AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0411710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411710 MtrunA17_Chr3g0103121 98.339 1385 21 1 1 1385 1 1383 0.0 2803
Msa0411710 MtrunA17_Chr2g0290921 53.595 1377 531 26 52 1385 67 1378 0.0 1303
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0411710 AT3G13300.2 58.352 1311 478 20 93 1385 49 1309 0.0 1430
Msa0411710 AT3G13300.1 58.352 1311 478 20 93 1385 84 1344 0.0 1429
Msa0411710 AT3G13290.1 55.067 1411 534 30 2 1385 3 1340 0.0 1410
Msa0411710 AT3G13300.3 56.095 1173 450 19 93 1247 84 1209 0.0 1203

Find 408 sgRNAs with CRISPR-Local

Find 688 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGAAGCTTTCTGATTTC+AGG 0.111544 3_2:+54100705 Msa0411710:CDS
AATGTTCAGCCATGCCTTTC+TGG 0.114471 3_2:-54102853 None:intergenic
TAGGGTTAGGGTTAGGGTTT+GGG 0.192627 3_2:-54096788 None:intergenic
TGCTCTCAGGCTTCTGATCT+TGG 0.193404 3_2:+54101148 Msa0411710:CDS
ACTTGCTTGCATCATTGTTT+TGG 0.210534 3_2:-54100501 None:intergenic
ATCGGATCCTAATCCGGTTT+TGG 0.234731 3_2:+54097349 Msa0411710:CDS
AACTGATGATGCTGAATTAA+TGG 0.236650 3_2:-54103866 None:intergenic
GTGCAGCAACGCCTTGAATC+TGG 0.237439 3_2:+54102884 Msa0411710:CDS
AATCAATCTGTGATTAGATT+TGG 0.239107 3_2:-54096657 None:intergenic
TTGCTCAAACATGGCTTTGC+AGG 0.239587 3_2:-54102816 None:intergenic
AGCTTGTCAAGAGGACATTT+TGG 0.240443 3_2:-54098855 None:intergenic
ATCAATCTGTGATTAGATTT+GGG 0.257493 3_2:-54096656 None:intergenic
AATAAGTCTTATATTTGTTA+TGG 0.259437 3_2:+54097389 Msa0411710:CDS
ATGCGAGTTGATTCGGGATT+AGG 0.274855 3_2:-54100191 None:intergenic
CTCAATTTAGACACTGTATC+TGG 0.281616 3_2:+54105076 Msa0411710:three_prime_UTR
TAGGGTTAGGGTTAGGGTTA+GGG 0.283522 3_2:-54096794 None:intergenic
TCTTTGTATCGCTATTAAAT+TGG 0.284531 3_2:-54100826 None:intergenic
TTAGGGTTAGGGTTAGGGTT+AGG 0.284570 3_2:-54096795 None:intergenic
CTTCGTTGGCAATGACTCTA+AGG 0.288649 3_2:+54102912 Msa0411710:CDS
TTAACAACGGTTGCAACTAT+TGG 0.288908 3_2:+54105171 Msa0411710:three_prime_UTR
GAAATGTTAGGGTTAGGGTT+AGG 0.294032 3_2:-54096801 None:intergenic
TCAGTATGACCTGAGCTTAA+AGG 0.295799 3_2:-54100554 None:intergenic
AAGGAGCGGAGGAAGGGAAT+TGG 0.295926 3_2:-54096827 None:intergenic
GGTTGAAACAGGGGAATATC+AGG 0.299864 3_2:+54097411 Msa0411710:CDS
GACCGTTTCCAACATGTTAC+AGG 0.301042 3_2:+54102213 Msa0411710:CDS
TACTATCGCGGAATCCTTCC+AGG 0.304972 3_2:+54102365 Msa0411710:CDS
TATTTGTTATGGGTTGAAAC+AGG 0.311245 3_2:+54097400 Msa0411710:CDS
TGGGAAGAAATGTTAGGGTT+AGG 0.314580 3_2:-54096807 None:intergenic
TTGAACAGCAATAACAATAT+TGG 0.317646 3_2:-54098582 None:intergenic
CTGTCATCCACGAGAGCTTT+CGG 0.320363 3_2:-54104727 None:intergenic
GACCACTGTCGTTTCAAAAC+TGG 0.320503 3_2:-54102777 None:intergenic
TTAGGGTTAGGGTTAGGGTT+TGG 0.320971 3_2:-54096789 None:intergenic
GTTGCGCCGATTACGAAATA+TGG 0.323077 3_2:+54097326 Msa0411710:CDS
TGAAATTCCATTTGGTTCAT+TGG 0.334502 3_2:-54101467 None:intergenic
CCTGAAATCAGAAAGCTTCC+TGG 0.334833 3_2:-54100705 None:intergenic
TCAGCAGTATGCTTTGGATT+TGG 0.339251 3_2:+54100331 Msa0411710:CDS
GGCTATTCAGCAGTATGCTT+TGG 0.339687 3_2:+54100325 Msa0411710:CDS
TGTCATCCACGAGAGCTTTC+GGG 0.341908 3_2:-54104726 None:intergenic
GAAATTGAACGGTGTTGAAT+TGG 0.344229 3_2:-54096990 None:intergenic
ATTGATGGGGTTCAACTTGT+AGG 0.344290 3_2:+54098879 Msa0411710:CDS
ATAATCCATGCGAGTTGATT+CGG 0.346072 3_2:-54100198 None:intergenic
TGGAGAAGGTGGTGGTTGAT+TGG 0.346338 3_2:-54096733 None:intergenic
AGGGTTAGGGTTAGGGTTTG+GGG 0.347828 3_2:-54096787 None:intergenic
TGTCGACCCAAAACCGGATT+AGG 0.349912 3_2:-54097356 None:intergenic
GTACAAAGTTGTGAGTTTCA+TGG 0.351634 3_2:+54104991 Msa0411710:three_prime_UTR
GGAGAAGGTGGTGGTTGATT+GGG 0.353739 3_2:-54096732 None:intergenic
AAATGTTAGGGTTAGGGTTA+GGG 0.355061 3_2:-54096800 None:intergenic
CTGCCGCGGCAGCGTTGATT+AGG 0.358098 3_2:+54097201 Msa0411710:CDS
GTTGTTGTTGTTGGATTGGA+GGG 0.358457 3_2:-54097112 None:intergenic
TGTATCTTGGTTATGCTCTC+AGG 0.367034 3_2:+54104241 Msa0411710:CDS
ATAAGTCTTATATTTGTTAT+GGG 0.368854 3_2:+54097390 Msa0411710:CDS
GCGTCAACTTGTTGACGATT+AGG 0.370461 3_2:+54105120 Msa0411710:three_prime_UTR
GTTGTTGAGGTGGTTGAAGA+GGG 0.370725 3_2:-54097025 None:intergenic
AGGAGCGGAGGAAGGGAATT+GGG 0.371262 3_2:-54096826 None:intergenic
TTGAACTCTTCTGATACAAT+TGG 0.371554 3_2:+54104962 Msa0411710:three_prime_UTR
TGCTATATATGCTGTGCATT+TGG 0.375956 3_2:+54100160 Msa0411710:CDS
TTCCATGTTTCAGTATTGCT+TGG 0.376457 3_2:-54100017 None:intergenic
GCGGTGGTGGTTGTTGTTGT+TGG 0.377045 3_2:-54097121 None:intergenic
CACCTATCGCACCACACTCT+CGG 0.378749 3_2:-54101183 None:intergenic
TCATGGGGAACATATTGTTC+AGG 0.379850 3_2:+54100283 Msa0411710:CDS
CAACGCTGCCGCGGCAGCAT+TGG 0.385687 3_2:-54097195 None:intergenic
CCTCTTGACAAGCTCATTGA+TGG 0.386557 3_2:+54098864 Msa0411710:CDS
GGGAAGAAATGTTAGGGTTA+GGG 0.388457 3_2:-54096806 None:intergenic
TGTTGACGATTAGGATAAAC+TGG 0.389090 3_2:+54105129 Msa0411710:three_prime_UTR
TAATCCATGCGAGTTGATTC+GGG 0.389462 3_2:-54100197 None:intergenic
CCTTGTAGGGACCACAAAAT+CGG 0.389832 3_2:+54099949 Msa0411710:intron
AAATGTAACAGATAAAGATA+TGG 0.389845 3_2:+54099545 Msa0411710:intron
TCCATGTTTCAGTATTGCTT+GGG 0.392154 3_2:-54100016 None:intergenic
TTGAACATCCTCAAATTTGC+TGG 0.393957 3_2:+54098624 Msa0411710:CDS
ATGGAAATGCACTCAGACTT+TGG 0.394659 3_2:+54100034 Msa0411710:CDS
CTGCTGATTTGTCTAGAAAT+AGG 0.395185 3_2:-54100581 None:intergenic
CTGATAAACTTGCTCAAAGA+TGG 0.400069 3_2:-54104804 None:intergenic
CCAATCAAATGCCTTCCTTT+CGG 0.401932 3_2:-54097242 None:intergenic
TTCAGCTAAGCCGTCTCTTA+AGG 0.402458 3_2:+54100067 Msa0411710:CDS
TATGCTGTGCATTTGGAATA+TGG 0.404664 3_2:+54100167 Msa0411710:CDS
CAGTATGACCTGAGCTTAAA+GGG 0.405764 3_2:-54100553 None:intergenic
GGTGGTTGTTGTTGTTGGAT+TGG 0.406074 3_2:-54097116 None:intergenic
CACCTCCTCCTTTGAGCCCA+AGG 0.408906 3_2:+54100678 Msa0411710:CDS
CAATCACAGCCCATCTCCTC+TGG 0.409449 3_2:+54097146 Msa0411710:CDS
GGGAATTGGGAAGAAATGTT+AGG 0.410898 3_2:-54096813 None:intergenic
TCAATCAATCAAATTCAATC+TGG 0.411048 3_2:+54096694 Msa0411710:five_prime_UTR
TCCGATCCATATTTCGTAAT+CGG 0.411817 3_2:-54097332 None:intergenic
GCTTTCACTTCTGCAGCAGC+TGG 0.416373 3_2:+54104679 Msa0411710:CDS
AAGCACTACACCTTGGCTTA+AGG 0.417960 3_2:-54104660 None:intergenic
GGATTTGAAGGAGGTGGGAT+TGG 0.418453 3_2:-54097053 None:intergenic
TCACCTGCATCTAATACAAA+AGG 0.419217 3_2:+54101364 Msa0411710:CDS
GGCTGTGATTGTGGCGGTGG+TGG 0.420287 3_2:-54097134 None:intergenic
CTAACTTGAGTGATCATGTT+GGG 0.420797 3_2:+54100738 Msa0411710:CDS
GGGAGGTTTGAAATTCCATT+TGG 0.421005 3_2:-54101475 None:intergenic
CTCCTCTGGCGCTGTTAATC+CGG 0.421656 3_2:+54097160 Msa0411710:CDS
TTGTGTATGATGTGGATGTT+AGG 0.421691 3_2:+54097273 Msa0411710:CDS
TGCTGAAGATGTTCATCTCC+TGG 0.422189 3_2:+54098390 Msa0411710:CDS
TCTTGCATTGCCGCAATTTG+AGG 0.422466 3_2:-54101517 None:intergenic
CAGTTACAAAAGAGGGTAGA+AGG 0.422557 3_2:+54102082 Msa0411710:CDS
AAAATCGGGAAGTGAAGCTC+TGG 0.423065 3_2:+54099964 Msa0411710:CDS
GGTTGTTGTTGTTGGATTGG+AGG 0.423316 3_2:-54097113 None:intergenic
GTTTCAGACAACTGTCAAAC+AGG 0.427081 3_2:+54102604 Msa0411710:CDS
TGTTCCAGTAAAACTAAGAA+TGG 0.428432 3_2:-54100246 None:intergenic
CAACCTTGCTAGCTCCTTTG+TGG 0.428639 3_2:-54104156 None:intergenic
GAAGGAGGTGGGATTGGTTG+AGG 0.430428 3_2:-54097047 None:intergenic
CAGCATATATAGCATTCCTC+TGG 0.431524 3_2:-54100151 None:intergenic
TGCAGCAACGCCTTGAATCT+GGG 0.432152 3_2:+54102885 Msa0411710:CDS
GCAGTTATTGACAATGCAAA+AGG 0.433980 3_2:+54102023 Msa0411710:intron
CCTCACCGGCATTGGAAGGT+TGG 0.434736 3_2:-54101267 None:intergenic
ATTAGTCTCAGAGGAGGAAC+TGG 0.436553 3_2:-54100954 None:intergenic
GTGATGTATCTATTGTATCT+TGG 0.436940 3_2:+54104228 Msa0411710:CDS
TCGCACGTGCATTGTTATCA+TGG 0.436976 3_2:-54104780 None:intergenic
CGGTCCTTTACTTCATGAAA+AGG 0.437258 3_2:+54103999 Msa0411710:CDS
CTCACCGGCATTGGAAGGTT+GGG 0.438048 3_2:-54101266 None:intergenic
ATGGGCTGTGATTGTGGCGG+TGG 0.440874 3_2:-54097137 None:intergenic
TAGAAGGCAAGTTACGTTGA+TGG 0.443622 3_2:-54104835 None:intergenic
AAAGCTTCCTGGACAACCTT+GGG 0.444345 3_2:-54100694 None:intergenic
CTCTTGACAAGCTCATTGAT+GGG 0.445198 3_2:+54098865 Msa0411710:CDS
AGTCCAATGCTGATGCTTTG+TGG 0.445348 3_2:+54102145 Msa0411710:CDS
GTAAAGGACCGTTGTTCAGC+TGG 0.445699 3_2:-54103987 None:intergenic
TACCACTTTCACTTCTACTT+CGG 0.446019 3_2:-54101038 None:intergenic
GCCAAAAGATGTCCATGAAA+AGG 0.446472 3_2:+54101306 Msa0411710:CDS
GTCCAATGCTGATGCTTTGT+GGG 0.446960 3_2:+54102146 Msa0411710:CDS
AGATCAGATCCAGTGATAGA+AGG 0.447313 3_2:-54104851 None:intergenic
ATGAGACGGGCACCGGCGTT+AGG 0.447468 3_2:-54097074 None:intergenic
GCTGTTAGATCTTTGCTTAG+AGG 0.451218 3_2:+54097452 Msa0411710:CDS
AACCTTGCTAGCTCCTTTGT+GGG 0.451382 3_2:-54104155 None:intergenic
TGAGGCTTATCTTCATCATC+CGG 0.451744 3_2:-54098551 None:intergenic
ACGGTGTTGAATTGGAAAAT+TGG 0.453357 3_2:-54096982 None:intergenic
CTTTGAGCCCAAGGTTGTCC+AGG 0.453549 3_2:+54100687 Msa0411710:CDS
TTCTGATCTTGGCATTGAGA+TGG 0.454800 3_2:+54101159 Msa0411710:CDS
CAAGGATCTACCAGCAGCAT+TGG 0.455723 3_2:+54102257 Msa0411710:CDS
AGCACTACACCTTGGCTTAA+GGG 0.455982 3_2:-54104659 None:intergenic
AACTGTCAAACAGGCACTTC+AGG 0.456032 3_2:+54102613 Msa0411710:CDS
TTATTGTTGTTGTGAGGGAA+AGG 0.456439 3_2:-54096882 None:intergenic
GAGAGTGTGGTGCGATAGGT+GGG 0.457288 3_2:+54101185 Msa0411710:CDS
TTCCTCCTCTGAGACTAATA+TGG 0.458509 3_2:+54100958 Msa0411710:CDS
AAGTCCATCCTCACCGGCAT+TGG 0.458774 3_2:-54101275 None:intergenic
AGAAGGCTTGAGGCCGCCCT+AGG 0.460118 3_2:+54102099 Msa0411710:CDS
GACACCACAAAAGTTGGAAA+TGG 0.460120 3_2:+54098807 Msa0411710:CDS
GGAAGAAGGTGAAGTGATGC+GGG 0.460953 3_2:-54096555 None:intergenic
AAATGATGAACTTGGCAGGC+AGG 0.461164 3_2:+54101081 Msa0411710:CDS
CAACTTGTAGGAACACATGA+TGG 0.461858 3_2:+54098891 Msa0411710:CDS
CGAGAGTGTGGTGCGATAGG+TGG 0.461859 3_2:+54101184 Msa0411710:CDS
ATATGGATCGGATCCTAATC+CGG 0.462106 3_2:+54097343 Msa0411710:CDS
ACCTATCGCACCACACTCTC+GGG 0.462373 3_2:-54101182 None:intergenic
AATGCAAGATTCACTCAATC+AGG 0.462453 3_2:+54101531 Msa0411710:CDS
ACAATATTGGCAGTAATTTG+AGG 0.462903 3_2:-54098569 None:intergenic
TTGTTGAGGTGGTTGAAGAG+GGG 0.463030 3_2:-54097024 None:intergenic
ATTTGGTTCATTGGACGAAT+CGG 0.464738 3_2:-54101458 None:intergenic
GTTATTGCTGTTCAAATAGT+CGG 0.465040 3_2:+54098590 Msa0411710:CDS
TGTTGAGGTGGTTGAAGAGG+GGG 0.465758 3_2:-54097023 None:intergenic
GGTTGTTGAGGTGGTTGAAG+AGG 0.466717 3_2:-54097026 None:intergenic
CCTTCCAATGCCGGTGAGGA+TGG 0.467485 3_2:+54101271 Msa0411710:CDS
AGCTGAGGCTGCACTTCACC+AGG 0.469685 3_2:-54097299 None:intergenic
ACGAAGTAGGCCCAGATTCA+AGG 0.470044 3_2:-54102895 None:intergenic
GCGTTAGGATTTGAAGGAGG+TGG 0.470524 3_2:-54097059 None:intergenic
TAGATCCTTGTTCATGAAGT+TGG 0.470586 3_2:-54102244 None:intergenic
AGAATTGACACCACAAAAGT+TGG 0.470722 3_2:+54098801 Msa0411710:CDS
CTGGCCCAACCTTCCAATGC+CGG 0.470829 3_2:+54101262 Msa0411710:CDS
GAAGAAGGTGGTGGCGGTGA+AGG 0.471456 3_2:-54096846 None:intergenic
TACAAAAGGGAAGAGACAAA+AGG 0.473506 3_2:+54101378 Msa0411710:CDS
CCTAATCAAAATGATGAACT+TGG 0.474900 3_2:+54101073 Msa0411710:CDS
GGGATTGGTTGAGGTTGTTG+AGG 0.477789 3_2:-54097038 None:intergenic
