Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235950 | XP_013444548.1 | 98.148 | 108 | 2 | 0 | 1 | 108 | 1 | 108 | 1.08e-68 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235950 | sp|O23095|RLA12_ARATH | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 3.01e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235950 | I3S0D9 | 98.148 | 108 | 2 | 0 | 1 | 108 | 1 | 108 | 5.16e-69 | 211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1235950 | 0.855467 | 6.186133e-62 | -8.615850e-47 |
| Msa0002430 | Msa1235950 | 0.826643 | 2.423589e-54 | -8.615850e-47 |
| Msa0003330 | Msa1235950 | 0.861564 | 9.387961e-64 | -8.615850e-47 |
| Msa0027590 | Msa1235950 | 0.870304 | 1.615022e-66 | -8.615850e-47 |
| Msa0037230 | Msa1235950 | 0.806694 | 7.265388e-50 | -8.615850e-47 |
| Msa0042510 | Msa1235950 | 0.842345 | 2.736935e-58 | -8.615850e-47 |
| Msa0071760 | Msa1235950 | 0.835500 | 1.618692e-56 | -8.615850e-47 |
| Msa0075350 | Msa1235950 | 0.811088 | 8.339593e-51 | -8.615850e-47 |
| Msa0079560 | Msa1235950 | 0.841160 | 5.623936e-58 | -8.615850e-47 |
| Msa0086160 | Msa1235950 | 0.819840 | 9.403081e-53 | -8.615850e-47 |
| Msa0089540 | Msa1235950 | 0.821691 | 3.528856e-53 | -8.615850e-47 |
| Msa0098210 | Msa1235950 | 0.806735 | 7.120004e-50 | -8.615850e-47 |
| Msa0114600 | Msa1235950 | 0.821094 | 4.846374e-53 | -8.615850e-47 |
| Msa0602900 | Msa1235950 | 0.918584 | 1.301688e-86 | -8.615850e-47 |
| Msa0605600 | Msa1235950 | 0.844545 | 7.072980e-59 | -8.615850e-47 |
| Msa0605890 | Msa1235950 | 0.864152 | 1.492861e-64 | -8.615850e-47 |
| Msa0609120 | Msa1235950 | 0.828332 | 9.534147e-55 | -8.615850e-47 |
| Msa0619230 | Msa1235950 | 0.882222 | 1.248457e-70 | -8.615850e-47 |
| Msa0621190 | Msa1235950 | 0.860438 | 2.065062e-63 | -8.615850e-47 |
| Msa0643960 | Msa1235950 | 0.917357 | 5.859566e-86 | -8.615850e-47 |
| Msa0648670 | Msa1235950 | 0.810132 | 1.341964e-50 | -8.615850e-47 |
| Msa0649890 | Msa1235950 | 0.822138 | 2.780381e-53 | -8.615850e-47 |
| Msa0656450 | Msa1235950 | 0.863023 | 3.346523e-64 | -8.615850e-47 |
| Msa0663400 | Msa1235950 | 0.806432 | 8.251661e-50 | -8.615850e-47 |
| Msa0686550 | Msa1235950 | 0.832852 | 7.460012e-56 | -8.615850e-47 |
| Msa0691760 | Msa1235950 | 0.850599 | 1.529670e-60 | -8.615850e-47 |
| Msa0694400 | Msa1235950 | 0.899338 | 2.188111e-77 | -8.615850e-47 |
| Msa0700370 | Msa1235950 | 0.835000 | 2.164673e-56 | -8.615850e-47 |
| Msa0704860 | Msa1235950 | 0.807500 | 4.904859e-50 | -8.615850e-47 |
| Msa0708630 | Msa1235950 | 0.873406 | 1.507637e-67 | -8.615850e-47 |
| Msa0741510 | Msa1235950 | 0.829990 | 3.778603e-55 | -8.615850e-47 |
| Msa0748350 | Msa1235950 | 0.823582 | 1.282039e-53 | -8.615850e-47 |
| Msa0790450 | Msa1235950 | 0.850718 | 1.416790e-60 | -8.615850e-47 |
| Msa0798590 | Msa1235950 | 0.811414 | 7.085606e-51 | -8.615850e-47 |
| Msa0834220 | Msa1235950 | 0.864705 | 1.002982e-64 | -8.615850e-47 |
| Msa0123290 | Msa1235950 | 0.850596 | 1.533415e-60 | -8.615850e-47 |
| Msa0127230 | Msa1235950 | 0.831975 | 1.230864e-55 | -8.615850e-47 |
| Msa0128330 | Msa1235950 | 0.845511 | 3.879796e-59 | -8.615850e-47 |
| Msa0132460 | Msa1235950 | 0.872489 | 3.058491e-67 | -8.615850e-47 |
| Msa0134580 | Msa1235950 | 0.835092 | 2.052170e-56 | -8.615850e-47 |
| Msa0136400 | Msa1235950 | 0.827594 | 1.435098e-54 | -8.615850e-47 |
| Msa0167800 | Msa1235950 | -0.801356 | 9.359867e-49 | -8.615850e-47 |
| Msa0167860 | Msa1235950 | 0.900578 | 6.364620e-78 | -8.615850e-47 |
| Msa0168320 | Msa1235950 | 0.842045 | 3.285611e-58 | -8.615850e-47 |
| Msa0174580 | Msa1235950 | 0.833580 | 4.914021e-56 | -8.615850e-47 |
| Msa0182050 | Msa1235950 | 0.876892 | 9.727147e-69 | -8.615850e-47 |
| Msa0182100 | Msa1235950 | 0.901469 | 2.596918e-78 | -8.615850e-47 |
| Msa0183840 | Msa1235950 | 0.803958 | 2.718973e-49 | -8.615850e-47 |
| Msa0188740 | Msa1235950 | 0.845301 | 4.423434e-59 | -8.615850e-47 |
| Msa0191450 | Msa1235950 | 0.826948 | 2.049581e-54 | -8.615850e-47 |
| Msa0191550 | Msa1235950 | 0.843557 | 1.302643e-58 | -8.615850e-47 |
| Msa0192300 | Msa1235950 | 0.892124 | 2.119754e-74 | -8.615850e-47 |
| Msa0192490 | Msa1235950 | 0.814593 | 1.423776e-51 | -8.615850e-47 |
| Msa0195030 | Msa1235950 | 0.840472 | 8.518222e-58 | -8.615850e-47 |
| Msa0219090 | Msa1235950 | 0.819312 | 1.240785e-52 | -8.615850e-47 |
| Msa0233550 | Msa1235950 | 0.868709 | 5.336630e-66 | -8.615850e-47 |
| Msa0235050 | Msa1235950 | 0.822769 | 1.983815e-53 | -8.615850e-47 |
| Msa0237180 | Msa1235950 | 0.841403 | 4.853996e-58 | -8.615850e-47 |
| Msa1235950 | Msa1235980 | 0.998190 | 2.291756e-258 | -8.615850e-47 |
| Msa1235950 | Msa1237040 | 0.893916 | 4.025144e-75 | -8.615850e-47 |
| Msa1235950 | Msa1257450 | 0.808710 | 2.709175e-50 | -8.615850e-47 |
| Msa1235950 | Msa1258540 | 0.827671 | 1.375415e-54 | -8.615850e-47 |
