Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235980 | XP_013444548.1 | 98.148 | 108 | 2 | 0 | 1 | 108 | 1 | 108 | 1.08e-68 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235980 | sp|O23095|RLA12_ARATH | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 3.01e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1235980 | 0.864739 | 9.786892e-65 | -8.615850e-47 |
| Msa0002430 | Msa1235980 | 0.820010 | 8.597761e-53 | -8.615850e-47 |
| Msa0003330 | Msa1235980 | 0.873443 | 1.464150e-67 | -8.615850e-47 |
| Msa0027590 | Msa1235980 | 0.880233 | 6.496493e-70 | -8.615850e-47 |
| Msa0037230 | Msa1235980 | 0.808780 | 2.617073e-50 | -8.615850e-47 |
| Msa0042510 | Msa1235980 | 0.849579 | 2.953169e-60 | -8.615850e-47 |
| Msa0071760 | Msa1235980 | 0.829579 | 4.756709e-55 | -8.615850e-47 |
| Msa0075350 | Msa1235980 | 0.822677 | 2.084005e-53 | -8.615850e-47 |
| Msa0079560 | Msa1235980 | 0.846963 | 1.560547e-59 | -8.615850e-47 |
| Msa0086160 | Msa1235980 | 0.819328 | 1.230172e-52 | -8.615850e-47 |
| Msa0089540 | Msa1235980 | 0.818980 | 1.476971e-52 | -8.615850e-47 |
| Msa0098210 | Msa1235980 | 0.808263 | 3.375314e-50 | -8.615850e-47 |
| Msa0114600 | Msa1235980 | 0.820364 | 7.133710e-53 | -8.615850e-47 |
| Msa0116600 | Msa1235980 | 0.801133 | 1.039596e-48 | -8.615850e-47 |
| Msa0602900 | Msa1235980 | 0.919730 | 3.124021e-87 | -8.615850e-47 |
| Msa0605600 | Msa1235980 | 0.849387 | 3.341487e-60 | -8.615850e-47 |
| Msa0605890 | Msa1235980 | 0.867665 | 1.157456e-65 | -8.615850e-47 |
| Msa0609120 | Msa1235980 | 0.829517 | 4.923913e-55 | -8.615850e-47 |
| Msa0610000 | Msa1235980 | 0.802995 | 4.305114e-49 | -8.615850e-47 |
| Msa0619230 | Msa1235980 | 0.890457 | 9.680150e-74 | -8.615850e-47 |
| Msa0621190 | Msa1235980 | 0.865282 | 6.611120e-65 | -8.615850e-47 |
| Msa0643960 | Msa1235980 | 0.918361 | 1.713958e-86 | -8.615850e-47 |
| Msa0648670 | Msa1235980 | 0.811063 | 8.445081e-51 | -8.615850e-47 |
| Msa0649890 | Msa1235980 | 0.831599 | 1.523370e-55 | -8.615850e-47 |
| Msa0656450 | Msa1235980 | 0.869659 | 2.623822e-66 | -8.615850e-47 |
| Msa0663400 | Msa1235980 | 0.806716 | 7.185728e-50 | -8.615850e-47 |
| Msa0686550 | Msa1235980 | 0.841281 | 5.226958e-58 | -8.615850e-47 |
| Msa0691760 | Msa1235980 | 0.856836 | 2.456811e-62 | -8.615850e-47 |
| Msa0694400 | Msa1235980 | 0.906713 | 1.105216e-80 | -8.615850e-47 |
| Msa0700370 | Msa1235980 | 0.841227 | 5.401224e-58 | -8.615850e-47 |
| Msa0704860 | Msa1235980 | 0.816836 | 4.503448e-52 | -8.615850e-47 |
| Msa0708630 | Msa1235980 | 0.876483 | 1.347743e-68 | -8.615850e-47 |
| Msa0741510 | Msa1235980 | 0.827905 | 1.208165e-54 | -8.615850e-47 |
| Msa0748350 | Msa1235980 | 0.830766 | 2.441675e-55 | -8.615850e-47 |
| Msa0788380 | Msa1235980 | 0.809592 | 1.753860e-50 | -8.615850e-47 |
| Msa0790450 | Msa1235980 | 0.854349 | 1.306136e-61 | -8.615850e-47 |
| Msa0798590 | Msa1235980 | 0.808337 | 3.254413e-50 | -8.615850e-47 |
| Msa0834220 | Msa1235980 | 0.870873 | 1.049976e-66 | -8.615850e-47 |
| Msa0123290 | Msa1235980 | 0.852703 | 3.879680e-61 | -8.615850e-47 |
| Msa0127230 | Msa1235980 | 0.837334 | 5.528000e-57 | -8.615850e-47 |
| Msa0128330 | Msa1235980 | 0.855446 | 6.275647e-62 | -8.615850e-47 |
| Msa0132460 | Msa1235980 | 0.875582 | 2.750488e-68 | -8.615850e-47 |
| Msa0134580 | Msa1235980 | 0.842569 | 2.386761e-58 | -8.615850e-47 |
| Msa0136400 | Msa1235980 | 0.821818 | 3.297680e-53 | -8.615850e-47 |
| Msa0167800 | Msa1235980 | -0.801160 | 1.026301e-48 | -8.615850e-47 |
| Msa0167860 | Msa1235980 | 0.905963 | 2.462118e-80 | -8.615850e-47 |
| Msa0168320 | Msa1235980 | 0.852743 | 3.778234e-61 | -8.615850e-47 |
| Msa0174580 | Msa1235980 | 0.843465 | 1.378445e-58 | -8.615850e-47 |
| Msa0182050 | Msa1235980 | 0.880510 | 5.171821e-70 | -8.615850e-47 |
| Msa0182100 | Msa1235980 | 0.903708 | 2.622618e-79 | -8.615850e-47 |
| Msa0183840 | Msa1235980 | 0.803261 | 3.792157e-49 | -8.615850e-47 |
| Msa0188740 | Msa1235980 | 0.847997 | 8.111875e-60 | -8.615850e-47 |
| Msa0191450 | Msa1235980 | 0.838156 | 3.399508e-57 | -8.615850e-47 |
| Msa0191550 | Msa1235980 | 0.853006 | 3.177230e-61 | -8.615850e-47 |
| Msa0192300 | Msa1235980 | 0.896999 | 2.149730e-76 | -8.615850e-47 |
| Msa0192490 | Msa1235980 | 0.817063 | 4.005353e-52 | -8.615850e-47 |
| Msa0195030 | Msa1235980 | 0.844035 | 9.698449e-59 | -8.615850e-47 |
| Msa0219090 | Msa1235980 | 0.821170 | 4.655909e-53 | -8.615850e-47 |
| Msa0233550 | Msa1235980 | 0.880314 | 6.079866e-70 | -8.615850e-47 |
| Msa0234850 | Msa1235980 | 0.803702 | 3.072627e-49 | -8.615850e-47 |
| Msa0235050 | Msa1235980 | 0.827017 | 1.972882e-54 | -8.615850e-47 |
| Msa0237180 | Msa1235980 | 0.843049 | 1.779238e-58 | -8.615850e-47 |
| Msa1235950 | Msa1235980 | 0.998190 | 2.291756e-258 | -8.615850e-47 |
| Msa1235980 | Msa1237040 | 0.896322 | 4.121347e-76 | -8.615850e-47 |
| Msa1235980 | Msa1240270 | 0.809486 | 1.848054e-50 | -8.615850e-47 |