GATTTCTGAGCGGAAATATG+AGG 0.478102 3_2:+54104178 Msa0411710:CDS
GGCGGTGAAGGAGCGGAGGA+AGG 0.478381 3_2:-54096834 None:intergenic
CCTGGACAAGTTGATTCTAC+TGG 0.478788 3_2:+54101229 Msa0411710:CDS
CAGAATAATCATTAACAGCT+TGG 0.479225 3_2:-54100763 None:intergenic
AGTTGTGAGTTTCATGGATA+GGG 0.479283 3_2:+54104997 Msa0411710:three_prime_UTR
CCGAAAGGAAGGCATTTGAT+TGG 0.480677 3_2:+54097242 Msa0411710:CDS
TTATTCTGTTGACAGACAAA+TGG 0.482116 3_2:+54100778 Msa0411710:CDS
ATTAACAGCGCCAGAGGAGA+TGG 0.483260 3_2:-54097156 None:intergenic
ATTGGTTGAGGTTGTTGAGG+TGG 0.483340 3_2:-54097035 None:intergenic
TTCTCAGAGGGTCACAGACT+TGG 0.483986 3_2:+54098360 Msa0411710:intron
CGTAACTTGCCTTCTATCAC+TGG 0.484515 3_2:+54104842 Msa0411710:CDS
AATTGCATGCACTAGGAGAC+GGG 0.484580 3_2:-54101432 None:intergenic
GGTAGTTATTGTTGTTGTGA+GGG 0.486119 3_2:-54096887 None:intergenic
GCAATCTGTCGACCCAAAAC+CGG 0.486705 3_2:-54097362 None:intergenic
GTTGAATTGGAAAATTGGTC+TGG 0.487326 3_2:-54096977 None:intergenic
CTTGTAGGGACCACAAAATC+GGG 0.487789 3_2:+54099950 Msa0411710:intron
AGATAAAGATATGGGAAGAT+CGG 0.487871 3_2:+54099554 Msa0411710:intron
CGAGGGTCAGAGAAAGCTAA+TGG 0.488149 3_2:+54103915 Msa0411710:CDS
GGGTTAGGGTTAGGGTTTGG+GGG 0.488310 3_2:-54096786 None:intergenic
ATATCAGCATCACTACTAGA+AGG 0.488386 3_2:-54100638 None:intergenic
TGGAAATGGTGAAGCCTTTG+TGG 0.490908 3_2:+54098821 Msa0411710:CDS
CCTTTCGGCACTTTACTACT+CGG 0.491929 3_2:-54097227 None:intergenic
CTCAAAGGAGGAGGTGGAGA+AGG 0.492437 3_2:-54100671 None:intergenic
GCTGTGCAGGTTGATTTACA+TGG 0.492472 3_2:+54104614 Msa0411710:intron
GCACCGGCGTTAGGATTTGA+AGG 0.492766 3_2:-54097065 None:intergenic
GATGTGGATGTTAGGTTGCC+TGG 0.492942 3_2:+54097281 Msa0411710:CDS
ATTGGAGAAAACTGTAAAGA+AGG 0.494861 3_2:+54102275 Msa0411710:CDS
AATGATGAACTTGGCAGGCA+GGG 0.496015 3_2:+54101082 Msa0411710:CDS
ACAAAAGGGAAGAGACAAAA+GGG 0.496492 3_2:+54101379 Msa0411710:CDS
CAGTTGTCTGAAACTGTGCT+TGG 0.498385 3_2:-54102595 None:intergenic
AAGTTGTGAGTTTCATGGAT+AGG 0.498502 3_2:+54104996 Msa0411710:three_prime_UTR
TATTGTTGTTGTGAGGGAAA+GGG 0.498846 3_2:-54096881 None:intergenic
TAACGCCGGTGCCCGTCTCA+TGG 0.499659 3_2:+54097076 Msa0411710:CDS
CTGTTAGATCTTTGCTTAGA+GGG 0.500665 3_2:+54097453 Msa0411710:CDS
AATGTAACAGATAAAGATAT+GGG 0.501039 3_2:+54099546 Msa0411710:intron
AGCTCCTTTGTGGGATCTAG+TGG 0.501320 3_2:-54104146 None:intergenic
GCCTCTTTAGACTCGTCTGC+AGG 0.501400 3_2:+54100443 Msa0411710:CDS
GAGGATGAAGAAGGTGGTGG+CGG 0.502132 3_2:-54096852 None:intergenic
GGGTAGTTATTGTTGTTGTG+AGG 0.502297 3_2:-54096888 None:intergenic
TTGCAGGACATCTCAAATGC+AGG 0.503679 3_2:-54102800 None:intergenic
AGAGTCATTGCCAACGAAGT+AGG 0.503698 3_2:-54102908 None:intergenic
GGGTAAGAGGAGGATGAAGA+AGG 0.504358 3_2:-54096861 None:intergenic
TTCATGGATAGGGTCAAAAT+CGG 0.505456 3_2:+54105007 Msa0411710:three_prime_UTR
GAAAGCTTCCTGGACAACCT+TGG 0.505770 3_2:-54100695 None:intergenic
ACACACTTACTGCTGTGATA+AGG 0.509881 3_2:-54099672 None:intergenic
GTGGGACAATTACTTGTTTG+TGG 0.510178 3_2:-54098652 None:intergenic
AGAAAGTGTGCATATCGAAA+GGG 0.511878 3_2:-54096758 None:intergenic
GCGGTGAAGGAGCGGAGGAA+GGG 0.511933 3_2:-54096833 None:intergenic
CGAGATGCAATTACTGCTGA+AGG 0.513750 3_2:+54100416 Msa0411710:CDS
TGAATCTGGGCCTACTTCGT+TGG 0.516934 3_2:+54102898 Msa0411710:CDS
CTGGACAACCTTGGGCTCAA+AGG 0.517143 3_2:-54100686 None:intergenic
ATCAAAATGATGAACTTGGC+AGG 0.517316 3_2:+54101077 Msa0411710:CDS
GGAATTGGGAAGAAATGTTA+GGG 0.517430 3_2:-54096812 None:intergenic
CGTTAGGATTTGAAGGAGGT+GGG 0.518936 3_2:-54097058 None:intergenic
GTTCCTCTTCCCTTAAGCCA+AGG 0.519277 3_2:+54104650 Msa0411710:CDS
AGGACCGTTGTTCAGCTGGA+TGG 0.519683 3_2:-54103983 None:intergenic
TGAGGTAGAAACAAAGATCC+AGG 0.519840 3_2:+54100994 Msa0411710:CDS
TTCTACTGGAGGGGACTCGC+TGG 0.519985 3_2:+54101243 Msa0411710:CDS
ATTTGTTATGGGTTGAAACA+GGG 0.520370 3_2:+54097401 Msa0411710:CDS
AAAGGGGTTGGAGAAGGTGG+TGG 0.520585 3_2:-54096741 None:intergenic
GGTTTATTGTGTTCAGACAC+TGG 0.521084 3_2:+54100304 Msa0411710:CDS
TTCCGACTCATCTACATCAA+TGG 0.521778 3_2:+54101330 Msa0411710:CDS
TACCCACATCAACCACATCC+TGG 0.522229 3_2:-54101012 None:intergenic
GTTGGATTGGAGGGGTGCTG+AGG 0.522501 3_2:-54097103 None:intergenic
GTTCCAGTAAAACTAAGAAT+GGG 0.522950 3_2:-54100245 None:intergenic
AGGTGGTGGCGGTGAAGGAG+CGG 0.523238 3_2:-54096841 None:intergenic
GGTAAGAACTCTCAACCATC+AGG 0.523880 3_2:+54101400 Msa0411710:CDS
CCAATCGATTTGTCATCCAT+TGG 0.524133 3_2:-54098938 None:intergenic
TCAAGATACCCTTTAAGCTC+AGG 0.524270 3_2:+54100545 Msa0411710:CDS
TGCTGAGGAGAGCCATGAGA+CGG 0.524784 3_2:-54097088 None:intergenic
TGTGCCAGAGTTTGTTCTTG+AGG 0.524944 3_2:-54103947 None:intergenic
AACCTTGGGCTCAAAGGAGG+AGG 0.525226 3_2:-54100680 None:intergenic
GCAACAGAAACTACCTAGCC+AGG 0.525235 3_2:-54098408 None:intergenic
TAAACTGTCAAATATTCAGC+TGG 0.526029 3_2:+54105036 Msa0411710:three_prime_UTR
CTTGGGCTCAAAGGAGGAGG+TGG 0.526489 3_2:-54100677 None:intergenic
CGCACGTGCATTGTTATCAT+GGG 0.529399 3_2:-54104779 None:intergenic
CCAGTAGAATCAACTTGTCC+AGG 0.529695 3_2:-54101229 None:intergenic
TGGCAGTGCCAGCAAATTTG+AGG 0.529733 3_2:-54098632 None:intergenic
TGTATCGCTATTAAATTGGT+CGG 0.530759 3_2:-54100822 None:intergenic
GTTGATTCTACATTCCAGAA+AGG 0.531065 3_2:+54102839 Msa0411710:CDS
GTGGAAAATTTCTGAAGGTC+CGG 0.531628 3_2:+54098532 Msa0411710:CDS
ACCTGCAGACGAGTCTAAAG+AGG 0.532576 3_2:-54100444 None:intergenic
GATTCGTCCAATGAACCAAA+TGG 0.533055 3_2:+54101460 Msa0411710:CDS
TGGGTCTCAGCTAGTGAAGA+AGG 0.533496 3_2:+54099984 Msa0411710:CDS
GGACCGTTGTTCAGCTGGAT+GGG 0.533756 3_2:-54103982 None:intergenic
TAAGAGGAGGATGAAGAAGG+TGG 0.535073 3_2:-54096858 None:intergenic
GTTGTGAGGGAAAGGGTAAG+AGG 0.535240 3_2:-54096874 None:intergenic
TCGATTGGTATCAGCATCAC+AGG 0.536247 3_2:+54098953 Msa0411710:CDS
CTCGAGCACTTCTCTACTCA+AGG 0.536550 3_2:-54103896 None:intergenic
GAGGAGATGGGCTGTGATTG+TGG 0.536890 3_2:-54097143 None:intergenic
GAGGAGGATGAAGAAGGTGG+TGG 0.537407 3_2:-54096855 None:intergenic
AACTGCTGCCAATGCTGCCG+CGG 0.537667 3_2:+54097187 Msa0411710:CDS
TGAAGCTAAAACTGTTACAC+TGG 0.537738 3_2:+54100613 Msa0411710:CDS
TTTCTTTGCCATCAGAAACT+GGG 0.538122 3_2:-54101117 None:intergenic
AATTGCATCTCGTGAAACAC+TGG 0.538200 3_2:-54100405 None:intergenic
GCTGATGCTGAAGCTGAAGC+TGG 0.538875 3_2:-54096929 None:intergenic
AACCTGTAACATGTTGGAAA+CGG 0.540248 3_2:-54102215 None:intergenic
GAATTGCATGCACTAGGAGA+CGG 0.541168 3_2:-54101433 None:intergenic
TTTGTTATGGGTTGAAACAG+GGG 0.542294 3_2:+54097402 Msa0411710:CDS
GAGAGCCATGAGACGGGCAC+CGG 0.543288 3_2:-54097081 None:intergenic
AGGAAGAAGGTGAAGTGATG+CGG 0.545207 3_2:-54096556 None:intergenic
GTTGACGCATGTCAAAAGTA+AGG 0.545493 3_2:-54105105 None:intergenic
GTTGCAGCATTGCCTCATGC+AGG 0.547266 3_2:+54100107 Msa0411710:CDS
AACAGTTCCAGTTACAAAAG+AGG 0.547439 3_2:+54102074 Msa0411710:CDS
GCTGAGGAGAGCCATGAGAC+GGG 0.547731 3_2:-54097087 None:intergenic
AGCCCACAAAGCATCAGCAT+TGG 0.548262 3_2:-54102148 None:intergenic
CATTGTTATCATGGGATCTG+AGG 0.550311 3_2:-54104771 None:intergenic
TCAAGACAGTCACTTGGAAG+CGG 0.551366 3_2:-54096521 None:intergenic
TGGTGATGGTGGTGATCGTA+AGG 0.551385 3_2:-54096909 None:intergenic
ATCTATCTGATTGAGGAAGA+AGG 0.552487 3_2:-54096569 None:intergenic
CCATCCTCACCGGCATTGGA+AGG 0.553455 3_2:-54101271 None:intergenic
CACCTGCATCTAATACAAAA+GGG 0.554215 3_2:+54101365 Msa0411710:CDS
CTGTGTTCAGACCTCATGAT+GGG 0.555408 3_2:+54099593 Msa0411710:CDS
TCGAAAGGGGTTGGAGAAGG+TGG 0.555421 3_2:-54096744 None:intergenic
CCTCCACCATTAGAAAATGC+GGG 0.555705 3_2:+54100365 Msa0411710:CDS
GACAAATGGATACAATTCAC+AGG 0.557685 3_2:+54100792 Msa0411710:CDS
GCAACCTCAAGAACAAACTC+TGG 0.559208 3_2:+54103943 Msa0411710:CDS
GCATTGGCAGCAGTTATCGC+CGG 0.559856 3_2:-54097179 None:intergenic
GTCTTGAAGTCCATCCTCAC+CGG 0.561202 3_2:-54101281 None:intergenic
GTAGTAAAGTGCCGAAAGGA+AGG 0.561365 3_2:+54097231 Msa0411710:CDS
GCCCGAGAGTGTGGTGCGAT+AGG 0.561638 3_2:+54101181 Msa0411710:CDS
GCACTAGGAGACGGGGAAGA+CGG 0.562596 3_2:-54101424 None:intergenic
ACAATATGATCAGGCTGGTG+TGG 0.565224 3_2:-54099649 None:intergenic
CTGATTTGTCAATGTGCCAA+TGG 0.565563 3_2:+54098922 Msa0411710:CDS
TGATGACATGCAATAAAAGA+CGG 0.565984 3_2:-54104883 None:intergenic
TTTGTATTAGATGCAGGTGA+TGG 0.566249 3_2:-54101361 None:intergenic
TTGTTGTTGTTGGATTGGAG+GGG 0.566727 3_2:-54097111 None:intergenic
TGCCGAAGTAGAAGTGAAAG+TGG 0.567144 3_2:+54101036 Msa0411710:CDS
ATGATGAACTTGGCAGGCAG+GGG 0.567889 3_2:+54101083 Msa0411710:CDS
ATTGAGATGGCCCGAGAGTG+TGG 0.569188 3_2:+54101172 Msa0411710:CDS
TAATCAAACCTGTAACATGT+TGG 0.569223 3_2:-54102221 None:intergenic
AACTTGTAGGAACACATGAT+GGG 0.569461 3_2:+54098892 Msa0411710:CDS
ATCCCACAAAGGAGCTAGCA+AGG 0.570393 3_2:+54104153 Msa0411710:CDS
TGGTGGCGGTGAAGGAGCGG+AGG 0.572382 3_2:-54096838 None:intergenic
AGAATCAACTTGCTCAAACA+TGG 0.573208 3_2:-54102825 None:intergenic
TTAACAGCGCCAGAGGAGAT+GGG 0.573510 3_2:-54097155 None:intergenic
GCTGAAGCTGAAGCTGGTGA+TGG 0.573656 3_2:-54096923 None:intergenic
ACACCTTGGCTTAAGGGAAG+AGG 0.574273 3_2:-54104653 None:intergenic
TACCATTGATGTAGATGAGT+CGG 0.574582 3_2:-54101332 None:intergenic
AAGAAAGTGTGCATATCGAA+AGG 0.575176 3_2:-54096759 None:intergenic
TGATAAACTTGCTCAAAGAT+GGG 0.576482 3_2:-54104803 None:intergenic
TAATCCCGAATCAACTCGCA+TGG 0.576654 3_2:+54100193 Msa0411710:CDS
ACATGTCCCGAAAGCTCTCG+TGG 0.578490 3_2:+54104720 Msa0411710:CDS
GCCTCCACCATTAGAAAATG+CGG 0.579140 3_2:+54100364 Msa0411710:CDS
TCATTTACATGTCGTCAGCA+TGG 0.579551 3_2:-54104909 None:intergenic
TCAATCTGTGATTAGATTTG+GGG 0.580705 3_2:-54096655 None:intergenic
TGGAGGATCTTCTGCCACAA+AGG 0.581110 3_2:-54098835 None:intergenic
TCTTGACAAGCTCATTGATG+GGG 0.581398 3_2:+54098866 Msa0411710:CDS
CGCCGGATTAACAGCGCCAG+AGG 0.581882 3_2:-54097162 None:intergenic
TGAAGTGCAGCCTCAGCTTG+AGG 0.582585 3_2:+54097304 Msa0411710:CDS
AAGAATGCATCCTTAAGAGA+CGG 0.583417 3_2:-54100077 None:intergenic
GTGTGCATATCGAAAGGGGT+TGG 0.585473 3_2:-54096753 None:intergenic
AGAAACAAAGATCCAGGATG+TGG 0.585960 3_2:+54101000 Msa0411710:CDS
GAAGTAGAAGTGAAAGTGGT+AGG 0.586003 3_2:+54101040 Msa0411710:CDS
AGCTCGAAGCTACTGTAGCT+AGG 0.586804 3_2:+54102567 Msa0411710:CDS
AAGATGTTCATCTCCTGGCT+AGG 0.587176 3_2:+54098395 Msa0411710:CDS
TCTAACTTGAGTGATCATGT+TGG 0.587418 3_2:+54100737 Msa0411710:CDS
CAGCCTAATCAACGCTGCCG+CGG 0.587536 3_2:-54097204 None:intergenic
AGTAAAACTAAGAATGGGCA+TGG 0.590667 3_2:-54100240 None:intergenic
CCACAAAACCCAGTTTCTGA+TGG 0.591728 3_2:+54101109 Msa0411710:CDS
AGCATATATAGCATTCCTCT+GGG 0.591999 3_2:-54100150 None:intergenic
TTTATGCGATAGAGAGGAGT+GGG 0.592717 3_2:+54102503 Msa0411710:intron
GGAATTTCAAGACAGTCACT+TGG 0.592961 3_2:-54096527 None:intergenic
ATTGTTATCATGGGATCTGA+GGG 0.593684 3_2:-54104770 None:intergenic
TTTGTGTGGAAAATTTCTGA+AGG 0.594082 3_2:+54098527 Msa0411710:CDS
GTGATAAGGACAATATGATC+AGG 0.594619 3_2:-54099658 None:intergenic
GAAGGCTTGAGGCCGCCCTA+GGG 0.594828 3_2:+54102100 Msa0411710:CDS
TGATCACTCAAGTTAGATTG+TGG 0.594924 3_2:-54100731 None:intergenic
GATGACATGCAATAAAAGAC+GGG 0.595864 3_2:-54104882 None:intergenic
GCTGTGTTCAGACCTCATGA+TGG 0.596771 3_2:+54099592 Msa0411710:CDS
