AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0506090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506090 MtrunA17_Chr3g0107541 79.356 528 109 0 1 528 6 533 0.0 853
Msa0506090 MtrunA17_Chr3g0107611 69.231 533 158 3 1 527 6 538 0.0 774
Msa0506090 MtrunA17_Chr8g0370651 58.733 521 212 1 11 528 10 530 0.0 645
Msa0506090 MtrunA17_Chr8g0370641 58.733 521 208 3 11 528 10 526 0.0 638
Msa0506090 MtrunA17_Chr3g0107561 90.823 316 29 0 1 316 1 316 0.0 607
Msa0506090 MtrunA17_Chr3g0105751 73.832 321 82 2 1 319 1 321 7.60e-176 501
Msa0506090 MtrunA17_Chr3g0107551 93.301 209 14 0 320 528 4 212 3.14e-140 403
Msa0506090 MtrunA17_Chr3g0105761 70.000 210 61 1 322 531 1 208 1.17e-100 302
Msa0506090 MtrunA17_Chr7g0254641 33.528 513 321 9 28 527 16 521 1.62e-90 287
Msa0506090 MtrunA17_Chr8g0344151 30.426 516 342 11 17 528 10 512 2.71e-75 247
Msa0506090 MtrunA17_Chr8g0344191 30.095 525 347 12 9 526 33 544 4.62e-74 244
Msa0506090 MtrunA17_Chr3g0107581 72.000 150 36 2 75 221 1 147 2.47e-72 227
Msa0506090 MtrunA17_Chr3g0094171 28.850 513 343 7 19 526 18 513 2.99e-72 239
Msa0506090 MtrunA17_Chr3g0086651 31.818 484 314 9 54 530 41 515 2.51e-71 236
Msa0506090 MtrunA17_Chr8g0344181 30.385 520 339 12 18 528 9 514 1.60e-70 234
Msa0506090 MtrunA17_Chr3g0086661 31.818 484 314 9 54 530 41 515 9.21e-70 232
Msa0506090 MtrunA17_Chr2g0310381 29.474 475 313 9 37 506 21 478 1.33e-69 231
Msa0506090 MtrunA17_Chr2g0310391 28.889 450 301 7 41 487 24 457 1.13e-68 229
Msa0506090 MtrunA17_Chr3g0094231 28.395 486 332 8 43 526 34 505 2.71e-68 228
Msa0506090 MtrunA17_Chr8g0382901 30.599 451 293 8 41 489 488 920 3.24e-68 236
Msa0506090 MtrunA17_Chr8g0382901 29.778 450 283 7 41 489 24 441 1.49e-64 226
Msa0506090 MtrunA17_Chr4g0061381 30.785 484 310 11 54 526 40 509 8.95e-68 227
Msa0506090 MtrunA17_Chr6g0484811 29.602 527 342 12 10 528 1 506 3.16e-67 225
Msa0506090 MtrunA17_Chr6g0484841 30.128 468 292 9 34 489 26 470 2.30e-66 223
Msa0506090 MtrunA17_Chr3g0086691 29.607 483 326 8 54 530 41 515 7.11e-66 222
Msa0506090 MtrunA17_Chr8g0390881 28.517 526 341 12 14 528 4 505 5.64e-64 217
Msa0506090 MtrunA17_Chr8g0372341 55.000 200 87 1 11 207 10 209 1.17e-63 206
Msa0506090 MtrunA17_Chr5g0403351 29.167 480 313 9 19 489 8 469 2.19e-63 215
Msa0506090 MtrunA17_Chr3g0116681 28.906 512 336 13 16 519 11 502 2.30e-63 215
Msa0506090 MtrunA17_Chr1g0200961 28.125 480 327 5 20 496 6 470 5.83e-63 214
Msa0506090 MtrunA17_Chr7g0255531 27.660 517 342 11 19 527 11 503 7.38e-63 214
Msa0506090 MtrunA17_Chr8g0372591 64.583 144 50 1 319 461 1 144 2.14e-62 201
Msa0506090 MtrunA17_Chr5g0430031 27.912 498 315 11 19 500 12 481 3.47e-61 209
Msa0506090 MtrunA17_Chr4g0035921 27.767 533 339 14 18 530 10 516 3.99e-61 209
Msa0506090 MtrunA17_Chr4g0057001 28.657 499 323 12 34 522 40 515 6.31e-61 209
Msa0506090 MtrunA17_Chr8g0339311 29.112 529 353 9 14 526 5 527 1.31e-60 208
Msa0506090 MtrunA17_Chr6g0466331 29.622 476 305 12 24 489 12 467 4.72e-60 206
Msa0506090 MtrunA17_Chr5g0430131 28.485 495 317 11 19 500 10 480 1.94e-59 204
Msa0506090 MtrunA17_Chr6g0465511 29.202 476 307 10 24 489 12 467 2.17e-59 204
Msa0506090 MtrunA17_Chr3g0101731 27.615 478 317 11 19 489 12 467 2.78e-59 204
Msa0506090 MtrunA17_Chr2g0304871 28.980 490 333 8 44 525 36 518 2.80e-59 204
Msa0506090 MtrunA17_Chr5g0430101 28.425 489 322 10 19 500 11 478 3.68e-59 204
Msa0506090 MtrunA17_Chr3g0101611 31.034 464 279 12 40 489 33 469 6.71e-59 203
Msa0506090 MtrunA17_Chr3g0101711 29.150 494 306 12 13 489 4 470 7.91e-59 203
