AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0414520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414520 MtrunA17_Chr3g0107541 83.750 80 13 0 1 80 258 337 4.43e-41 140
Msa0414520 MtrunA17_Chr3g0105751 79.104 67 14 0 1 67 255 321 5.54e-33 116
Msa0414520 MtrunA17_Chr3g0107561 87.097 62 8 0 3 64 255 316 8.35e-31 110
Msa0414520 MtrunA17_Chr3g0107611 54.430 79 34 1 4 80 264 342 7.51e-23 90.1
Msa0414520 MtrunA17_Chr8g0370651 52.500 80 38 0 1 80 255 334 1.78e-22 89.4
Msa0414520 MtrunA17_Chr8g0370641 51.899 79 38 0 1 79 251 329 7.28e-22 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414520 AT5G35917.1 47.500 80 42 0 1 80 259 338 8.24e-21 84.7
Msa0414520 AT5G05260.2 47.500 80 42 0 1 80 255 334 1.08e-20 84.3
Msa0414520 AT4G39950.1 45.000 80 44 0 1 80 265 344 1.36e-19 81.3
Msa0414520 AT4G39950.2 45.000 80 44 0 1 80 305 384 1.78e-19 81.3
Msa0414520 AT2G22330.1 43.750 80 45 0 1 80 267 346 1.25e-18 78.6
Msa0414520 AT2G22330.2 43.750 80 45 0 1 80 290 369 1.35e-18 78.6
Msa0414520 AT1G16400.1 43.590 78 43 1 3 79 258 335 3.44e-15 68.9
Msa0414520 AT1G16410.1 42.308 78 44 1 3 79 259 336 7.01e-15 68.2
Msa0414520 AT1G16410.2 42.308 78 44 1 3 79 259 336 1.09e-14 67.4
Msa0414520 AT1G58260.1 44.595 74 40 1 7 79 254 327 5.81e-12 59.7

Find 112 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGATTCTCTCTTCAATT+AGG 0.154033 3_2:-60051776 None:intergenic
AAGATTGATTCTTGATATAT+TGG 0.187745 3_2:-60052780 None:intergenic
TCCAATTCTTCTGTGGCTTT+TGG 0.209981 3_2:-60052344 None:intergenic
GGTTTGTTTGCAAGCATTTC+AGG 0.232153 3_2:-60051135 None:intergenic
CTCAGTAATGTAGCATCTTA+TGG 0.249041 3_2:-60051052 None:intergenic
ATCAATGGCTTCAAGATAAA+AGG 0.254882 3_2:+60051430 Msa0414520:five_prime_UTR
GTTTAGGAATATCTGATTCT+TGG 0.271659 3_2:-60052394 None:intergenic
TAGGGTTCAGTCCAAACTTT+TGG 0.273056 3_2:-60052575 None:intergenic
ATTTCACTAGCTAGGCTTAT+TGG 0.278371 3_2:-60051306 None:intergenic
TTTGATTCTCTCTTCAATTA+GGG 0.281399 3_2:-60051775 None:intergenic
GCAATGGAGGGACAAGTAAC+AGG 0.334653 3_2:-60051240 None:intergenic
TCCAAAAGCCACAGAAGAAT+TGG 0.337259 3_2:+60052343 Msa0414520:three_prime_UTR
TTGGGAGAAATCCAAAAGTT+TGG 0.343161 3_2:+60052564 Msa0414520:three_prime_UTR
GGCTTTGCTGCAACCGTTAG+TGG 0.354038 3_2:-60052836 None:intergenic
TCCTAAACTAAACTTCTTGA+TGG 0.355919 3_2:+60052409 Msa0414520:three_prime_UTR
AAGGATATGAACTTCAATTC+TGG 0.360150 3_2:-60052656 None:intergenic
AGATTGATTCTTGATATATT+GGG 0.365747 3_2:-60052779 None:intergenic
GGGAACATTGAAAGCCGTTA+TGG 0.376372 3_2:-60052462 None:intergenic
GCCATCAAGAAGTTTAGTTT+AGG 0.379093 3_2:-60052410 None:intergenic
GACTTAGATGCATGGTCATA+AGG 0.379157 3_2:+60051707 Msa0414520:exon
GAAGAATTGGACAATATTGT+TGG 0.396293 3_2:+60052356 Msa0414520:three_prime_UTR
GAACGTCATCTTAAGAATGA+TGG 0.410186 3_2:+60052611 Msa0414520:three_prime_UTR
TCATTCTTAAGATGACGTTC+TGG 0.411841 3_2:-60052608 None:intergenic
CAATCCATCCAATGCTTGAA+TGG 0.413052 3_2:+60052285 Msa0414520:exon
ATCAAGAGATATAACACCTT+TGG 0.413052 3_2:-60052810 None:intergenic
ACGTTCTGGTTTGAATTTGT+AGG 0.416029 3_2:-60052594 None:intergenic
ATTTCCTTCATTGTTAATAA+CGG 0.418798 3_2:-60051876 None:intergenic
CGTTCTGGTTTGAATTTGTA+GGG 0.423343 3_2:-60052593 None:intergenic
ACCAACTATAGGCAATGGTT+TGG 0.432042 3_2:-60051106 None:intergenic
CCAACTATAGGCAATGGTTT+GGG 0.432686 3_2:-60051105 None:intergenic
TCTACGAATGATACAATGAT+TGG 0.434175 3_2:+60052491 Msa0414520:three_prime_UTR
TCAGGAAGATTACCAACTAT+AGG 0.436534 3_2:-60051117 None:intergenic
CACATAAAACATAAGATTGT+CGG 0.438363 3_2:-60051463 None:intergenic
GGTTACTCCATGGCTTCACT+TGG 0.446859 3_2:+60052747 Msa0414520:three_prime_UTR
ATAGGCAATGGTTTGGGACC+AGG 0.446943 3_2:-60051099 None:intergenic
TTGTGTATCCACCTAGCTGC+AGG 0.449285 3_2:-60051156 None:intergenic
TCTCTCCACACAGGCATCAA+TGG 0.449375 3_2:+60051415 Msa0414520:five_prime_UTR
GGAACATTGAAAGCCGTTAT+GGG 0.462498 3_2:-60052461 None:intergenic
CTGATTATATCCCATGTTTG+AGG 0.467744 3_2:+60051678 Msa0414520:five_prime_UTR
TCTCAAGAATTCACGGGCAA+TGG 0.468248 3_2:-60051256 None:intergenic