| Msa1235950 | Msa1270640 | 0.822185 | 2.712047e-53 | -8.615850e-47 |
| Msa1235950 | Msa1270710 | 0.824676 | 7.094337e-54 | -8.615850e-47 |
| Msa1235950 | Msa1278130 | 0.806948 | 6.419332e-50 | -8.615850e-47 |
| Msa1235950 | Msa1284060 | 0.822098 | 2.840851e-53 | -8.615850e-47 |
| Msa1235950 | Msa1284800 | 0.823705 | 1.199524e-53 | -8.615850e-47 |
| Msa1235950 | Msa1316100 | 0.963286 | 6.722433e-122 | -8.615850e-47 |
| Msa1235950 | Msa1317390 | 0.923314 | 3.125817e-89 | -8.615850e-47 |
| Msa1235950 | Msa1329930 | 0.808041 | 3.762958e-50 | -8.615850e-47 |
| Msa1235950 | Msa1333370 | 0.833777 | 4.388880e-56 | -8.615850e-47 |
| Msa1235950 | Msa1341780 | 0.842347 | 2.732731e-58 | -8.615850e-47 |
| Msa1235950 | Msa1344160 | 0.837889 | 3.981963e-57 | -8.615850e-47 |
| Msa1235950 | Msa1344190 | 0.835721 | 1.422553e-56 | -8.615850e-47 |
| Msa1235950 | Msa1351020 | 0.886542 | 3.124596e-72 | -8.615850e-47 |
| Msa1235950 | Msa1351910 | 0.814915 | 1.207829e-51 | -8.615850e-47 |
| Msa1235950 | Msa1353300 | 0.826143 | 3.188375e-54 | -8.615850e-47 |
| Msa1235950 | Msa1358710 | 0.836249 | 1.045165e-56 | -8.615850e-47 |
| Msa1235950 | Msa1363910 | 0.801304 | 9.589939e-49 | -8.615850e-47 |
| Msa1235950 | Msa1371410 | 0.834761 | 2.486877e-56 | -8.615850e-47 |
| Msa1235950 | Msa1385480 | 0.893206 | 7.801868e-75 | -8.615850e-47 |
| Msa1235950 | Msa1387750 | 0.852336 | 4.934928e-61 | -8.615850e-47 |
| Msa1235950 | Msa1390760 | 0.883450 | 4.442014e-71 | -8.615850e-47 |
| Msa1235950 | Msa1403520 | 0.811386 | 7.184450e-51 | -8.615850e-47 |
| Msa1235950 | Msa1407550 | 0.920382 | 1.373304e-87 | -8.615850e-47 |
| Msa1235950 | Msa1413570 | 0.864611 | 1.073634e-64 | -8.615850e-47 |
| Msa1235950 | Msa1415620 | 0.832656 | 8.346851e-56 | -8.615850e-47 |
| Msa1235950 | Msa1421510 | 0.864659 | 1.037370e-64 | -8.615850e-47 |
| Msa1235950 | Msa1425070 | 0.842399 | 2.647952e-58 | -8.615850e-47 |
| Msa1235950 | Msa1432310 | 0.858543 | 7.665921e-63 | -8.615850e-47 |
| Msa1235950 | Msa1441220 | -0.816862 | 4.442321e-52 | -8.615850e-47 |
| Msa1235950 | Msa1446410 | 0.807667 | 4.519244e-50 | -8.615850e-47 |
| Msa1235950 | Msa1450560 | 0.854272 | 1.374625e-61 | -8.615850e-47 |
| Msa1235950 | Msa1453380 | 0.816160 | 6.382511e-52 | -8.615850e-47 |
| Msa1235950 | Msa1453530 | 0.856346 | 3.422714e-62 | -8.615850e-47 |
| Msa1235950 | Msa1456160 | 0.812027 | 5.211821e-51 | -8.615850e-47 |
| Msa1235950 | Msa1462580 | 0.806374 | 8.485988e-50 | -8.615850e-47 |
| Msa1235950 | Msa1463570 | 0.844909 | 5.644055e-59 | -8.615850e-47 |
| Msa1235950 | Msa1465700 | 0.985902 | 4.950955e-165 | -8.615850e-47 |
| Msa0371490 | Msa1235950 | 0.868383 | 6.801817e-66 | -8.615850e-47 |
| Msa0376850 | Msa1235950 | 0.834960 | 2.215891e-56 | -8.615850e-47 |
| Msa0377370 | Msa1235950 | 0.870479 | 1.415032e-66 | -8.615850e-47 |
| Msa0377520 | Msa1235950 | 0.842118 | 3.142632e-58 | -8.615850e-47 |
| Msa0378620 | Msa1235950 | -0.802229 | 6.195317e-49 | -8.615850e-47 |
| Msa0382670 | Msa1235950 | 0.869635 | 2.671368e-66 | -8.615850e-47 |
| Msa0383690 | Msa1235950 | 0.816876 | 4.410044e-52 | -8.615850e-47 |
| Msa0387290 | Msa1235950 | 0.841345 | 5.027464e-58 | -8.615850e-47 |
| Msa0388520 | Msa1235950 | 0.802234 | 6.180544e-49 | -8.615850e-47 |
| Msa0410940 | Msa1235950 | 0.811870 | 5.639425e-51 | -8.615850e-47 |
| Msa0416470 | Msa1235950 | 0.873088 | 1.927121e-67 | -8.615850e-47 |
| Msa0426090 | Msa1235950 | 0.852725 | 3.822289e-61 | -8.615850e-47 |
| Msa0426250 | Msa1235950 | 0.834952 | 2.225627e-56 | -8.615850e-47 |
| Msa0426940 | Msa1235950 | 0.812648 | 3.813775e-51 | -8.615850e-47 |
| Msa0432750 | Msa1235950 | 0.828441 | 8.977313e-55 | -8.615850e-47 |
| Msa0433010 | Msa1235950 | 0.814500 | 1.493019e-51 | -8.615850e-47 |
| Msa0433060 | Msa1235950 | 0.835082 | 2.064212e-56 | -8.615850e-47 |
| Msa0450150 | Msa1235950 | 0.802478 | 5.504333e-49 | -8.615850e-47 |
| Msa0472480 | Msa1235950 | 0.857398 | 1.677304e-62 | -8.615850e-47 |
| Msa0479980 | Msa1235950 | 0.831927 | 1.264825e-55 | -8.615850e-47 |
| Msa0481520 | Msa1235950 | 0.816558 | 5.199338e-52 | -8.615850e-47 |
| Msa0979820 | Msa1235950 | 0.815405 | 9.403104e-52 | -8.615850e-47 |
| Msa1019110 | Msa1235950 | 0.815725 | 7.979220e-52 | -8.615850e-47 |
| Msa1025220 | Msa1235950 | 0.804426 | 2.172773e-49 | -8.615850e-47 |
| Msa1047020 | Msa1235950 | 0.816279 | 6.001294e-52 | -8.615850e-47 |
| Msa1054280 | Msa1235950 | 0.801317 | 9.533172e-49 | -8.615850e-47 |
| Msa1082050 | Msa1235950 | 0.848232 | 6.989577e-60 | -8.615850e-47 |
| Msa1083370 | Msa1235950 | 0.806274 | 8.906836e-50 | -8.615850e-47 |
| Msa1085850 | Msa1235950 | 0.865147 | 7.288535e-65 | -8.615850e-47 |
| Msa0239420 | Msa1235950 | 0.872003 | 4.440515e-67 | -8.615850e-47 |
| Msa0256350 | Msa1235950 | 0.814246 | 1.698340e-51 | -8.615850e-47 |