| Msa1235980 | Msa1257450 | 0.803805 | 2.925137e-49 | -8.615850e-47 |
| Msa1235980 | Msa1258540 | 0.840395 | 8.921548e-58 | -8.615850e-47 |
| Msa1235980 | Msa1270640 | 0.830337 | 3.107993e-55 | -8.615850e-47 |
| Msa1235980 | Msa1270710 | 0.832990 | 6.896301e-56 | -8.615850e-47 |
| Msa1235980 | Msa1278130 | 0.815126 | 1.084749e-51 | -8.615850e-47 |
| Msa1235980 | Msa1284060 | 0.825662 | 4.147824e-54 | -8.615850e-47 |
| Msa1235980 | Msa1284800 | 0.828633 | 8.064997e-55 | -8.615850e-47 |
| Msa1235980 | Msa1296090 | 0.804831 | 1.788486e-49 | -8.615850e-47 |
| Msa1235980 | Msa1316100 | 0.961939 | 2.748847e-120 | -8.615850e-47 |
| Msa1235980 | Msa1317390 | 0.928527 | 2.545402e-92 | -8.615850e-47 |
| Msa1235980 | Msa1329930 | 0.814312 | 1.642691e-51 | -8.615850e-47 |
| Msa1235980 | Msa1333370 | 0.840186 | 1.011721e-57 | -8.615850e-47 |
| Msa1235980 | Msa1341780 | 0.841359 | 4.985433e-58 | -8.615850e-47 |
| Msa1235980 | Msa1344160 | 0.832434 | 9.472923e-56 | -8.615850e-47 |
| Msa1235980 | Msa1344190 | 0.830531 | 2.786453e-55 | -8.615850e-47 |
| Msa1235980 | Msa1351020 | 0.891313 | 4.453502e-74 | -8.615850e-47 |
| Msa1235980 | Msa1351910 | 0.815849 | 7.489309e-52 | -8.615850e-47 |
| Msa1235980 | Msa1353300 | 0.826934 | 2.065271e-54 | -8.615850e-47 |
| Msa1235980 | Msa1358710 | 0.839191 | 1.836237e-57 | -8.615850e-47 |
| Msa1235980 | Msa1363910 | 0.809230 | 2.096822e-50 | -8.615850e-47 |
| Msa1235980 | Msa1363930 | 0.802818 | 4.683294e-49 | -8.615850e-47 |
| Msa1235980 | Msa1371410 | 0.840630 | 7.747206e-58 | -8.615850e-47 |
| Msa1235980 | Msa1385480 | 0.898673 | 4.213821e-77 | -8.615850e-47 |
| Msa1235980 | Msa1387750 | 0.858671 | 7.018118e-63 | -8.615850e-47 |
| Msa1235980 | Msa1390760 | 0.891299 | 4.510104e-74 | -8.615850e-47 |
| Msa1235980 | Msa1403520 | 0.813393 | 2.619110e-51 | -8.615850e-47 |
| Msa1235980 | Msa1407550 | 0.924716 | 4.855817e-90 | -8.615850e-47 |
| Msa1235980 | Msa1413570 | 0.871125 | 8.672672e-67 | -8.615850e-47 |
| Msa1235980 | Msa1415620 | 0.837374 | 5.398189e-57 | -8.615850e-47 |
| Msa1235980 | Msa1421510 | 0.863264 | 2.817551e-64 | -8.615850e-47 |
| Msa1235980 | Msa1423050 | 0.807364 | 5.241761e-50 | -8.615850e-47 |
| Msa1235980 | Msa1425070 | 0.840895 | 6.599200e-58 | -8.615850e-47 |
| Msa1235980 | Msa1432310 | 0.867016 | 1.866147e-65 | -8.615850e-47 |
| Msa1235980 | Msa1441220 | -0.819924 | 8.994498e-53 | -8.615850e-47 |
| Msa1235980 | Msa1446410 | 0.819548 | 1.096475e-52 | -8.615850e-47 |
| Msa1235980 | Msa1450560 | 0.858442 | 8.215071e-63 | -8.615850e-47 |
| Msa1235980 | Msa1453380 | 0.820976 | 5.160360e-53 | -8.615850e-47 |
| Msa1235980 | Msa1453530 | 0.860631 | 1.805319e-63 | -8.615850e-47 |
| Msa1235980 | Msa1456160 | 0.811983 | 5.328388e-51 | -8.615850e-47 |
| Msa1235980 | Msa1462580 | 0.801936 | 7.115832e-49 | -8.615850e-47 |
| Msa1235980 | Msa1463510 | 0.802119 | 6.525399e-49 | -8.615850e-47 |
| Msa1235980 | Msa1463570 | 0.855433 | 6.328899e-62 | -8.615850e-47 |
| Msa1235980 | Msa1465700 | 0.987904 | 5.672769e-172 | -8.615850e-47 |
| Msa0371490 | Msa1235980 | 0.877077 | 8.390016e-69 | -8.615850e-47 |
| Msa0376850 | Msa1235980 | 0.839361 | 1.658888e-57 | -8.615850e-47 |
| Msa0377370 | Msa1235980 | 0.867676 | 1.147808e-65 | -8.615850e-47 |
| Msa0377520 | Msa1235980 | 0.851456 | 8.772189e-61 | -8.615850e-47 |
| Msa0378620 | Msa1235980 | -0.803222 | 3.863389e-49 | -8.615850e-47 |
| Msa0382670 | Msa1235980 | 0.879784 | 9.394328e-70 | -8.615850e-47 |
| Msa0383690 | Msa1235980 | 0.812912 | 3.338337e-51 | -8.615850e-47 |
| Msa0387290 | Msa1235980 | 0.850431 | 1.706110e-60 | -8.615850e-47 |
| Msa0388520 | Msa1235980 | 0.803861 | 2.848114e-49 | -8.615850e-47 |
| Msa0410940 | Msa1235980 | 0.820612 | 6.257106e-53 | -8.615850e-47 |
| Msa0416470 | Msa1235980 | 0.875348 | 3.308316e-68 | -8.615850e-47 |
| Msa0426090 | Msa1235980 | 0.860351 | 2.193978e-63 | -8.615850e-47 |
| Msa0426250 | Msa1235980 | 0.841480 | 4.633057e-58 | -8.615850e-47 |
| Msa0426940 | Msa1235980 | 0.812357 | 4.415161e-51 | -8.615850e-47 |
| Msa0432750 | Msa1235980 | 0.832834 | 7.541070e-56 | -8.615850e-47 |
| Msa0433010 | Msa1235980 | 0.819429 | 1.166812e-52 | -8.615850e-47 |
| Msa0433060 | Msa1235980 | 0.827389 | 1.607430e-54 | -8.615850e-47 |
| Msa0450150 | Msa1235980 | 0.803095 | 4.104763e-49 | -8.615850e-47 |
| Msa0472480 | Msa1235980 | 0.864971 | 8.279464e-65 | -8.615850e-47 |
| Msa0479980 | Msa1235980 | 0.835798 | 1.360212e-56 | -8.615850e-47 |
| Msa0481520 | Msa1235980 | 0.830334 | 3.114608e-55 | -8.615850e-47 |
| Msa0979820 | Msa1235980 | 0.824848 | 6.461316e-54 | -8.615850e-47 |
| Msa1019110 | Msa1235980 | 0.817168 | 3.791938e-52 | -8.615850e-47 |
| Msa1025220 | Msa1235980 | 0.808069 | 3.712150e-50 | -8.615850e-47 |
| Msa1047020 | Msa1235980 | 0.823276 | 1.511632e-53 | -8.615850e-47 |
| Msa1054280 | Msa1235980 | 0.809195 | 2.133635e-50 | -8.615850e-47 |