GACAACCTTGGGCTCAAAGG+AGG 0.599545 3_2:-54100683 None:intergenic
ATATCGAAAGGGGTTGGAGA+AGG 0.600713 3_2:-54096747 None:intergenic
ACAGTTCCAGTTACAAAAGA+GGG 0.601257 3_2:+54102075 Msa0411710:CDS
AAATCGGGAAGTGAAGCTCT+GGG 0.602446 3_2:+54099965 Msa0411710:CDS
TTCGTTGGCAATGACTCTAA+GGG 0.602876 3_2:+54102913 Msa0411710:CDS
TGAGGTCTGAACACAGCAAG+TGG 0.603487 3_2:-54099586 None:intergenic
GACGGGGAAGACGGACCTGA+TGG 0.604450 3_2:-54101415 None:intergenic
TGCAGGACATCTCAAATGCA+GGG 0.605690 3_2:-54102799 None:intergenic
GAAGTGAAAGCACTACACCT+TGG 0.605965 3_2:-54104667 None:intergenic
GGACAAGTTGATTCTACTGG+AGG 0.606340 3_2:+54101232 Msa0411710:CDS
TCTCAGCTAGTGAAGAAGGT+TGG 0.606769 3_2:+54099988 Msa0411710:CDS
GATCCAGGATGTGGTTGATG+TGG 0.607715 3_2:+54101009 Msa0411710:CDS
GAAGCTGAAGCTGGTGATGG+TGG 0.607808 3_2:-54096920 None:intergenic
TAAGGACAATATGATCAGGC+TGG 0.608151 3_2:-54099654 None:intergenic
TCGGTTGAATTGCATGCACT+AGG 0.610664 3_2:-54101439 None:intergenic
TGCTGTTCAAATAGTCGGAG+AGG 0.612426 3_2:+54098595 Msa0411710:CDS
ATCAGCATCACAGGATGGCA+CGG 0.614223 3_2:+54098962 Msa0411710:CDS
TTCTACATTCCAGAAAGGCA+TGG 0.615387 3_2:+54102844 Msa0411710:CDS
GTATTAGATGCAGGTGATGG+TGG 0.615793 3_2:-54101358 None:intergenic
GGGCATGGTCACAGTAAACT+CGG 0.617383 3_2:-54100225 None:intergenic
GTGAGGGAAAGGGTAAGAGG+AGG 0.617899 3_2:-54096871 None:intergenic
AACATTATCATCTACTATCG+CGG 0.618969 3_2:+54102353 Msa0411710:CDS
CCATCAATGAGCTTGTCAAG+AGG 0.619243 3_2:-54098864 None:intergenic
GACAAGTTGATTCTACTGGA+GGG 0.619724 3_2:+54101233 Msa0411710:CDS
AGATAATGTACAAACCTGGA+AGG 0.622932 3_2:-54102379 None:intergenic
GATTACCAACTTCATGAACA+AGG 0.623210 3_2:+54102239 Msa0411710:CDS
ACAAGTTGATTCTACTGGAG+GGG 0.623513 3_2:+54101234 Msa0411710:CDS
CAAGCAAGTAGCACTGAGAG+TGG 0.625169 3_2:+54100515 Msa0411710:CDS
TGATCATGTTGTGTATGATG+TGG 0.628089 3_2:+54097265 Msa0411710:CDS
CAGATGGCCGTGTCTTTGTG+TGG 0.629133 3_2:+54098513 Msa0411710:CDS
GTGTGAGATCTATCTGATTG+AGG 0.629980 3_2:-54096576 None:intergenic
CCAATGGATGACAAATCGAT+TGG 0.632550 3_2:+54098938 Msa0411710:CDS
AGAGTGTGGTGCGATAGGTG+GGG 0.633015 3_2:+54101186 Msa0411710:CDS
TATGGTCGACAGAGTGAGTG+AGG 0.634229 3_2:+54100976 Msa0411710:CDS
CCAACCTTCCAATGCCGGTG+AGG 0.635391 3_2:+54101267 Msa0411710:CDS
ACTTACATTACAGAGGAACC+TGG 0.635437 3_2:+54101211 Msa0411710:CDS
TAACTTGAGTGATCATGTTG+GGG 0.636096 3_2:+54100739 Msa0411710:CDS
TTTGCTTAGAGGGCACACTC+AGG 0.636776 3_2:+54097463 Msa0411710:CDS
GCCGATTACGAAATATGGAT+CGG 0.637664 3_2:+54097331 Msa0411710:CDS
TTCCATGCTTCTCCCTAGGG+CGG 0.637783 3_2:-54102112 None:intergenic
TGAAAGTGGTAGGTGAAGCA+AGG 0.639440 3_2:+54101050 Msa0411710:CDS
TTTGTGGGCTAGAATTCAAG+AGG 0.639602 3_2:+54102161 Msa0411710:CDS
GATGGTGTAACCAGATGAGT+TGG 0.640662 3_2:-54100917 None:intergenic
AAAAGAGGGTAGAAGGCTTG+AGG 0.641978 3_2:+54102089 Msa0411710:CDS
ATAGAGAGGAGTGGGCGACA+AGG 0.643114 3_2:+54102511 Msa0411710:intron
AAATAGCAATCCTCAAATTG+CGG 0.643611 3_2:+54101507 Msa0411710:CDS
GTTGAAACAGGGGAATATCA+GGG 0.644466 3_2:+54097412 Msa0411710:CDS
GTGTAGGGAATGAAATTGAA+CGG 0.645057 3_2:-54097001 None:intergenic
AAAACAGGATGCCCATCATG+AGG 0.647371 3_2:-54099604 None:intergenic
GGCCGCCCTAGGGAGAAGCA+TGG 0.647761 3_2:+54102110 Msa0411710:CDS
ATCGGCGCAACCTCAAGCTG+AGG 0.648348 3_2:-54097314 None:intergenic
GCAGAAACAAATGACAATGA+CGG 0.648353 3_2:+54102050 Msa0411710:CDS
TTGGTATCAGCATCACAGGA+TGG 0.653833 3_2:+54098957 Msa0411710:CDS
TCCCAAGCAATACTGAAACA+TGG 0.654560 3_2:+54100015 Msa0411710:CDS
GAAAGTGTGCATATCGAAAG+GGG 0.655799 3_2:-54096757 None:intergenic
TTCTGAGCGGAAATATGAGG+AGG 0.657507 3_2:+54104181 Msa0411710:CDS
CTTGAGTAGAGAAGTGCTCG+AGG 0.660682 3_2:+54103897 Msa0411710:CDS
CTTTATGCGATAGAGAGGAG+TGG 0.665988 3_2:+54102502 Msa0411710:intron
CCGAGTAGTAAAGTGCCGAA+AGG 0.667122 3_2:+54097227 Msa0411710:CDS
GACCATATTAGTCTCAGAGG+AGG 0.670902 3_2:-54100960 None:intergenic
TGTAGGAACACATGATGGGG+AGG 0.672359 3_2:+54098896 Msa0411710:CDS
TTGAGTAGAGAAGTGCTCGA+GGG 0.672366 3_2:+54103898 Msa0411710:CDS
CCTCCTTCAAATCCTAACGC+CGG 0.674882 3_2:+54097062 Msa0411710:CDS
ATCCAGGATGTGGTTGATGT+GGG 0.675092 3_2:+54101010 Msa0411710:CDS
GAGAGGAGTGGGCGACAAGG+CGG 0.676880 3_2:+54102514 Msa0411710:intron
AGTAAAAGCAGACCTGCATG+AGG 0.678389 3_2:-54100119 None:intergenic
GTCGACCATATTAGTCTCAG+AGG 0.678657 3_2:-54100963 None:intergenic
CTGCCCATCCAGCTGAACAA+CGG 0.685448 3_2:+54103979 Msa0411710:CDS
ACTTGTAGGAACACATGATG+GGG 0.688108 3_2:+54098893 Msa0411710:CDS
TGAACAATATGTTCCCCATG+AGG 0.697153 3_2:-54100281 None:intergenic
CCGGCGTTAGGATTTGAAGG+AGG 0.701239 3_2:-54097062 None:intergenic
GAGATGGGCTGTGATTGTGG+CGG 0.702622 3_2:-54097140 None:intergenic
GGTGATGGTGGTGATCGTAA+GGG 0.706295 3_2:-54096908 None:intergenic
GCTCTCGTGGATGACAGACG+TGG 0.709530 3_2:+54104733 Msa0411710:CDS
TGGGGAGACTTACATTACAG+AGG 0.718194 3_2:+54101204 Msa0411710:CDS
ATTGCATGCACTAGGAGACG+GGG 0.723410 3_2:-54101431 None:intergenic
TAGCAAGGTTGATTTCTGAG+CGG 0.729407 3_2:+54104168 Msa0411710:CDS
TGACGATTAGGATAAACTGG+AGG 0.733228 3_2:+54105132 Msa0411710:three_prime_UTR
GGCACCACTAGATCCCACAA+AGG 0.749952 3_2:+54104142 Msa0411710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAGTATTTTATTTGAA+AGG + chr3_2:54097953-54097972 Msa0411710:intron 10.0%
!!! TTTTTATTTTGATTCATATT+TGG + chr3_2:54099042-54099061 Msa0411710:intron 10.0%
!!! TTTTATTTTGATTCATATTT+GGG + chr3_2:54099043-54099062 Msa0411710:intron 10.0%
!! CTAAAATATTAAATACTAAT+AGG - chr3_2:54099162-54099181 None:intergenic 10.0%
!!! TAATATAACTTTTAATAGAA+AGG - chr3_2:54099357-54099376 None:intergenic 10.0%
!!! ATAAATAAAGTTAGTTTTAT+GGG - chr3_2:54099880-54099899 None:intergenic 10.0%
!!! TATAAATAAAGTTAGTTTTA+TGG - chr3_2:54099881-54099900 None:intergenic 10.0%
!! AAAAAAAACATAAAATTAAG+CGG - chr3_2:54103046-54103065 None:intergenic 10.0%
!! TTTAAAAAATAAAAGAATCT+AGG - chr3_2:54103669-54103688 None:intergenic 10.0%
!!! TTCTATTTATTTTTTAACAA+CGG + chr3_2:54105158-54105177 Msa0411710:three_prime_UTR 10.0%
!!! AATAAGTCTTATATTTGTTA+TGG + chr3_2:54097389-54097408 Msa0411710:CDS 15.0%
!!! ATAAGTCTTATATTTGTTAT+GGG + chr3_2:54097390-54097409 Msa0411710:CDS 15.0%
!!! TTTGTAATTGTTTTGTAATT+GGG + chr3_2:54097527-54097546 Msa0411710:intron 15.0%
!!! GTTTTATCTTTATCAATATT+AGG + chr3_2:54097669-54097688 Msa0411710:intron 15.0%
!!! ATTGTAAAGTATTATATTGA+TGG + chr3_2:54097984-54098003 Msa0411710:intron 15.0%
!! ATCAAATTGTATGTTATTAA+TGG + chr3_2:54098278-54098297 Msa0411710:intron 15.0%
!!! TTTTTTTAATTATTCTCAGA+GGG + chr3_2:54098348-54098367 Msa0411710:intron 15.0%
!!! ATTAATTAACATTTTCATTC+AGG + chr3_2:54098743-54098762 Msa0411710:intron 15.0%
!! TCTATTAAAAGTTATATTAC+AGG + chr3_2:54099358-54099377 Msa0411710:intron 15.0%
!! CTATTAAAAGTTATATTACA+GGG + chr3_2:54099359-54099378 Msa0411710:intron 15.0%
!!! TAAATAAAGTTAGTTTTATG+GGG - chr3_2:54099879-54099898 None:intergenic 15.0%
!! AGAATTAAGAGTAAATAATT+TGG + chr3_2:54102975-54102994 Msa0411710:intron 15.0%
!! ATAGATGAAAATAATAATTG+TGG - chr3_2:54103567-54103586 None:intergenic 15.0%
!! TTTAAAAGCTATTAATTTCT+TGG + chr3_2:54103683-54103702 Msa0411710:intron 15.0%
!! TTATTCTCTTGTTCATTTAT+TGG + chr3_2:54097501-54097520 Msa0411710:intron 20.0%
!!! CTTTGTAATTGTTTTGTAAT+TGG + chr3_2:54097526-54097545 Msa0411710:intron 20.0%
!! TAGATTTGATGAAAAAAATG+AGG + chr3_2:54097616-54097635 Msa0411710:intron 20.0%
!! CATATCATAACATTTGTATA+AGG + chr3_2:54097709-54097728 Msa0411710:intron 20.0%
!!! AATAGTTCAATGTTATTTGT+TGG + chr3_2:54097864-54097883 Msa0411710:intron 20.0%
!!! CTGTTATAATTTTGTATGAA+GGG + chr3_2:54098140-54098159 Msa0411710:intron 20.0%
!!! CAGCAAATAAATTTTGAATA+AGG - chr3_2:54098206-54098225 None:intergenic 20.0%
!! CTTATTCAAAATTTATTTGC+TGG + chr3_2:54098204-54098223 Msa0411710:intron 20.0%
!! GATTTAATTAGAGGATAAAA+CGG - chr3_2:54098324-54098343 None:intergenic 20.0%
!! AAAAAGAGAGATTTAATTAG+AGG - chr3_2:54098333-54098352 None:intergenic 20.0%
!!! CTTTTTTTAATTATTCTCAG+AGG + chr3_2:54098347-54098366 Msa0411710:intron 20.0%
!! ATTAATATCACAAGAATACA+AGG - chr3_2:54098729-54098748 None:intergenic 20.0%
!! GAAAATCAAACACAAATATA+TGG + chr3_2:54099184-54099203 Msa0411710:intron 20.0%
!! AATATATACAGTAGACTTAA+TGG + chr3_2:54099244-54099263 Msa0411710:intron 20.0%
!! CAATCAAACAAATAAAAAAC+AGG - chr3_2:54099489-54099508 None:intergenic 20.0%
!! AAATGTAACAGATAAAGATA+TGG + chr3_2:54099545-54099564 Msa0411710:intron 20.0%
!! AATGTAACAGATAAAGATAT+GGG + chr3_2:54099546-54099565 Msa0411710:intron 20.0%
!!! AATTGATTTTGTTTTTGAAG+TGG + chr3_2:54099817-54099836 Msa0411710:intron 20.0%
!!! AAATAAAGTTAGTTTTATGG+GGG - chr3_2:54099878-54099897 None:intergenic 20.0%
!! AAAGAAATAAAAAACACATC+TGG - chr3_2:54101846-54101865 None:intergenic 20.0%
!! AAATACACAATACAATTCTT+TGG - chr3_2:54101965-54101984 None:intergenic 20.0%
!! AAAGAATTGTATTGTGTATT+TGG + chr3_2:54101964-54101983 Msa0411710:intron 20.0%
!! AAGAATTGTATTGTGTATTT+GGG + chr3_2:54101965-54101984 Msa0411710:intron 20.0%
!!! TACAACAAAAATGAATGTTT+TGG + chr3_2:54103065-54103084 Msa0411710:intron 20.0%
!! TTCAGTTTATATGGTAATAA+TGG + chr3_2:54104087-54104106 Msa0411710:intron 20.0%
!!! TATTTTATTTAGTTGAGATG+AGG + chr3_2:54104414-54104433 Msa0411710:intron 20.0%
!!! ATTTTATTTAGTTGAGATGA+GGG + chr3_2:54104415-54104434 Msa0411710:intron 20.0%
!! TAAATTACTTTCTAATCCTT+CGG + chr3_2:54104459-54104478 Msa0411710:intron 20.0%
! ATCAATCTGTGATTAGATTT+GGG - chr3_2:54096659-54096678 None:intergenic 25.0%
! AATCAATCTGTGATTAGATT+TGG - chr3_2:54096660-54096679 None:intergenic 25.0%
! TCAATCAATCAAATTCAATC+TGG + chr3_2:54096694-54096713 Msa0411710:five_prime_UTR 25.0%
! TTTGTAATTGGGAAAATTAG+AGG + chr3_2:54097538-54097557 Msa0411710:intron 25.0%
! AAAATTAGAGGAAAGACTTT+AGG + chr3_2:54097550-54097569 Msa0411710:intron 25.0%
! AAATTAGAGGAAAGACTTTA+GGG + chr3_2:54097551-54097570 Msa0411710:intron 25.0%
! AGATGAAAAAGATACAAATG+TGG + chr3_2:54097889-54097908 Msa0411710:intron 25.0%
! AAGTAACAGATATCAACAAT+TGG + chr3_2:54098047-54098066 Msa0411710:intron 25.0%
!! GCTGTTATAATTTTGTATGA+AGG + chr3_2:54098139-54098158 Msa0411710:intron 25.0%
!! TGTTGCCTGAAATTTTTAAA+TGG + chr3_2:54098425-54098444 Msa0411710:intron 25.0%
!! TTTGTTTGTCTATGGATTAT+GGG + chr3_2:54098453-54098472 Msa0411710:intron 25.0%
!!! TTCTTTCTTTTTTACAGTGT+TGG + chr3_2:54098488-54098507 Msa0411710:intron 25.0%
! TTGAACAGCAATAACAATAT+TGG - chr3_2:54098585-54098604 None:intergenic 25.0%
!! GTTCTAAATCTTAAAAGCAA+TGG + chr3_2:54098691-54098710 Msa0411710:intron 25.0%
!! AATCTTAAAAGCAATGGTTT+TGG + chr3_2:54098697-54098716 Msa0411710:intron 25.0%
!!! ATTCAGGAAATTTTGATAGT+TGG + chr3_2:54098759-54098778 Msa0411710:intron 25.0%
!!! GAAATTTTGATAGTTGGTAT+GGG + chr3_2:54098765-54098784 Msa0411710:CDS 25.0%
! GATTTCTTCAACAATTTAAG+TGG + chr3_2:54099080-54099099 Msa0411710:intron 25.0%
!! AACTTTTAATAGAAAGGACA+AGG - chr3_2:54099351-54099370 None:intergenic 25.0%
! TTCAAACTAATGAAGATAAC+AGG - chr3_2:54099423-54099442 None:intergenic 25.0%
! AAAAATGTAGCAGAAAAAAC+AGG - chr3_2:54099622-54099641 None:intergenic 25.0%
!!! ATCATTTTTTATAATGCAGC+AGG + chr3_2:54099697-54099716 Msa0411710:intron 25.0%
