.0% | |
| TAAAGTTCTTGGATAGAGTT+AGG | - | tig0045425:2682-2701 | Msa1465700:intron | 30.0% | |
| ! | ATCAACAATTTTCTACGGTA+AGG | - | tig0045425:2749-2768 | Msa1465700:intron | 30.0% |
| ! | TCAACAATTTTCTACGGTAA+GGG | - | tig0045425:2750-2769 | Msa1465700:intron | 30.0% |
| !!! | CTGGGTTTTGAATTTTGTTT+TGG | - | tig0045425:2810-2829 | Msa1465700:intron | 30.0% |
| !!! | AGATAGCGTGTTTTAAAGAT+TGG | - | tig0045425:2878-2897 | Msa1465700:intron | 30.0% |
| TCCTTAAGTCATTGTTGATA+GGG | - | tig0045425:2905-2924 | Msa1465700:intron | 30.0% | |
| TGTTGGTCATCTTATCTAAT+TGG | - | tig0045425:3175-3194 | Msa1465700:intron | 30.0% | |
| !!! | GTATTTTTGGTTGTACTTAC+AGG | - | tig0045425:3197-3216 | Msa1465700:intron | 30.0% |
| !! | TCTGATTTTTGTACTGGTAA+TGG | - | tig0045425:3295-3314 | Msa1465700:CDS | 30.0% |
| !! | CTGATTTTTGTACTGGTAAT+GGG | - | tig0045425:3296-3315 | Msa1465700:CDS | 30.0% |
| !! | TGATTTTTGTACTGGTAATG+GGG | - | tig0045425:3297-3316 | Msa1465700:CDS | 30.0% |
| !!! | TCAGTGGAATTCCTTTTTTT+GGG | - | tig0045425:3327-3346 | Msa1465700:CDS | 30.0% |
| CAAAATTGAGTCCCAAAAAA+AGG | + | tig0045425:3341-3360 | Msa1465700:intergenic | 30.0% | |
| !!! | GTGCTTTTGACTTAAGAATA+TGG | - | tig0045425:3393-3412 | Msa1465700:intron | 30.0% |
| TTAAGCAAACTCCAATACAA+GGG | + | tig0045425:3508-3527 | Msa1465700:intergenic | 30.0% | |
| CTGCAAAATGGTAGGAATTT+AGG | + | tig0045425:1978-1997 | None:intergenic | 35.0% | |
| GAGATCGAAGAAGAAGAATT+AGG | + | tig0045425:2014-2033 | Msa1465700:intergenic | 35.0% | |
| TGTAGTGTGAAAATGTCGAT+CGG | - | tig0045425:2171-2190 | Msa1465700:three_prime_UTR | 35.0% | |
| TTTGGTGAATAAGGAAAGTG+TGG | - | tig0045425:2828-2847 | Msa1465700:intron | 35.0% | |
| ! | AATAAGGAAAGTGTGGTGTA+AGG | - | tig0045425:2835-2854 | Msa1465700:intron | 35.0% |
| ! | ATAAGGAAAGTGTGGTGTAA+GGG | - | tig0045425:2836-2855 | Msa1465700:intron | 35.0% |
| CTCCTTAAGTCATTGTTGAT+AGG | - | tig0045425:2904-2923 | Msa1465700:intron | 35.0% | |
| ACCCTATCAACAATGACTTA+AGG | + | tig0045425:2909-2928 | Msa1465700:intergenic | 35.0% | |
| ACGTTAATGTTGAAGCTTAC+TGG | - | tig0045425:2960-2979 | Msa1465700:intron | 35.0% | |
| GCAAGTTTAGCGAATAAACT+TGG | + | tig0045425:2986-3005 | Msa1465700:intergenic | 35.0% | |
| ATCATCAAGGTTCTTCTTCT+CGG | + | tig0045425:3008-3027 | Msa1465700:intergenic | 35.0% | |
| GAACTTTGTCTTCTGTTTGT+TGG | - | tig0045425:3158-3177 | Msa1465700:intron | 35.0% | |