| Msa1082050 | Msa1235980 | 0.853615 | 2.126203e-61 | -8.615850e-47 |
| Msa1083370 | Msa1235980 | 0.814059 | 1.868322e-51 | -8.615850e-47 |
| Msa1085850 | Msa1235980 | 0.859466 | 4.056687e-63 | -8.615850e-47 |
| Msa0239420 | Msa1235980 | 0.880494 | 5.242065e-70 | -8.615850e-47 |
| Msa0256350 | Msa1235980 | 0.818461 | 1.937141e-52 | -8.615850e-47 |
| Msa0270160 | Msa1235980 | 0.842742 | 2.147755e-58 | -8.615850e-47 |
| Msa0274940 | Msa1235980 | 0.851132 | 1.082818e-60 | -8.615850e-47 |
| Msa0277600 | Msa1235980 | 0.887311 | 1.594694e-72 | -8.615850e-47 |
| Msa0278540 | Msa1235980 | 0.831447 | 1.661224e-55 | -8.615850e-47 |
| Msa0281330 | Msa1235980 | 0.833879 | 4.138499e-56 | -8.615850e-47 |
| Msa0281370 | Msa1235980 | 0.864955 | 8.377974e-65 | -8.615850e-47 |
| Msa0301250 | Msa1235980 | 0.907322 | 5.746066e-81 | -8.615850e-47 |
| Msa0313060 | Msa1235980 | 0.899091 | 2.792224e-77 | -8.615850e-47 |
| Msa0315430 | Msa1235980 | 0.868937 | 4.502678e-66 | -8.615850e-47 |
| Msa0315660 | Msa1235980 | 0.843586 | 1.279626e-58 | -8.615850e-47 |
| Msa0340560 | Msa1235980 | 0.871724 | 5.494933e-67 | -8.615850e-47 |
| Msa0346090 | Msa1235980 | 0.818979 | 1.477745e-52 | -8.615850e-47 |
| Msa0363320 | Msa1235980 | 0.833415 | 5.402625e-56 | -8.615850e-47 |
| Msa1115190 | Msa1235980 | 0.801648 | 8.153752e-49 | -8.615850e-47 |
| Msa1116940 | Msa1235980 | 0.885368 | 8.639038e-72 | -8.615850e-47 |
| Msa1124980 | Msa1235980 | 0.815045 | 1.130379e-51 | -8.615850e-47 |
| Msa1126690 | Msa1235980 | 0.830641 | 2.619577e-55 | -8.615850e-47 |
| Msa1130680 | Msa1235980 | 0.820022 | 8.540894e-53 | -8.615850e-47 |
| Msa1131030 | Msa1235980 | 0.828271 | 9.866538e-55 | -8.615850e-47 |
| Msa1136880 | Msa1235980 | 0.856780 | 2.553037e-62 | -8.615850e-47 |
| Msa1136980 | Msa1235980 | 0.824078 | 9.808540e-54 | -8.615850e-47 |
| Msa1144630 | Msa1235980 | 0.803817 | 2.908800e-49 | -8.615850e-47 |
| Msa1156830 | Msa1235980 | 0.807641 | 4.578075e-50 | -8.615850e-47 |
| Msa1163980 | Msa1235980 | 0.805613 | 1.226751e-49 | -8.615850e-47 |
| Msa1165210 | Msa1235980 | 0.804406 | 2.193238e-49 | -8.615850e-47 |
| Msa1167360 | Msa1235980 | 0.812668 | 3.775256e-51 | -8.615850e-47 |
| Msa1180000 | Msa1235980 | 0.853632 | 2.101535e-61 | -8.615850e-47 |
| Msa1186030 | Msa1235980 | 0.832423 | 9.534378e-56 | -8.615850e-47 |
| Msa1206240 | Msa1235980 | 0.803007 | 4.280733e-49 | -8.615850e-47 |
| Msa1213850 | Msa1235980 | 0.853519 | 2.265196e-61 | -8.615850e-47 |
| Msa1219760 | Msa1235980 | 0.835259 | 1.861857e-56 | -8.615850e-47 |
| Msa1221370 | Msa1235980 | -0.811913 | 5.519621e-51 | -8.615850e-47 |
| Msa0485220 | Msa1235980 | 0.864743 | 9.760263e-65 | -8.615850e-47 |
| Msa0488960 | Msa1235980 | 0.807513 | 4.871769e-50 | -8.615850e-47 |
| Msa0511760 | Msa1235980 | 0.896755 | 2.720643e-76 | -8.615850e-47 |
| Msa0516830 | Msa1235980 | 0.840093 | 1.070002e-57 | -8.615850e-47 |
| Msa0517480 | Msa1235980 | 0.841388 | 4.898669e-58 | -8.615850e-47 |
| Msa0521730 | Msa1235980 | 0.840812 | 6.938930e-58 | -8.615850e-47 |
| Msa0524680 | Msa1235980 | 0.826569 | 2.524554e-54 | -8.615850e-47 |
| Msa0528750 | Msa1235980 | 0.800159 | 1.642393e-48 | -8.615850e-47 |
| Msa0528820 | Msa1235980 | 0.819031 | 1.437743e-52 | -8.615850e-47 |
| Msa0547920 | Msa1235980 | 0.918616 | 1.250044e-86 | -8.615850e-47 |
| Msa0550490 | Msa1235980 | 0.826433 | 2.720256e-54 | -8.615850e-47 |
| Msa0552510 | Msa1235980 | 0.801235 | 9.908183e-49 | -8.615850e-47 |
| Msa0573550 | Msa1235980 | 0.890999 | 5.924853e-74 | -8.615850e-47 |
| Msa0574780 | Msa1235980 | 0.910348 | 2.071362e-82 | -8.615850e-47 |
| Msa0578010 | Msa1235980 | 0.852515 | 4.388645e-61 | -8.615850e-47 |
| Msa0579830 | Msa1235980 | 0.820257 | 7.548440e-53 | -8.615850e-47 |
| Msa0597240 | Msa1235980 | 0.875378 | 3.230488e-68 | -8.615850e-47 |
| Msa0844380 | Msa1235980 | 0.806166 | 9.387178e-50 | -8.615850e-47 |
| Msa0880050 | Msa1235980 | 0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0929680 | Msa1235980 | 0.871548 | 6.283233e-67 | -8.615850e-47 |
| Msa0929700 | Msa1235980 | 0.925770 | 1.168696e-90 | -8.615850e-47 |
| Msa0930100 | Msa1235980 | 0.803958 | 2.718973e-49 | -8.615850e-47 |
| Msa0930360 | Msa1235980 | 0.859685 | 3.485552e-63 | -8.615850e-47 |
| Msa0930790 | Msa1235980 | 0.857549 | 1.513182e-62 | -8.615850e-47 |
| Msa0930890 | Msa1235980 | 0.883304 | 5.026192e-71 | -8.615850e-47 |
| Msa0943180 | Msa1235980 | 0.816452 | 5.490842e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235980 | MtrunA17_Chr8g0345951 | 98.148 | 108 | 2 | 0 | 1 | 108 | 1 | 108 | 9.94e-73 | 211 |
| Msa1235980 | MtrunA17_Chr3g0127831 | 60.000 | 110 | 42 | 1 | 1 | 108 | 1 | 110 | 3.73e-29 | 101 |
| Msa1235980 | MtrunA17_Chr2g0311301 | 60.909 | 110 | 41 | 1 | 1 | 108 | 1 | 110 | 3.73e-29 | 101 |
| Msa1235980 | MtrunA17_Chr4g0013621 | 57.273 | 110 | 45 | 1 | 1 | 108 | 1 | 110 | 4.65e-28 | 98.6 |