| Msa0270160 | Msa1235950 | 0.839389 | 1.631637e-57 | -8.615850e-47 |
| Msa0274940 | Msa1235950 | 0.846986 | 1.538400e-59 | -8.615850e-47 |
| Msa0277600 | Msa1235950 | 0.881787 | 1.794651e-70 | -8.615850e-47 |
| Msa0278540 | Msa1235950 | 0.836288 | 1.021395e-56 | -8.615850e-47 |
| Msa0281330 | Msa1235950 | 0.833196 | 6.126552e-56 | -8.615850e-47 |
| Msa0281370 | Msa1235950 | 0.862890 | 3.676429e-64 | -8.615850e-47 |
| Msa0301250 | Msa1235950 | 0.901654 | 2.153005e-78 | -8.615850e-47 |
| Msa0313060 | Msa1235950 | 0.893357 | 6.779323e-75 | -8.615850e-47 |
| Msa0315430 | Msa1235950 | 0.859652 | 3.565544e-63 | -8.615850e-47 |
| Msa0315660 | Msa1235950 | 0.841033 | 6.073777e-58 | -8.615850e-47 |
| Msa0340560 | Msa1235950 | 0.871341 | 7.357455e-67 | -8.615850e-47 |
| Msa0346090 | Msa1235950 | 0.812468 | 4.175211e-51 | -8.615850e-47 |
| Msa0363320 | Msa1235950 | 0.831633 | 1.494257e-55 | -8.615850e-47 |
| Msa1115190 | Msa1235950 | 0.814136 | 1.796790e-51 | -8.615850e-47 |
| Msa1116940 | Msa1235950 | 0.883128 | 5.831801e-71 | -8.615850e-47 |
| Msa1124980 | Msa1235950 | 0.807822 | 4.189360e-50 | -8.615850e-47 |
| Msa1126690 | Msa1235950 | 0.825069 | 5.730701e-54 | -8.615850e-47 |
| Msa1130680 | Msa1235950 | 0.827065 | 1.921554e-54 | -8.615850e-47 |
| Msa1131030 | Msa1235950 | 0.829635 | 4.611355e-55 | -8.615850e-47 |
| Msa1136880 | Msa1235950 | 0.860936 | 1.458937e-63 | -8.615850e-47 |
| Msa1136980 | Msa1235950 | 0.824718 | 6.936135e-54 | -8.615850e-47 |
| Msa1156830 | Msa1235950 | 0.802449 | 5.580516e-49 | -8.615850e-47 |
| Msa1163980 | Msa1235950 | 0.818468 | 1.929517e-52 | -8.615850e-47 |
| Msa1165210 | Msa1235950 | 0.812250 | 4.659272e-51 | -8.615850e-47 |
| Msa1167360 | Msa1235950 | 0.804778 | 1.834734e-49 | -8.615850e-47 |
| Msa1180000 | Msa1235950 | 0.845413 | 4.124955e-59 | -8.615850e-47 |
| Msa1186030 | Msa1235950 | 0.821891 | 3.171759e-53 | -8.615850e-47 |
| Msa1213850 | Msa1235950 | 0.851984 | 6.216549e-61 | -8.615850e-47 |
| Msa1219760 | Msa1235950 | 0.833235 | 5.990904e-56 | -8.615850e-47 |
| Msa1221370 | Msa1235950 | -0.819506 | 1.120677e-52 | -8.615850e-47 |
| Msa0485220 | Msa1235950 | 0.862819 | 3.868783e-64 | -8.615850e-47 |
| Msa0488960 | Msa1235950 | 0.809559 | 1.782497e-50 | -8.615850e-47 |
| Msa0511760 | Msa1235950 | 0.887422 | 1.446871e-72 | -8.615850e-47 |
| Msa0516830 | Msa1235950 | 0.835684 | 1.454240e-56 | -8.615850e-47 |
| Msa0517480 | Msa1235950 | 0.831592 | 1.529915e-55 | -8.615850e-47 |
| Msa0521730 | Msa1235950 | 0.841957 | 3.466757e-58 | -8.615850e-47 |
| Msa0524680 | Msa1235950 | 0.834302 | 3.242162e-56 | -8.615850e-47 |
| Msa0528750 | Msa1235950 | 0.800126 | 1.667772e-48 | -8.615850e-47 |
| Msa0528820 | Msa1235950 | 0.818768 | 1.650060e-52 | -8.615850e-47 |
| Msa0547920 | Msa1235950 | 0.916871 | 1.056799e-85 | -8.615850e-47 |
| Msa0550490 | Msa1235950 | 0.831011 | 2.125464e-55 | -8.615850e-47 |
| Msa0552510 | Msa1235950 | 0.802154 | 6.417313e-49 | -8.615850e-47 |
| Msa0573550 | Msa1235950 | 0.884646 | 1.604751e-71 | -8.615850e-47 |
| Msa0574780 | Msa1235950 | 0.905347 | 4.726522e-80 | -8.615850e-47 |
| Msa0578010 | Msa1235950 | 0.846505 | 2.082516e-59 | -8.615850e-47 |
| Msa0579830 | Msa1235950 | 0.811522 | 6.711944e-51 | -8.615850e-47 |
| Msa0597240 | Msa1235950 | 0.867053 | 1.816744e-65 | -8.615850e-47 |
| Msa0844380 | Msa1235950 | 0.803589 | 3.243611e-49 | -8.615850e-47 |
| Msa0880050 | Msa1235950 | 0.800677 | 1.288216e-48 | -8.615850e-47 |
| Msa0929680 | Msa1235950 | 0.865796 | 4.554328e-65 | -8.615850e-47 |
| Msa0929700 | Msa1235950 | 0.921891 | 1.997126e-88 | -8.615850e-47 |
| Msa0930360 | Msa1235950 | 0.851674 | 7.610750e-61 | -8.615850e-47 |
| Msa0930790 | Msa1235950 | 0.848939 | 4.450240e-60 | -8.615850e-47 |
| Msa0930890 | Msa1235950 | 0.883598 | 3.916714e-71 | -8.615850e-47 |
| Msa0943180 | Msa1235950 | 0.811458 | 6.931116e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235950 | MtrunA17_Chr8g0345951 | 98.148 | 108 | 2 | 0 | 1 | 108 | 1 | 108 | 9.94e-73 | 211 |
| Msa1235950 | MtrunA17_Chr3g0127831 | 60.000 | 110 | 42 | 1 | 1 | 108 | 1 | 110 | 3.73e-29 | 101 |
| Msa1235950 | MtrunA17_Chr2g0311301 | 60.909 | 110 | 41 | 1 | 1 | 108 | 1 | 110 | 3.73e-29 | 101 |
| Msa1235950 | MtrunA17_Chr4g0013621 | 57.273 | 110 | 45 | 1 | 1 | 108 | 1 | 110 | 4.65e-28 | 98.6 |
| Msa1235950 | MtrunA17_Chr7g0276131 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 1.21e-23 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235950 | AT5G24510.1 | 57.391 | 115 | 38 | 4 | 1 | 108 | 1 | 111 | 1.10e-37 | 123 |
| Msa1235950 | AT1G01100.3 | 51.402 | 107 | 39 | 1 | 2 | 108 | 3 | 96 | 7.32e-32 | 108 |
| Msa1235950 | AT4G00810.1 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 3.06e-31 | 107 |