| !!! | CTCAGTGGAATTCCTTTTTT+TGG | - | tig0045425:3326-3345 | Msa1465700:CDS | 35.0% |
| GTTAAGCAAACTCCAATACA+AGG | + | tig0045425:3509-3528 | Msa1465700:intergenic | 35.0% | |
| CTGCAAAATGGTAGGAATTT+AGG | + | tig0045425:1978-1997 | Msa1465700:intergenic | 35.0% | |
| GAGATCGAAGAAGAAGAATT+AGG | + | tig0045425:2014-2033 | Msa1465700:intergenic | 35.0% | |
| TGTAGTGTGAAAATGTCGAT+CGG | - | tig0045425:2171-2190 | Msa1465700:three_prime_UTR | 35.0% | |
| TTTGGTGAATAAGGAAAGTG+TGG | - | tig0045425:2828-2847 | Msa1465700:intron | 35.0% | |
| ! | AATAAGGAAAGTGTGGTGTA+AGG | - | tig0045425:2835-2854 | Msa1465700:intron | 35.0% |
| ! | ATAAGGAAAGTGTGGTGTAA+GGG | - | tig0045425:2836-2855 | Msa1465700:intron | 35.0% |
| CTCCTTAAGTCATTGTTGAT+AGG | - | tig0045425:2904-2923 | Msa1465700:intron | 35.0% | |
| ACCCTATCAACAATGACTTA+AGG | + | tig0045425:2909-2928 | Msa1465700:intergenic | 35.0% | |
| ACGTTAATGTTGAAGCTTAC+TGG | - | tig0045425:2960-2979 | Msa1465700:intron | 35.0% | |
| GCAAGTTTAGCGAATAAACT+TGG | + | tig0045425:2986-3005 | Msa1465700:intergenic | 35.0% | |
| ATCATCAAGGTTCTTCTTCT+CGG | + | tig0045425:3008-3027 | Msa1465700:intergenic | 35.0% | |
| GAACTTTGTCTTCTGTTTGT+TGG | - | tig0045425:3158-3177 | Msa1465700:intron | 35.0% | |
| !!! | CTCAGTGGAATTCCTTTTTT+TGG | - | tig0045425:3326-3345 | Msa1465700:CDS | 35.0% |
| GTTAAGCAAACTCCAATACA+AGG | + | tig0045425:3509-3528 | Msa1465700:intergenic | 35.0% | |
| TCTTCGATCTCATTCCTTCA+AGG | - | tig0045425:2023-2042 | Msa1465700:three_prime_UTR | 40.0% | |
| GATGATACAAGGGGCTATAT+AGG | - | tig0045425:2373-2392 | Msa1465700:intron | 40.0% | |
| !!! | TCGATCAGAAGTGTCGTTTT+AGG | + | tig0045425:2407-2426 | Msa1465700:intergenic | 40.0% |
| GTTTGCAGCTTTCAACAAAG+TGG | + | tig0045425:2942-2961 | Msa1465700:intergenic | 40.0% | |
| GATTTGATATTGAATGCCGC+TGG | - | tig0045425:3025-3044 | Msa1465700:intron | 40.0% | |
| ! | AGGAGAAGAAGGTAGGTTTT+TGG | - | tig0045425:3119-3138 | Msa1465700:intron | 40.0% |
| TCTTCGATCTCATTCCTTCA+AGG | - | tig0045425:2023-2042 | Msa1465700:three_prime_UTR | 40.0% | |
| GATGATACAAGGGGCTATAT+AGG | - | tig0045425:2373-2392 | Msa1465700:intron | 40.0% | |
| !!! | TCGATCAGAAGTGTCGTTTT+AGG | + | tig0045425:2407-2426 | Msa1465700:intergenic | 40.0% |
| GTTTGCAGCTTTCAACAAAG+TGG | + | tig0045425:2942-2961 | Msa1465700:intergenic | 40.0% | |