| Msa1235980 | MtrunA17_Chr7g0276131 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 1.21e-23 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235980 | AT5G24510.1 | 57.391 | 115 | 38 | 4 | 1 | 108 | 1 | 111 | 1.10e-37 | 123 |
| Msa1235980 | AT1G01100.3 | 51.402 | 107 | 39 | 1 | 2 | 108 | 3 | 96 | 7.32e-32 | 108 |
| Msa1235980 | AT4G00810.1 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 3.06e-31 | 107 |
| Msa1235980 | AT4G00810.2 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 3.06e-31 | 107 |
| Msa1235980 | AT1G01100.4 | 53.636 | 110 | 48 | 1 | 2 | 108 | 3 | 112 | 6.67e-31 | 106 |
| Msa1235980 | AT1G01100.1 | 53.636 | 110 | 48 | 1 | 2 | 108 | 3 | 112 | 6.67e-31 | 106 |
| Msa1235980 | AT1G01100.2 | 53.636 | 110 | 48 | 1 | 2 | 108 | 3 | 112 | 6.67e-31 | 106 |
| Msa1235980 | AT5G47700.1 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 9.74e-31 | 105 |
| Msa1235980 | AT5G47700.2 | 53.153 | 111 | 48 | 1 | 2 | 108 | 3 | 113 | 9.74e-31 | 105 |
Find 42 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAAAATGGTAGGAATTT+AGG | 0.193757 | 8_2:-14386607 | None:intergenic |
| GTGGAGGCAGCAGCAGCAAC+TGG | 0.216487 | 8_2:-14387709 | None:intergenic |
| GAGATCGAAGAAGAAGAATT+AGG | 0.222732 | 8_2:-14386644 | None:intergenic |
| ACGTTAATGTTGAAGCTTAC+TGG | 0.234944 | 8_2:+14387593 | Msa1235980:CDS |
| TGGTGCTCCGGTTTCTGTTT+CGG | 0.321080 | 8_2:+14387684 | Msa1235980:CDS |
| AGATCGAAGAAGAAGAATTA+GGG | 0.332368 | 8_2:-14386643 | None:intergenic |
| GTCGTCGTCACTCTCATCCT+TGG | 0.357062 | 8_2:-14387859 | None:intergenic |
| ATCATCAAGGTTCTTCTTCT+CGG | 0.364681 | 8_2:-14387638 | None:intergenic |
| GTTCCTGTGTGCCCTTGTAT+TGG | 0.370081 | 8_2:+14388127 | Msa1235980:three_prime_UTR |
| TCTTCGATCTCATTCCTTCA+AGG | 0.385991 | 8_2:+14386656 | Msa1235980:five_prime_UTR |
| TTTCCTACGCTGCTGCAAAA+TGG | 0.386820 | 8_2:-14386619 | None:intergenic |
| AATACAAACATATACTTAGT+TGG | 0.430180 | 8_2:+14388165 | Msa1235980:three_prime_UTR |
| CGAAAAGTGGGTTACCTTGA+AGG | 0.447083 | 8_2:-14386670 | None:intergenic |
| ACTGGGGCCGAAACAGAAAC+CGG | 0.462684 | 8_2:-14387691 | None:intergenic |
| TCGTCGTCACTCTCATCCTT+GGG | 0.464875 | 8_2:-14387858 | None:intergenic |
| TGCCGCTGGAGGTGGTGCTC+CGG | 0.491299 | 8_2:+14387672 | Msa1235980:CDS |
| ATATTGAATGCCGCTGGAGG+TGG | 0.496313 | 8_2:+14387664 | Msa1235980:CDS |
| GCAAGTTTAGCGAATAAACT+TGG | 0.520693 | 8_2:-14387616 | None:intergenic |
| TGCTCCTATCGAGGAGAAGA+AGG | 0.520970 | 8_2:+14387741 | Msa1235980:CDS |
| TTATCTTTGATAATTTGAGT+TGG | 0.538348 | 8_2:+14388058 | Msa1235980:three_prime_UTR |
| TGGAGGCAGCAGCAGCAACT+GGG | 0.544694 | 8_2:-14387708 | None:intergenic |
| AGGAGCAGCAACTGCAGTGG+AGG | 0.545209 | 8_2:-14387725 | None:intergenic |
| GGATGAGAGTGACGACGACA+TGG | 0.547177 | 8_2:+14387863 | Msa1235980:CDS |
| GTTTGCAGCTTTCAACAAAG+TGG | 0.560297 | 8_2:-14387572 | None:intergenic |
| GTTAAGCAAACTCCAATACA+AGG | 0.570120 | 8_2:-14388139 | None:intergenic |
| CTACGCTGCTGCAAAATGGT+AGG | 0.580550 | 8_2:-14386615 | None:intergenic |
| GATTTGATATTGAATGCCGC+TGG | 0.580711 | 8_2:+14387658 | Msa1235980:CDS |
| AACCGGAGCACCACCTCCAG+CGG | 0.583475 | 8_2:-14387674 | None:intergenic |
| CGGCGATGTTATCATCATGA+AGG | 0.588233 | 8_2:-14386857 | None:intergenic |
| CATTCAATATCAAATCATCA+AGG | 0.592309 | 8_2:-14387651 | None:intergenic |
| TGCAGTTGCTGCTCCTATCG+AGG | 0.607768 | 8_2:+14387732 | Msa1235980:CDS |
| GGAGGCAGCAGCAGCAACTG+GGG | 0.621755 | 8_2:-14387707 | None:intergenic |
| CCTACCTTCTTCTCCTCGAT+AGG | 0.622145 | 8_2:-14387745 | None:intergenic |
| GATAGGAGCAGCAACTGCAG+TGG | 0.632714 | 8_2:-14387728 | None:intergenic |
| TGTAGTGTGAAAATGTCGAT+CGG | 0.636502 | 8_2:+14386804 | Msa1235980:intron |
| ACTCCAATACAAGGGCACAC+AGG | 0.641237 | 8_2:-14388130 | None:intergenic |
| ATTATCAAAGGATACAGTGA+CGG | 0.653291 | 8_2:-14386877 | None:intergenic |
| GATGAGAGTGACGACGACAT+GGG | 0.653294 | 8_2:+14387864 | Msa1235980:CDS |
| GTACTTACAGGAAGAACCCA+AGG | 0.654187 | 8_2:+14387842 | Msa1235980:intron |
| TTGATATTGAATGCCGCTGG+AGG | 0.659375 | 8_2:+14387661 | Msa1235980:CDS |
| GTAATGGGGTAGTTACTCAG+TGG | 0.696083 | 8_2:+14387944 | Msa1235980:three_prime_UTR |
| TTAAGCAAACTCCAATACAA+GGG | 0.712593 | 8_2:-14388138 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAACCTAATTTTTTTA+AGG | - | chr8_2:14387265-14387284 | None:intergenic | 10.0% |
| !!! | AAAAAAATTAGGTTTTTTAA+AGG | + | chr8_2:14387266-14387285 | Msa1235980:intron | 10.0% |
| !!! | TAAAATCAATTTTTATATAG+TGG | + | chr8_2:14387416-14387435 | Msa1235980:intron | 10.0% |
| !!! | AAAATCAATTTTTATATAGT+GGG | + | chr8_2:14387417-14387436 | Msa1235980:intron | 10.0% |
| !!! | TAAAAAACCTAATTTTTTTA+AGG | - | chr8_2:14387265-14387284 | None:intergenic | 10.0% |
| !!! | AAAAAAATTAGGTTTTTTAA+AGG | + | chr8_2:14387266-14387285 | Msa1235980:intron | 10.0% |
| !!! | TAAAATCAATTTTTATATAG+TGG | + | chr8_2:14387416-14387435 | Msa1235980:intron | 10.0% |