| Msa1235950 | AT4G00810.2 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 3.06e-31 | 107 |
| Msa1235950 | AT1G01100.4 | 53.636 | 110 | 48 | 1 | 2 | 108 | 3 | 112 | 6.67e-31 | 106 |
| Msa1235950 | AT1G01100.1 | 53.636 | 110 | 48 | 1 | 2 | 108 | 3 | 112 | 6.67e-31 | 106 |
| Msa1235950 | AT1G01100.2 | 53.636 | 110 | 48 | 1 | 2 | 108 | 3 | 112 | 6.67e-31 | 106 |
| Msa1235950 | AT5G47700.1 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 9.74e-31 | 105 |
| Msa1235950 | AT5G47700.2 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 9.74e-31 | 105 |
Find 42 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAAAATGGTAGGAATTT+AGG | 0.193757 | 8_2:-14349320 | None:intergenic |
| GTGGAGGCAGCAGCAGCAAC+TGG | 0.216487 | 8_2:-14350422 | None:intergenic |
| GAGATCGAAGAAGAAGAATT+AGG | 0.222732 | 8_2:-14349357 | None:intergenic |
| ACGTTAATGTTGAAGCTTAC+TGG | 0.234944 | 8_2:+14350306 | Msa1235950:CDS |
| TGGTGCTCCGGTTTCTGTTT+CGG | 0.321080 | 8_2:+14350397 | Msa1235950:CDS |
| AGATCGAAGAAGAAGAATTA+GGG | 0.332368 | 8_2:-14349356 | None:intergenic |
| GTCGTCGTCACTCTCATCCT+TGG | 0.357062 | 8_2:-14350572 | None:intergenic |
| ATCATCAAGGTTCTTCTTCT+CGG | 0.364681 | 8_2:-14350351 | None:intergenic |
| GTTCCTGTGTGCCCTTGTAT+TGG | 0.370081 | 8_2:+14350840 | Msa1235950:three_prime_UTR |
| TCTTCGATCTCATTCCTTCA+AGG | 0.385991 | 8_2:+14349369 | Msa1235950:five_prime_UTR |
| TTTCCTACGCTGCTGCAAAA+TGG | 0.386820 | 8_2:-14349332 | None:intergenic |
| AATACAAACATATACTTAGT+TGG | 0.430180 | 8_2:+14350878 | Msa1235950:three_prime_UTR |
| CGAAAAGTGGGTTACCTTGA+AGG | 0.447083 | 8_2:-14349383 | None:intergenic |
| ACTGGGGCCGAAACAGAAAC+CGG | 0.462684 | 8_2:-14350404 | None:intergenic |
| TCGTCGTCACTCTCATCCTT+GGG | 0.464875 | 8_2:-14350571 | None:intergenic |
| TGCCGCTGGAGGTGGTGCTC+CGG | 0.491299 | 8_2:+14350385 | Msa1235950:CDS |
| ATATTGAATGCCGCTGGAGG+TGG | 0.496313 | 8_2:+14350377 | Msa1235950:CDS |
| GCAAGTTTAGCGAATAAACT+TGG | 0.520693 | 8_2:-14350329 | None:intergenic |
| TGCTCCTATCGAGGAGAAGA+AGG | 0.520970 | 8_2:+14350454 | Msa1235950:CDS |
| TTATCTTTGATAATTTGAGT+TGG | 0.538348 | 8_2:+14350771 | Msa1235950:three_prime_UTR |
| TGGAGGCAGCAGCAGCAACT+GGG | 0.544694 | 8_2:-14350421 | None:intergenic |
| AGGAGCAGCAACTGCAGTGG+AGG | 0.545209 | 8_2:-14350438 | None:intergenic |
| GGATGAGAGTGACGACGACA+TGG | 0.547177 | 8_2:+14350576 | Msa1235950:CDS |
| GTTTGCAGCTTTCAACAAAG+TGG | 0.560297 | 8_2:-14350285 | None:intergenic |
| GTTAAGCAAACTCCAATACA+AGG | 0.570120 | 8_2:-14350852 | None:intergenic |
| CTACGCTGCTGCAAAATGGT+AGG | 0.580550 | 8_2:-14349328 | None:intergenic |
| GATTTGATATTGAATGCCGC+TGG | 0.580711 | 8_2:+14350371 | Msa1235950:CDS |
| AACCGGAGCACCACCTCCAG+CGG | 0.583475 | 8_2:-14350387 | None:intergenic |
| CGGCGATGTTATCATCATGA+AGG | 0.588233 | 8_2:-14349570 | None:intergenic |
| CATTCAATATCAAATCATCA+AGG | 0.592309 | 8_2:-14350364 | None:intergenic |
| TGCAGTTGCTGCTCCTATCG+AGG | 0.607768 | 8_2:+14350445 | Msa1235950:CDS |
| GGAGGCAGCAGCAGCAACTG+GGG | 0.621755 | 8_2:-14350420 | None:intergenic |
| CCTACCTTCTTCTCCTCGAT+AGG | 0.622145 | 8_2:-14350458 | None:intergenic |
| GATAGGAGCAGCAACTGCAG+TGG | 0.632714 | 8_2:-14350441 | None:intergenic |
| TGTAGTGTGAAAATGTCGAT+CGG | 0.636502 | 8_2:+14349517 | Msa1235950:intron |
| ACTCCAATACAAGGGCACAC+AGG | 0.641237 | 8_2:-14350843 | None:intergenic |
| ATTATCAAAGGATACAGTGA+CGG | 0.653291 | 8_2:-14349590 | None:intergenic |
| GATGAGAGTGACGACGACAT+GGG | 0.653294 | 8_2:+14350577 | Msa1235950:CDS |
| GTACTTACAGGAAGAACCCA+AGG | 0.654187 | 8_2:+14350555 | Msa1235950:intron |
| TTGATATTGAATGCCGCTGG+AGG | 0.659375 | 8_2:+14350374 | Msa1235950:CDS |
| GTAATGGGGTAGTTACTCAG+TGG | 0.696083 | 8_2:+14350657 | Msa1235950:three_prime_UTR |
| TTAAGCAAACTCCAATACAA+GGG | 0.712593 | 8_2:-14350851 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAACCTAATTTTTTTA+AGG | - | chr8_2:14349978-14349997 | None:intergenic | 10.0% |
| !!! | AAAAAAATTAGGTTTTTTAA+AGG | + | chr8_2:14349979-14349998 | Msa1235950:intron | 10.0% |
| !!! | TAAAATCAATTTTTATATAG+TGG | + | chr8_2:14350129-14350148 | Msa1235950:intron | 10.0% |
| !!! | AAAATCAATTTTTATATAGT+GGG | + | chr8_2:14350130-14350149 | Msa1235950:intron | 10.0% |
| !!! | TAAAAAACCTAATTTTTTTA+AGG | - | chr8_2:14349978-14349997 | None:intergenic | 10.0% |
| !!! | AAAAAAATTAGGTTTTTTAA+AGG | + | chr8_2:14349979-14349998 | Msa1235950:intron | 10.0% |
| !!! | TAAAATCAATTTTTATATAG+TGG | + | chr8_2:14350129-14350148 | Msa1235950:intron | 10.0% |
| !!! | AAAATCAATTTTTATATAGT+GGG | + | chr8_2:14350130-14350149 | Msa1235950:intron | 10.0% |
| !! | ATTACATTATCAATTATCAA+AGG | - | chr8_2:14349605-14349624 | None:intergenic | 15.0% |
| !!! | TTGAAAAAAAGAGATTTTTT+TGG | + | chr8_2:14349697-14349716 | Msa1235950:intron | 15.0% |
| !! | AAAAATTCAGTAATAATTTG+AGG | - | chr8_2:14349846-14349865 | None:intergenic | 15.0% |