| GATTTGATATTGAATGCCGC+TGG | - | tig0045425:3025-3044 | Msa1465700:intron | 40.0% | |
| ! | AGGAGAAGAAGGTAGGTTTT+TGG | - | tig0045425:3119-3138 | Msa1465700:intron | 40.0% |
| TTTCCTACGCTGCTGCAAAA+TGG | + | tig0045425:1990-2009 | Msa1465700:intergenic | 45.0% | |
| !! | CGAAAAGTGGGTTACCTTGA+AGG | + | tig0045425:2040-2059 | Msa1465700:intergenic | 45.0% |
| CGGCGATGTTATCATCATGA+AGG | + | tig0045425:2227-2246 | Msa1465700:intergenic | 45.0% | |
| CTTCTGATCGAAGTTGTGTC+TGG | - | tig0045425:2416-2435 | Msa1465700:CDS | 45.0% | |
| TTGATATTGAATGCCGCTGG+AGG | - | tig0045425:3028-3047 | Msa1465700:intron | 45.0% | |
| GTACTTACAGGAAGAACCCA+AGG | - | tig0045425:3209-3228 | Msa1465700:intron | 45.0% | |
| ! | GTAATGGGGTAGTTACTCAG+TGG | - | tig0045425:3311-3330 | Msa1465700:CDS | 45.0% |
| TTTCCTACGCTGCTGCAAAA+TGG | + | tig0045425:1990-2009 | Msa1465700:intergenic | 45.0% | |
| !! | CGAAAAGTGGGTTACCTTGA+AGG | + | tig0045425:2040-2059 | Msa1465700:intergenic | 45.0% |
| CGGCGATGTTATCATCATGA+AGG | + | tig0045425:2227-2246 | Msa1465700:intergenic | 45.0% | |
| CTTCTGATCGAAGTTGTGTC+TGG | - | tig0045425:2416-2435 | Msa1465700:CDS | 45.0% | |
| TTGATATTGAATGCCGCTGG+AGG | - | tig0045425:3028-3047 | Msa1465700:intron | 45.0% | |
| GTACTTACAGGAAGAACCCA+AGG | - | tig0045425:3209-3228 | Msa1465700:intron | 45.0% | |
| ! | GTAATGGGGTAGTTACTCAG+TGG | - | tig0045425:3311-3330 | Msa1465700:CDS | 45.0% |
| !!! | TTTTTTTATTTTCTTATTTT+AGG | - | tig0045425:2721-2740 | Msa1465700:intron | 5.0% |
| !!! | TTTTTTTATTTTCTTATTTT+AGG | - | tig0045425:2721-2740 | Msa1465700:intron | 5.0% |
| CTACGCTGCTGCAAAATGGT+AGG | + | tig0045425:1986-2005 | None:intergenic | 50.0% | |
| ! | CTACCATTTTGCAGCAGCGT+AGG | - | tig0045425:1984-2003 | Msa1465700:three_prime_UTR | 50.0% |
| TGGTGTGTGTCAGTGCTTCA+TGG | - | tig0045425:2523-2542 | Msa1465700:CDS | 50.0% | |
| ATATTGAATGCCGCTGGAGG+TGG | - | tig0045425:3031-3050 | Msa1465700:intron | 50.0% | |
| TGGTGCTCCGGTTTCTGTTT+CGG | - | tig0045425:3051-3070 | Msa1465700:intron | 50.0% | |
| TGCTCCTATCGAGGAGAAGA+AGG | - | tig0045425:3108-3127 | Msa1465700:intron | 50.0% | |
| CCTACCTTCTTCTCCTCGAT+AGG | + | tig0045425:3115-3134 | Msa1465700:intergenic | 50.0% | |
| CCTATCGAGGAGAAGAAGGT+AGG | - | tig0045425:3112-3131 | Msa1465700:intron | 50.0% | |
| TCGTCGTCACTCTCATCCTT+GGG | + | tig0045425:3228-3247 | Msa1465700:intergenic | 50.0% | |