| !!! | AAAATCAATTTTTATATAGT+GGG | + | chr8_2:14387417-14387436 | Msa1235980:intron | 10.0% |
| !! | ATTACATTATCAATTATCAA+AGG | - | chr8_2:14386892-14386911 | None:intergenic | 15.0% |
| !!! | TTGAAAAAAAGAGATTTTTT+TGG | + | chr8_2:14386984-14387003 | Msa1235980:intron | 15.0% |
| !! | AAAAATTCAGTAATAATTTG+AGG | - | chr8_2:14387133-14387152 | None:intergenic | 15.0% |
| !!! | ATTATTACTGAATTTTTTAC+TGG | + | chr8_2:14387136-14387155 | Msa1235980:intron | 15.0% |
| !! | AATTAGTCCTTAAAAAAATT+AGG | + | chr8_2:14387255-14387274 | Msa1235980:intron | 15.0% |
| !!! | AAAAATTGATTTTACAACTT+TGG | - | chr8_2:14387410-14387429 | None:intergenic | 15.0% |
| !!! | ATTTTTCTAAGAATTAAAGA+AGG | + | chr8_2:14388086-14388105 | Msa1235980:three_prime_UTR | 15.0% |
| !! | ATTACATTATCAATTATCAA+AGG | - | chr8_2:14386892-14386911 | None:intergenic | 15.0% |
| !!! | TTGAAAAAAAGAGATTTTTT+TGG | + | chr8_2:14386984-14387003 | Msa1235980:intron | 15.0% |
| !! | AAAAATTCAGTAATAATTTG+AGG | - | chr8_2:14387133-14387152 | None:intergenic | 15.0% |
| !!! | ATTATTACTGAATTTTTTAC+TGG | + | chr8_2:14387136-14387155 | Msa1235980:intron | 15.0% |
| !! | AATTAGTCCTTAAAAAAATT+AGG | + | chr8_2:14387255-14387274 | Msa1235980:intron | 15.0% |
| !!! | AAAAATTGATTTTACAACTT+TGG | - | chr8_2:14387410-14387429 | None:intergenic | 15.0% |
| !!! | ATTTTTCTAAGAATTAAAGA+AGG | + | chr8_2:14388086-14388105 | Msa1235980:three_prime_UTR | 15.0% |
| !! | AAATTCAGAATATAATTCCT+AGG | + | chr8_2:14387194-14387213 | Msa1235980:intron | 20.0% |
| !!! | ACTAAATCAACAATTTTCTA+CGG | + | chr8_2:14387377-14387396 | Msa1235980:intron | 20.0% |
| !!! | TCTTATCTAATTGGTATTTT+TGG | + | chr8_2:14387817-14387836 | Msa1235980:intron | 20.0% |
| !!! | TTTGTTTTGATTGCATTATT+AGG | + | chr8_2:14387990-14388009 | Msa1235980:three_prime_UTR | 20.0% |
| !!! | TTATCTTTGATAATTTGAGT+TGG | + | chr8_2:14388058-14388077 | Msa1235980:three_prime_UTR | 20.0% |
| !! | AATACAAACATATACTTAGT+TGG | + | chr8_2:14388165-14388184 | Msa1235980:three_prime_UTR | 20.0% |
| !! | AAATTCAGAATATAATTCCT+AGG | + | chr8_2:14387194-14387213 | Msa1235980:intron | 20.0% |
| !!! | ACTAAATCAACAATTTTCTA+CGG | + | chr8_2:14387377-14387396 | Msa1235980:intron | 20.0% |
| !!! | TCTTATCTAATTGGTATTTT+TGG | + | chr8_2:14387817-14387836 | Msa1235980:intron | 20.0% |
| !!! | TTTGTTTTGATTGCATTATT+AGG | + | chr8_2:14387990-14388009 | Msa1235980:three_prime_UTR | 20.0% |
| !!! | TTATCTTTGATAATTTGAGT+TGG | + | chr8_2:14388058-14388077 | Msa1235980:three_prime_UTR | 20.0% |
| !! | AATACAAACATATACTTAGT+TGG | + | chr8_2:14388165-14388184 | Msa1235980:three_prime_UTR | 20.0% |
| ! | AGAAATAAACAACGAAAAGT+GGG | - | chr8_2:14386685-14386704 | None:intergenic | 25.0% |
| ! | TAGAAATAAACAACGAAAAG+TGG | - | chr8_2:14386686-14386705 | None:intergenic | 25.0% |
| ! | TAATGAATTTAGAAGATGCT+AGG | + | chr8_2:14386952-14386971 | Msa1235980:intron | 25.0% |
| !!! | AGATTTTTTTGGATGATACA+AGG | + | chr8_2:14386995-14387014 | Msa1235980:intron | 25.0% |
| !!! | GATTTTTTTGGATGATACAA+GGG | + | chr8_2:14386996-14387015 | Msa1235980:intron | 25.0% |
| !!! | ATTTTTTTGGATGATACAAG+GGG | + | chr8_2:14386997-14387016 | Msa1235980:intron | 25.0% |
| !!! | ATTTTTATATAGTGGGAATC+TGG | + | chr8_2:14387424-14387443 | Msa1235980:intron | 25.0% |
| !!! | TTTTTATATAGTGGGAATCT+GGG | + | chr8_2:14387425-14387444 | Msa1235980:intron | 25.0% |
| !!! | GAATTTTGTTTTGGTGAATA+AGG | + | chr8_2:14387452-14387471 | Msa1235980:intron | 25.0% |
| ! | CATTCAATATCAAATCATCA+AGG | - | chr8_2:14387654-14387673 | None:intergenic | 25.0% |
| !! | ATCTATTCTGATTTTTGTAC+TGG | + | chr8_2:14387922-14387941 | Msa1235980:three_prime_UTR | 25.0% |
| !!! | TGCTTTTGACTTAAGAATAT+GGG | + | chr8_2:14388027-14388046 | Msa1235980:three_prime_UTR | 25.0% |
| ! | AGAAATAAACAACGAAAAGT+GGG | - | chr8_2:14386685-14386704 | None:intergenic | 25.0% |
| ! | TAGAAATAAACAACGAAAAG+TGG | - | chr8_2:14386686-14386705 | None:intergenic | 25.0% |
| ! | TAATGAATTTAGAAGATGCT+AGG | + | chr8_2:14386952-14386971 | Msa1235980:intron | 25.0% |
| !!! | AGATTTTTTTGGATGATACA+AGG | + | chr8_2:14386995-14387014 | Msa1235980:intron | 25.0% |
| !!! | GATTTTTTTGGATGATACAA+GGG | + | chr8_2:14386996-14387015 | Msa1235980:intron | 25.0% |
| !!! | ATTTTTTTGGATGATACAAG+GGG | + | chr8_2:14386997-14387016 | Msa1235980:intron | 25.0% |
| !!! | ATTTTTATATAGTGGGAATC+TGG | + | chr8_2:14387424-14387443 | Msa1235980:intron | 25.0% |
| !!! | TTTTTATATAGTGGGAATCT+GGG | + | chr8_2:14387425-14387444 | Msa1235980:intron | 25.0% |
| !!! | GAATTTTGTTTTGGTGAATA+AGG | + | chr8_2:14387452-14387471 | Msa1235980:intron | 25.0% |
| ! | CATTCAATATCAAATCATCA+AGG | - | chr8_2:14387654-14387673 | None:intergenic | 25.0% |
| !! | ATCTATTCTGATTTTTGTAC+TGG | + | chr8_2:14387922-14387941 | Msa1235980:three_prime_UTR | 25.0% |
| !!! | TGCTTTTGACTTAAGAATAT+GGG | + | chr8_2:14388027-14388046 | Msa1235980:three_prime_UTR | 25.0% |