GCTAGTGAAATCATCTCAAA+TGG 0.469957 3_2:+60051318 Msa0414520:five_prime_UTR
TGCTTGGAAGAAGTGGTCTT+GGG 0.478573 3_2:+60052546 Msa0414520:three_prime_UTR
GCTAATGTCCATTCAAGCAT+TGG 0.481478 3_2:-60052293 None:intergenic
TTGCTTGGAAGAAGTGGTCT+TGG 0.484460 3_2:+60052545 Msa0414520:three_prime_UTR
AGAATCAAACAATGGAATGA+TGG 0.485607 3_2:+60051789 Msa0414520:CDS
ACTTAGATGCATGGTCATAA+GGG 0.485663 3_2:+60051708 Msa0414520:exon
CCCAAACCATTGCCTATAGT+TGG 0.486285 3_2:+60051105 Msa0414520:five_prime_UTR
GGAAATTACTTGATACCAAA+GGG 0.486694 3_2:+60052512 Msa0414520:three_prime_UTR
ACAGGAAGGCGTGGTTGTCC+TGG 0.486752 3_2:+60052683 Msa0414520:three_prime_UTR
ACCTCAATTCTTGTACCCTA+TGG 0.492138 3_2:+60051348 Msa0414520:five_prime_UTR
GGTTGTCCTGGTATCATGCT+TGG 0.499438 3_2:+60052695 Msa0414520:three_prime_UTR
ATTAACAATGAAGGAAATCA+AGG 0.503464 3_2:+60051881 Msa0414520:CDS
TTTGGAAAATGTATGAAGGA+TGG 0.507223 3_2:+60051585 Msa0414520:five_prime_UTR
TTGAGATGATTTCACTAGCT+AGG 0.511912 3_2:-60051314 None:intergenic
TGAAAGCCGTTATGGGATGC+AGG 0.515734 3_2:-60052454 None:intergenic
ACCACGCCTTCCTGTACTAA+AGG 0.516440 3_2:-60052675 None:intergenic
ATGGTGGCCTTGTCAATGTA+AGG 0.517075 3_2:+60051502 Msa0414520:five_prime_UTR
TTTCTGCCTGCATCCCATAA+CGG 0.518601 3_2:+60052448 Msa0414520:three_prime_UTR
AATATTGTCCAATTCTTCTG+TGG 0.519661 3_2:-60052351 None:intergenic
AGCAATACATGACTACCCTT+TGG 0.519982 3_2:-60052527 None:intergenic
AAGGGTAGTCATGTATTGCT+TGG 0.520514 3_2:+60052530 Msa0414520:three_prime_UTR
CAAGAATTCACGGGCAATGG+AGG 0.521971 3_2:-60051253 None:intergenic
TAATCCGTTATTAACAATGA+AGG 0.525844 3_2:+60051872 Msa0414520:CDS
AAGTTCATATCCTTTAGTAC+AGG 0.529485 3_2:+60052665 Msa0414520:three_prime_UTR
GAAATAGCGCGTATCCGCCT+AGG 0.530309 3_2:+60051201 Msa0414520:five_prime_UTR
TACAATTCTGCTGCTAATCG+TGG 0.533354 3_2:-60052857 None:intergenic
TAGGCAATGGTTTGGGACCA+GGG 0.535787 3_2:-60051098 None:intergenic
AGTCAAGTAACCTCAAACAT+GGG 0.536224 3_2:-60051688 None:intergenic
ATGTCCATTCAAGCATTGGA+TGG 0.540149 3_2:-60052289 None:intergenic
GGATAACATGGACATTTCCT+AGG 0.543053 3_2:-60051218 None:intergenic
TGGAAATTACTTGATACCAA+AGG 0.547170 3_2:+60052511 Msa0414520:three_prime_UTR
AACGTCATCTTAAGAATGAT+GGG 0.550072 3_2:+60052612 Msa0414520:three_prime_UTR
CATGTATTGCTTGGAAGAAG+TGG 0.552729 3_2:+60052539 Msa0414520:three_prime_UTR
ATCTCTTGATGAGCCACTAA+CGG 0.553205 3_2:+60052823 Msa0414520:three_prime_UTR
TTCTATGTAGGAATTGATGA+TGG 0.554104 3_2:+60052252 Msa0414520:intron
TGACTATAATGCTATTAGCT+AGG 0.558207 3_2:+60052726 Msa0414520:three_prime_UTR
AAGTCAAGTAACCTCAAACA+TGG 0.559690 3_2:-60051689 None:intergenic
TATTGTTGGAAAAGATAGAC+TGG 0.561753 3_2:+60052370 Msa0414520:three_prime_UTR
TAGGTGGATACACAAGACTA+TGG 0.562046 3_2:+60051164 Msa0414520:five_prime_UTR
GTGCACTCCAAGTGAAGCCA+TGG 0.562249 3_2:-60052754 None:intergenic
TGTATCATTCGTAGAGACAT+GGG 0.564941 3_2:-60052483 None:intergenic
GACAAGTAACAGGGATAACA+TGG 0.567850 3_2:-60051230 None:intergenic
GTACTTTGGAAAATGTATGA+AGG 0.575398 3_2:+60051581 Msa0414520:five_prime_UTR
ATTGCTACTCAACATTATTG+TGG 0.576812 3_2:+60051525 Msa0414520:five_prime_UTR
CTATTAGCTAGGTTACTCCA+TGG 0.577297 3_2:+60052737 Msa0414520:three_prime_UTR
GCCATAGGGTACAAGAATTG+AGG 0.578397 3_2:-60051349 None:intergenic
AGATTACCAACTATAGGCAA+TGG 0.578490 3_2:-60051111 None:intergenic
CAATGGAGGGACAAGTAACA+GGG 0.579220 3_2:-60051239 None:intergenic
TCCTTTAGTACAGGAAGGCG+TGG 0.586631 3_2:+60052674 Msa0414520:three_prime_UTR
AAGAATTCACGGGCAATGGA+GGG 0.587985 3_2:-60051252 None:intergenic
AGGCAATGGTTTGGGACCAG+GGG 0.589217 3_2:-60051097 None:intergenic
TTGTATCATTCGTAGAGACA+TGG 0.592919 3_2:-60052484 None:intergenic
TTGCAAACAAACCTGCAGCT+AGG 0.602841 3_2:+60051145 Msa0414520:five_prime_UTR
TGGATCAAAGAATGTTGAAG+AGG 0.605991 3_2:+60051809 Msa0414520:CDS
TTGTACCCTATGGCGAACAA+TGG 0.607756 3_2:+60051358 Msa0414520:five_prime_UTR
TCATATCCTTTAGTACAGGA+AGG 0.608298 3_2:+60052669 Msa0414520:three_prime_UTR
GTGGAGCCAAGCATGATACC+AGG 0.611313 3_2:-60052701 None:intergenic