| GATGAGAGTGACGACGACAT+GGG | - | tig0045425:3231-3250 | Msa1465700:intron | 50.0% | |
| GTTCCTGTGTGCCCTTGTAT+TGG | - | tig0045425:3494-3513 | Msa1465700:five_prime_UTR | 50.0% | |
| ! | ACTCCAATACAAGGGCACAC+AGG | + | tig0045425:3500-3519 | Msa1465700:intergenic | 50.0% |
| CTACGCTGCTGCAAAATGGT+AGG | + | tig0045425:1986-2005 | Msa1465700:intergenic | 50.0% | |
| ! | CTACCATTTTGCAGCAGCGT+AGG | - | tig0045425:1984-2003 | Msa1465700:three_prime_UTR | 50.0% |
| TGGTGTGTGTCAGTGCTTCA+TGG | - | tig0045425:2523-2542 | Msa1465700:CDS | 50.0% | |
| ATATTGAATGCCGCTGGAGG+TGG | - | tig0045425:3031-3050 | Msa1465700:intron | 50.0% | |
| TGGTGCTCCGGTTTCTGTTT+CGG | - | tig0045425:3051-3070 | Msa1465700:intron | 50.0% | |
| TGCTCCTATCGAGGAGAAGA+AGG | - | tig0045425:3108-3127 | Msa1465700:intron | 50.0% | |
| CCTACCTTCTTCTCCTCGAT+AGG | + | tig0045425:3115-3134 | Msa1465700:intergenic | 50.0% | |
| CCTATCGAGGAGAAGAAGGT+AGG | - | tig0045425:3112-3131 | Msa1465700:intron | 50.0% | |
| TCGTCGTCACTCTCATCCTT+GGG | + | tig0045425:3228-3247 | Msa1465700:intergenic | 50.0% | |
| GATGAGAGTGACGACGACAT+GGG | - | tig0045425:3231-3250 | Msa1465700:intron | 50.0% | |
| GTTCCTGTGTGCCCTTGTAT+TGG | - | tig0045425:3494-3513 | Msa1465700:five_prime_UTR | 50.0% | |
| ! | ACTCCAATACAAGGGCACAC+AGG | + | tig0045425:3500-3519 | Msa1465700:intergenic | 50.0% |
| ACTGGGGCCGAAACAGAAAC+CGG | + | tig0045425:3061-3080 | Msa1465700:intergenic | 55.0% | |
| GATAGGAGCAGCAACTGCAG+TGG | + | tig0045425:3098-3117 | Msa1465700:intergenic | 55.0% | |
| TGCAGTTGCTGCTCCTATCG+AGG | - | tig0045425:3099-3118 | Msa1465700:intron | 55.0% | |
| GTCGTCGTCACTCTCATCCT+TGG | + | tig0045425:3229-3248 | Msa1465700:intergenic | 55.0% | |
| GGATGAGAGTGACGACGACA+TGG | - | tig0045425:3230-3249 | Msa1465700:intron | 55.0% | |
| ACTGGGGCCGAAACAGAAAC+CGG | + | tig0045425:3061-3080 | Msa1465700:intergenic | 55.0% | |
| GATAGGAGCAGCAACTGCAG+TGG | + | tig0045425:3098-3117 | Msa1465700:intergenic | 55.0% | |
| TGCAGTTGCTGCTCCTATCG+AGG | - | tig0045425:3099-3118 | Msa1465700:intron | 55.0% | |
| GTCGTCGTCACTCTCATCCT+TGG | + | tig0045425:3229-3248 | Msa1465700:intergenic | 55.0% | |
| GGATGAGAGTGACGACGACA+TGG | - | tig0045425:3230-3249 | Msa1465700:intron | 55.0% | |
| TGGAGGCAGCAGCAGCAACT+GGG | + | tig0045425:3078-3097 | Msa1465700:intergenic | 60.0% | |