| AGATCGAAGAAGAAGAATTA+GGG | - | chr8_2:14386646-14386665 | None:intergenic | 30.0% | |
| ATTATCAAAGGATACAGTGA+CGG | - | chr8_2:14386880-14386899 | None:intergenic | 30.0% | |
| ATTTAGAAGATGCTAGGAAT+TGG | + | chr8_2:14386958-14386977 | Msa1235980:intron | 30.0% | |
| TTTAGAAGATGCTAGGAATT+GGG | + | chr8_2:14386959-14386978 | Msa1235980:intron | 30.0% | |
| AATGACAATTAACAACTCCT+AGG | - | chr8_2:14387214-14387233 | None:intergenic | 30.0% | |
| TAAGTGCTAGTTAAAGTTCT+TGG | + | chr8_2:14387304-14387323 | Msa1235980:intron | 30.0% | |
| TAAAGTTCTTGGATAGAGTT+AGG | + | chr8_2:14387315-14387334 | Msa1235980:intron | 30.0% | |
| ! | ATCAACAATTTTCTACGGTA+AGG | + | chr8_2:14387382-14387401 | Msa1235980:intron | 30.0% |
| ! | TCAACAATTTTCTACGGTAA+GGG | + | chr8_2:14387383-14387402 | Msa1235980:intron | 30.0% |
| !!! | CTGGGTTTTGAATTTTGTTT+TGG | + | chr8_2:14387443-14387462 | Msa1235980:intron | 30.0% |
| !!! | AGATAGCGTGTTTTAAAGAT+TGG | + | chr8_2:14387511-14387530 | Msa1235980:intron | 30.0% |
| TCCTTAAGTCATTGTTGATA+GGG | + | chr8_2:14387538-14387557 | Msa1235980:intron | 30.0% | |
| TGTTGGTCATCTTATCTAAT+TGG | + | chr8_2:14387808-14387827 | Msa1235980:intron | 30.0% | |
| !!! | GTATTTTTGGTTGTACTTAC+AGG | + | chr8_2:14387830-14387849 | Msa1235980:intron | 30.0% |
| !! | TCTGATTTTTGTACTGGTAA+TGG | + | chr8_2:14387928-14387947 | Msa1235980:three_prime_UTR | 30.0% |
| !! | CTGATTTTTGTACTGGTAAT+GGG | + | chr8_2:14387929-14387948 | Msa1235980:three_prime_UTR | 30.0% |
| !! | TGATTTTTGTACTGGTAATG+GGG | + | chr8_2:14387930-14387949 | Msa1235980:three_prime_UTR | 30.0% |
| !!! | TCAGTGGAATTCCTTTTTTT+GGG | + | chr8_2:14387960-14387979 | Msa1235980:three_prime_UTR | 30.0% |
| CAAAATTGAGTCCCAAAAAA+AGG | - | chr8_2:14387974-14387993 | None:intergenic | 30.0% | |
| !!! | GTGCTTTTGACTTAAGAATA+TGG | + | chr8_2:14388026-14388045 | Msa1235980:three_prime_UTR | 30.0% |
| TTAAGCAAACTCCAATACAA+GGG | - | chr8_2:14388141-14388160 | None:intergenic | 30.0% | |
| AGATCGAAGAAGAAGAATTA+GGG | - | chr8_2:14386646-14386665 | None:intergenic | 30.0% | |
| ATTATCAAAGGATACAGTGA+CGG | - | chr8_2:14386880-14386899 | None:intergenic | 30.0% | |
| ATTTAGAAGATGCTAGGAAT+TGG | + | chr8_2:14386958-14386977 | Msa1235980:intron | 30.0% | |
| TTTAGAAGATGCTAGGAATT+GGG | + | chr8_2:14386959-14386978 | Msa1235980:intron | 30.0% | |
| AATGACAATTAACAACTCCT+AGG | - | chr8_2:14387214-14387233 | None:intergenic | 30.0% | |
| TAAGTGCTAGTTAAAGTTCT+TGG | + | chr8_2:14387304-14387323 | Msa1235980:intron | 30.0% | |
| TAAAGTTCTTGGATAGAGTT+AGG | + | chr8_2:14387315-14387334 | Msa1235980:intron | 30.0% | |
| ! | ATCAACAATTTTCTACGGTA+AGG | + | chr8_2:14387382-14387401 | Msa1235980:intron | 30.0% |
| ! | TCAACAATTTTCTACGGTAA+GGG | + | chr8_2:14387383-14387402 | Msa1235980:intron | 30.0% |
| !!! | CTGGGTTTTGAATTTTGTTT+TGG | + | chr8_2:14387443-14387462 | Msa1235980:intron | 30.0% |
| !!! | AGATAGCGTGTTTTAAAGAT+TGG | + | chr8_2:14387511-14387530 | Msa1235980:intron | 30.0% |
| TCCTTAAGTCATTGTTGATA+GGG | + | chr8_2:14387538-14387557 | Msa1235980:intron | 30.0% | |
| TGTTGGTCATCTTATCTAAT+TGG | + | chr8_2:14387808-14387827 | Msa1235980:intron | 30.0% | |
| !!! | GTATTTTTGGTTGTACTTAC+AGG | + | chr8_2:14387830-14387849 | Msa1235980:intron | 30.0% |
| !! | TCTGATTTTTGTACTGGTAA+TGG | + | chr8_2:14387928-14387947 | Msa1235980:three_prime_UTR | 30.0% |
| !! | CTGATTTTTGTACTGGTAAT+GGG | + | chr8_2:14387929-14387948 | Msa1235980:three_prime_UTR | 30.0% |
| !! | TGATTTTTGTACTGGTAATG+GGG | + | chr8_2:14387930-14387949 | Msa1235980:three_prime_UTR | 30.0% |
| !!! | TCAGTGGAATTCCTTTTTTT+GGG | + | chr8_2:14387960-14387979 | Msa1235980:three_prime_UTR | 30.0% |
| CAAAATTGAGTCCCAAAAAA+AGG | - | chr8_2:14387974-14387993 | None:intergenic | 30.0% | |
| !!! | GTGCTTTTGACTTAAGAATA+TGG | + | chr8_2:14388026-14388045 | Msa1235980:three_prime_UTR | 30.0% |
| TTAAGCAAACTCCAATACAA+GGG | - | chr8_2:14388141-14388160 | None:intergenic | 30.0% | |
| CTGCAAAATGGTAGGAATTT+AGG | - | chr8_2:14386610-14386629 | None:intergenic | 35.0% | |
| GAGATCGAAGAAGAAGAATT+AGG | - | chr8_2:14386647-14386666 | None:intergenic | 35.0% | |
| TGTAGTGTGAAAATGTCGAT+CGG | + | chr8_2:14386804-14386823 | Msa1235980:intron | 35.0% | |
| TTTGGTGAATAAGGAAAGTG+TGG | + | chr8_2:14387461-14387480 | Msa1235980:intron | 35.0% | |
| ! | AATAAGGAAAGTGTGGTGTA+AGG | + | chr8_2:14387468-14387487 | Msa1235980:intron | 35.0% |
| ! | ATAAGGAAAGTGTGGTGTAA+GGG | + | chr8_2:14387469-14387488 | Msa1235980:intron | 35.0% |
| CTCCTTAAGTCATTGTTGAT+AGG | + | chr8_2:14387537-14387556 | Msa1235980:intron | 35.0% | |
| ACCCTATCAACAATGACTTA+AGG | - | chr8_2:14387542-14387561 | None:intergenic | 35.0% | |
| ACGTTAATGTTGAAGCTTAC+TGG | + | chr8_2:14387593-14387612 | Msa1235980:CDS | 35.0% | |
| GCAAGTTTAGCGAATAAACT+TGG | - | chr8_2:14387619-14387638 | None:intergenic | 35.0% | |