GGAATTGATGATGGCAATGG+TGG 0.616942 3_2:+60052261 Msa0414520:intron
GGTTACTTGACTTAGATGCA+TGG 0.624272 3_2:+60051699 Msa0414520:exon
TAATAGCATTATAGTCATTG+TGG 0.627153 3_2:-60052720 None:intergenic
TTGAAGAGAGAATCAAACAA+TGG 0.627532 3_2:+60051781 Msa0414520:CDS
CAAACAAACCTGCAGCTAGG+TGG 0.631866 3_2:+60051148 Msa0414520:five_prime_UTR
GTGTACAACAAATGTAACAA+TGG 0.640902 3_2:+60051483 Msa0414520:five_prime_UTR
GGCAATGGTTTGGGACCAGG+GGG 0.644821 3_2:-60051096 None:intergenic
GATGCATGGTCATAAGGGCA+AGG 0.647047 3_2:+60051713 Msa0414520:exon
AAGAATTGTTCTCTCCACAC+AGG 0.650085 3_2:+60051406 Msa0414520:five_prime_UTR
TAGCAATCCTTACATTGACA+AGG 0.660229 3_2:-60051509 None:intergenic
GTAGGAATTGATGATGGCAA+TGG 0.672523 3_2:+60052258 Msa0414520:intron
TGAAGCCATTGATGCCTGTG+TGG 0.690414 3_2:-60051420 None:intergenic
TACAACAAATGTAACAATGG+TGG 0.693075 3_2:+60051486 Msa0414520:five_prime_UTR
GTATCATTCGTAGAGACATG+GGG 0.704429 3_2:-60052482 None:intergenic
TAACATGGACATTTCCTAGG+CGG 0.727704 3_2:-60051215 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATAAAATTTGAATTTAA+TGG + chr3_2:60052006-60052025 Msa0414520:intron 10.0%
!! AGAATAAAATTTGAATTTAA+TGG + chr3_2:60052006-60052025 Msa0414520:intron 10.0%
!!! GAAAACTATTTTTCAATACA+AGG + chr3_2:60051559-60051578 Msa0414520:five_prime_UTR 20.0%
!! ATTTCCTTCATTGTTAATAA+CGG - chr3_2:60051879-60051898 None:intergenic 20.0%
!!! AGATTGATTCTTGATATATT+GGG - chr3_2:60052782-60052801 None:intergenic 20.0%
!!! AAGATTGATTCTTGATATAT+TGG - chr3_2:60052783-60052802 None:intergenic 20.0%
!!! GAAAACTATTTTTCAATACA+AGG + chr3_2:60051559-60051578 Msa0414520:five_prime_UTR 20.0%
!! ATTTCCTTCATTGTTAATAA+CGG - chr3_2:60051879-60051898 None:intergenic 20.0%
!!! AGATTGATTCTTGATATATT+GGG - chr3_2:60052782-60052801 None:intergenic 20.0%
!!! AAGATTGATTCTTGATATAT+TGG - chr3_2:60052783-60052802 None:intergenic 20.0%
! CACATAAAACATAAGATTGT+CGG - chr3_2:60051466-60051485 None:intergenic 25.0%
!!! TTTTTCAATACAAGGTACTT+TGG + chr3_2:60051567-60051586 Msa0414520:five_prime_UTR 25.0%
! TTTGATTCTCTCTTCAATTA+GGG - chr3_2:60051778-60051797 None:intergenic 25.0%
! TAATCCGTTATTAACAATGA+AGG + chr3_2:60051872-60051891 Msa0414520:CDS 25.0%
! ATTAACAATGAAGGAAATCA+AGG + chr3_2:60051881-60051900 Msa0414520:CDS 25.0%
! TTGTAGTACTTTAAACGAAA+GGG + chr3_2:60052119-60052138 Msa0414520:intron 25.0%
! TTGATCATACATATCAGAAT+TGG - chr3_2:60052189-60052208 None:intergenic 25.0%
! TAATAGCATTATAGTCATTG+TGG - chr3_2:60052723-60052742 None:intergenic 25.0%
! CACATAAAACATAAGATTGT+CGG - chr3_2:60051466-60051485 None:intergenic 25.0%
!!! TTTTTCAATACAAGGTACTT+TGG + chr3_2:60051567-60051586 Msa0414520:five_prime_UTR 25.0%
! TTTGATTCTCTCTTCAATTA+GGG - chr3_2:60051778-60051797 None:intergenic 25.0%
! TAATCCGTTATTAACAATGA+AGG + chr3_2:60051872-60051891 Msa0414520:CDS 25.0%
! ATTAACAATGAAGGAAATCA+AGG + chr3_2:60051881-60051900 Msa0414520:CDS 25.0%
! TTGTAGTACTTTAAACGAAA+GGG + chr3_2:60052119-60052138 Msa0414520:intron 25.0%
! TTGATCATACATATCAGAAT+TGG - chr3_2:60052189-60052208 None:intergenic 25.0%
! TAATAGCATTATAGTCATTG+TGG - chr3_2:60052723-60052742 None:intergenic 25.0%
! ATGTTTTCTCAAGAATTCAC+GGG - chr3_2:60051265-60051284 None:intergenic 30.0%
! CATGTTTTCTCAAGAATTCA+CGG - chr3_2:60051266-60051285 None:intergenic 30.0%
ATCAATGGCTTCAAGATAAA+AGG + chr3_2:60051430-60051449 Msa0414520:five_prime_UTR 30.0%
GTGTACAACAAATGTAACAA+TGG + chr3_2:60051483-60051502 Msa0414520:five_prime_UTR 30.0%
TACAACAAATGTAACAATGG+TGG + chr3_2:60051486-60051505 Msa0414520:five_prime_UTR 30.0%
ATTGCTACTCAACATTATTG+TGG + chr3_2:60051525-60051544 Msa0414520:five_prime_UTR 30.0%
! GTACTTTGGAAAATGTATGA+AGG + chr3_2:60051581-60051600 Msa0414520:five_prime_UTR 30.0%
TTTGGAAAATGTATGAAGGA+TGG + chr3_2:60051585-60051604 Msa0414520:five_prime_UTR 30.0%
CAAGGTAAAAAATGCAATGA+GGG + chr3_2:60051731-60051750 Msa0414520:CDS 30.0%
GTTTGATTCTCTCTTCAATT+AGG - chr3_2:60051779-60051798 None:intergenic 30.0%
TTGAAGAGAGAATCAAACAA+TGG + chr3_2:60051781-60051800 Msa0414520:CDS 30.0%
AGAATCAAACAATGGAATGA+TGG + chr3_2:60051789-60051808 Msa0414520:CDS 30.0%