| AGGAGCAGCAACTGCAGTGG+AGG | + | tig0045425:3095-3114 | Msa1465700:intergenic | 60.0% | |
| TGGAGGCAGCAGCAGCAACT+GGG | + | tig0045425:3078-3097 | Msa1465700:intergenic | 60.0% | |
| AGGAGCAGCAACTGCAGTGG+AGG | + | tig0045425:3095-3114 | Msa1465700:intergenic | 60.0% | |
| ! | AACCGGAGCACCACCTCCAG+CGG | + | tig0045425:3044-3063 | Msa1465700:intergenic | 65.0% |
| GGAGGCAGCAGCAGCAACTG+GGG | + | tig0045425:3077-3096 | Msa1465700:intergenic | 65.0% | |
| GTGGAGGCAGCAGCAGCAAC+TGG | + | tig0045425:3079-3098 | Msa1465700:intergenic | 65.0% | |
| ! | AACCGGAGCACCACCTCCAG+CGG | + | tig0045425:3044-3063 | Msa1465700:intergenic | 65.0% |
| GGAGGCAGCAGCAGCAACTG+GGG | + | tig0045425:3077-3096 | Msa1465700:intergenic | 65.0% | |
| GTGGAGGCAGCAGCAGCAAC+TGG | + | tig0045425:3079-3098 | Msa1465700:intergenic | 65.0% | |
| TGCCGCTGGAGGTGGTGCTC+CGG | - | tig0045425:3039-3058 | Msa1465700:intron | 70.0% | |
| TGCCGCTGGAGGTGGTGCTC+CGG | - | tig0045425:3039-3058 | Msa1465700:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0045425 | gene | 1970 | 3562 | 1970 | ID=Msa1465700;Name=Msa1465700 |
| tig0045425 | mRNA | 1970 | 3562 | 1970 | ID=Msa1465700-mRNA-1;Parent=Msa1465700;Name=Msa1465700-mRNA-1;_AED=0.16;_eAED=0.16;_QI=82|1|1|1|0.66|0.75|4|290|108 |
| tig0045425 | exon | 1970 | 2313 | 1970 | ID=Msa1465700-mRNA-1:exon:24859;Parent=Msa1465700-mRNA-1 |
| tig0045425 | exon | 2403 | 2606 | 2403 | ID=Msa1465700-mRNA-1:exon:24858;Parent=Msa1465700-mRNA-1 |
| tig0045425 | exon | 3281 | 3356 | 3281 | ID=Msa1465700-mRNA-1:exon:24857;Parent=Msa1465700-mRNA-1 |
| tig0045425 | exon | 3488 | 3562 | 3488 | ID=Msa1465700-mRNA-1:exon:24856;Parent=Msa1465700-mRNA-1 |
| tig0045425 | five_prime_UTR | 3488 | 3562 | 3488 | ID=Msa1465700-mRNA-1:five_prime_utr;Parent=Msa1465700-mRNA-1 |
| tig0045425 | five_prime_UTR | 3350 | 3356 | 3350 | ID=Msa1465700-mRNA-1:five_prime_utr;Parent=Msa1465700-mRNA-1 |
| tig0045425 | CDS | 3281 | 3349 | 3281 | ID=Msa1465700-mRNA-1:cds;Parent=Msa1465700-mRNA-1 |
| tig0045425 | CDS | 2403 | 2606 | 2403 | ID=Msa1465700-mRNA-1:cds;Parent=Msa1465700-mRNA-1 |
| tig0045425 | CDS | 2260 | 2313 | 2260 | ID=Msa1465700-mRNA-1:cds;Parent=Msa1465700-mRNA-1 |
| tig0045425 | three_prime_UTR | 1970 | 2259 | 1970 | ID=Msa1465700-mRNA-1:three_prime_utr;Parent=Msa1465700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