!!! TTGTTTTTACTTAACCTTGT+AGG + chr3_2:54099935-54099954 Msa0411710:intron 25.0%
!!! TGTTTTTACTTAACCTTGTA+GGG + chr3_2:54099936-54099955 Msa0411710:intron 25.0%
! TCTTTGTATCGCTATTAAAT+TGG - chr3_2:54100829-54100848 None:intergenic 25.0%
! TGATGACAATAAAAACAAAC+AGG + chr3_2:54100850-54100869 Msa0411710:CDS 25.0%
!!! CTTTTTAGAGTGTATTTAGA+TGG + chr3_2:54101617-54101636 Msa0411710:intron 25.0%
! TAGCGTTTAAAGAGAAAAAT+GGG - chr3_2:54101776-54101795 None:intergenic 25.0%
! AATAAAAAACACATCTGGAT+GGG - chr3_2:54101841-54101860 None:intergenic 25.0%
! AAATAAAAAACACATCTGGA+TGG - chr3_2:54101842-54101861 None:intergenic 25.0%
! ATTTCTTTATATTAAGGCTG+AGG + chr3_2:54101858-54101877 Msa0411710:intron 25.0%
!!! CTACTTTTTTACTTTTTCGA+TGG + chr3_2:54101908-54101927 Msa0411710:intron 25.0%
!! TAGTCCATTTTCTTCTTATT+TGG + chr3_2:54102001-54102020 Msa0411710:intron 25.0%
! TGTGAAATAATTTCATATGC+AGG + chr3_2:54102742-54102761 Msa0411710:intron 25.0%
! TTTAACACTCACTTTCTTAT+TGG + chr3_2:54103406-54103425 Msa0411710:intron 25.0%
! TTAAACACTCACTTCATTAT+TGG - chr3_2:54103504-54103523 None:intergenic 25.0%
! TATATCAAAGCAGAAATAGA+TGG - chr3_2:54103629-54103648 None:intergenic 25.0%
! CCATATAAACTGAATAGTAT+GGG - chr3_2:54104081-54104100 None:intergenic 25.0%
! ACCATATAAACTGAATAGTA+TGG - chr3_2:54104082-54104101 None:intergenic 25.0%
! GTTCAATTATTATCTCTGAT+TGG + chr3_2:54104323-54104342 Msa0411710:intron 25.0%
! TATACTACATGTTAAGGTAA+TGG - chr3_2:54104508-54104527 None:intergenic 25.0%
! TACCTTAACATGTAGTATAT+TGG + chr3_2:54104509-54104528 Msa0411710:intron 25.0%
TCAATCTGTGATTAGATTTG+GGG - chr3_2:54096658-54096677 None:intergenic 30.0%
!! TATTTGTTATGGGTTGAAAC+AGG + chr3_2:54097400-54097419 Msa0411710:CDS 30.0%
!! ATTTGTTATGGGTTGAAACA+GGG + chr3_2:54097401-54097420 Msa0411710:CDS 30.0%
AATTAGAGGAAAGACTTTAG+GGG + chr3_2:54097552-54097571 Msa0411710:intron 30.0%
TATTAGGTCAAAAGAGTTTG+TGG + chr3_2:54097685-54097704 Msa0411710:intron 30.0%
TCTTTATGAATGTTTGCTCT+AGG + chr3_2:54097798-54097817 Msa0411710:intron 30.0%
!! TGTTTTGTTAATTGTAGCAG+AGG + chr3_2:54098171-54098190 Msa0411710:intron 30.0%
TTAATGGCATAATCACTGAA+AGG + chr3_2:54098294-54098313 Msa0411710:intron 30.0%
CAAGGCCATTTAAAAATTTC+AGG - chr3_2:54098433-54098452 None:intergenic 30.0%
AATCCATAGACAAACAAACA+AGG - chr3_2:54098451-54098470 None:intergenic 30.0%
! GTTTGTTTGTCTATGGATTA+TGG + chr3_2:54098452-54098471 Msa0411710:intron 30.0%
! AAATTTTCCACACAAAGACA+CGG - chr3_2:54098523-54098542 None:intergenic 30.0%
TTTGTGTGGAAAATTTCTGA+AGG + chr3_2:54098527-54098546 Msa0411710:CDS 30.0%
ACAATATTGGCAGTAATTTG+AGG - chr3_2:54098572-54098591 None:intergenic 30.0%
! GTTATTGCTGTTCAAATAGT+CGG + chr3_2:54098590-54098609 Msa0411710:CDS 30.0%
ACAACAAAACAAGATAGTGT+GGG - chr3_2:54098673-54098692 None:intergenic 30.0%
AACAACAAAACAAGATAGTG+TGG - chr3_2:54098674-54098693 None:intergenic 30.0%
!! GGAAATTTTGATAGTTGGTA+TGG + chr3_2:54098764-54098783 Msa0411710:intron 30.0%
GAATGTTCTTTGAACATATG+TGG + chr3_2:54099125-54099144 Msa0411710:intron 30.0%
AGTCACTAGAAAGATAACAA+TGG + chr3_2:54099211-54099230 Msa0411710:intron 30.0%
TGGGAAACAAATATGAATCT+GGG + chr3_2:54099291-54099310 Msa0411710:intron 30.0%
! ATATTACAGGGTTGTTTCAT+TGG + chr3_2:54099371-54099390 Msa0411710:intron 30.0%
! TATTACAGGGTTGTTTCATT+GGG + chr3_2:54099372-54099391 Msa0411710:intron 30.0%
GTTTCATTGGGAAAAATTAC+TGG + chr3_2:54099384-54099403 Msa0411710:intron 30.0%
AATAGAAGACAAACGTGATT+AGG - chr3_2:54099522-54099541 None:intergenic 30.0%
AGATAAAGATATGGGAAGAT+CGG + chr3_2:54099554-54099573 Msa0411710:intron 30.0%
CTGATAACAGTAATGAACTA+CGG - chr3_2:54099850-54099869 None:intergenic 30.0%
GTTCCAGTAAAACTAAGAAT+GGG - chr3_2:54100248-54100267 None:intergenic 30.0%
TGTTCCAGTAAAACTAAGAA+TGG - chr3_2:54100249-54100268 None:intergenic 30.0%
CAGAATAATCATTAACAGCT+TGG - chr3_2:54100766-54100785 None:intergenic 30.0%
TTATTCTGTTGACAGACAAA+TGG + chr3_2:54100778-54100797 Msa0411710:CDS 30.0%
TGTATCGCTATTAAATTGGT+CGG - chr3_2:54100825-54100844 None:intergenic 30.0%
GTTGCTTAAAAATGACAGAA+GGG - chr3_2:54100898-54100917 None:intergenic 30.0%
!!! CCAAGTTCATCATTTTGATT+AGG - chr3_2:54101076-54101095 None:intergenic 30.0%
CCTAATCAAAATGATGAACT+TGG + chr3_2:54101073-54101092 Msa0411710:CDS 30.0%
! AGAAAAATTCTTTTGCTCTC+AGG + chr3_2:54101135-54101154 Msa0411710:CDS 30.0%
! TGAAATTCCATTTGGTTCAT+TGG - chr3_2:54101470-54101489 None:intergenic 30.0%
!!! GATTGCTATTTTCAGTACAT+GGG - chr3_2:54101498-54101517 None:intergenic 30.0%
AAATAGCAATCCTCAAATTG+CGG + chr3_2:54101507-54101526 Msa0411710:CDS 30.0%
! ATCGATGGGAAGTTTTTATT+TGG - chr3_2:54101715-54101734 None:intergenic 30.0%
CTAGCGTTTAAAGAGAAAAA+TGG - chr3_2:54101777-54101796 None:intergenic 30.0%
ACTGCCAAATAAGAAGAAAA+TGG - chr3_2:54102008-54102027 None:intergenic 30.0%
TAATCAAACCTGTAACATGT+TGG - chr3_2:54102224-54102243 None:intergenic 30.0%
ATTGGAGAAAACTGTAAAGA+AGG + chr3_2:54102275-54102294 Msa0411710:CDS 30.0%
! GATAATGTTTTCTCAATAGC+AGG - chr3_2:54102342-54102361 None:intergenic 30.0%
AACATTATCATCTACTATCG+CGG + chr3_2:54102353-54102372 Msa0411710:CDS 30.0%
TCAAAGATAATGTACAAACC+TGG - chr3_2:54102386-54102405 None:intergenic 30.0%
!!! ATGAATGTTTTGGCTTAATG+TGG + chr3_2:54103075-54103094 Msa0411710:intron 30.0%
!!! TGAATGTTTTGGCTTAATGT+GGG + chr3_2:54103076-54103095 Msa0411710:intron 30.0%
ATACAAAACAACAGGGTAAA+GGG - chr3_2:54103113-54103132 None:intergenic 30.0%
AATACAAAACAACAGGGTAA+AGG - chr3_2:54103114-54103133 None:intergenic 30.0%
GCATCAAATACAAAACAACA+GGG - chr3_2:54103120-54103139 None:intergenic 30.0%
AGCATCAAATACAAAACAAC+AGG - chr3_2:54103121-54103140 None:intergenic 30.0%
! TGCAAGTAATTTGAGACATT+TGG - chr3_2:54103153-54103172 None:intergenic 30.0%
AAATGTCTCAAATTACTTGC+AGG + chr3_2:54103152-54103171 Msa0411710:intron 30.0%
AATGTCTCAAATTACTTGCA+GGG + chr3_2:54103153-54103172 Msa0411710:intron 30.0%
TACAGTGAAAGAGAAAACAT+GGG + chr3_2:54103246-54103265 Msa0411710:intron 30.0%
AATTGCAATTAATATCCGAG+TGG - chr3_2:54103307-54103326 None:intergenic 30.0%
CTCGGATATTAATTGCAATT+TGG + chr3_2:54103307-54103326 Msa0411710:intron 30.0%
AAGAAAGTGAGTGTTAAAGA+GGG - chr3_2:54103404-54103423 None:intergenic 30.0%
TAAGAAAGTGAGTGTTAAAG+AGG - chr3_2:54103405-54103424 None:intergenic 30.0%
!! TTCATTATTGGCTCAAATCA+AGG - chr3_2:54103492-54103511 None:intergenic 30.0%
! TCTAGACTAGATAAAGCTTT+TGG + chr3_2:54103766-54103785 Msa0411710:intron 30.0%
AGAATACCAACATTGAGATA+CGG - chr3_2:54103824-54103843 None:intergenic 30.0%
! AACTGATGATGCTGAATTAA+TGG - chr3_2:54103869-54103888 None:intergenic 30.0%
CTTTACTTCATGAAAAGGTA+GGG + chr3_2:54104004-54104023 Msa0411710:intron 30.0%
CCCATACTATTCAGTTTATA+TGG + chr3_2:54104078-54104097 Msa0411710:intron 30.0%
!! GCAATTTTGTTATGCATATC+AGG + chr3_2:54104115-54104134 Msa0411710:intron 30.0%
GTGATGTATCTATTGTATCT+TGG + chr3_2:54104228-54104247 Msa0411710:CDS 30.0%
ATAATTGAACACATTCCAAC+AGG - chr3_2:54104313-54104332 None:intergenic 30.0%
! ATTATTATCTCTGATTGGCT+TGG + chr3_2:54104328-54104347 Msa0411710:intron 30.0%
!! TTATTATCTCTGATTGGCTT+GGG + chr3_2:54104329-54104348 Msa0411710:intron 30.0%
!! AGATGAGGGATTTTAATGTA+GGG + chr3_2:54104429-54104448 Msa0411710:intron 30.0%
! TACATTGTGATATTTTCCGA+AGG - chr3_2:54104478-54104497 None:intergenic 30.0%
GACCAATATACTACATGTTA+AGG - chr3_2:54104514-54104533 None:intergenic 30.0%
TTTAATGCTTGGCTGAAATA+AGG - chr3_2:54104536-54104555 None:intergenic 30.0%
CTGAACTTCAATTTAATGCT+TGG - chr3_2:54104547-54104566 None:intergenic 30.0%
GTCAATTACATATACACAAC+AGG - chr3_2:54104570-54104589 None:intergenic 30.0%
AAATGAAGTGATTCTCTTGA+TGG - chr3_2:54104592-54104611 None:intergenic 30.0%
! TTTACATGGACTTTTGACAT+TGG + chr3_2:54104628-54104647 Msa0411710:CDS 30.0%
! TGATAAACTTGCTCAAAGAT+GGG - chr3_2:54104806-54104825 None:intergenic 30.0%
TGATGACATGCAATAAAAGA+CGG - chr3_2:54104886-54104905 None:intergenic 30.0%
TTGAACTCTTCTGATACAAT+TGG + chr3_2:54104962-54104981 Msa0411710:three_prime_UTR 30.0%
TAAACTGTCAAATATTCAGC+TGG + chr3_2:54105036-54105055 Msa0411710:three_prime_UTR 30.0%
ATCTATCTGATTGAGGAAGA+AGG - chr3_2:54096572-54096591 None:intergenic 35.0%
! AGATTTGGGGAATTTTGTGA+AGG - chr3_2:54096645-54096664 None:intergenic 35.0%
! AGAAAGTGTGCATATCGAAA+GGG - chr3_2:54096761-54096780 None:intergenic 35.0%
! AAGAAAGTGTGCATATCGAA+AGG - chr3_2:54096762-54096781 None:intergenic 35.0%
AAATGTTAGGGTTAGGGTTA+GGG - chr3_2:54096803-54096822 None:intergenic 35.0%
GGAATTGGGAAGAAATGTTA+GGG - chr3_2:54096815-54096834 None:intergenic 35.0%
! TATTGTTGTTGTGAGGGAAA+GGG - chr3_2:54096884-54096903 None:intergenic 35.0%
! TTATTGTTGTTGTGAGGGAA+AGG - chr3_2:54096885-54096904 None:intergenic 35.0%
! GGTAGTTATTGTTGTTGTGA+GGG - chr3_2:54096890-54096909 None:intergenic 35.0%
!!! AATTGGTCTGGTTTTGTTGA+TGG - chr3_2:54096968-54096987 None:intergenic 35.0%
GTTGAATTGGAAAATTGGTC+TGG - chr3_2:54096980-54096999 None:intergenic 35.0%
! ACGGTGTTGAATTGGAAAAT+TGG - chr3_2:54096985-54097004 None:intergenic 35.0%
! GAAATTGAACGGTGTTGAAT+TGG - chr3_2:54096993-54097012 None:intergenic 35.0%
GTGTAGGGAATGAAATTGAA+CGG - chr3_2:54097004-54097023 None:intergenic 35.0%
TGATCATGTTGTGTATGATG+TGG + chr3_2:54097265-54097284 Msa0411710:CDS 35.0%
TTGTGTATGATGTGGATGTT+AGG + chr3_2:54097273-54097292 Msa0411710:CDS 35.0%
TCCGATCCATATTTCGTAAT+CGG - chr3_2:54097335-54097354 None:intergenic 35.0%
! TTTGTTATGGGTTGAAACAG+GGG + chr3_2:54097402-54097421 Msa0411710:CDS 35.0%
CTGTTAGATCTTTGCTTAGA+GGG + chr3_2:54097453-54097472 Msa0411710:CDS 35.0%
! TTATGAATGTTTGCTCTAGG+TGG + chr3_2:54097801-54097820 Msa0411710:intron 35.0%
CGCTCGAGAAAATAATAAAG+TGG - chr3_2:54098010-54098029 None:intergenic 35.0%
! CACATGATAGATTTTTCCTC+TGG + chr3_2:54098080-54098099 Msa0411710:intron 35.0%
CAATTTGATCGCATTAGAGT+TGG - chr3_2:54098267-54098286 None:intergenic 35.0%
TTGAACATCCTCAAATTTGC+TGG + chr3_2:54098624-54098643 Msa0411710:CDS 35.0%
AGAATTGACACCACAAAAGT+TGG + chr3_2:54098801-54098820 Msa0411710:CDS 35.0%
! TTCACCATTTCCAACTTTTG+TGG - chr3_2:54098814-54098833 None:intergenic 35.0%
AACTTGTAGGAACACATGAT+GGG + chr3_2:54098892-54098911 Msa0411710:CDS 35.0%
CACTAGAAAGATAACAATGG+AGG + chr3_2:54099214-54099233 Msa0411710:intron 35.0%
GACTTAATGGCAGAAAAACT+AGG + chr3_2:54099257-54099276 Msa0411710:intron 35.0%
TAATGGCAGAAAAACTAGGA+AGG + chr3_2:54099261-54099280 Msa0411710:intron 35.0%
GTGGGAAACAAATATGAATC+TGG + chr3_2:54099290-54099309 Msa0411710:intron 35.0%
CAGGATATAAGCATGCATAA+GGG - chr3_2:54099470-54099489 None:intergenic 35.0%
ACAGGATATAAGCATGCATA+AGG - chr3_2:54099471-54099490 None:intergenic 35.0%
GTGATAAGGACAATATGATC+AGG - chr3_2:54099661-54099680 None:intergenic 35.0%
AACAAGTATCACGAGAATAG+TGG - chr3_2:54099911-54099930 None:intergenic 35.0%
TCCATGTTTCAGTATTGCTT+GGG - chr3_2:54100019-54100038 None:intergenic 35.0%
TTCCATGTTTCAGTATTGCT+TGG - chr3_2:54100020-54100039 None:intergenic 35.0%
AAGAATGCATCCTTAAGAGA+CGG - chr3_2:54100080-54100099 None:intergenic 35.0%
AGCATATATAGCATTCCTCT+GGG - chr3_2:54100153-54100172 None:intergenic 35.0%
TGCTATATATGCTGTGCATT+TGG + chr3_2:54100160-54100179 Msa0411710:CDS 35.0%