TCTTTATAATGTGTTAGCGT+TGG - chr3_2:60051951-60051970 None:intergenic 30.0%
TATGTGTGTGTATATATTGC+TGG - chr3_2:60052068-60052087 None:intergenic 30.0%
CTTGTAGTACTTTAAACGAA+AGG + chr3_2:60052118-60052137 Msa0414520:intron 30.0%
AGCACATTAAACTTCTATGT+AGG + chr3_2:60052240-60052259 Msa0414520:intron 30.0%
TTCTATGTAGGAATTGATGA+TGG + chr3_2:60052252-60052271 Msa0414520:intron 30.0%
AATATTGTCCAATTCTTCTG+TGG - chr3_2:60052354-60052373 None:intergenic 30.0%
GAAGAATTGGACAATATTGT+TGG + chr3_2:60052356-60052375 Msa0414520:three_prime_UTR 30.0%
TATTGTTGGAAAAGATAGAC+TGG + chr3_2:60052370-60052389 Msa0414520:three_prime_UTR 30.0%
GTTTAGGAATATCTGATTCT+TGG - chr3_2:60052397-60052416 None:intergenic 30.0%
TCCTAAACTAAACTTCTTGA+TGG + chr3_2:60052409-60052428 Msa0414520:three_prime_UTR 30.0%
TCTACGAATGATACAATGAT+TGG + chr3_2:60052491-60052510 Msa0414520:three_prime_UTR 30.0%
TGGAAATTACTTGATACCAA+AGG + chr3_2:60052511-60052530 Msa0414520:three_prime_UTR 30.0%
GGAAATTACTTGATACCAAA+GGG + chr3_2:60052512-60052531 Msa0414520:three_prime_UTR 30.0%
AACGTCATCTTAAGAATGAT+GGG + chr3_2:60052612-60052631 Msa0414520:three_prime_UTR 30.0%
AAGGATATGAACTTCAATTC+TGG - chr3_2:60052659-60052678 None:intergenic 30.0%
AAGTTCATATCCTTTAGTAC+AGG + chr3_2:60052665-60052684 Msa0414520:three_prime_UTR 30.0%
TGACTATAATGCTATTAGCT+AGG + chr3_2:60052726-60052745 Msa0414520:three_prime_UTR 30.0%
! ATCAATCTTTTCGATTCCAA+AGG + chr3_2:60052794-60052813 Msa0414520:three_prime_UTR 30.0%
ATCAAGAGATATAACACCTT+TGG - chr3_2:60052813-60052832 None:intergenic 30.0%
! ATGTTTTCTCAAGAATTCAC+GGG - chr3_2:60051265-60051284 None:intergenic 30.0%
! CATGTTTTCTCAAGAATTCA+CGG - chr3_2:60051266-60051285 None:intergenic 30.0%
ATCAATGGCTTCAAGATAAA+AGG + chr3_2:60051430-60051449 Msa0414520:five_prime_UTR 30.0%
GTGTACAACAAATGTAACAA+TGG + chr3_2:60051483-60051502 Msa0414520:five_prime_UTR 30.0%
TACAACAAATGTAACAATGG+TGG + chr3_2:60051486-60051505 Msa0414520:five_prime_UTR 30.0%
ATTGCTACTCAACATTATTG+TGG + chr3_2:60051525-60051544 Msa0414520:five_prime_UTR 30.0%
! GTACTTTGGAAAATGTATGA+AGG + chr3_2:60051581-60051600 Msa0414520:five_prime_UTR 30.0%
TTTGGAAAATGTATGAAGGA+TGG + chr3_2:60051585-60051604 Msa0414520:five_prime_UTR 30.0%
CAAGGTAAAAAATGCAATGA+GGG + chr3_2:60051731-60051750 Msa0414520:CDS 30.0%
GTTTGATTCTCTCTTCAATT+AGG - chr3_2:60051779-60051798 None:intergenic 30.0%
TTGAAGAGAGAATCAAACAA+TGG + chr3_2:60051781-60051800 Msa0414520:CDS 30.0%
AGAATCAAACAATGGAATGA+TGG + chr3_2:60051789-60051808 Msa0414520:CDS 30.0%
TCTTTATAATGTGTTAGCGT+TGG - chr3_2:60051951-60051970 None:intergenic 30.0%
TATGTGTGTGTATATATTGC+TGG - chr3_2:60052068-60052087 None:intergenic 30.0%
CTTGTAGTACTTTAAACGAA+AGG + chr3_2:60052118-60052137 Msa0414520:intron 30.0%
AGCACATTAAACTTCTATGT+AGG + chr3_2:60052240-60052259 Msa0414520:intron 30.0%
TTCTATGTAGGAATTGATGA+TGG + chr3_2:60052252-60052271 Msa0414520:intron 30.0%
AATATTGTCCAATTCTTCTG+TGG - chr3_2:60052354-60052373 None:intergenic 30.0%
GAAGAATTGGACAATATTGT+TGG + chr3_2:60052356-60052375 Msa0414520:three_prime_UTR 30.0%
TATTGTTGGAAAAGATAGAC+TGG + chr3_2:60052370-60052389 Msa0414520:three_prime_UTR 30.0%
GTTTAGGAATATCTGATTCT+TGG - chr3_2:60052397-60052416 None:intergenic 30.0%
TCCTAAACTAAACTTCTTGA+TGG + chr3_2:60052409-60052428 Msa0414520:three_prime_UTR 30.0%
TCTACGAATGATACAATGAT+TGG + chr3_2:60052491-60052510 Msa0414520:three_prime_UTR 30.0%
TGGAAATTACTTGATACCAA+AGG + chr3_2:60052511-60052530 Msa0414520:three_prime_UTR 30.0%
GGAAATTACTTGATACCAAA+GGG + chr3_2:60052512-60052531 Msa0414520:three_prime_UTR 30.0%
AACGTCATCTTAAGAATGAT+GGG + chr3_2:60052612-60052631 Msa0414520:three_prime_UTR 30.0%
AAGGATATGAACTTCAATTC+TGG - chr3_2:60052659-60052678 None:intergenic 30.0%
AAGTTCATATCCTTTAGTAC+AGG + chr3_2:60052665-60052684 Msa0414520:three_prime_UTR 30.0%
TGACTATAATGCTATTAGCT+AGG + chr3_2:60052726-60052745 Msa0414520:three_prime_UTR 30.0%
! ATCAATCTTTTCGATTCCAA+AGG + chr3_2:60052794-60052813 Msa0414520:three_prime_UTR 30.0%