| !!! | ATTATTACTGAATTTTTTAC+TGG | + | chr8_2:14349849-14349868 | Msa1235950:intron | 15.0% |
| !! | AATTAGTCCTTAAAAAAATT+AGG | + | chr8_2:14349968-14349987 | Msa1235950:intron | 15.0% |
| !!! | AAAAATTGATTTTACAACTT+TGG | - | chr8_2:14350123-14350142 | None:intergenic | 15.0% |
| !!! | ATTTTTCTAAGAATTAAAGA+AGG | + | chr8_2:14350799-14350818 | Msa1235950:three_prime_UTR | 15.0% |
| !! | ATTACATTATCAATTATCAA+AGG | - | chr8_2:14349605-14349624 | None:intergenic | 15.0% |
| !!! | TTGAAAAAAAGAGATTTTTT+TGG | + | chr8_2:14349697-14349716 | Msa1235950:intron | 15.0% |
| !! | AAAAATTCAGTAATAATTTG+AGG | - | chr8_2:14349846-14349865 | None:intergenic | 15.0% |
| !!! | ATTATTACTGAATTTTTTAC+TGG | + | chr8_2:14349849-14349868 | Msa1235950:intron | 15.0% |
| !! | AATTAGTCCTTAAAAAAATT+AGG | + | chr8_2:14349968-14349987 | Msa1235950:intron | 15.0% |
| !!! | AAAAATTGATTTTACAACTT+TGG | - | chr8_2:14350123-14350142 | None:intergenic | 15.0% |
| !!! | ATTTTTCTAAGAATTAAAGA+AGG | + | chr8_2:14350799-14350818 | Msa1235950:three_prime_UTR | 15.0% |
| !! | AAATTCAGAATATAATTCCT+AGG | + | chr8_2:14349907-14349926 | Msa1235950:intron | 20.0% |
| !!! | ACTAAATCAACAATTTTCTA+CGG | + | chr8_2:14350090-14350109 | Msa1235950:intron | 20.0% |
| !!! | TCTTATCTAATTGGTATTTT+TGG | + | chr8_2:14350530-14350549 | Msa1235950:intron | 20.0% |
| !!! | TTTGTTTTGATTGCATTATT+AGG | + | chr8_2:14350703-14350722 | Msa1235950:three_prime_UTR | 20.0% |
| !!! | TTATCTTTGATAATTTGAGT+TGG | + | chr8_2:14350771-14350790 | Msa1235950:three_prime_UTR | 20.0% |
| !! | AATACAAACATATACTTAGT+TGG | + | chr8_2:14350878-14350897 | Msa1235950:three_prime_UTR | 20.0% |
| !! | AAATTCAGAATATAATTCCT+AGG | + | chr8_2:14349907-14349926 | Msa1235950:intron | 20.0% |
| !!! | ACTAAATCAACAATTTTCTA+CGG | + | chr8_2:14350090-14350109 | Msa1235950:intron | 20.0% |
| !!! | TCTTATCTAATTGGTATTTT+TGG | + | chr8_2:14350530-14350549 | Msa1235950:intron | 20.0% |
| !!! | TTTGTTTTGATTGCATTATT+AGG | + | chr8_2:14350703-14350722 | Msa1235950:three_prime_UTR | 20.0% |
| !!! | TTATCTTTGATAATTTGAGT+TGG | + | chr8_2:14350771-14350790 | Msa1235950:three_prime_UTR | 20.0% |
| !! | AATACAAACATATACTTAGT+TGG | + | chr8_2:14350878-14350897 | Msa1235950:three_prime_UTR | 20.0% |
| ! | AGAAATAAACAACGAAAAGT+GGG | - | chr8_2:14349398-14349417 | None:intergenic | 25.0% |
| ! | TAGAAATAAACAACGAAAAG+TGG | - | chr8_2:14349399-14349418 | None:intergenic | 25.0% |
| ! | TAATGAATTTAGAAGATGCT+AGG | + | chr8_2:14349665-14349684 | Msa1235950:intron | 25.0% |
| !!! | AGATTTTTTTGGATGATACA+AGG | + | chr8_2:14349708-14349727 | Msa1235950:intron | 25.0% |
| !!! | GATTTTTTTGGATGATACAA+GGG | + | chr8_2:14349709-14349728 | Msa1235950:intron | 25.0% |
| !!! | ATTTTTTTGGATGATACAAG+GGG | + | chr8_2:14349710-14349729 | Msa1235950:intron | 25.0% |
| !!! | ATTTTTATATAGTGGGAATC+TGG | + | chr8_2:14350137-14350156 | Msa1235950:intron | 25.0% |
| !!! | TTTTTATATAGTGGGAATCT+GGG | + | chr8_2:14350138-14350157 | Msa1235950:intron | 25.0% |
| !!! | GAATTTTGTTTTGGTGAATA+AGG | + | chr8_2:14350165-14350184 | Msa1235950:intron | 25.0% |
| ! | CATTCAATATCAAATCATCA+AGG | - | chr8_2:14350367-14350386 | None:intergenic | 25.0% |
| !! | ATCTATTCTGATTTTTGTAC+TGG | + | chr8_2:14350635-14350654 | Msa1235950:three_prime_UTR | 25.0% |
| !!! | TGCTTTTGACTTAAGAATAT+GGG | + | chr8_2:14350740-14350759 | Msa1235950:three_prime_UTR | 25.0% |
| ! | AGAAATAAACAACGAAAAGT+GGG | - | chr8_2:14349398-14349417 | None:intergenic | 25.0% |
| ! | TAGAAATAAACAACGAAAAG+TGG | - | chr8_2:14349399-14349418 | None:intergenic | 25.0% |
| ! | TAATGAATTTAGAAGATGCT+AGG | + | chr8_2:14349665-14349684 | Msa1235950:intron | 25.0% |
| !!! | AGATTTTTTTGGATGATACA+AGG | + | chr8_2:14349708-14349727 | Msa1235950:intron | 25.0% |
| !!! | GATTTTTTTGGATGATACAA+GGG | + | chr8_2:14349709-14349728 | Msa1235950:intron | 25.0% |
| !!! | ATTTTTTTGGATGATACAAG+GGG | + | chr8_2:14349710-14349729 | Msa1235950:intron | 25.0% |
| !!! | ATTTTTATATAGTGGGAATC+TGG | + | chr8_2:14350137-14350156 | Msa1235950:intron | 25.0% |
| !!! | TTTTTATATAGTGGGAATCT+GGG | + | chr8_2:14350138-14350157 | Msa1235950:intron | 25.0% |
| !!! | GAATTTTGTTTTGGTGAATA+AGG | + | chr8_2:14350165-14350184 | Msa1235950:intron | 25.0% |
| ! | CATTCAATATCAAATCATCA+AGG | - | chr8_2:14350367-14350386 | None:intergenic | 25.0% |
| !! | ATCTATTCTGATTTTTGTAC+TGG | + | chr8_2:14350635-14350654 | Msa1235950:three_prime_UTR | 25.0% |
| !!! | TGCTTTTGACTTAAGAATAT+GGG | + | chr8_2:14350740-14350759 | Msa1235950:three_prime_UTR | 25.0% |
| AGATCGAAGAAGAAGAATTA+GGG | - | chr8_2:14349359-14349378 | None:intergenic | 30.0% | |
| ATTATCAAAGGATACAGTGA+CGG | - | chr8_2:14349593-14349612 | None:intergenic | 30.0% | |
| ATTTAGAAGATGCTAGGAAT+TGG | + | chr8_2:14349671-14349690 | Msa1235950:intron | 30.0% | |