! TATGCTGTGCATTTGGAATA+TGG + chr3_2:54100167-54100186 Msa0411710:CDS 35.0%
!! ATAATCCATGCGAGTTGATT+CGG - chr3_2:54100201-54100220 None:intergenic 35.0%
AGTAAAACTAAGAATGGGCA+TGG - chr3_2:54100243-54100262 None:intergenic 35.0%
!!! ATGCCCATTCTTAGTTTTAC+TGG + chr3_2:54100242-54100261 Msa0411710:CDS 35.0%
! ACAAGTGATATTTTGCCTCA+TGG + chr3_2:54100266-54100285 Msa0411710:CDS 35.0%
! CAAGTGATATTTTGCCTCAT+GGG + chr3_2:54100267-54100286 Msa0411710:CDS 35.0%
! AAGTGATATTTTGCCTCATG+GGG + chr3_2:54100268-54100287 Msa0411710:CDS 35.0%
! CTTGCTTGCATCATTGTTTT+GGG - chr3_2:54100503-54100522 None:intergenic 35.0%
! ACTTGCTTGCATCATTGTTT+TGG - chr3_2:54100504-54100523 None:intergenic 35.0%
!! CTGCTGATTTGTCTAGAAAT+AGG - chr3_2:54100584-54100603 None:intergenic 35.0%
TGAAGCTAAAACTGTTACAC+TGG + chr3_2:54100613-54100632 Msa0411710:CDS 35.0%
ATATCAGCATCACTACTAGA+AGG - chr3_2:54100641-54100660 None:intergenic 35.0%
TGATCACTCAAGTTAGATTG+TGG - chr3_2:54100734-54100753 None:intergenic 35.0%
TCTAACTTGAGTGATCATGT+TGG + chr3_2:54100737-54100756 Msa0411710:CDS 35.0%
CTAACTTGAGTGATCATGTT+GGG + chr3_2:54100738-54100757 Msa0411710:CDS 35.0%
TAACTTGAGTGATCATGTTG+GGG + chr3_2:54100739-54100758 Msa0411710:CDS 35.0%
GACAAATGGATACAATTCAC+AGG + chr3_2:54100792-54100811 Msa0411710:CDS 35.0%
GGTTGCTTAAAAATGACAGA+AGG - chr3_2:54100899-54100918 None:intergenic 35.0%
! TTTTAAGCAACCAACTCATC+TGG + chr3_2:54100907-54100926 Msa0411710:CDS 35.0%
TACCACTTTCACTTCTACTT+CGG - chr3_2:54101041-54101060 None:intergenic 35.0%
ATCAAAATGATGAACTTGGC+AGG + chr3_2:54101077-54101096 Msa0411710:CDS 35.0%
TTTCTTTGCCATCAGAAACT+GGG - chr3_2:54101120-54101139 None:intergenic 35.0%
! TTTTCTTTGCCATCAGAAAC+TGG - chr3_2:54101121-54101140 None:intergenic 35.0%
! ACCTTTTCATGGACATCTTT+TGG - chr3_2:54101310-54101329 None:intergenic 35.0%
TACCATTGATGTAGATGAGT+CGG - chr3_2:54101335-54101354 None:intergenic 35.0%
TTTGTATTAGATGCAGGTGA+TGG - chr3_2:54101364-54101383 None:intergenic 35.0%
TCACCTGCATCTAATACAAA+AGG + chr3_2:54101364-54101383 Msa0411710:CDS 35.0%
CACCTGCATCTAATACAAAA+GGG + chr3_2:54101365-54101384 Msa0411710:CDS 35.0%
! TTCCCTTTTGTATTAGATGC+AGG - chr3_2:54101370-54101389 None:intergenic 35.0%
TACAAAAGGGAAGAGACAAA+AGG + chr3_2:54101378-54101397 Msa0411710:CDS 35.0%
ACAAAAGGGAAGAGACAAAA+GGG + chr3_2:54101379-54101398 Msa0411710:CDS 35.0%
! ATTTGGTTCATTGGACGAAT+CGG - chr3_2:54101461-54101480 None:intergenic 35.0%
!!! GGATTGCTATTTTCAGTACA+TGG - chr3_2:54101499-54101518 None:intergenic 35.0%
AATGCAAGATTCACTCAATC+AGG + chr3_2:54101531-54101550 Msa0411710:CDS 35.0%
TTCCCATCGATGTATTCTTA+AGG + chr3_2:54101724-54101743 Msa0411710:intron 35.0%
GTCCTTAAGAATACATCGAT+GGG - chr3_2:54101729-54101748 None:intergenic 35.0%
AGTCCTTAAGAATACATCGA+TGG - chr3_2:54101730-54101749 None:intergenic 35.0%
CGTTTAAAGAGAAAAATGGG+AGG - chr3_2:54101773-54101792 None:intergenic 35.0%
GCAGTTATTGACAATGCAAA+AGG + chr3_2:54102023-54102042 Msa0411710:intron 35.0%
GCAGAAACAAATGACAATGA+CGG + chr3_2:54102050-54102069 Msa0411710:CDS 35.0%
AACAGTTCCAGTTACAAAAG+AGG + chr3_2:54102074-54102093 Msa0411710:CDS 35.0%
ACAGTTCCAGTTACAAAAGA+GGG + chr3_2:54102075-54102094 Msa0411710:CDS 35.0%
AACCTGTAACATGTTGGAAA+CGG - chr3_2:54102218-54102237 None:intergenic 35.0%
GATTACCAACTTCATGAACA+AGG + chr3_2:54102239-54102258 Msa0411710:CDS 35.0%
TAGATCCTTGTTCATGAAGT+TGG - chr3_2:54102247-54102266 None:intergenic 35.0%
AGATAATGTACAAACCTGGA+AGG - chr3_2:54102382-54102401 None:intergenic 35.0%
ATACAATGATGTTGTCTTGC+TGG + chr3_2:54102466-54102485 Msa0411710:intron 35.0%
TACAATGATGTTGTCTTGCT+GGG + chr3_2:54102467-54102486 Msa0411710:intron 35.0%
!! TTGCTATTTGTGATTTCACG+AGG + chr3_2:54102703-54102722 Msa0411710:intron 35.0%
! AGAATCAACTTGCTCAAACA+TGG - chr3_2:54102828-54102847 None:intergenic 35.0%
! GTTGATTCTACATTCCAGAA+AGG + chr3_2:54102839-54102858 Msa0411710:CDS 35.0%
ACAGAGTATGCTTGTTCATT+TGG + chr3_2:54102942-54102961 Msa0411710:intron 35.0%
CAGAGTATGCTTGTTCATTT+GGG + chr3_2:54102943-54102962 Msa0411710:intron 35.0%
AGAGTATGCTTGTTCATTTG+GGG + chr3_2:54102944-54102963 Msa0411710:intron 35.0%
! AGTAATTTGAGACATTTGGC+AGG - chr3_2:54103149-54103168 None:intergenic 35.0%
ATGTCTCAAATTACTTGCAG+GGG + chr3_2:54103154-54103173 Msa0411710:intron 35.0%
AGTAGAGAGACAGAAAACAT+GGG - chr3_2:54103213-54103232 None:intergenic 35.0%
CTACAGTGAAAGAGAAAACA+TGG + chr3_2:54103245-54103264 Msa0411710:intron 35.0%
ACAGTGAAAGAGAAAACATG+GGG + chr3_2:54103247-54103266 Msa0411710:intron 35.0%
GGGTATCACATATTGGAAAT+GGG - chr3_2:54103468-54103487 None:intergenic 35.0%
TGGGTATCACATATTGGAAA+TGG - chr3_2:54103469-54103488 None:intergenic 35.0%
!! TTATTGGCTCAAATCAAGGT+GGG - chr3_2:54103488-54103507 None:intergenic 35.0%
!! ATTATTGGCTCAAATCAAGG+TGG - chr3_2:54103489-54103508 None:intergenic 35.0%
! CTAGATAAAGCTTTTGGACA+TGG + chr3_2:54103772-54103791 Msa0411710:intron 35.0%
!!! TTCTTCGTGATGTTTTTTGC+AGG + chr3_2:54103840-54103859 Msa0411710:intron 35.0%
! CCTACCTTTTCATGAAGTAA+AGG - chr3_2:54104006-54104025 None:intergenic 35.0%
CCTTTACTTCATGAAAAGGT+AGG + chr3_2:54104003-54104022 Msa0411710:intron 35.0%
! TTGTTATGCATATCAGGTTG+AGG + chr3_2:54104121-54104140 Msa0411710:intron 35.0%
!! GAGATGAGGGATTTTAATGT+AGG + chr3_2:54104428-54104447 Msa0411710:intron 35.0%
ATTGTTATCATGGGATCTGA+GGG - chr3_2:54104773-54104792 None:intergenic 35.0%
! CTGATAAACTTGCTCAAAGA+TGG - chr3_2:54104807-54104826 None:intergenic 35.0%
GATGACATGCAATAAAAGAC+GGG - chr3_2:54104885-54104904 None:intergenic 35.0%
GTACAAAGTTGTGAGTTTCA+TGG + chr3_2:54104991-54105010 Msa0411710:three_prime_UTR 35.0%
AAGTTGTGAGTTTCATGGAT+AGG + chr3_2:54104996-54105015 Msa0411710:three_prime_UTR 35.0%
AGTTGTGAGTTTCATGGATA+GGG + chr3_2:54104997-54105016 Msa0411710:three_prime_UTR 35.0%
TTCATGGATAGGGTCAAAAT+CGG + chr3_2:54105007-54105026 Msa0411710:three_prime_UTR 35.0%
CTCAATTTAGACACTGTATC+TGG + chr3_2:54105076-54105095 Msa0411710:three_prime_UTR 35.0%
TGTTGACGATTAGGATAAAC+TGG + chr3_2:54105129-54105148 Msa0411710:three_prime_UTR 35.0%
TTAACAACGGTTGCAACTAT+TGG + chr3_2:54105171-54105190 Msa0411710:three_prime_UTR 35.0%
GGAATTTCAAGACAGTCACT+TGG - chr3_2:54096530-54096549 None:intergenic 40.0%
GTGTGAGATCTATCTGATTG+AGG - chr3_2:54096579-54096598 None:intergenic 40.0%
! GAAAGTGTGCATATCGAAAG+GGG - chr3_2:54096760-54096779 None:intergenic 40.0%
GAAATGTTAGGGTTAGGGTT+AGG - chr3_2:54096804-54096823 None:intergenic 40.0%
GGGAAGAAATGTTAGGGTTA+GGG - chr3_2:54096809-54096828 None:intergenic 40.0%
TGGGAAGAAATGTTAGGGTT+AGG - chr3_2:54096810-54096829 None:intergenic 40.0%
GGGAATTGGGAAGAAATGTT+AGG - chr3_2:54096816-54096835 None:intergenic 40.0%
! GGGTAGTTATTGTTGTTGTG+AGG - chr3_2:54096891-54096910 None:intergenic 40.0%
! TTGTTGTTGTTGGATTGGAG+GGG - chr3_2:54097114-54097133 None:intergenic 40.0%
! GTTGTTGTTGTTGGATTGGA+GGG - chr3_2:54097115-54097134 None:intergenic 40.0%
CCAATCAAATGCCTTCCTTT+CGG - chr3_2:54097245-54097264 None:intergenic 40.0%
GCCGATTACGAAATATGGAT+CGG + chr3_2:54097331-54097350 Msa0411710:CDS 40.0%
ATATGGATCGGATCCTAATC+CGG + chr3_2:54097343-54097362 Msa0411710:CDS 40.0%
GTTGAAACAGGGGAATATCA+GGG + chr3_2:54097412-54097431 Msa0411710:CDS 40.0%
GCTGTTAGATCTTTGCTTAG+AGG + chr3_2:54097452-54097471 Msa0411710:CDS 40.0%
AAGAAGCAAAGAAATGCCAG+AGG - chr3_2:54098099-54098118 None:intergenic 40.0%
TCTGGCATTTCTTTGCTTCT+TGG + chr3_2:54098098-54098117 Msa0411710:intron 40.0%
!! TGGCCTTGTTTGTTTGTCTA+TGG + chr3_2:54098445-54098464 Msa0411710:intron 40.0%
!!! TTTTACAGTGTTGGCACAGA+TGG + chr3_2:54098497-54098516 Msa0411710:intron 40.0%
! GTGGAAAATTTCTGAAGGTC+CGG + chr3_2:54098532-54098551 Msa0411710:CDS 40.0%
TGAGGCTTATCTTCATCATC+CGG - chr3_2:54098554-54098573 None:intergenic 40.0%
GTGGGACAATTACTTGTTTG+TGG - chr3_2:54098655-54098674 None:intergenic 40.0%
GACACCACAAAAGTTGGAAA+TGG + chr3_2:54098807-54098826 Msa0411710:CDS 40.0%
! TTGTCAAGAGGACATTTTGG+AGG - chr3_2:54098855-54098874 None:intergenic 40.0%
! AGCTTGTCAAGAGGACATTT+TGG - chr3_2:54098858-54098877 None:intergenic 40.0%
CTCTTGACAAGCTCATTGAT+GGG + chr3_2:54098865-54098884 Msa0411710:CDS 40.0%
TCTTGACAAGCTCATTGATG+GGG + chr3_2:54098866-54098885 Msa0411710:CDS 40.0%
ATTGATGGGGTTCAACTTGT+AGG + chr3_2:54098879-54098898 Msa0411710:CDS 40.0%
CAACTTGTAGGAACACATGA+TGG + chr3_2:54098891-54098910 Msa0411710:CDS 40.0%
ACTTGTAGGAACACATGATG+GGG + chr3_2:54098893-54098912 Msa0411710:CDS 40.0%
! CTGATTTGTCAATGTGCCAA+TGG + chr3_2:54098922-54098941 Msa0411710:CDS 40.0%
!! CCAATCGATTTGTCATCCAT+TGG - chr3_2:54098941-54098960 None:intergenic 40.0%
CCAATGGATGACAAATCGAT+TGG + chr3_2:54098938-54098957 Msa0411710:CDS 40.0%
GTGGATGAGATTAAATGCAG+TGG + chr3_2:54099099-54099118 Msa0411710:intron 40.0%
AAAACTAGGAAGGACAAGAG+TGG + chr3_2:54099271-54099290 Msa0411710:intron 40.0%
AAACTAGGAAGGACAAGAGT+GGG + chr3_2:54099272-54099291 Msa0411710:intron 40.0%
TAGAAAGGACAAGGTTCTGT+TGG - chr3_2:54099342-54099361 None:intergenic 40.0%
AGAAGACAAACGTGATTAGG+AGG - chr3_2:54099519-54099538 None:intergenic 40.0%
TAAGGACAATATGATCAGGC+TGG - chr3_2:54099657-54099676 None:intergenic 40.0%
ACACACTTACTGCTGTGATA+AGG - chr3_2:54099675-54099694 None:intergenic 40.0%
! TTTTTATAATGCAGCAGGCC+AGG + chr3_2:54099702-54099721 Msa0411710:intron 40.0%
GAAAGACAAATTCAGAGACC+TGG - chr3_2:54099723-54099742 None:intergenic 40.0%
TCCCAAGCAATACTGAAACA+TGG + chr3_2:54100015-54100034 Msa0411710:CDS 40.0%
ATGGAAATGCACTCAGACTT+TGG + chr3_2:54100034-54100053 Msa0411710:CDS 40.0%
! TTTTACTTGCAAATGCCCAG+AGG + chr3_2:54100135-54100154 Msa0411710:CDS 40.0%
CAGCATATATAGCATTCCTC+TGG - chr3_2:54100154-54100173 None:intergenic 40.0%
!! TAATCCATGCGAGTTGATTC+GGG - chr3_2:54100200-54100219 None:intergenic 40.0%
TGAACAATATGTTCCCCATG+AGG - chr3_2:54100284-54100303 None:intergenic 40.0%
TCATGGGGAACATATTGTTC+AGG + chr3_2:54100283-54100302 Msa0411710:CDS 40.0%
GGTTTATTGTGTTCAGACAC+TGG + chr3_2:54100304-54100323 Msa0411710:CDS 40.0%
! TCAGCAGTATGCTTTGGATT+TGG + chr3_2:54100331-54100350 Msa0411710:CDS 40.0%
! TCTAGTCCCGCATTTTCTAA+TGG - chr3_2:54100374-54100393 None:intergenic 40.0%
AATTGCATCTCGTGAAACAC+TGG - chr3_2:54100408-54100427 None:intergenic 40.0%
!!! ATTGTTTTGGGAGCAGAACT+GGG - chr3_2:54100491-54100510 None:intergenic 40.0%
TCAAGATACCCTTTAAGCTC+AGG + chr3_2:54100545-54100564 Msa0411710:CDS 40.0%
CAGTATGACCTGAGCTTAAA+GGG - chr3_2:54100556-54100575 None:intergenic 40.0%
TCAGTATGACCTGAGCTTAA+AGG - chr3_2:54100557-54100576 None:intergenic 40.0%
!! CTGGCTTTTGTAATCTCAGA+TGG - chr3_2:54100938-54100957 None:intergenic 40.0%
!! TTCCTCCTCTGAGACTAATA+TGG + chr3_2:54100958-54100977 Msa0411710:CDS 40.0%
TGAGGTAGAAACAAAGATCC+AGG + chr3_2:54100994-54101013 Msa0411710:CDS 40.0%
AGAAACAAAGATCCAGGATG+TGG + chr3_2:54101000-54101019 Msa0411710:CDS 40.0%
GAAGTAGAAGTGAAAGTGGT+AGG + chr3_2:54101040-54101059 Msa0411710:CDS 40.0%
! TTCTGATCTTGGCATTGAGA+TGG + chr3_2:54101159-54101178 Msa0411710:CDS 40.0%
ACTTACATTACAGAGGAACC+TGG + chr3_2:54101211-54101230 Msa0411710:CDS 40.0%
!! GACAAGTTGATTCTACTGGA+GGG + chr3_2:54101233-54101252 Msa0411710:CDS 40.0%
!! ACAAGTTGATTCTACTGGAG+GGG + chr3_2:54101234-54101253 Msa0411710:CDS 40.0%