ATCAAGAGATATAACACCTT+TGG - chr3_2:60052813-60052832 None:intergenic 30.0%
CTCAGTAATGTAGCATCTTA+TGG - chr3_2:60051055-60051074 None:intergenic 35.0%
AGATTACCAACTATAGGCAA+TGG - chr3_2:60051114-60051133 None:intergenic 35.0%
TCAGGAAGATTACCAACTAT+AGG - chr3_2:60051120-60051139 None:intergenic 35.0%
ATTTCACTAGCTAGGCTTAT+TGG - chr3_2:60051309-60051328 None:intergenic 35.0%
TTGAGATGATTTCACTAGCT+AGG - chr3_2:60051317-60051336 None:intergenic 35.0%
GCTAGTGAAATCATCTCAAA+TGG + chr3_2:60051318-60051337 Msa0414520:five_prime_UTR 35.0%
! TTTTTCCATTGTTCGCCATA+GGG - chr3_2:60051366-60051385 None:intergenic 35.0%
TAGCAATCCTTACATTGACA+AGG - chr3_2:60051512-60051531 None:intergenic 35.0%
CTGATTATATCCCATGTTTG+AGG + chr3_2:60051678-60051697 Msa0414520:five_prime_UTR 35.0%
AGTCAAGTAACCTCAAACAT+GGG - chr3_2:60051691-60051710 None:intergenic 35.0%
AAGTCAAGTAACCTCAAACA+TGG - chr3_2:60051692-60051711 None:intergenic 35.0%
ACTTAGATGCATGGTCATAA+GGG + chr3_2:60051708-60051727 Msa0414520:exon 35.0%
GCAAGGTAAAAAATGCAATG+AGG + chr3_2:60051730-60051749 Msa0414520:CDS 35.0%
TGGATCAAAGAATGTTGAAG+AGG + chr3_2:60051809-60051828 Msa0414520:CDS 35.0%
TATTGTAAGACTTCACTCAC+CGG + chr3_2:60051911-60051930 Msa0414520:intron 35.0%
GTTGGTTGAAAAAGAAAAGC+CGG - chr3_2:60051933-60051952 None:intergenic 35.0%
GTTAATTTCCTAGCCAAAAG+TGG + chr3_2:60051975-60051994 Msa0414520:intron 35.0%
! ATTCTTTCACTCTCCACTTT+TGG - chr3_2:60051991-60052010 None:intergenic 35.0%
!! TATCAGAATTGGTGTTTTCG+TGG - chr3_2:60052178-60052197 None:intergenic 35.0%
! GCCATCAAGAAGTTTAGTTT+AGG - chr3_2:60052413-60052432 None:intergenic 35.0%
TGTATCATTCGTAGAGACAT+GGG - chr3_2:60052486-60052505 None:intergenic 35.0%
TTGTATCATTCGTAGAGACA+TGG - chr3_2:60052487-60052506 None:intergenic 35.0%
TTGGGAGAAATCCAAAAGTT+TGG + chr3_2:60052564-60052583 Msa0414520:three_prime_UTR 35.0%
!! CGTTCTGGTTTGAATTTGTA+GGG - chr3_2:60052596-60052615 None:intergenic 35.0%
!! ACGTTCTGGTTTGAATTTGT+AGG - chr3_2:60052597-60052616 None:intergenic 35.0%
TCATTCTTAAGATGACGTTC+TGG - chr3_2:60052611-60052630 None:intergenic 35.0%
GAACGTCATCTTAAGAATGA+TGG + chr3_2:60052611-60052630 Msa0414520:three_prime_UTR 35.0%
TCATATCCTTTAGTACAGGA+AGG + chr3_2:60052669-60052688 Msa0414520:three_prime_UTR 35.0%
CTCAGTAATGTAGCATCTTA+TGG - chr3_2:60051055-60051074 None:intergenic 35.0%
AGATTACCAACTATAGGCAA+TGG - chr3_2:60051114-60051133 None:intergenic 35.0%
TCAGGAAGATTACCAACTAT+AGG - chr3_2:60051120-60051139 None:intergenic 35.0%
ATTTCACTAGCTAGGCTTAT+TGG - chr3_2:60051309-60051328 None:intergenic 35.0%
TTGAGATGATTTCACTAGCT+AGG - chr3_2:60051317-60051336 None:intergenic 35.0%
GCTAGTGAAATCATCTCAAA+TGG + chr3_2:60051318-60051337 Msa0414520:five_prime_UTR 35.0%
! TTTTTCCATTGTTCGCCATA+GGG - chr3_2:60051366-60051385 None:intergenic 35.0%
TAGCAATCCTTACATTGACA+AGG - chr3_2:60051512-60051531 None:intergenic 35.0%
CTGATTATATCCCATGTTTG+AGG + chr3_2:60051678-60051697 Msa0414520:five_prime_UTR 35.0%
AGTCAAGTAACCTCAAACAT+GGG - chr3_2:60051691-60051710 None:intergenic 35.0%
AAGTCAAGTAACCTCAAACA+TGG - chr3_2:60051692-60051711 None:intergenic 35.0%
ACTTAGATGCATGGTCATAA+GGG + chr3_2:60051708-60051727 Msa0414520:exon 35.0%
GCAAGGTAAAAAATGCAATG+AGG + chr3_2:60051730-60051749 Msa0414520:CDS 35.0%
TGGATCAAAGAATGTTGAAG+AGG + chr3_2:60051809-60051828 Msa0414520:CDS 35.0%
TATTGTAAGACTTCACTCAC+CGG + chr3_2:60051911-60051930 Msa0414520:intron 35.0%
GTTGGTTGAAAAAGAAAAGC+CGG - chr3_2:60051933-60051952 None:intergenic 35.0%
GTTAATTTCCTAGCCAAAAG+TGG + chr3_2:60051975-60051994 Msa0414520:intron 35.0%
! ATTCTTTCACTCTCCACTTT+TGG - chr3_2:60051991-60052010 None:intergenic 35.0%
!! TATCAGAATTGGTGTTTTCG+TGG - chr3_2:60052178-60052197 None:intergenic 35.0%
! GCCATCAAGAAGTTTAGTTT+AGG - chr3_2:60052413-60052432 None:intergenic 35.0%
TGTATCATTCGTAGAGACAT+GGG - chr3_2:60052486-60052505 None:intergenic 35.0%
TTGTATCATTCGTAGAGACA+TGG - chr3_2:60052487-60052506 None:intergenic 35.0%
TTGGGAGAAATCCAAAAGTT+TGG + chr3_2:60052564-60052583 Msa0414520:three_prime_UTR 35.0%