| TTTAGAAGATGCTAGGAATT+GGG | + | chr8_2:14349672-14349691 | Msa1235950:intron | 30.0% | |
| AATGACAATTAACAACTCCT+AGG | - | chr8_2:14349927-14349946 | None:intergenic | 30.0% | |
| TAAGTGCTAGTTAAAGTTCT+TGG | + | chr8_2:14350017-14350036 | Msa1235950:intron | 30.0% | |
| TAAAGTTCTTGGATAGAGTT+AGG | + | chr8_2:14350028-14350047 | Msa1235950:intron | 30.0% | |
| ! | ATCAACAATTTTCTACGGTA+AGG | + | chr8_2:14350095-14350114 | Msa1235950:intron | 30.0% |
| ! | TCAACAATTTTCTACGGTAA+GGG | + | chr8_2:14350096-14350115 | Msa1235950:intron | 30.0% |
| !!! | CTGGGTTTTGAATTTTGTTT+TGG | + | chr8_2:14350156-14350175 | Msa1235950:intron | 30.0% |
| !!! | AGATAGCGTGTTTTAAAGAT+TGG | + | chr8_2:14350224-14350243 | Msa1235950:intron | 30.0% |
| TCCTTAAGTCATTGTTGATA+GGG | + | chr8_2:14350251-14350270 | Msa1235950:intron | 30.0% | |
| TGTTGGTCATCTTATCTAAT+TGG | + | chr8_2:14350521-14350540 | Msa1235950:intron | 30.0% | |
| !!! | GTATTTTTGGTTGTACTTAC+AGG | + | chr8_2:14350543-14350562 | Msa1235950:intron | 30.0% |
| !! | TCTGATTTTTGTACTGGTAA+TGG | + | chr8_2:14350641-14350660 | Msa1235950:three_prime_UTR | 30.0% |
| !! | CTGATTTTTGTACTGGTAAT+GGG | + | chr8_2:14350642-14350661 | Msa1235950:three_prime_UTR | 30.0% |
| !! | TGATTTTTGTACTGGTAATG+GGG | + | chr8_2:14350643-14350662 | Msa1235950:three_prime_UTR | 30.0% |
| !!! | TCAGTGGAATTCCTTTTTTT+GGG | + | chr8_2:14350673-14350692 | Msa1235950:three_prime_UTR | 30.0% |
| CAAAATTGAGTCCCAAAAAA+AGG | - | chr8_2:14350687-14350706 | None:intergenic | 30.0% | |
| !!! | GTGCTTTTGACTTAAGAATA+TGG | + | chr8_2:14350739-14350758 | Msa1235950:three_prime_UTR | 30.0% |
| TTAAGCAAACTCCAATACAA+GGG | - | chr8_2:14350854-14350873 | None:intergenic | 30.0% | |
| AGATCGAAGAAGAAGAATTA+GGG | - | chr8_2:14349359-14349378 | None:intergenic | 30.0% | |
| ATTATCAAAGGATACAGTGA+CGG | - | chr8_2:14349593-14349612 | None:intergenic | 30.0% | |
| ATTTAGAAGATGCTAGGAAT+TGG | + | chr8_2:14349671-14349690 | Msa1235950:intron | 30.0% | |
| TTTAGAAGATGCTAGGAATT+GGG | + | chr8_2:14349672-14349691 | Msa1235950:intron | 30.0% | |
| AATGACAATTAACAACTCCT+AGG | - | chr8_2:14349927-14349946 | None:intergenic | 30.0% | |
| TAAGTGCTAGTTAAAGTTCT+TGG | + | chr8_2:14350017-14350036 | Msa1235950:intron | 30.0% | |
| TAAAGTTCTTGGATAGAGTT+AGG | + | chr8_2:14350028-14350047 | Msa1235950:intron | 30.0% | |
| ! | ATCAACAATTTTCTACGGTA+AGG | + | chr8_2:14350095-14350114 | Msa1235950:intron | 30.0% |
| ! | TCAACAATTTTCTACGGTAA+GGG | + | chr8_2:14350096-14350115 | Msa1235950:intron | 30.0% |
| !!! | CTGGGTTTTGAATTTTGTTT+TGG | + | chr8_2:14350156-14350175 | Msa1235950:intron | 30.0% |
| !!! | AGATAGCGTGTTTTAAAGAT+TGG | + | chr8_2:14350224-14350243 | Msa1235950:intron | 30.0% |
| TCCTTAAGTCATTGTTGATA+GGG | + | chr8_2:14350251-14350270 | Msa1235950:intron | 30.0% | |
| TGTTGGTCATCTTATCTAAT+TGG | + | chr8_2:14350521-14350540 | Msa1235950:intron | 30.0% | |
| !!! | GTATTTTTGGTTGTACTTAC+AGG | + | chr8_2:14350543-14350562 | Msa1235950:intron | 30.0% |
| !! | TCTGATTTTTGTACTGGTAA+TGG | + | chr8_2:14350641-14350660 | Msa1235950:three_prime_UTR | 30.0% |
| !! | CTGATTTTTGTACTGGTAAT+GGG | + | chr8_2:14350642-14350661 | Msa1235950:three_prime_UTR | 30.0% |
| !! | TGATTTTTGTACTGGTAATG+GGG | + | chr8_2:14350643-14350662 | Msa1235950:three_prime_UTR | 30.0% |
| !!! | TCAGTGGAATTCCTTTTTTT+GGG | + | chr8_2:14350673-14350692 | Msa1235950:three_prime_UTR | 30.0% |
| CAAAATTGAGTCCCAAAAAA+AGG | - | chr8_2:14350687-14350706 | None:intergenic | 30.0% | |
| !!! | GTGCTTTTGACTTAAGAATA+TGG | + | chr8_2:14350739-14350758 | Msa1235950:three_prime_UTR | 30.0% |
| TTAAGCAAACTCCAATACAA+GGG | - | chr8_2:14350854-14350873 | None:intergenic | 30.0% | |
| CTGCAAAATGGTAGGAATTT+AGG | - | chr8_2:14349323-14349342 | None:intergenic | 35.0% | |
| GAGATCGAAGAAGAAGAATT+AGG | - | chr8_2:14349360-14349379 | None:intergenic | 35.0% | |
| TGTAGTGTGAAAATGTCGAT+CGG | + | chr8_2:14349517-14349536 | Msa1235950:intron | 35.0% | |
| TTTGGTGAATAAGGAAAGTG+TGG | + | chr8_2:14350174-14350193 | Msa1235950:intron | 35.0% | |
| ! | AATAAGGAAAGTGTGGTGTA+AGG | + | chr8_2:14350181-14350200 | Msa1235950:intron | 35.0% |
| ! | ATAAGGAAAGTGTGGTGTAA+GGG | + | chr8_2:14350182-14350201 | Msa1235950:intron | 35.0% |
| CTCCTTAAGTCATTGTTGAT+AGG | + | chr8_2:14350250-14350269 | Msa1235950:intron | 35.0% | |
| ACCCTATCAACAATGACTTA+AGG | - | chr8_2:14350255-14350274 | None:intergenic | 35.0% | |
| ACGTTAATGTTGAAGCTTAC+TGG | + | chr8_2:14350306-14350325 | Msa1235950:CDS | 35.0% | |
| GCAAGTTTAGCGAATAAACT+TGG | - | chr8_2:14350332-14350351 | None:intergenic | 35.0% | |
| ATCATCAAGGTTCTTCTTCT+CGG | - | chr8_2:14350354-14350373 | None:intergenic | 35.0% | |
| GAACTTTGTCTTCTGTTTGT+TGG | + | chr8_2:14350504-14350523 | Msa1235950:intron | 35.0% | |