GCCAAAAGATGTCCATGAAA+AGG + chr3_2:54101306-54101325 Msa0411710:CDS 40.0%
! ATGAGTCGGAAACCTTTTCA+TGG - chr3_2:54101321-54101340 None:intergenic 40.0%
TTCCGACTCATCTACATCAA+TGG + chr3_2:54101330-54101349 Msa0411710:CDS 40.0%
GATTCGTCCAATGAACCAAA+TGG + chr3_2:54101460-54101479 Msa0411710:CDS 40.0%
! GGGAGGTTTGAAATTCCATT+TGG - chr3_2:54101478-54101497 None:intergenic 40.0%
!!! TGCTATTTTCAGTACATGGG+AGG - chr3_2:54101495-54101514 None:intergenic 40.0%
ACTCAATCAGGTGATTACTC+AGG + chr3_2:54101543-54101562 Msa0411710:intron 40.0%
! CTTCTACCCTCTTTTGTAAC+TGG - chr3_2:54102084-54102103 None:intergenic 40.0%
CAGTTACAAAAGAGGGTAGA+AGG + chr3_2:54102082-54102101 Msa0411710:CDS 40.0%
! TTTTTCCATGCTTCTCCCTA+GGG - chr3_2:54102118-54102137 None:intergenic 40.0%
!! TTTGTGGGCTAGAATTCAAG+AGG + chr3_2:54102161-54102180 Msa0411710:CDS 40.0%
TTGTCTTGCTGGGATCTAAT+TGG + chr3_2:54102477-54102496 Msa0411710:intron 40.0%
TTTATGCGATAGAGAGGAGT+GGG + chr3_2:54102503-54102522 Msa0411710:intron 40.0%
GTTTCAGACAACTGTCAAAC+AGG + chr3_2:54102604-54102623 Msa0411710:CDS 40.0%
!!! ATCCAGTTTTGAAACGACAG+TGG + chr3_2:54102775-54102794 Msa0411710:CDS 40.0%
TTCTACATTCCAGAAAGGCA+TGG + chr3_2:54102844-54102863 Msa0411710:CDS 40.0%
TTCGTTGGCAATGACTCTAA+GGG + chr3_2:54102913-54102932 Msa0411710:CDS 40.0%
!!! TTTTGGCTTAATGTGGGCTA+GGG + chr3_2:54103082-54103101 Msa0411710:intron 40.0%
CAAATTACTTGCAGGGGATT+TGG + chr3_2:54103160-54103179 Msa0411710:intron 40.0%
GAGTAGAGAGACAGAAAACA+TGG - chr3_2:54103214-54103233 None:intergenic 40.0%
CTGTCTCTCTACTCTATGTA+TGG + chr3_2:54103220-54103239 Msa0411710:intron 40.0%
TATCCTCCTTGGAACAATAG+TGG + chr3_2:54103273-54103292 Msa0411710:intron 40.0%
TCAGATCCACTATTGTTCCA+AGG - chr3_2:54103282-54103301 None:intergenic 40.0%
!! ATAGTGGATCTGAATCCACT+CGG + chr3_2:54103289-54103308 Msa0411710:intron 40.0%
TATTCCACAAGAGTAATGCC+AGG + chr3_2:54103362-54103381 Msa0411710:intron 40.0%
ATTCCACAAGAGTAATGCCA+GGG + chr3_2:54103363-54103382 Msa0411710:intron 40.0%
!! ATATGTCCCACCACTTTTAG+TGG + chr3_2:54103440-54103459 Msa0411710:intron 40.0%
! GAAATGGGTTCCACTAAAAG+TGG - chr3_2:54103453-54103472 None:intergenic 40.0%
TCAAGGTGGGTATCACATAT+TGG - chr3_2:54103475-54103494 None:intergenic 40.0%
TTGGACATGGCACTCTTATA+TGG + chr3_2:54103785-54103804 Msa0411710:intron 40.0%
ACATTGAGATACGGAGACAT+TGG - chr3_2:54103815-54103834 None:intergenic 40.0%
ATGTCTCCGTATCTCAATGT+TGG + chr3_2:54103815-54103834 Msa0411710:intron 40.0%
CGGTCCTTTACTTCATGAAA+AGG + chr3_2:54103999-54104018 Msa0411710:CDS 40.0%
TCATGAAAAGGTAGGGAACT+TGG + chr3_2:54104011-54104030 Msa0411710:intron 40.0%
GAACTTGGCTAACTACTTGT+TGG + chr3_2:54104026-54104045 Msa0411710:intron 40.0%
!! TGTTGGTCTTTGTTGTCGAT+AGG + chr3_2:54104043-54104062 Msa0411710:intron 40.0%
! TAGCAAGGTTGATTTCTGAG+CGG + chr3_2:54104168-54104187 Msa0411710:CDS 40.0%
GATTTCTGAGCGGAAATATG+AGG + chr3_2:54104178-54104197 Msa0411710:CDS 40.0%
TGTATCTTGGTTATGCTCTC+AGG + chr3_2:54104241-54104260 Msa0411710:CDS 40.0%
! GGTGTGTTTGGTTCAAACAA+GGG + chr3_2:54104350-54104369 Msa0411710:intron 40.0%
! TGTTTGGTTCAAACAAGGGA+CGG + chr3_2:54104354-54104373 Msa0411710:intron 40.0%
! ACGGGTTTTTAATGTAGCAG+AGG + chr3_2:54104373-54104392 Msa0411710:intron 40.0%
! CGGGTTTTTAATGTAGCAGA+GGG + chr3_2:54104374-54104393 Msa0411710:intron 40.0%
! GGGTTTTTAATGTAGCAGAG+GGG + chr3_2:54104375-54104394 Msa0411710:intron 40.0%
TTTAATGTAGCAGAGGGGTA+AGG + chr3_2:54104380-54104399 Msa0411710:intron 40.0%
CATTGTTATCATGGGATCTG+AGG - chr3_2:54104774-54104793 None:intergenic 40.0%
TAGAAGGCAAGTTACGTTGA+TGG - chr3_2:54104838-54104857 None:intergenic 40.0%
AGATCAGATCCAGTGATAGA+AGG - chr3_2:54104854-54104873 None:intergenic 40.0%
TCATTTACATGTCGTCAGCA+TGG - chr3_2:54104912-54104931 None:intergenic 40.0%
GTTGACGCATGTCAAAAGTA+AGG - chr3_2:54105108-54105127 None:intergenic 40.0%
TGACGATTAGGATAAACTGG+AGG + chr3_2:54105132-54105151 Msa0411710:three_prime_UTR 40.0%
TCAAGACAGTCACTTGGAAG+CGG - chr3_2:54096524-54096543 None:intergenic 45.0%
AGGAAGAAGGTGAAGTGATG+CGG - chr3_2:54096559-54096578 None:intergenic 45.0%
ATATCGAAAGGGGTTGGAGA+AGG - chr3_2:54096750-54096769 None:intergenic 45.0%
TAGGGTTAGGGTTAGGGTTT+GGG - chr3_2:54096791-54096810 None:intergenic 45.0%
TTAGGGTTAGGGTTAGGGTT+TGG - chr3_2:54096792-54096811 None:intergenic 45.0%
TAGGGTTAGGGTTAGGGTTA+GGG - chr3_2:54096797-54096816 None:intergenic 45.0%
TTAGGGTTAGGGTTAGGGTT+AGG - chr3_2:54096792-54096811 None:intergenic 45.0%
TAAGAGGAGGATGAAGAAGG+TGG - chr3_2:54096861-54096880 None:intergenic 45.0%
TTGTTGAGGTGGTTGAAGAG+GGG - chr3_2:54097027-54097046 None:intergenic 45.0%
GTTGTTGAGGTGGTTGAAGA+GGG - chr3_2:54097028-54097047 None:intergenic 45.0%
ATTGGTTGAGGTTGTTGAGG+TGG - chr3_2:54097038-54097057 None:intergenic 45.0%
CGTTAGGATTTGAAGGAGGT+GGG - chr3_2:54097061-54097080 None:intergenic 45.0%
! GGTTGTTGTTGTTGGATTGG+AGG - chr3_2:54097116-54097135 None:intergenic 45.0%
! GGTGGTTGTTGTTGTTGGAT+TGG - chr3_2:54097119-54097138 None:intergenic 45.0%
CCTTTCGGCACTTTACTACT+CGG - chr3_2:54097230-54097249 None:intergenic 45.0%
!! GTAGTAAAGTGCCGAAAGGA+AGG + chr3_2:54097231-54097250 Msa0411710:CDS 45.0%
!! CCGAAAGGAAGGCATTTGAT+TGG + chr3_2:54097242-54097261 Msa0411710:CDS 45.0%
!! GTTGCGCCGATTACGAAATA+TGG + chr3_2:54097326-54097345 Msa0411710:CDS 45.0%
! ATCGGATCCTAATCCGGTTT+TGG + chr3_2:54097349-54097368 Msa0411710:CDS 45.0%
! TCGGATCCTAATCCGGTTTT+GGG + chr3_2:54097350-54097369 Msa0411710:CDS 45.0%
GGTTGAAACAGGGGAATATC+AGG + chr3_2:54097411-54097430 Msa0411710:CDS 45.0%
TGCTGAAGATGTTCATCTCC+TGG + chr3_2:54098390-54098409 Msa0411710:CDS 45.0%
AAGATGTTCATCTCCTGGCT+AGG + chr3_2:54098395-54098414 Msa0411710:CDS 45.0%
TGCTGTTCAAATAGTCGGAG+AGG + chr3_2:54098595-54098614 Msa0411710:CDS 45.0%
TGGAAATGGTGAAGCCTTTG+TGG + chr3_2:54098821-54098840 Msa0411710:CDS 45.0%
CCATCAATGAGCTTGTCAAG+AGG - chr3_2:54098867-54098886 None:intergenic 45.0%
CCTCTTGACAAGCTCATTGA+TGG + chr3_2:54098864-54098883 Msa0411710:CDS 45.0%
TCGATTGGTATCAGCATCAC+AGG + chr3_2:54098953-54098972 Msa0411710:CDS 45.0%
TTGGTATCAGCATCACAGGA+TGG + chr3_2:54098957-54098976 Msa0411710:CDS 45.0%
CTGTGTTCAGACCTCATGAT+GGG + chr3_2:54099593-54099612 Msa0411710:CDS 45.0%
AAAACAGGATGCCCATCATG+AGG - chr3_2:54099607-54099626 None:intergenic 45.0%
ACAATATGATCAGGCTGGTG+TGG - chr3_2:54099652-54099671 None:intergenic 45.0%
!! AATTGCACTACGCTGACTTC+AGG - chr3_2:54099745-54099764 None:intergenic 45.0%
GTATCACGAGAATAGTGGCA+TGG - chr3_2:54099906-54099925 None:intergenic 45.0%
CCTTGTAGGGACCACAAAAT+CGG + chr3_2:54099949-54099968 Msa0411710:intron 45.0%
CTTGTAGGGACCACAAAATC+GGG + chr3_2:54099950-54099969 Msa0411710:intron 45.0%
! AGCTTCACTTCCCGATTTTG+TGG - chr3_2:54099963-54099982 None:intergenic 45.0%
AAAATCGGGAAGTGAAGCTC+TGG + chr3_2:54099964-54099983 Msa0411710:CDS 45.0%
AAATCGGGAAGTGAAGCTCT+GGG + chr3_2:54099965-54099984 Msa0411710:CDS 45.0%
TCTCAGCTAGTGAAGAAGGT+TGG + chr3_2:54099988-54100007 Msa0411710:CDS 45.0%
TTCAGCTAAGCCGTCTCTTA+AGG + chr3_2:54100067-54100086 Msa0411710:CDS 45.0%
AGTAAAAGCAGACCTGCATG+AGG - chr3_2:54100122-54100141 None:intergenic 45.0%
!! ATGCGAGTTGATTCGGGATT+AGG - chr3_2:54100194-54100213 None:intergenic 45.0%
TAATCCCGAATCAACTCGCA+TGG + chr3_2:54100193-54100212 Msa0411710:CDS 45.0%
GGCTATTCAGCAGTATGCTT+TGG + chr3_2:54100325-54100344 Msa0411710:CDS 45.0%
GCCTCCACCATTAGAAAATG+CGG + chr3_2:54100364-54100383 Msa0411710:CDS 45.0%
CCTCCACCATTAGAAAATGC+GGG + chr3_2:54100365-54100384 Msa0411710:CDS 45.0%
! AGTCCCGCATTTTCTAATGG+TGG - chr3_2:54100371-54100390 None:intergenic 45.0%
CGAGATGCAATTACTGCTGA+AGG + chr3_2:54100416-54100435 Msa0411710:CDS 45.0%
!!! CATTGTTTTGGGAGCAGAAC+TGG - chr3_2:54100492-54100511 None:intergenic 45.0%
AAAGCTTCCTGGACAACCTT+GGG - chr3_2:54100697-54100716 None:intergenic 45.0%
CCTGAAATCAGAAAGCTTCC+TGG - chr3_2:54100708-54100727 None:intergenic 45.0%
CCAGGAAGCTTTCTGATTTC+AGG + chr3_2:54100705-54100724 Msa0411710:CDS 45.0%
GATGGTGTAACCAGATGAGT+TGG - chr3_2:54100920-54100939 None:intergenic 45.0%
! ATTAGTCTCAGAGGAGGAAC+TGG - chr3_2:54100957-54100976 None:intergenic 45.0%
! GACCATATTAGTCTCAGAGG+AGG - chr3_2:54100963-54100982 None:intergenic 45.0%
! GTCGACCATATTAGTCTCAG+AGG - chr3_2:54100966-54100985 None:intergenic 45.0%
! ATCCAGGATGTGGTTGATGT+GGG + chr3_2:54101010-54101029 Msa0411710:CDS 45.0%
TGCCGAAGTAGAAGTGAAAG+TGG + chr3_2:54101036-54101055 Msa0411710:CDS 45.0%
TGAAAGTGGTAGGTGAAGCA+AGG + chr3_2:54101050-54101069 Msa0411710:CDS 45.0%
AAATGATGAACTTGGCAGGC+AGG + chr3_2:54101081-54101100 Msa0411710:CDS 45.0%
AATGATGAACTTGGCAGGCA+GGG + chr3_2:54101082-54101101 Msa0411710:CDS 45.0%
!! TCAGAAACTGGGTTTTGTGG+TGG - chr3_2:54101109-54101128 None:intergenic 45.0%
! CCATCAGAAACTGGGTTTTG+TGG - chr3_2:54101112-54101131 None:intergenic 45.0%
CCACAAAACCCAGTTTCTGA+TGG + chr3_2:54101109-54101128 Msa0411710:CDS 45.0%
TGGGGAGACTTACATTACAG+AGG + chr3_2:54101204-54101223 Msa0411710:CDS 45.0%
CCAGTAGAATCAACTTGTCC+AGG - chr3_2:54101232-54101251 None:intergenic 45.0%
!! CCTGGACAAGTTGATTCTAC+TGG + chr3_2:54101229-54101248 Msa0411710:CDS 45.0%
!! GGACAAGTTGATTCTACTGG+AGG + chr3_2:54101232-54101251 Msa0411710:CDS 45.0%
! GTATTAGATGCAGGTGATGG+TGG - chr3_2:54101361-54101380 None:intergenic 45.0%
GGTAAGAACTCTCAACCATC+AGG + chr3_2:54101400-54101419 Msa0411710:CDS 45.0%
AATTGCATGCACTAGGAGAC+GGG - chr3_2:54101435-54101454 None:intergenic 45.0%
GAATTGCATGCACTAGGAGA+CGG - chr3_2:54101436-54101455 None:intergenic 45.0%
TCGGTTGAATTGCATGCACT+AGG - chr3_2:54101442-54101461 None:intergenic 45.0%
TCTTGCATTGCCGCAATTTG+AGG - chr3_2:54101520-54101539 None:intergenic 45.0%
AAAAGAGGGTAGAAGGCTTG+AGG + chr3_2:54102089-54102108 Msa0411710:CDS 45.0%
! CTTTTTCCATGCTTCTCCCT+AGG - chr3_2:54102119-54102138 None:intergenic 45.0%
AGTCCAATGCTGATGCTTTG+TGG + chr3_2:54102145-54102164 Msa0411710:CDS 45.0%
GTCCAATGCTGATGCTTTGT+GGG + chr3_2:54102146-54102165 Msa0411710:CDS 45.0%
GACCGTTTCCAACATGTTAC+AGG + chr3_2:54102213-54102232 Msa0411710:CDS 45.0%
! ACAGTTTTCTCCAATGCTGC+TGG - chr3_2:54102270-54102289 None:intergenic 45.0%
TGGCACTTTATGCGATAGAG+AGG + chr3_2:54102497-54102516 Msa0411710:intron 45.0%
CTTTATGCGATAGAGAGGAG+TGG + chr3_2:54102502-54102521 Msa0411710:intron 45.0%
! CAGTTGTCTGAAACTGTGCT+TGG - chr3_2:54102598-54102617 None:intergenic 45.0%
AACTGTCAAACAGGCACTTC+AGG + chr3_2:54102613-54102632 Msa0411710:CDS 45.0%
! GACCACTGTCGTTTCAAAAC+TGG - chr3_2:54102780-54102799 None:intergenic 45.0%
TGCAGGACATCTCAAATGCA+GGG - chr3_2:54102802-54102821 None:intergenic 45.0%
TTGCAGGACATCTCAAATGC+AGG - chr3_2:54102803-54102822 None:intergenic 45.0%
! TTGCTCAAACATGGCTTTGC+AGG - chr3_2:54102819-54102838 None:intergenic 45.0%
AATGTTCAGCCATGCCTTTC+TGG - chr3_2:54102856-54102875 None:intergenic 45.0%
AGAGTCATTGCCAACGAAGT+AGG - chr3_2:54102911-54102930 None:intergenic 45.0%
CTTCGTTGGCAATGACTCTA+AGG + chr3_2:54102912-54102931 Msa0411710:CDS 45.0%
!!! GTTTTGGCTTAATGTGGGCT+AGG + chr3_2:54103081-54103100 Msa0411710:intron 45.0%
GTAACGAAGCTTCTCTGAAC+AGG - chr3_2:54103191-54103210 None:intergenic 45.0%