!! CGTTCTGGTTTGAATTTGTA+GGG - chr3_2:60052596-60052615 None:intergenic 35.0%
!! ACGTTCTGGTTTGAATTTGT+AGG - chr3_2:60052597-60052616 None:intergenic 35.0%
TCATTCTTAAGATGACGTTC+TGG - chr3_2:60052611-60052630 None:intergenic 35.0%
GAACGTCATCTTAAGAATGA+TGG + chr3_2:60052611-60052630 Msa0414520:three_prime_UTR 35.0%
TCATATCCTTTAGTACAGGA+AGG + chr3_2:60052669-60052688 Msa0414520:three_prime_UTR 35.0%
CCAACTATAGGCAATGGTTT+GGG - chr3_2:60051108-60051127 None:intergenic 40.0%
ACCAACTATAGGCAATGGTT+TGG - chr3_2:60051109-60051128 None:intergenic 40.0%
! GGTTTGTTTGCAAGCATTTC+AGG - chr3_2:60051138-60051157 None:intergenic 40.0%
TAGGTGGATACACAAGACTA+TGG + chr3_2:60051164-60051183 Msa0414520:five_prime_UTR 40.0%
TAACATGGACATTTCCTAGG+CGG - chr3_2:60051218-60051237 None:intergenic 40.0%
GGATAACATGGACATTTCCT+AGG - chr3_2:60051221-60051240 None:intergenic 40.0%
GACAAGTAACAGGGATAACA+TGG - chr3_2:60051233-60051252 None:intergenic 40.0%
ACCTCAATTCTTGTACCCTA+TGG + chr3_2:60051348-60051367 Msa0414520:five_prime_UTR 40.0%
! CTTTTTCCATTGTTCGCCAT+AGG - chr3_2:60051367-60051386 None:intergenic 40.0%
AAGAATTGTTCTCTCCACAC+AGG + chr3_2:60051406-60051425 Msa0414520:five_prime_UTR 40.0%
GGTTACTTGACTTAGATGCA+TGG + chr3_2:60051699-60051718 Msa0414520:exon 40.0%
GACTTAGATGCATGGTCATA+AGG + chr3_2:60051707-60051726 Msa0414520:exon 40.0%
!! GTAGGAATTGATGATGGCAA+TGG + chr3_2:60052258-60052277 Msa0414520:intron 40.0%
CAATCCATCCAATGCTTGAA+TGG + chr3_2:60052285-60052304 Msa0414520:exon 40.0%
!! ATGTCCATTCAAGCATTGGA+TGG - chr3_2:60052292-60052311 None:intergenic 40.0%
GCTAATGTCCATTCAAGCAT+TGG - chr3_2:60052296-60052315 None:intergenic 40.0%
!! GTGGCTTTTGGAAATAGTTC+TGG - chr3_2:60052335-60052354 None:intergenic 40.0%
TCCAAAAGCCACAGAAGAAT+TGG + chr3_2:60052343-60052362 Msa0414520:three_prime_UTR 40.0%
! TCCAATTCTTCTGTGGCTTT+TGG - chr3_2:60052347-60052366 None:intergenic 40.0%
GGAACATTGAAAGCCGTTAT+GGG - chr3_2:60052464-60052483 None:intergenic 40.0%
GTATCATTCGTAGAGACATG+GGG - chr3_2:60052485-60052504 None:intergenic 40.0%
AGCAATACATGACTACCCTT+TGG - chr3_2:60052530-60052549 None:intergenic 40.0%
AAGGGTAGTCATGTATTGCT+TGG + chr3_2:60052530-60052549 Msa0414520:three_prime_UTR 40.0%
CATGTATTGCTTGGAAGAAG+TGG + chr3_2:60052539-60052558 Msa0414520:three_prime_UTR 40.0%
! TAGGGTTCAGTCCAAACTTT+TGG - chr3_2:60052578-60052597 None:intergenic 40.0%
CTATTAGCTAGGTTACTCCA+TGG + chr3_2:60052737-60052756 Msa0414520:three_prime_UTR 40.0%
ATCTCTTGATGAGCCACTAA+CGG + chr3_2:60052823-60052842 Msa0414520:three_prime_UTR 40.0%
TACAATTCTGCTGCTAATCG+TGG - chr3_2:60052860-60052879 None:intergenic 40.0%
CCAACTATAGGCAATGGTTT+GGG - chr3_2:60051108-60051127 None:intergenic 40.0%
ACCAACTATAGGCAATGGTT+TGG - chr3_2:60051109-60051128 None:intergenic 40.0%
! GGTTTGTTTGCAAGCATTTC+AGG - chr3_2:60051138-60051157 None:intergenic 40.0%
TAGGTGGATACACAAGACTA+TGG + chr3_2:60051164-60051183 Msa0414520:five_prime_UTR 40.0%
TAACATGGACATTTCCTAGG+CGG - chr3_2:60051218-60051237 None:intergenic 40.0%
GGATAACATGGACATTTCCT+AGG - chr3_2:60051221-60051240 None:intergenic 40.0%
GACAAGTAACAGGGATAACA+TGG - chr3_2:60051233-60051252 None:intergenic 40.0%
ACCTCAATTCTTGTACCCTA+TGG + chr3_2:60051348-60051367 Msa0414520:five_prime_UTR 40.0%
! CTTTTTCCATTGTTCGCCAT+AGG - chr3_2:60051367-60051386 None:intergenic 40.0%
AAGAATTGTTCTCTCCACAC+AGG + chr3_2:60051406-60051425 Msa0414520:five_prime_UTR 40.0%
GGTTACTTGACTTAGATGCA+TGG + chr3_2:60051699-60051718 Msa0414520:exon 40.0%
GACTTAGATGCATGGTCATA+AGG + chr3_2:60051707-60051726 Msa0414520:exon 40.0%
!! GTAGGAATTGATGATGGCAA+TGG + chr3_2:60052258-60052277 Msa0414520:intron 40.0%
CAATCCATCCAATGCTTGAA+TGG + chr3_2:60052285-60052304 Msa0414520:exon 40.0%
!! ATGTCCATTCAAGCATTGGA+TGG - chr3_2:60052292-60052311 None:intergenic 40.0%
GCTAATGTCCATTCAAGCAT+TGG - chr3_2:60052296-60052315 None:intergenic 40.0%
!! GTGGCTTTTGGAAATAGTTC+TGG - chr3_2:60052335-60052354 None:intergenic 40.0%
TCCAAAAGCCACAGAAGAAT+TGG + chr3_2:60052343-60052362 Msa0414520:three_prime_UTR 40.0%
! TCCAATTCTTCTGTGGCTTT+TGG - chr3_2:60052347-60052366 None:intergenic 40.0%