| ATCATCAAGGTTCTTCTTCT+CGG | - | chr8_2:14387641-14387660 | None:intergenic | 35.0% | |
| GAACTTTGTCTTCTGTTTGT+TGG | + | chr8_2:14387791-14387810 | Msa1235980:intron | 35.0% | |
| !!! | CTCAGTGGAATTCCTTTTTT+TGG | + | chr8_2:14387959-14387978 | Msa1235980:three_prime_UTR | 35.0% |
| GTTAAGCAAACTCCAATACA+AGG | - | chr8_2:14388142-14388161 | None:intergenic | 35.0% | |
| CTGCAAAATGGTAGGAATTT+AGG | - | chr8_2:14386610-14386629 | None:intergenic | 35.0% | |
| GAGATCGAAGAAGAAGAATT+AGG | - | chr8_2:14386647-14386666 | None:intergenic | 35.0% | |
| TGTAGTGTGAAAATGTCGAT+CGG | + | chr8_2:14386804-14386823 | Msa1235980:intron | 35.0% | |
| TTTGGTGAATAAGGAAAGTG+TGG | + | chr8_2:14387461-14387480 | Msa1235980:intron | 35.0% | |
| ! | AATAAGGAAAGTGTGGTGTA+AGG | + | chr8_2:14387468-14387487 | Msa1235980:intron | 35.0% |
| ! | ATAAGGAAAGTGTGGTGTAA+GGG | + | chr8_2:14387469-14387488 | Msa1235980:intron | 35.0% |
| CTCCTTAAGTCATTGTTGAT+AGG | + | chr8_2:14387537-14387556 | Msa1235980:intron | 35.0% | |
| ACCCTATCAACAATGACTTA+AGG | - | chr8_2:14387542-14387561 | None:intergenic | 35.0% | |
| ACGTTAATGTTGAAGCTTAC+TGG | + | chr8_2:14387593-14387612 | Msa1235980:CDS | 35.0% | |
| GCAAGTTTAGCGAATAAACT+TGG | - | chr8_2:14387619-14387638 | None:intergenic | 35.0% | |
| ATCATCAAGGTTCTTCTTCT+CGG | - | chr8_2:14387641-14387660 | None:intergenic | 35.0% | |
| GAACTTTGTCTTCTGTTTGT+TGG | + | chr8_2:14387791-14387810 | Msa1235980:intron | 35.0% | |
| !!! | CTCAGTGGAATTCCTTTTTT+TGG | + | chr8_2:14387959-14387978 | Msa1235980:three_prime_UTR | 35.0% |
| GTTAAGCAAACTCCAATACA+AGG | - | chr8_2:14388142-14388161 | None:intergenic | 35.0% | |
| TCTTCGATCTCATTCCTTCA+AGG | + | chr8_2:14386656-14386675 | Msa1235980:five_prime_UTR | 40.0% | |
| GATGATACAAGGGGCTATAT+AGG | + | chr8_2:14387006-14387025 | Msa1235980:intron | 40.0% | |
| !!! | TCGATCAGAAGTGTCGTTTT+AGG | - | chr8_2:14387040-14387059 | None:intergenic | 40.0% |
| GTTTGCAGCTTTCAACAAAG+TGG | - | chr8_2:14387575-14387594 | None:intergenic | 40.0% | |
| GATTTGATATTGAATGCCGC+TGG | + | chr8_2:14387658-14387677 | Msa1235980:CDS | 40.0% | |
| ! | AGGAGAAGAAGGTAGGTTTT+TGG | + | chr8_2:14387752-14387771 | Msa1235980:intron | 40.0% |
| TCTTCGATCTCATTCCTTCA+AGG | + | chr8_2:14386656-14386675 | Msa1235980:five_prime_UTR | 40.0% | |
| GATGATACAAGGGGCTATAT+AGG | + | chr8_2:14387006-14387025 | Msa1235980:intron | 40.0% | |
| !!! | TCGATCAGAAGTGTCGTTTT+AGG | - | chr8_2:14387040-14387059 | None:intergenic | 40.0% |
| GTTTGCAGCTTTCAACAAAG+TGG | - | chr8_2:14387575-14387594 | None:intergenic | 40.0% | |
| GATTTGATATTGAATGCCGC+TGG | + | chr8_2:14387658-14387677 | Msa1235980:CDS | 40.0% | |
| ! | AGGAGAAGAAGGTAGGTTTT+TGG | + | chr8_2:14387752-14387771 | Msa1235980:intron | 40.0% |
| TTTCCTACGCTGCTGCAAAA+TGG | - | chr8_2:14386622-14386641 | None:intergenic | 45.0% | |
| !! | CGAAAAGTGGGTTACCTTGA+AGG | - | chr8_2:14386673-14386692 | None:intergenic | 45.0% |
| CGGCGATGTTATCATCATGA+AGG | - | chr8_2:14386860-14386879 | None:intergenic | 45.0% | |
| CTTCTGATCGAAGTTGTGTC+TGG | + | chr8_2:14387049-14387068 | Msa1235980:intron | 45.0% | |
| TTGATATTGAATGCCGCTGG+AGG | + | chr8_2:14387661-14387680 | Msa1235980:CDS | 45.0% | |
| GTACTTACAGGAAGAACCCA+AGG | + | chr8_2:14387842-14387861 | Msa1235980:intron | 45.0% | |
| ! | GTAATGGGGTAGTTACTCAG+TGG | + | chr8_2:14387944-14387963 | Msa1235980:three_prime_UTR | 45.0% |
| TTTCCTACGCTGCTGCAAAA+TGG | - | chr8_2:14386622-14386641 | None:intergenic | 45.0% | |
| !! | CGAAAAGTGGGTTACCTTGA+AGG | - | chr8_2:14386673-14386692 | None:intergenic | 45.0% |
| CGGCGATGTTATCATCATGA+AGG | - | chr8_2:14386860-14386879 | None:intergenic | 45.0% | |
| CTTCTGATCGAAGTTGTGTC+TGG | + | chr8_2:14387049-14387068 | Msa1235980:intron | 45.0% | |
| TTGATATTGAATGCCGCTGG+AGG | + | chr8_2:14387661-14387680 | Msa1235980:CDS | 45.0% | |
| GTACTTACAGGAAGAACCCA+AGG | + | chr8_2:14387842-14387861 | Msa1235980:intron | 45.0% | |
| ! | GTAATGGGGTAGTTACTCAG+TGG | + | chr8_2:14387944-14387963 | Msa1235980:three_prime_UTR | 45.0% |
| !!! | TTTTTTTATTTTCTTATTTT+AGG | + | chr8_2:14387354-14387373 | Msa1235980:intron | 5.0% |
| !!! | TTTTTTTATTTTCTTATTTT+AGG | + | chr8_2:14387354-14387373 | Msa1235980:intron | 5.0% |
| CTACGCTGCTGCAAAATGGT+AGG | - | chr8_2:14386618-14386637 | None:intergenic | 50.0% | |
| ! | CTACCATTTTGCAGCAGCGT+AGG | + | chr8_2:14386616-14386635 | Msa1235980:five_prime_UTR | 50.0% |
| TGGTGTGTGTCAGTGCTTCA+TGG | + | chr8_2:14387156-14387175 | Msa1235980:intron | 50.0% | |
| ATATTGAATGCCGCTGGAGG+TGG | + | chr8_2:14387664-14387683 | Msa1235980:CDS | 50.0% | |
| TGGTGCTCCGGTTTCTGTTT+CGG | + | chr8_2:14387684-14387703 | Msa1235980:CDS | 50.0% | |
| TGCTCCTATCGAGGAGAAGA+AGG | + | chr8_2:14387741-14387760 | Msa1235980:CDS | 50.0% | |
| CCTACCTTCTTCTCCTCGAT+AGG | - | chr8_2:14387748-14387767 | None:intergenic | 50.0% | |
| CCTATCGAGGAGAAGAAGGT+AGG | + | chr8_2:14387745-14387764 | Msa1235980:intron | 50.0% | |