| !!! | CTCAGTGGAATTCCTTTTTT+TGG | + | chr8_2:14350672-14350691 | Msa1235950:three_prime_UTR | 35.0% |
| GTTAAGCAAACTCCAATACA+AGG | - | chr8_2:14350855-14350874 | None:intergenic | 35.0% | |
| CTGCAAAATGGTAGGAATTT+AGG | - | chr8_2:14349323-14349342 | None:intergenic | 35.0% | |
| GAGATCGAAGAAGAAGAATT+AGG | - | chr8_2:14349360-14349379 | None:intergenic | 35.0% | |
| TGTAGTGTGAAAATGTCGAT+CGG | + | chr8_2:14349517-14349536 | Msa1235950:intron | 35.0% | |
| TTTGGTGAATAAGGAAAGTG+TGG | + | chr8_2:14350174-14350193 | Msa1235950:intron | 35.0% | |
| ! | AATAAGGAAAGTGTGGTGTA+AGG | + | chr8_2:14350181-14350200 | Msa1235950:intron | 35.0% |
| ! | ATAAGGAAAGTGTGGTGTAA+GGG | + | chr8_2:14350182-14350201 | Msa1235950:intron | 35.0% |
| CTCCTTAAGTCATTGTTGAT+AGG | + | chr8_2:14350250-14350269 | Msa1235950:intron | 35.0% | |
| ACCCTATCAACAATGACTTA+AGG | - | chr8_2:14350255-14350274 | None:intergenic | 35.0% | |
| ACGTTAATGTTGAAGCTTAC+TGG | + | chr8_2:14350306-14350325 | Msa1235950:CDS | 35.0% | |
| GCAAGTTTAGCGAATAAACT+TGG | - | chr8_2:14350332-14350351 | None:intergenic | 35.0% | |
| ATCATCAAGGTTCTTCTTCT+CGG | - | chr8_2:14350354-14350373 | None:intergenic | 35.0% | |
| GAACTTTGTCTTCTGTTTGT+TGG | + | chr8_2:14350504-14350523 | Msa1235950:intron | 35.0% | |
| !!! | CTCAGTGGAATTCCTTTTTT+TGG | + | chr8_2:14350672-14350691 | Msa1235950:three_prime_UTR | 35.0% |
| GTTAAGCAAACTCCAATACA+AGG | - | chr8_2:14350855-14350874 | None:intergenic | 35.0% | |
| TCTTCGATCTCATTCCTTCA+AGG | + | chr8_2:14349369-14349388 | Msa1235950:five_prime_UTR | 40.0% | |
| GATGATACAAGGGGCTATAT+AGG | + | chr8_2:14349719-14349738 | Msa1235950:intron | 40.0% | |
| !!! | TCGATCAGAAGTGTCGTTTT+AGG | - | chr8_2:14349753-14349772 | None:intergenic | 40.0% |
| GTTTGCAGCTTTCAACAAAG+TGG | - | chr8_2:14350288-14350307 | None:intergenic | 40.0% | |
| GATTTGATATTGAATGCCGC+TGG | + | chr8_2:14350371-14350390 | Msa1235950:CDS | 40.0% | |
| ! | AGGAGAAGAAGGTAGGTTTT+TGG | + | chr8_2:14350465-14350484 | Msa1235950:intron | 40.0% |
| TCTTCGATCTCATTCCTTCA+AGG | + | chr8_2:14349369-14349388 | Msa1235950:five_prime_UTR | 40.0% | |
| GATGATACAAGGGGCTATAT+AGG | + | chr8_2:14349719-14349738 | Msa1235950:intron | 40.0% | |
| !!! | TCGATCAGAAGTGTCGTTTT+AGG | - | chr8_2:14349753-14349772 | None:intergenic | 40.0% |
| GTTTGCAGCTTTCAACAAAG+TGG | - | chr8_2:14350288-14350307 | None:intergenic | 40.0% | |
| GATTTGATATTGAATGCCGC+TGG | + | chr8_2:14350371-14350390 | Msa1235950:CDS | 40.0% | |
| ! | AGGAGAAGAAGGTAGGTTTT+TGG | + | chr8_2:14350465-14350484 | Msa1235950:intron | 40.0% |
| TTTCCTACGCTGCTGCAAAA+TGG | - | chr8_2:14349335-14349354 | None:intergenic | 45.0% | |
| !! | CGAAAAGTGGGTTACCTTGA+AGG | - | chr8_2:14349386-14349405 | None:intergenic | 45.0% |
| CGGCGATGTTATCATCATGA+AGG | - | chr8_2:14349573-14349592 | None:intergenic | 45.0% | |
| CTTCTGATCGAAGTTGTGTC+TGG | + | chr8_2:14349762-14349781 | Msa1235950:intron | 45.0% | |
| TTGATATTGAATGCCGCTGG+AGG | + | chr8_2:14350374-14350393 | Msa1235950:CDS | 45.0% | |
| GTACTTACAGGAAGAACCCA+AGG | + | chr8_2:14350555-14350574 | Msa1235950:intron | 45.0% | |
| ! | GTAATGGGGTAGTTACTCAG+TGG | + | chr8_2:14350657-14350676 | Msa1235950:three_prime_UTR | 45.0% |
| TTTCCTACGCTGCTGCAAAA+TGG | - | chr8_2:14349335-14349354 | None:intergenic | 45.0% | |
| !! | CGAAAAGTGGGTTACCTTGA+AGG | - | chr8_2:14349386-14349405 | None:intergenic | 45.0% |
| CGGCGATGTTATCATCATGA+AGG | - | chr8_2:14349573-14349592 | None:intergenic | 45.0% | |
| CTTCTGATCGAAGTTGTGTC+TGG | + | chr8_2:14349762-14349781 | Msa1235950:intron | 45.0% | |
| TTGATATTGAATGCCGCTGG+AGG | + | chr8_2:14350374-14350393 | Msa1235950:CDS | 45.0% | |
| GTACTTACAGGAAGAACCCA+AGG | + | chr8_2:14350555-14350574 | Msa1235950:intron | 45.0% | |
| ! | GTAATGGGGTAGTTACTCAG+TGG | + | chr8_2:14350657-14350676 | Msa1235950:three_prime_UTR | 45.0% |
| !!! | TTTTTTTATTTTCTTATTTT+AGG | + | chr8_2:14350067-14350086 | Msa1235950:intron | 5.0% |
| !!! | TTTTTTTATTTTCTTATTTT+AGG | + | chr8_2:14350067-14350086 | Msa1235950:intron | 5.0% |
| CTACGCTGCTGCAAAATGGT+AGG | - | chr8_2:14349331-14349350 | None:intergenic | 50.0% | |
| ! | CTACCATTTTGCAGCAGCGT+AGG | + | chr8_2:14349329-14349348 | Msa1235950:five_prime_UTR | 50.0% |
| TGGTGTGTGTCAGTGCTTCA+TGG | + | chr8_2:14349869-14349888 | Msa1235950:intron | 50.0% | |
| ATATTGAATGCCGCTGGAGG+TGG | + | chr8_2:14350377-14350396 | Msa1235950:CDS | 50.0% | |
| TGGTGCTCCGGTTTCTGTTT+CGG | + | chr8_2:14350397-14350416 | Msa1235950:CDS | 50.0% | |
| TGCTCCTATCGAGGAGAAGA+AGG | + | chr8_2:14350454-14350473 | Msa1235950:CDS | 50.0% | |
| CCTACCTTCTTCTCCTCGAT+AGG | - | chr8_2:14350461-14350480 | None:intergenic | 50.0% | |
| CCTATCGAGGAGAAGAAGGT+AGG | + | chr8_2:14350458-14350477 | Msa1235950:intron | 50.0% | |
| TCGTCGTCACTCTCATCCTT+GGG | - | chr8_2:14350574-14350593 | None:intergenic | 50.0% | |