GGAACATTGAAAGCCGTTAT+GGG - chr3_2:60052464-60052483 None:intergenic 40.0%
GTATCATTCGTAGAGACATG+GGG - chr3_2:60052485-60052504 None:intergenic 40.0%
AGCAATACATGACTACCCTT+TGG - chr3_2:60052530-60052549 None:intergenic 40.0%
AAGGGTAGTCATGTATTGCT+TGG + chr3_2:60052530-60052549 Msa0414520:three_prime_UTR 40.0%
CATGTATTGCTTGGAAGAAG+TGG + chr3_2:60052539-60052558 Msa0414520:three_prime_UTR 40.0%
! TAGGGTTCAGTCCAAACTTT+TGG - chr3_2:60052578-60052597 None:intergenic 40.0%
CTATTAGCTAGGTTACTCCA+TGG + chr3_2:60052737-60052756 Msa0414520:three_prime_UTR 40.0%
ATCTCTTGATGAGCCACTAA+CGG + chr3_2:60052823-60052842 Msa0414520:three_prime_UTR 40.0%
TACAATTCTGCTGCTAATCG+TGG - chr3_2:60052860-60052879 None:intergenic 40.0%
! GGGGGAAGTTTAGGTTTGTT+AGG - chr3_2:60051081-60051100 None:intergenic 45.0%
AACAAACCTAAACTTCCCCC+TGG + chr3_2:60051081-60051100 Msa0414520:five_prime_UTR 45.0%
CCCAAACCATTGCCTATAGT+TGG + chr3_2:60051105-60051124 Msa0414520:five_prime_UTR 45.0%
TTGCAAACAAACCTGCAGCT+AGG + chr3_2:60051145-60051164 Msa0414520:five_prime_UTR 45.0%
CAATGGAGGGACAAGTAACA+GGG - chr3_2:60051242-60051261 None:intergenic 45.0%
AAGAATTCACGGGCAATGGA+GGG - chr3_2:60051255-60051274 None:intergenic 45.0%
TCTCAAGAATTCACGGGCAA+TGG - chr3_2:60051259-60051278 None:intergenic 45.0%
GCCATAGGGTACAAGAATTG+AGG - chr3_2:60051352-60051371 None:intergenic 45.0%
TTGTACCCTATGGCGAACAA+TGG + chr3_2:60051358-60051377 Msa0414520:five_prime_UTR 45.0%
!! ATGGTGGCCTTGTCAATGTA+AGG + chr3_2:60051502-60051521 Msa0414520:five_prime_UTR 45.0%
!! TTCACTCTCCACTTTTGGCT+AGG - chr3_2:60051986-60052005 None:intergenic 45.0%
!! GGAATTGATGATGGCAATGG+TGG + chr3_2:60052261-60052280 Msa0414520:intron 45.0%
TTTCTGCCTGCATCCCATAA+CGG + chr3_2:60052448-60052467 Msa0414520:three_prime_UTR 45.0%
GGGAACATTGAAAGCCGTTA+TGG - chr3_2:60052465-60052484 None:intergenic 45.0%
TTGCTTGGAAGAAGTGGTCT+TGG + chr3_2:60052545-60052564 Msa0414520:three_prime_UTR 45.0%
TGCTTGGAAGAAGTGGTCTT+GGG + chr3_2:60052546-60052565 Msa0414520:three_prime_UTR 45.0%
! GGGGGAAGTTTAGGTTTGTT+AGG - chr3_2:60051081-60051100 None:intergenic 45.0%
AACAAACCTAAACTTCCCCC+TGG + chr3_2:60051081-60051100 Msa0414520:five_prime_UTR 45.0%
CCCAAACCATTGCCTATAGT+TGG + chr3_2:60051105-60051124 Msa0414520:five_prime_UTR 45.0%
TTGCAAACAAACCTGCAGCT+AGG + chr3_2:60051145-60051164 Msa0414520:five_prime_UTR 45.0%
CAATGGAGGGACAAGTAACA+GGG - chr3_2:60051242-60051261 None:intergenic 45.0%
AAGAATTCACGGGCAATGGA+GGG - chr3_2:60051255-60051274 None:intergenic 45.0%
TCTCAAGAATTCACGGGCAA+TGG - chr3_2:60051259-60051278 None:intergenic 45.0%
GCCATAGGGTACAAGAATTG+AGG - chr3_2:60051352-60051371 None:intergenic 45.0%
TTGTACCCTATGGCGAACAA+TGG + chr3_2:60051358-60051377 Msa0414520:five_prime_UTR 45.0%
!! ATGGTGGCCTTGTCAATGTA+AGG + chr3_2:60051502-60051521 Msa0414520:five_prime_UTR 45.0%
!! TTCACTCTCCACTTTTGGCT+AGG - chr3_2:60051986-60052005 None:intergenic 45.0%
!! GGAATTGATGATGGCAATGG+TGG + chr3_2:60052261-60052280 Msa0414520:intron 45.0%
TTTCTGCCTGCATCCCATAA+CGG + chr3_2:60052448-60052467 Msa0414520:three_prime_UTR 45.0%
GGGAACATTGAAAGCCGTTA+TGG - chr3_2:60052465-60052484 None:intergenic 45.0%
TTGCTTGGAAGAAGTGGTCT+TGG + chr3_2:60052545-60052564 Msa0414520:three_prime_UTR 45.0%
TGCTTGGAAGAAGTGGTCTT+GGG + chr3_2:60052546-60052565 Msa0414520:three_prime_UTR 45.0%
! TAGGCAATGGTTTGGGACCA+GGG - chr3_2:60051101-60051120 None:intergenic 50.0%
! ATAGGCAATGGTTTGGGACC+AGG - chr3_2:60051102-60051121 None:intergenic 50.0%
CAAACAAACCTGCAGCTAGG+TGG + chr3_2:60051148-60051167 Msa0414520:five_prime_UTR 50.0%
TTGTGTATCCACCTAGCTGC+AGG - chr3_2:60051159-60051178 None:intergenic 50.0%
GCAATGGAGGGACAAGTAAC+AGG - chr3_2:60051243-60051262 None:intergenic 50.0%
CAAGAATTCACGGGCAATGG+AGG - chr3_2:60051256-60051275 None:intergenic 50.0%
TCTCTCCACACAGGCATCAA+TGG + chr3_2:60051415-60051434 Msa0414520:five_prime_UTR 50.0%
TGAAGCCATTGATGCCTGTG+TGG - chr3_2:60051423-60051442 None:intergenic 50.0%
GATGCATGGTCATAAGGGCA+AGG + chr3_2:60051713-60051732 Msa0414520:exon 50.0%