| TCGTCGTCACTCTCATCCTT+GGG | - | chr8_2:14387861-14387880 | None:intergenic | 50.0% | |
| GATGAGAGTGACGACGACAT+GGG | + | chr8_2:14387864-14387883 | Msa1235980:CDS | 50.0% | |
| GTTCCTGTGTGCCCTTGTAT+TGG | + | chr8_2:14388127-14388146 | Msa1235980:three_prime_UTR | 50.0% | |
| ! | ACTCCAATACAAGGGCACAC+AGG | - | chr8_2:14388133-14388152 | None:intergenic | 50.0% |
| CTACGCTGCTGCAAAATGGT+AGG | - | chr8_2:14386618-14386637 | None:intergenic | 50.0% | |
| ! | CTACCATTTTGCAGCAGCGT+AGG | + | chr8_2:14386616-14386635 | Msa1235980:five_prime_UTR | 50.0% |
| TGGTGTGTGTCAGTGCTTCA+TGG | + | chr8_2:14387156-14387175 | Msa1235980:intron | 50.0% | |
| ATATTGAATGCCGCTGGAGG+TGG | + | chr8_2:14387664-14387683 | Msa1235980:CDS | 50.0% | |
| TGGTGCTCCGGTTTCTGTTT+CGG | + | chr8_2:14387684-14387703 | Msa1235980:CDS | 50.0% | |
| TGCTCCTATCGAGGAGAAGA+AGG | + | chr8_2:14387741-14387760 | Msa1235980:CDS | 50.0% | |
| CCTACCTTCTTCTCCTCGAT+AGG | - | chr8_2:14387748-14387767 | None:intergenic | 50.0% | |
| CCTATCGAGGAGAAGAAGGT+AGG | + | chr8_2:14387745-14387764 | Msa1235980:intron | 50.0% | |
| TCGTCGTCACTCTCATCCTT+GGG | - | chr8_2:14387861-14387880 | None:intergenic | 50.0% | |
| GATGAGAGTGACGACGACAT+GGG | + | chr8_2:14387864-14387883 | Msa1235980:CDS | 50.0% | |
| GTTCCTGTGTGCCCTTGTAT+TGG | + | chr8_2:14388127-14388146 | Msa1235980:three_prime_UTR | 50.0% | |
| ! | ACTCCAATACAAGGGCACAC+AGG | - | chr8_2:14388133-14388152 | None:intergenic | 50.0% |
| ACTGGGGCCGAAACAGAAAC+CGG | - | chr8_2:14387694-14387713 | None:intergenic | 55.0% | |
| GATAGGAGCAGCAACTGCAG+TGG | - | chr8_2:14387731-14387750 | None:intergenic | 55.0% | |
| TGCAGTTGCTGCTCCTATCG+AGG | + | chr8_2:14387732-14387751 | Msa1235980:CDS | 55.0% | |
| GTCGTCGTCACTCTCATCCT+TGG | - | chr8_2:14387862-14387881 | None:intergenic | 55.0% | |
| GGATGAGAGTGACGACGACA+TGG | + | chr8_2:14387863-14387882 | Msa1235980:CDS | 55.0% | |
| ACTGGGGCCGAAACAGAAAC+CGG | - | chr8_2:14387694-14387713 | None:intergenic | 55.0% | |
| GATAGGAGCAGCAACTGCAG+TGG | - | chr8_2:14387731-14387750 | None:intergenic | 55.0% | |
| TGCAGTTGCTGCTCCTATCG+AGG | + | chr8_2:14387732-14387751 | Msa1235980:CDS | 55.0% | |
| GTCGTCGTCACTCTCATCCT+TGG | - | chr8_2:14387862-14387881 | None:intergenic | 55.0% | |
| GGATGAGAGTGACGACGACA+TGG | + | chr8_2:14387863-14387882 | Msa1235980:CDS | 55.0% | |
| TGGAGGCAGCAGCAGCAACT+GGG | - | chr8_2:14387711-14387730 | None:intergenic | 60.0% | |
| AGGAGCAGCAACTGCAGTGG+AGG | - | chr8_2:14387728-14387747 | None:intergenic | 60.0% | |
| TGGAGGCAGCAGCAGCAACT+GGG | - | chr8_2:14387711-14387730 | None:intergenic | 60.0% | |
| AGGAGCAGCAACTGCAGTGG+AGG | - | chr8_2:14387728-14387747 | None:intergenic | 60.0% | |
| ! | AACCGGAGCACCACCTCCAG+CGG | - | chr8_2:14387677-14387696 | None:intergenic | 65.0% |
| GGAGGCAGCAGCAGCAACTG+GGG | - | chr8_2:14387710-14387729 | None:intergenic | 65.0% | |
| GTGGAGGCAGCAGCAGCAAC+TGG | - | chr8_2:14387712-14387731 | None:intergenic | 65.0% | |
| ! | AACCGGAGCACCACCTCCAG+CGG | - | chr8_2:14387677-14387696 | None:intergenic | 65.0% |
| GGAGGCAGCAGCAGCAACTG+GGG | - | chr8_2:14387710-14387729 | None:intergenic | 65.0% | |
| GTGGAGGCAGCAGCAGCAAC+TGG | - | chr8_2:14387712-14387731 | None:intergenic | 65.0% | |
| TGCCGCTGGAGGTGGTGCTC+CGG | + | chr8_2:14387672-14387691 | Msa1235980:CDS | 70.0% | |
| TGCCGCTGGAGGTGGTGCTC+CGG | + | chr8_2:14387672-14387691 | Msa1235980:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 14386602 | 14388195 | 14386602 | ID=Msa1235980;Name=Msa1235980 |
| chr8_2 | mRNA | 14386602 | 14388195 | 14386602 | ID=Msa1235980-mRNA-1;Parent=Msa1235980;Name=Msa1235980-mRNA-1;_AED=0.16;_eAED=0.16;_QI=83|1|1|1|0.66|0.5|4|290|108 |
| chr8_2 | exon | 14386602 | 14386677 | 14386602 | ID=Msa1235980-mRNA-1:exon:5528;Parent=Msa1235980-mRNA-1 |
| chr8_2 | exon | 14386809 | 14386884 | 14386809 | ID=Msa1235980-mRNA-1:exon:5529;Parent=Msa1235980-mRNA-1 |
| chr8_2 | exon | 14387559 | 14387762 | 14387559 | ID=Msa1235980-mRNA-1:exon:5530;Parent=Msa1235980-mRNA-1 |
| chr8_2 | exon | 14387852 | 14388195 | 14387852 | ID=Msa1235980-mRNA-1:exon:5531;Parent=Msa1235980-mRNA-1 |
| chr8_2 | five_prime_UTR | 14386602 | 14386677 | 14386602 | ID=Msa1235980-mRNA-1:five_prime_utr;Parent=Msa1235980-mRNA-1 |
| chr8_2 | five_prime_UTR | 14386809 | 14386815 | 14386809 | ID=Msa1235980-mRNA-1:five_prime_utr;Parent=Msa1235980-mRNA-1 |
| chr8_2 | CDS | 14386816 | 14386884 | 14386816 | ID=Msa1235980-mRNA-1:cds;Parent=Msa1235980-mRNA-1 |
| chr8_2 | CDS | 14387559 | 14387762 | 14387559 | ID=Msa1235980-mRNA-1:cds;Parent=Msa1235980-mRNA-1 |
| chr8_2 | CDS | 14387852 | 14387905 | 14387852 | ID=Msa1235980-mRNA-1:cds;Parent=Msa1235980-mRNA-1 |
| chr8_2 | three_prime_UTR | 14387906 | 14388195 | 14387906 | ID=Msa1235980-mRNA-1:three_prime_utr;Parent=Msa1235980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