ACATGGGGATATATCCTCCT+TGG + chr3_2:54103262-54103281 Msa0411710:intron 45.0%
GATCCACTATTGTTCCAAGG+AGG - chr3_2:54103279-54103298 None:intergenic 45.0%
TGGGTTCCACTAAAAGTGGT+GGG - chr3_2:54103449-54103468 None:intergenic 45.0%
ATGGGTTCCACTAAAAGTGG+TGG - chr3_2:54103450-54103469 None:intergenic 45.0%
AATAGATGGTGAGAAGACCC+TGG - chr3_2:54103615-54103634 None:intergenic 45.0%
!! TTGAGTAGAGAAGTGCTCGA+GGG + chr3_2:54103898-54103917 Msa0411710:CDS 45.0%
GCAACCTCAAGAACAAACTC+TGG + chr3_2:54103943-54103962 Msa0411710:CDS 45.0%
! TGTGCCAGAGTTTGTTCTTG+AGG - chr3_2:54103950-54103969 None:intergenic 45.0%
AACCTTGCTAGCTCCTTTGT+GGG - chr3_2:54104158-54104177 None:intergenic 45.0%
TTCTGAGCGGAAATATGAGG+AGG + chr3_2:54104181-54104200 Msa0411710:CDS 45.0%
TACAGACATGTCTCTCCTGT+TGG + chr3_2:54104295-54104314 Msa0411710:intron 45.0%
! GGGTGTGTTTGGTTCAAACA+AGG + chr3_2:54104349-54104368 Msa0411710:intron 45.0%
! GTTTGGTTCAAACAAGGGAC+GGG + chr3_2:54104355-54104374 Msa0411710:intron 45.0%
TCACTTCATTTCTGCTGTGC+AGG + chr3_2:54104601-54104620 Msa0411710:intron 45.0%
!! GCTGTGCAGGTTGATTTACA+TGG + chr3_2:54104614-54104633 Msa0411710:intron 45.0%
AGCACTACACCTTGGCTTAA+GGG - chr3_2:54104662-54104681 None:intergenic 45.0%
AAGCACTACACCTTGGCTTA+AGG - chr3_2:54104663-54104682 None:intergenic 45.0%
!! GAAGTGAAAGCACTACACCT+TGG - chr3_2:54104670-54104689 None:intergenic 45.0%
CGCACGTGCATTGTTATCAT+GGG - chr3_2:54104782-54104801 None:intergenic 45.0%
TCGCACGTGCATTGTTATCA+TGG - chr3_2:54104783-54104802 None:intergenic 45.0%
! CGTAACTTGCCTTCTATCAC+TGG + chr3_2:54104842-54104861 Msa0411710:CDS 45.0%
!! GCGTCAACTTGTTGACGATT+AGG + chr3_2:54105120-54105139 Msa0411710:three_prime_UTR 45.0%
!!! TTTTTTATTTCTTTATATTA+AGG + chr3_2:54101852-54101871 Msa0411710:intron 5.0%
! GGTGAAGTGATGCGGGTTTT+CGG - chr3_2:54096551-54096570 None:intergenic 50.0%
GGAAGAAGGTGAAGTGATGC+GGG - chr3_2:54096558-54096577 None:intergenic 50.0%
! GGAGAAGGTGGTGGTTGATT+GGG - chr3_2:54096735-54096754 None:intergenic 50.0%
! TGGAGAAGGTGGTGGTTGAT+TGG - chr3_2:54096736-54096755 None:intergenic 50.0%
GTGTGCATATCGAAAGGGGT+TGG - chr3_2:54096756-54096775 None:intergenic 50.0%
AGGGTTAGGGTTAGGGTTTG+GGG - chr3_2:54096790-54096809 None:intergenic 50.0%
GGGTAAGAGGAGGATGAAGA+AGG - chr3_2:54096864-54096883 None:intergenic 50.0%
GTTGTGAGGGAAAGGGTAAG+AGG - chr3_2:54096877-54096896 None:intergenic 50.0%
!! GGTGATGGTGGTGATCGTAA+GGG - chr3_2:54096911-54096930 None:intergenic 50.0%
!! TGGTGATGGTGGTGATCGTA+AGG - chr3_2:54096912-54096931 None:intergenic 50.0%
TGTTGAGGTGGTTGAAGAGG+GGG - chr3_2:54097026-54097045 None:intergenic 50.0%
GGTTGTTGAGGTGGTTGAAG+AGG - chr3_2:54097029-54097048 None:intergenic 50.0%
!! GGGATTGGTTGAGGTTGTTG+AGG - chr3_2:54097041-54097060 None:intergenic 50.0%
GGATTTGAAGGAGGTGGGAT+TGG - chr3_2:54097056-54097075 None:intergenic 50.0%
GCGTTAGGATTTGAAGGAGG+TGG - chr3_2:54097062-54097081 None:intergenic 50.0%
CCTCCTTCAAATCCTAACGC+CGG + chr3_2:54097062-54097081 Msa0411710:CDS 50.0%
TTAACAGCGCCAGAGGAGAT+GGG - chr3_2:54097158-54097177 None:intergenic 50.0%
ATTAACAGCGCCAGAGGAGA+TGG - chr3_2:54097159-54097178 None:intergenic 50.0%
!! CCGAGTAGTAAAGTGCCGAA+AGG + chr3_2:54097227-54097246 Msa0411710:CDS 50.0%
! GATGTGGATGTTAGGTTGCC+TGG + chr3_2:54097281-54097300 Msa0411710:CDS 50.0%
TGTCGACCCAAAACCGGATT+AGG - chr3_2:54097359-54097378 None:intergenic 50.0%
GCAATCTGTCGACCCAAAAC+CGG - chr3_2:54097365-54097384 None:intergenic 50.0%
! TTTGCTTAGAGGGCACACTC+AGG + chr3_2:54097463-54097482 Msa0411710:CDS 50.0%
! TTAGAGGGCACACTCAGGTT+TGG + chr3_2:54097468-54097487 Msa0411710:intron 50.0%
TTCTCAGAGGGTCACAGACT+TGG + chr3_2:54098360-54098379 Msa0411710:intron 50.0%
GCAACAGAAACTACCTAGCC+AGG - chr3_2:54098411-54098430 None:intergenic 50.0%
TGGCAGTGCCAGCAAATTTG+AGG - chr3_2:54098635-54098654 None:intergenic 50.0%
TGGAGGATCTTCTGCCACAA+AGG - chr3_2:54098838-54098857 None:intergenic 50.0%
! TGTAGGAACACATGATGGGG+AGG + chr3_2:54098896-54098915 Msa0411710:CDS 50.0%
ATCAGCATCACAGGATGGCA+CGG + chr3_2:54098962-54098981 Msa0411710:CDS 50.0%
TGAGGTCTGAACACAGCAAG+TGG - chr3_2:54099589-54099608 None:intergenic 50.0%
GCTGTGTTCAGACCTCATGA+TGG + chr3_2:54099592-54099611 Msa0411710:CDS 50.0%
! CCGATTTTGTGGTCCCTACA+AGG - chr3_2:54099952-54099971 None:intergenic 50.0%
TGGGTCTCAGCTAGTGAAGA+AGG + chr3_2:54099984-54100003 Msa0411710:CDS 50.0%
GGGCATGGTCACAGTAAACT+CGG - chr3_2:54100228-54100247 None:intergenic 50.0%
! CCCGCATTTTCTAATGGTGG+AGG - chr3_2:54100368-54100387 None:intergenic 50.0%
ACCTGCAGACGAGTCTAAAG+AGG - chr3_2:54100447-54100466 None:intergenic 50.0%
! CAAGCAAGTAGCACTGAGAG+TGG + chr3_2:54100515-54100534 Msa0411710:CDS 50.0%
GAAAGCTTCCTGGACAACCT+TGG - chr3_2:54100698-54100717 None:intergenic 50.0%
TATGGTCGACAGAGTGAGTG+AGG + chr3_2:54100976-54100995 Msa0411710:CDS 50.0%
! GATCCAGGATGTGGTTGATG+TGG + chr3_2:54101009-54101028 Msa0411710:CDS 50.0%
TACCCACATCAACCACATCC+TGG - chr3_2:54101015-54101034 None:intergenic 50.0%
ATGATGAACTTGGCAGGCAG+GGG + chr3_2:54101083-54101102 Msa0411710:CDS 50.0%
TGCTCTCAGGCTTCTGATCT+TGG + chr3_2:54101148-54101167 Msa0411710:CDS 50.0%
GTCTTGAAGTCCATCCTCAC+CGG - chr3_2:54101284-54101303 None:intergenic 50.0%
ATTGCATGCACTAGGAGACG+GGG - chr3_2:54101434-54101453 None:intergenic 50.0%
! AGCCCACAAAGCATCAGCAT+TGG - chr3_2:54102151-54102170 None:intergenic 50.0%
CAAGGATCTACCAGCAGCAT+TGG + chr3_2:54102257-54102276 Msa0411710:CDS 50.0%
TACTATCGCGGAATCCTTCC+AGG + chr3_2:54102365-54102384 Msa0411710:CDS 50.0%
AGCTCGAAGCTACTGTAGCT+AGG + chr3_2:54102567-54102586 Msa0411710:CDS 50.0%
TGCAGCAACGCCTTGAATCT+GGG + chr3_2:54102885-54102904 Msa0411710:CDS 50.0%
ACGAAGTAGGCCCAGATTCA+AGG - chr3_2:54102898-54102917 None:intergenic 50.0%
TGAATCTGGGCCTACTTCGT+TGG + chr3_2:54102898-54102917 Msa0411710:CDS 50.0%
ACGAAGCTTCTCTGAACAGG+AGG - chr3_2:54103188-54103207 None:intergenic 50.0%
TGTCCCTGGCATTACTCTTG+TGG - chr3_2:54103369-54103388 None:intergenic 50.0%
!! GGTGTTGAAAAGAGTGTCCC+TGG - chr3_2:54103383-54103402 None:intergenic 50.0%
TGGCACACTCAACAAAAGGC+GGG - chr3_2:54103595-54103614 None:intergenic 50.0%
CTGGCACACTCAACAAAAGG+CGG - chr3_2:54103596-54103615 None:intergenic 50.0%
! GCCTTTTGTTGAGTGTGCCA+GGG + chr3_2:54103595-54103614 Msa0411710:intron 50.0%
ACCCTGGCACACTCAACAAA+AGG - chr3_2:54103599-54103618 None:intergenic 50.0%
CTCGAGCACTTCTCTACTCA+AGG - chr3_2:54103899-54103918 None:intergenic 50.0%
!! CTTGAGTAGAGAAGTGCTCG+AGG + chr3_2:54103897-54103916 Msa0411710:CDS 50.0%
CGAGGGTCAGAGAAAGCTAA+TGG + chr3_2:54103915-54103934 Msa0411710:CDS 50.0%
GTAAAGGACCGTTGTTCAGC+TGG - chr3_2:54103990-54104009 None:intergenic 50.0%
AGCTCCTTTGTGGGATCTAG+TGG - chr3_2:54104149-54104168 None:intergenic 50.0%
ATCCCACAAAGGAGCTAGCA+AGG + chr3_2:54104153-54104172 Msa0411710:CDS 50.0%
CAACCTTGCTAGCTCCTTTG+TGG - chr3_2:54104159-54104178 None:intergenic 50.0%
!! CTGATTGGCTTGGGTGTGTT+TGG + chr3_2:54104338-54104357 Msa0411710:intron 50.0%
GTTCCTCTTCCCTTAAGCCA+AGG + chr3_2:54104650-54104669 Msa0411710:CDS 50.0%
ACACCTTGGCTTAAGGGAAG+AGG - chr3_2:54104656-54104675 None:intergenic 50.0%
TGTCATCCACGAGAGCTTTC+GGG - chr3_2:54104729-54104748 None:intergenic 50.0%
CTGTCATCCACGAGAGCTTT+CGG - chr3_2:54104730-54104749 None:intergenic 50.0%
AAAGGGGTTGGAGAAGGTGG+TGG - chr3_2:54096744-54096763 None:intergenic 55.0%
TCGAAAGGGGTTGGAGAAGG+TGG - chr3_2:54096747-54096766 None:intergenic 55.0%
GGGTTAGGGTTAGGGTTTGG+GGG - chr3_2:54096789-54096808 None:intergenic 55.0%
AGGAGCGGAGGAAGGGAATT+GGG - chr3_2:54096829-54096848 None:intergenic 55.0%
AAGGAGCGGAGGAAGGGAAT+TGG - chr3_2:54096830-54096849 None:intergenic 55.0%
! GAGGATGAAGAAGGTGGTGG+CGG - chr3_2:54096855-54096874 None:intergenic 55.0%
GAGGAGGATGAAGAAGGTGG+TGG - chr3_2:54096858-54096877 None:intergenic 55.0%
GTGAGGGAAAGGGTAAGAGG+AGG - chr3_2:54096874-54096893 None:intergenic 55.0%
!! GAAGCTGAAGCTGGTGATGG+TGG - chr3_2:54096923-54096942 None:intergenic 55.0%
GCTGAAGCTGAAGCTGGTGA+TGG - chr3_2:54096926-54096945 None:intergenic 55.0%
GCTGATGCTGAAGCTGAAGC+TGG - chr3_2:54096932-54096951 None:intergenic 55.0%
! GTGGTTGAAGAGGGGGTGTA+GGG - chr3_2:54097019-54097038 None:intergenic 55.0%
!! GAAGGAGGTGGGATTGGTTG+AGG - chr3_2:54097050-54097069 None:intergenic 55.0%
CCGGCGTTAGGATTTGAAGG+AGG - chr3_2:54097065-54097084 None:intergenic 55.0%
! GCACCGGCGTTAGGATTTGA+AGG - chr3_2:54097068-54097087 None:intergenic 55.0%
TGCTGAGGAGAGCCATGAGA+CGG - chr3_2:54097091-54097110 None:intergenic 55.0%
! GCGGTGGTGGTTGTTGTTGT+TGG - chr3_2:54097124-54097143 None:intergenic 55.0%
!! GAGATGGGCTGTGATTGTGG+CGG - chr3_2:54097143-54097162 None:intergenic 55.0%
!! GAGGAGATGGGCTGTGATTG+TGG - chr3_2:54097146-54097165 None:intergenic 55.0%
CAATCACAGCCCATCTCCTC+TGG + chr3_2:54097146-54097165 Msa0411710:CDS 55.0%
CTCCTCTGGCGCTGTTAATC+CGG + chr3_2:54097160-54097179 Msa0411710:CDS 55.0%
! GCATTGGCAGCAGTTATCGC+CGG - chr3_2:54097182-54097201 None:intergenic 55.0%
TGAAGTGCAGCCTCAGCTTG+AGG + chr3_2:54097304-54097323 Msa0411710:CDS 55.0%
CAGATGGCCGTGTCTTTGTG+TGG + chr3_2:54098513-54098532 Msa0411710:CDS 55.0%
GTTGCAGCATTGCCTCATGC+AGG + chr3_2:54100107-54100126 Msa0411710:CDS 55.0%
GCCTCTTTAGACTCGTCTGC+AGG + chr3_2:54100443-54100462 Msa0411710:CDS 55.0%
CTCAAAGGAGGAGGTGGAGA+AGG - chr3_2:54100674-54100693 None:intergenic 55.0%
AACCTTGGGCTCAAAGGAGG+AGG - chr3_2:54100683-54100702 None:intergenic 55.0%
GACAACCTTGGGCTCAAAGG+AGG - chr3_2:54100686-54100705 None:intergenic 55.0%
CTGGACAACCTTGGGCTCAA+AGG - chr3_2:54100689-54100708 None:intergenic 55.0%
CTTTGAGCCCAAGGTTGTCC+AGG + chr3_2:54100687-54100706 Msa0411710:CDS 55.0%
ATTGAGATGGCCCGAGAGTG+TGG + chr3_2:54101172-54101191 Msa0411710:CDS 55.0%
ACCTATCGCACCACACTCTC+GGG - chr3_2:54101185-54101204 None:intergenic 55.0%
CACCTATCGCACCACACTCT+CGG - chr3_2:54101186-54101205 None:intergenic 55.0%
! GAGAGTGTGGTGCGATAGGT+GGG + chr3_2:54101185-54101204 Msa0411710:CDS 55.0%
AGAGTGTGGTGCGATAGGTG+GGG + chr3_2:54101186-54101205 Msa0411710:CDS 55.0%
! CTCACCGGCATTGGAAGGTT+GGG - chr3_2:54101269-54101288 None:intergenic 55.0%
AAGTCCATCCTCACCGGCAT+TGG - chr3_2:54101278-54101297 None:intergenic 55.0%
TTCCATGCTTCTCCCTAGGG+CGG - chr3_2:54102115-54102134 None:intergenic 55.0%
ATAGAGAGGAGTGGGCGACA+AGG + chr3_2:54102511-54102530 Msa0411710:intron 55.0%
GTGCAGCAACGCCTTGAATC+TGG + chr3_2:54102884-54102903 Msa0411710:CDS 55.0%
! CGCCTTTTGTTGAGTGTGCC+AGG + chr3_2:54103594-54103613 Msa0411710:intron 55.0%
CTGCCCATCCAGCTGAACAA+CGG + chr3_2:54103979-54103998 Msa0411710:CDS 55.0%
GGACCGTTGTTCAGCTGGAT+GGG - chr3_2:54103985-54104004 None:intergenic 55.0%
AGGACCGTTGTTCAGCTGGA+TGG - chr3_2:54103986-54104005 None:intergenic 55.0%
GGCACCACTAGATCCCACAA+AGG + chr3_2:54104142-54104161 Msa0411710:CDS 55.0%
GCTTTCACTTCTGCAGCAGC+TGG + chr3_2:54104679-54104698 Msa0411710:CDS 55.0%
ACATGTCCCGAAAGCTCTCG+TGG + chr3_2:54104720-54104739 Msa0411710:CDS 55.0%
!! GAAGAAGGTGGTGGCGGTGA+AGG - chr3_2:54096849-54096868 None:intergenic 60.0%
! GGTGGTTGAAGAGGGGGTGT+AGG - chr3_2:54097020-54097039 None:intergenic 60.0%
GCTGAGGAGAGCCATGAGAC+GGG - chr3_2:54097090-54097109 None:intergenic 60.0%