TGAAAGCCGTTATGGGATGC+AGG - chr3_2:60052457-60052476 None:intergenic 50.0%
TCCTTTAGTACAGGAAGGCG+TGG + chr3_2:60052674-60052693 Msa0414520:three_prime_UTR 50.0%
ACCACGCCTTCCTGTACTAA+AGG - chr3_2:60052678-60052697 None:intergenic 50.0%
GGTTGTCCTGGTATCATGCT+TGG + chr3_2:60052695-60052714 Msa0414520:three_prime_UTR 50.0%
GGTTACTCCATGGCTTCACT+TGG + chr3_2:60052747-60052766 Msa0414520:three_prime_UTR 50.0%
! TAGGCAATGGTTTGGGACCA+GGG - chr3_2:60051101-60051120 None:intergenic 50.0%
! ATAGGCAATGGTTTGGGACC+AGG - chr3_2:60051102-60051121 None:intergenic 50.0%
CAAACAAACCTGCAGCTAGG+TGG + chr3_2:60051148-60051167 Msa0414520:five_prime_UTR 50.0%
TTGTGTATCCACCTAGCTGC+AGG - chr3_2:60051159-60051178 None:intergenic 50.0%
GCAATGGAGGGACAAGTAAC+AGG - chr3_2:60051243-60051262 None:intergenic 50.0%
CAAGAATTCACGGGCAATGG+AGG - chr3_2:60051256-60051275 None:intergenic 50.0%
TCTCTCCACACAGGCATCAA+TGG + chr3_2:60051415-60051434 Msa0414520:five_prime_UTR 50.0%
TGAAGCCATTGATGCCTGTG+TGG - chr3_2:60051423-60051442 None:intergenic 50.0%
GATGCATGGTCATAAGGGCA+AGG + chr3_2:60051713-60051732 Msa0414520:exon 50.0%
TGAAAGCCGTTATGGGATGC+AGG - chr3_2:60052457-60052476 None:intergenic 50.0%
TCCTTTAGTACAGGAAGGCG+TGG + chr3_2:60052674-60052693 Msa0414520:three_prime_UTR 50.0%
ACCACGCCTTCCTGTACTAA+AGG - chr3_2:60052678-60052697 None:intergenic 50.0%
GGTTGTCCTGGTATCATGCT+TGG + chr3_2:60052695-60052714 Msa0414520:three_prime_UTR 50.0%
GGTTACTCCATGGCTTCACT+TGG + chr3_2:60052747-60052766 Msa0414520:three_prime_UTR 50.0%
TTGGGACCAGGGGGAAGTTT+AGG - chr3_2:60051090-60051109 None:intergenic 55.0%
! AGGCAATGGTTTGGGACCAG+GGG - chr3_2:60051100-60051119 None:intergenic 55.0%
GAAATAGCGCGTATCCGCCT+AGG + chr3_2:60051201-60051220 Msa0414520:five_prime_UTR 55.0%
GTGGAGCCAAGCATGATACC+AGG - chr3_2:60052704-60052723 None:intergenic 55.0%
GTGCACTCCAAGTGAAGCCA+TGG - chr3_2:60052757-60052776 None:intergenic 55.0%
GGCTTTGCTGCAACCGTTAG+TGG - chr3_2:60052839-60052858 None:intergenic 55.0%
TTGGGACCAGGGGGAAGTTT+AGG - chr3_2:60051090-60051109 None:intergenic 55.0%
! AGGCAATGGTTTGGGACCAG+GGG - chr3_2:60051100-60051119 None:intergenic 55.0%
GAAATAGCGCGTATCCGCCT+AGG + chr3_2:60051201-60051220 Msa0414520:five_prime_UTR 55.0%
GTGGAGCCAAGCATGATACC+AGG - chr3_2:60052704-60052723 None:intergenic 55.0%
GTGCACTCCAAGTGAAGCCA+TGG - chr3_2:60052757-60052776 None:intergenic 55.0%
GGCTTTGCTGCAACCGTTAG+TGG - chr3_2:60052839-60052858 None:intergenic 55.0%
! GGCAATGGTTTGGGACCAGG+GGG - chr3_2:60051099-60051118 None:intergenic 60.0%
! ACAGGAAGGCGTGGTTGTCC+TGG + chr3_2:60052683-60052702 Msa0414520:three_prime_UTR 60.0%
! GGCAATGGTTTGGGACCAGG+GGG - chr3_2:60051099-60051118 None:intergenic 60.0%
! ACAGGAAGGCGTGGTTGTCC+TGG + chr3_2:60052683-60052702 Msa0414520:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 60051027 60052914 60051027 ID=Msa0414520;Name=Msa0414520
chr3_2 mRNA 60051027 60052914 60051027 ID=Msa0414520-mRNA-1;Parent=Msa0414520;Name=Msa0414520-mRNA-1;_AED=0.04;_eAED=0.04;_QI=687|1|1|1|0|0|2|611|80
chr3_2 exon 60051027 60051914 60051027 ID=Msa0414520-mRNA-1:exon:12494;Parent=Msa0414520-mRNA-1
chr3_2 exon 60052262 60052914 60052262 ID=Msa0414520-mRNA-1:exon:12495;Parent=Msa0414520-mRNA-1
chr3_2 five_prime_UTR 60051027 60051713 60051027 ID=Msa0414520-mRNA-1:five_prime_utr;Parent=Msa0414520-mRNA-1
chr3_2 CDS 60051714 60051914 60051714 ID=Msa0414520-mRNA-1:cds;Parent=Msa0414520-mRNA-1
chr3_2 CDS 60052262 60052303 60052262 ID=Msa0414520-mRNA-1:cds;Parent=Msa0414520-mRNA-1
chr3_2 three_prime_UTR 60052304 60052914 60052304 ID=Msa0414520-mRNA-1:three_prime_utr;Parent=Msa0414520-mRNA-1
Gene Sequence

>Msa0414520

ATGCATGGTCATAAGGGCAAGGTAAAAAATGCAATGAGGGCAATCAACAATTATCATAATTCCCTAATTGAAGAGAGAATCAAACAATGGAATGATGGATCAAAGAATGTTGAAGAGGACTTGCTAGATGTTTTGATCACGCTGAAAGATGTCAACAATAATCCGTTATTAACAATGAAGGAAATCAAGGCACAAGTTATTGAATTGATGATGGCAATGGTGGACAATCCATCCAATGCTTGA
Protein sequence

>Msa0414520

MHGHKGKVKNAMRAINNYHNSLIEERIKQWNDGSKNVEEDLLDVLITLKDVNNNPLLTMKEIKAQVIELMMAMVDNPSNA*