| GATGAGAGTGACGACGACAT+GGG | + | chr8_2:14350577-14350596 | Msa1235950:CDS | 50.0% | |
| GTTCCTGTGTGCCCTTGTAT+TGG | + | chr8_2:14350840-14350859 | Msa1235950:three_prime_UTR | 50.0% | |
| ! | ACTCCAATACAAGGGCACAC+AGG | - | chr8_2:14350846-14350865 | None:intergenic | 50.0% |
| CTACGCTGCTGCAAAATGGT+AGG | - | chr8_2:14349331-14349350 | None:intergenic | 50.0% | |
| ! | CTACCATTTTGCAGCAGCGT+AGG | + | chr8_2:14349329-14349348 | Msa1235950:five_prime_UTR | 50.0% |
| TGGTGTGTGTCAGTGCTTCA+TGG | + | chr8_2:14349869-14349888 | Msa1235950:intron | 50.0% | |
| ATATTGAATGCCGCTGGAGG+TGG | + | chr8_2:14350377-14350396 | Msa1235950:CDS | 50.0% | |
| TGGTGCTCCGGTTTCTGTTT+CGG | + | chr8_2:14350397-14350416 | Msa1235950:CDS | 50.0% | |
| TGCTCCTATCGAGGAGAAGA+AGG | + | chr8_2:14350454-14350473 | Msa1235950:CDS | 50.0% | |
| CCTACCTTCTTCTCCTCGAT+AGG | - | chr8_2:14350461-14350480 | None:intergenic | 50.0% | |
| CCTATCGAGGAGAAGAAGGT+AGG | + | chr8_2:14350458-14350477 | Msa1235950:intron | 50.0% | |
| TCGTCGTCACTCTCATCCTT+GGG | - | chr8_2:14350574-14350593 | None:intergenic | 50.0% | |
| GATGAGAGTGACGACGACAT+GGG | + | chr8_2:14350577-14350596 | Msa1235950:CDS | 50.0% | |
| GTTCCTGTGTGCCCTTGTAT+TGG | + | chr8_2:14350840-14350859 | Msa1235950:three_prime_UTR | 50.0% | |
| ! | ACTCCAATACAAGGGCACAC+AGG | - | chr8_2:14350846-14350865 | None:intergenic | 50.0% |
| ACTGGGGCCGAAACAGAAAC+CGG | - | chr8_2:14350407-14350426 | None:intergenic | 55.0% | |
| GATAGGAGCAGCAACTGCAG+TGG | - | chr8_2:14350444-14350463 | None:intergenic | 55.0% | |
| TGCAGTTGCTGCTCCTATCG+AGG | + | chr8_2:14350445-14350464 | Msa1235950:CDS | 55.0% | |
| GTCGTCGTCACTCTCATCCT+TGG | - | chr8_2:14350575-14350594 | None:intergenic | 55.0% | |
| GGATGAGAGTGACGACGACA+TGG | + | chr8_2:14350576-14350595 | Msa1235950:CDS | 55.0% | |
| ACTGGGGCCGAAACAGAAAC+CGG | - | chr8_2:14350407-14350426 | None:intergenic | 55.0% | |
| GATAGGAGCAGCAACTGCAG+TGG | - | chr8_2:14350444-14350463 | None:intergenic | 55.0% | |
| TGCAGTTGCTGCTCCTATCG+AGG | + | chr8_2:14350445-14350464 | Msa1235950:CDS | 55.0% | |
| GTCGTCGTCACTCTCATCCT+TGG | - | chr8_2:14350575-14350594 | None:intergenic | 55.0% | |
| GGATGAGAGTGACGACGACA+TGG | + | chr8_2:14350576-14350595 | Msa1235950:CDS | 55.0% | |
| TGGAGGCAGCAGCAGCAACT+GGG | - | chr8_2:14350424-14350443 | None:intergenic | 60.0% | |
| AGGAGCAGCAACTGCAGTGG+AGG | - | chr8_2:14350441-14350460 | None:intergenic | 60.0% | |
| TGGAGGCAGCAGCAGCAACT+GGG | - | chr8_2:14350424-14350443 | None:intergenic | 60.0% | |
| AGGAGCAGCAACTGCAGTGG+AGG | - | chr8_2:14350441-14350460 | None:intergenic | 60.0% | |
| ! | AACCGGAGCACCACCTCCAG+CGG | - | chr8_2:14350390-14350409 | None:intergenic | 65.0% |
| GGAGGCAGCAGCAGCAACTG+GGG | - | chr8_2:14350423-14350442 | None:intergenic | 65.0% | |
| GTGGAGGCAGCAGCAGCAAC+TGG | - | chr8_2:14350425-14350444 | None:intergenic | 65.0% | |
| ! | AACCGGAGCACCACCTCCAG+CGG | - | chr8_2:14350390-14350409 | None:intergenic | 65.0% |
| GGAGGCAGCAGCAGCAACTG+GGG | - | chr8_2:14350423-14350442 | None:intergenic | 65.0% | |
| GTGGAGGCAGCAGCAGCAAC+TGG | - | chr8_2:14350425-14350444 | None:intergenic | 65.0% | |
| TGCCGCTGGAGGTGGTGCTC+CGG | + | chr8_2:14350385-14350404 | Msa1235950:CDS | 70.0% | |
| TGCCGCTGGAGGTGGTGCTC+CGG | + | chr8_2:14350385-14350404 | Msa1235950:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 14349315 | 14350908 | 14349315 | ID=Msa1235950;Name=Msa1235950 |
| chr8_2 | mRNA | 14349315 | 14350908 | 14349315 | ID=Msa1235950-mRNA-1;Parent=Msa1235950;Name=Msa1235950-mRNA-1;_AED=0.16;_eAED=0.16;_QI=83|1|1|1|0.66|0.5|4|290|108 |
| chr8_2 | exon | 14349315 | 14349390 | 14349315 | ID=Msa1235950-mRNA-1:exon:5455;Parent=Msa1235950-mRNA-1 |
| chr8_2 | exon | 14349522 | 14349597 | 14349522 | ID=Msa1235950-mRNA-1:exon:5456;Parent=Msa1235950-mRNA-1 |
| chr8_2 | exon | 14350272 | 14350475 | 14350272 | ID=Msa1235950-mRNA-1:exon:5457;Parent=Msa1235950-mRNA-1 |
| chr8_2 | exon | 14350565 | 14350908 | 14350565 | ID=Msa1235950-mRNA-1:exon:5458;Parent=Msa1235950-mRNA-1 |
| chr8_2 | five_prime_UTR | 14349315 | 14349390 | 14349315 | ID=Msa1235950-mRNA-1:five_prime_utr;Parent=Msa1235950-mRNA-1 |
| chr8_2 | five_prime_UTR | 14349522 | 14349528 | 14349522 | ID=Msa1235950-mRNA-1:five_prime_utr;Parent=Msa1235950-mRNA-1 |
| chr8_2 | CDS | 14349529 | 14349597 | 14349529 | ID=Msa1235950-mRNA-1:cds;Parent=Msa1235950-mRNA-1 |
| chr8_2 | CDS | 14350272 | 14350475 | 14350272 | ID=Msa1235950-mRNA-1:cds;Parent=Msa1235950-mRNA-1 |
| chr8_2 | CDS | 14350565 | 14350618 | 14350565 | ID=Msa1235950-mRNA-1:cds;Parent=Msa1235950-mRNA-1 |
| chr8_2 | three_prime_UTR | 14350619 | 14350908 | 14350619 | ID=Msa1235950-mRNA-1:three_prime_utr;Parent=Msa1235950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