!! GTTGGATTGGAGGGGTGCTG+AGG - chr3_2:54097106-54097125 None:intergenic 60.0%
! ATGGGCTGTGATTGTGGCGG+TGG - chr3_2:54097140-54097159 None:intergenic 60.0%
AACTGCTGCCAATGCTGCCG+CGG + chr3_2:54097187-54097206 Msa0411710:CDS 60.0%
CAGCCTAATCAACGCTGCCG+CGG - chr3_2:54097207-54097226 None:intergenic 60.0%
AGCTGAGGCTGCACTTCACC+AGG - chr3_2:54097302-54097321 None:intergenic 60.0%
ATCGGCGCAACCTCAAGCTG+AGG - chr3_2:54097317-54097336 None:intergenic 60.0%
CTTGGGCTCAAAGGAGGAGG+TGG - chr3_2:54100680-54100699 None:intergenic 60.0%
CACCTCCTCCTTTGAGCCCA+AGG + chr3_2:54100678-54100697 Msa0411710:CDS 60.0%
! CGAGAGTGTGGTGCGATAGG+TGG + chr3_2:54101184-54101203 Msa0411710:CDS 60.0%
TTCTACTGGAGGGGACTCGC+TGG + chr3_2:54101243-54101262 Msa0411710:CDS 60.0%
CTGGCCCAACCTTCCAATGC+CGG + chr3_2:54101262-54101281 Msa0411710:CDS 60.0%
! CCTCACCGGCATTGGAAGGT+TGG - chr3_2:54101270-54101289 None:intergenic 60.0%
CCAACCTTCCAATGCCGGTG+AGG + chr3_2:54101267-54101286 Msa0411710:CDS 60.0%
! CCATCCTCACCGGCATTGGA+AGG - chr3_2:54101274-54101293 None:intergenic 60.0%
CCTTCCAATGCCGGTGAGGA+TGG + chr3_2:54101271-54101290 Msa0411710:CDS 60.0%
GCACTAGGAGACGGGGAAGA+CGG - chr3_2:54101427-54101446 None:intergenic 60.0%
GCTCTCGTGGATGACAGACG+TGG + chr3_2:54104733-54104752 Msa0411710:CDS 60.0%
GCGGTGAAGGAGCGGAGGAA+GGG - chr3_2:54096836-54096855 None:intergenic 65.0%
!! AGGTGGTGGCGGTGAAGGAG+CGG - chr3_2:54096844-54096863 None:intergenic 65.0%
!! ATGAGACGGGCACCGGCGTT+AGG - chr3_2:54097077-54097096 None:intergenic 65.0%
TAACGCCGGTGCCCGTCTCA+TGG + chr3_2:54097076-54097095 Msa0411710:CDS 65.0%
GAGAGCCATGAGACGGGCAC+CGG - chr3_2:54097084-54097103 None:intergenic 65.0%
GGCTGTGATTGTGGCGGTGG+TGG - chr3_2:54097137-54097156 None:intergenic 65.0%
CGCCGGATTAACAGCGCCAG+AGG - chr3_2:54097165-54097184 None:intergenic 65.0%
!! CTGCCGCGGCAGCGTTGATT+AGG + chr3_2:54097201-54097220 Msa0411710:CDS 65.0%
! GCCCGAGAGTGTGGTGCGAT+AGG + chr3_2:54101181-54101200 Msa0411710:CDS 65.0%
GACGGGGAAGACGGACCTGA+TGG - chr3_2:54101418-54101437 None:intergenic 65.0%
AGAAGGCTTGAGGCCGCCCT+AGG + chr3_2:54102099-54102118 Msa0411710:CDS 65.0%
GAAGGCTTGAGGCCGCCCTA+GGG + chr3_2:54102100-54102119 Msa0411710:CDS 65.0%
GAGAGGAGTGGGCGACAAGG+CGG + chr3_2:54102514-54102533 Msa0411710:intron 65.0%
GGCGGTGAAGGAGCGGAGGA+AGG - chr3_2:54096837-54096856 None:intergenic 70.0%
!! TGGTGGCGGTGAAGGAGCGG+AGG - chr3_2:54096841-54096860 None:intergenic 70.0%
CAACGCTGCCGCGGCAGCAT+TGG - chr3_2:54097198-54097217 None:intergenic 70.0%
GGCCGCCCTAGGGAGAAGCA+TGG + chr3_2:54102110-54102129 Msa0411710:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 54096496 54105205 54096496 ID=Msa0411710;Name=Msa0411710
chr3_2 mRNA 54096496 54105205 54096496 ID=Msa0411710-mRNA-1;Parent=Msa0411710;Name=Msa0411710-mRNA-1;_AED=0.04;_eAED=0.04;_QI=227|1|1|1|1|1|12|274|1385
chr3_2 exon 54096496 54097484 54096496 ID=Msa0411710-mRNA-1:exon:10947;Parent=Msa0411710-mRNA-1
chr3_2 exon 54098367 54098416 54098367 ID=Msa0411710-mRNA-1:exon:10948;Parent=Msa0411710-mRNA-1
chr3_2 exon 54098505 54098661 54098505 ID=Msa0411710-mRNA-1:exon:10949;Parent=Msa0411710-mRNA-1
chr3_2 exon 54098765 54098983 54098765 ID=Msa0411710-mRNA-1:exon:10950;Parent=Msa0411710-mRNA-1
chr3_2 exon 54099556 54099684 54099556 ID=Msa0411710-mRNA-1:exon:10951;Parent=Msa0411710-mRNA-1
chr3_2 exon 54099957 54101552 54099957 ID=Msa0411710-mRNA-1:exon:10952;Parent=Msa0411710-mRNA-1
chr3_2 exon 54102027 54102386 54102027 ID=Msa0411710-mRNA-1:exon:10953;Parent=Msa0411710-mRNA-1
chr3_2 exon 54102515 54102634 54102515 ID=Msa0411710-mRNA-1:exon:10954;Parent=Msa0411710-mRNA-1
chr3_2 exon 54102764 54102934 54102764 ID=Msa0411710-mRNA-1:exon:10955;Parent=Msa0411710-mRNA-1
chr3_2 exon 54103862 54104020 54103862 ID=Msa0411710-mRNA-1:exon:10956;Parent=Msa0411710-mRNA-1
chr3_2 exon 54104137 54104262 54104137 ID=Msa0411710-mRNA-1:exon:10957;Parent=Msa0411710-mRNA-1
chr3_2 exon 54104623 54105205 54104623 ID=Msa0411710-mRNA-1:exon:10958;Parent=Msa0411710-mRNA-1
chr3_2 five_prime_UTR 54096496 54096722 54096496 ID=Msa0411710-mRNA-1:five_prime_utr;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54096723 54097484 54096723 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54098367 54098416 54098367 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54098505 54098661 54098505 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54098765 54098983 54098765 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54099556 54099684 54099556 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54099957 54101552 54099957 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54102027 54102386 54102027 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54102515 54102634 54102515 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54102764 54102934 54102764 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54103862 54104020 54103862 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54104137 54104262 54104137 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 CDS 54104623 54104931 54104623 ID=Msa0411710-mRNA-1:cds;Parent=Msa0411710-mRNA-1
chr3_2 three_prime_UTR 54104932 54105205 54104932 ID=Msa0411710-mRNA-1:three_prime_utr;Parent=Msa0411710-mRNA-1
Gene Sequence

>Msa0411710

ATGTCTTCTCCCAATCAACCACCACCTTCTCCAACCCCTTTCGATATGCACACTTTCTTCAATCCCCCAAACCCTAACCCTAACCCTAACCCTAACATTTCTTCCCAATTCCCTTCCTCCGCTCCTTCACCGCCACCACCTTCTTCATCCTCCTCTTACCCTTTCCCTCACAACAACAATAACTACCCTTACGATCACCACCATCACCAGCTTCAGCTTCAGCATCAGCATCAACAACAGCACCATCAACAAAACCAGACCAATTTTCCAATTCAACACCGTTCAATTTCATTCCCTACACCCCCTCTTCAACCACCTCAACAACCTCAACCAATCCCACCTCCTTCAAATCCTAACGCCGGTGCCCGTCTCATGGCTCTCCTCAGCACCCCTCCAATCCAACAACAACAACCACCACCGCCACAATCACAGCCCATCTCCTCTGGCGCTGTTAATCCGGCGATAACTGCTGCCAATGCTGCCGCGGCAGCGTTGATTAGGCTGCCGAGTAGTAAAGTGCCGAAAGGAAGGCATTTGATTGGTGATCATGTTGTGTATGATGTGGATGTTAGGTTGCCTGGTGAAGTGCAGCCTCAGCTTGAGGTTGCGCCGATTACGAAATATGGATCGGATCCTAATCCGGTTTTGGGTCGACAGATTGCTGTGAATAAGTCTTATATTTGTTATGGGTTGAAACAGGGGAATATCAGGGTGCTTAATATTCATACTGCTGTTAGATCTTTGCTTAGAGGGCACACTCAGAGGGTCACAGACTTGGCATTCTTTGCTGAAGATGTTCATCTCCTGGCTAGTGTTGGCACAGATGGCCGTGTCTTTGTGTGGAAAATTTCTGAAGGTCCGGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTGCTGTTCAAATAGTCGGAGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGCCACAAACAAGAAATTTTGATAGTTGGTATGGGAAAAAATGTTCTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAGCCTTTGTGGCAGAAGATCCTCCAAAATGTCCTCTTGACAAGCTCATTGATGGGGTTCAACTTGTAGGAACACATGATGGGGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAATCGATTGGTATCAGCATCACAGGATGGCACGATAAAGATATGGGAAGATCGGAAGTCACAGCCACTTGCTGTGTTCAGACCTCATGATGGGCATCCTGTTTTTTCTGCTACATTTTTTACTGCTCCACACCAGCCTGATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAAGTGAAGCTCTGGGTCTCAGCTAGTGAAGAAGGTTGGCTGCTCCCAAGCAATACTGAAACATGGAAATGCACTCAGACTTTGGAGTTGAAGAGTTCAGCTAAGCCGTCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGCCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCATTTGGAATATGGTCCTAATCCCGAATCAACTCGCATGGATTATATGTCCGAGTTTACTGTGACCATGCCCATTCTTAGTTTTACTGGAACAAGTGATATTTTGCCTCATGGGGAACATATTGTTCAGGTTTATTGTGTTCAGACACTGGCTATTCAGCAGTATGCTTTGGATTTGGCACAATGCTTGCCTCCACCATTAGAAAATGCGGGACTAGATAAGTCTGATTCCAGTGTTTCACGAGATGCAATTACTGCTGAAGGATTTGCCTCTTTAGACTCGTCTGCAGGTAGAACATCTGAGATGTCTTTACCCAGTTCTGCTCCCAAAACAATGATGCAAGCAAGTAGCACTGAGAGTGGTCTCGTGTCAAGATACCCTTTAAGCTCAGGTCATACTGAAGCACCTATTTCTAGACAAATCAGCAGTTCAAATATTGAAGCTAAAACTGTTACACTGGCTCCTTCTAGTAGTGATGCTGATATTGTTTGTGTTCCTTCTCCACCTCCTCCTTTGAGCCCAAGGTTGTCCAGGAAGCTTTCTGATTTCAGGAGTCCACAATCTAACTTGAGTGATCATGTTGGGGACCAAGCTGTTAATGATTATTCTGTTGACAGACAAATGGATACAATTCACAGGAACTTGTCCGACCAATTTAATAGCGATACAAAGAATGATGACAATAAAAACAAACAGGATGACATTTCTACTGTACTTAACCCTTCTGTCATTTTTAAGCAACCAACTCATCTGGTTACACCATCTGAGATTACAAAAGCCAGTTCCTCCTCTGAGACTAATATGGTCGACAGAGTGAGTGAGGTAGAAACAAAGATCCAGGATGTGGTTGATGTGGGTAATGCCGAAGTAGAAGTGAAAGTGGTAGGTGAAGCAAGGCCTAATCAAAATGATGAACTTGGCAGGCAGGGGCCACCACAAAACCCAGTTTCTGATGGCAAAGAAAAATTCTTTTGCTCTCAGGCTTCTGATCTTGGCATTGAGATGGCCCGAGAGTGTGGTGCGATAGGTGGGGAGACTTACATTACAGAGGAACCTGGACAAGTTGATTCTACTGGAGGGGACTCGCTGGCCCAACCTTCCAATGCCGGTGAGGATGGACTTCAAGACTTGCCAAAAGATGTCCATGAAAAGGTTTCCGACTCATCTACATCAATGGTAGTACCACCATCACCTGCATCTAATACAAAAGGGAAGAGACAAAAGGGTAAGAACTCTCAACCATCAGGTCCGTCTTCCCCGTCTCCTAGTGCATGCAATTCAACCGATTCGTCCAATGAACCAAATGGAATTTCAAACCTCCCATGTACTGAAAATAGCAATCCTCAAATTGCGGCAATGCAAGATTCACTCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGACAATGACGGTAACAGTTCCAGTTACAAAAGAGGGTAGAAGGCTTGAGGCCGCCCTAGGGAGAAGCATGGAAAAAGCTGTTAAGTCCAATGCTGATGCTTTGTGGGCTAGAATTCAAGAGGAAAATGCAAAAAATGAGAAGTTGTTGCGAGACCGTTTCCAACATGTTACAGGTTTGATTACCAACTTCATGAACAAGGATCTACCAGCAGCATTGGAGAAAACTGTAAAGAAGGAAATGACTTCAGTTGCGCAAGCTTTAGTTCGTTCAATGTCTCCTGCTATTGAGAAAACATTATCATCTACTATCGCGGAATCCTTCCAGAGAGGAGTGGGCGACAAGGCGGTGAATCAACTTGATAAATCAGTTAATTTAAAGCTCGAAGCTACTGTAGCTAGGCAAATCCAAGCACAGTTTCAGACAACTGTCAAACAGGCACTTCAGGATGCACTTAAATCCAGTTTTGAAACGACAGTGGTCCCTGCATTTGAGATGTCCTGCAAAGCCATGTTTGAGCAAGTTGATTCTACATTCCAGAAAGGCATGGCTGAACATTCAAATGCAGTGCAGCAACGCCTTGAATCTGGGCCTACTTCGTTGGCAATGACTCTAAGGGATTCCATTAATTCAGCATCATCAGTTACTCAAACCTTGAGTAGAGAAGTGCTCGAGGGTCAGAGAAAGCTAATGGCACTTGCAACCTCAAGAACAAACTCTGGCACATTGAATACTCTGCCCATCCAGCTGAACAACGGTCCTTTACTTCATGAAAAGGTTGAGGCACCACTAGATCCCACAAAGGAGCTAGCAAGGTTGATTTCTGAGCGGAAATATGAGGAGGCATTTATTGCAGCACTACACAGAAGTGATGTATCTATTGTATCTTGGTTATGCTCTCAGGTTGATTTACATGGACTTTTGACATTGGTTCCTCTTCCCTTAAGCCAAGGTGTAGTGCTTTCACTTCTGCAGCAGCTGGCATGTGATATCAACAATGACATGTCCCGAAAGCTCTCGTGGATGACAGACGTGGCTACTGCTATTAATCCCTCAGATCCCATGATAACAATGCACGTGCGACCCATCTTTGAGCAAGTTTATCAGATACTGAACCATCAACGTAACTTGCCTTCTATCACTGGATCTGATCTTTCAAGTACCCGTCTTTTATTGCATGTCATCAACTCCATGCTGACGACATGTAAATGA
Protein sequence

>Msa0411710

MSSPNQPPPSPTPFDMHTFFNPPNPNPNPNPNISSQFPSSAPSPPPPSSSSSYPFPHNNNNYPYDHHHHQLQLQHQHQQQHHQQNQTNFPIQHRSISFPTPPLQPPQQPQPIPPPSNPNAGARLMALLSTPPIQQQQPPPPQSQPISSGAVNPAITAANAAAAALIRLPSSKVPKGRHLIGDHVVYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQITANIVIAVQIVGEEKVEHPQICWHCHKQEILIVGMGKNVLRIDTTKVGNGEAFVAEDPPKCPLDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKSQPLAVFRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSNTETWKCTQTLELKSSAKPSLKDAFFNQVAALPHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYMSEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLENAGLDKSDSSVSRDAITAEGFASLDSSAGRTSEMSLPSSAPKTMMQASSTESGLVSRYPLSSGHTEAPISRQISSSNIEAKTVTLAPSSSDADIVCVPSPPPPLSPRLSRKLSDFRSPQSNLSDHVGDQAVNDYSVDRQMDTIHRNLSDQFNSDTKNDDNKNKQDDISTVLNPSVIFKQPTHLVTPSEITKASSSSETNMVDRVSEVETKIQDVVDVGNAEVEVKVVGEARPNQNDELGRQGPPQNPVSDGKEKFFCSQASDLGIEMARECGAIGGETYITEEPGQVDSTGGDSLAQPSNAGEDGLQDLPKDVHEKVSDSSTSMVVPPSPASNTKGKRQKGKNSQPSGPSSPSPSACNSTDSSNEPNGISNLPCTENSNPQIAAMQDSLNQLLTMQKEMQKQMTMTVTVPVTKEGRRLEAALGRSMEKAVKSNADALWARIQEENAKNEKLLRDRFQHVTGLITNFMNKDLPAALEKTVKKEMTSVAQALVRSMSPAIEKTLSSTIAESFQRGVGDKAVNQLDKSVNLKLEATVARQIQAQFQTTVKQALQDALKSSFETTVVPAFEMSCKAMFEQVDSTFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQTLSREVLEGQRKLMALATSRTNSGTLNTLPIQLNNGPLLHEKVEAPLDPTKELARLISERKYEEAFIAALHRSDVSIVSWLCSQVDLHGLLTLVPLPLSQGVVLSLLQQLACDINNDMSRKLSWMTDVATAINPSDPMITMHVRPIFEQVYQILNHQRNLPSITGSDLSSTRLLLHVINSMLTTCK*