Msa0506090 MtrunA17_Chr3g0116741 28.364 483 316 9 20 494 26 486 9.76e-59 203
Msa0506090 MtrunA17_Chr8g0361471 29.412 476 306 11 24 489 12 467 1.29e-58 202
Msa0506090 MtrunA17_Chr1g0174441 28.247 485 320 9 19 489 25 495 3.03e-58 202
Msa0506090 MtrunA17_Chr8g0372251 27.536 483 319 10 41 512 31 493 1.39e-57 200
Msa0506090 MtrunA17_Chr5g0430081 28.858 499 311 12 18 500 9 479 1.45e-57 199
Msa0506090 MtrunA17_Chr5g0430091 28.629 496 316 11 19 500 10 481 1.55e-57 199
Msa0506090 MtrunA17_Chr8g0339331 28.740 508 322 13 41 528 34 521 2.30e-57 199
Msa0506090 MtrunA17_Chr4g0047661 27.290 513 337 11 11 506 9 502 3.10e-57 199
Msa0506090 MtrunA17_Chr3g0101631 29.400 483 305 10 15 489 8 462 5.24e-57 198
Msa0506090 MtrunA17_Chr7g0235551 27.846 492 326 11 9 489 1 474 5.76e-57 198
Msa0506090 MtrunA17_Chr4g0053621 26.667 480 322 8 19 489 5 463 6.20e-57 198
Msa0506090 MtrunA17_Chr3g0101671 29.436 479 311 11 20 489 11 471 7.94e-57 197
Msa0506090 MtrunA17_Chr5g0405001 27.835 485 314 11 41 512 40 501 9.84e-57 197
Msa0506090 MtrunA17_Chr3g0084921 30.196 510 307 17 19 511 14 491 1.93e-56 197
Msa0506090 MtrunA17_Chr6g0451751 27.756 508 335 12 39 527 35 529 2.90e-56 197
Msa0506090 MtrunA17_Chr3g0101601 28.926 484 299 12 19 489 12 463 3.36e-56 196
Msa0506090 MtrunA17_Chr8g0356001 26.834 518 353 11 9 516 1 502 5.24e-56 196
Msa0506090 MtrunA17_Chr4g0047641 28.425 489 325 11 6 489 14 482 6.21e-56 196
Msa0506090 MtrunA17_Chr5g0403331 29.295 454 296 10 44 489 34 470 7.67e-56 195
Msa0506090 MtrunA17_Chr5g0445441 28.059 474 319 9 19 489 53 507 8.76e-56 196
Msa0506090 MtrunA17_Chr3g0101701 29.167 456 290 11 45 489 38 471 8.94e-56 195
Msa0506090 MtrunA17_Chr7g0265611 28.101 516 325 13 24 529 29 508 9.57e-56 195
Msa0506090 MtrunA17_Chr4g0058201 27.699 491 321 10 41 519 24 492 1.42e-55 194
Msa0506090 MtrunA17_Chr7g0246221 27.731 476 325 6 19 489 8 469 2.02e-55 194
Msa0506090 MtrunA17_Chr3g0101661 27.950 483 312 10 19 489 12 470 3.32e-55 193
Msa0506090 MtrunA17_Chr6g0472311 28.200 500 328 11 19 502 11 495 4.76e-55 193
Msa0506090 MtrunA17_Chr5g0431671 29.360 453 289 8 45 489 38 467 4.85e-55 192
Msa0506090 MtrunA17_Chr6g0458561 29.459 499 315 13 46 527 55 533 6.11e-55 193
Msa0506090 MtrunA17_Chr5g0395331 27.386 482 329 6 8 489 10 470 6.13e-55 192
Msa0506090 MtrunA17_Chr1g0174461 26.786 504 341 10 13 511 5 485 1.12e-54 192
Msa0506090 MtrunA17_Chr4g0058231 25.349 501 335 11 19 506 9 483 1.58e-54 191
Msa0506090 MtrunA17_Chr1g0176831 26.947 475 333 5 15 489 33 493 1.70e-54 191
Msa0506090 MtrunA17_Chr4g0047631 26.758 512 340 10 10 509 9 497 2.27e-54 191
Msa0506090 MtrunA17_Chr6g0451781 28.016 489 330 10 52 526 81 561 2.74e-54 192
Msa0506090 MtrunA17_Chr4g0058281 26.033 484 338 9 11 489 11 479 2.87e-54 191
Msa0506090 MtrunA17_Chr3g0101691 27.755 490 319 11 13 489 4 471 2.92e-54 191
Msa0506090 MtrunA17_Chr5g0403321 28.070 456 302 8 44 489 33 472 3.05e-54 191
Msa0506090 MtrunA17_Chr1g0162811 29.193 483 312 12 15 489 6 466 3.28e-54 191
Msa0506090 MtrunA17_Chr5g0431641 28.392 479 319 10 15 489 8 466 3.35e-54 190
Msa0506090 MtrunA17_Chr3g0101821 27.273 484 324 8 21 496 11 474 3.70e-54 190
Msa0506090 MtrunA17_Chr4g0047691 27.613 507 339 11 6 506 16 500 5.34e-54 190
Msa0506090 MtrunA17_Chr5g0401681 26.587 504 333 12 26 523 13 485 7.10e-54 189
Msa0506090 MtrunA17_Chr4g0030711 28.166 458 288 11 75 511 64 501 9.35e-54 190
Msa0506090 MtrunA17_Chr4g0046631 28.310 491 328 12 46 526 47 523 1.29e-53 189
Msa0506090 MtrunA17_Chr4g0030701 27.044 477 323 9 46 511 36 498 2.73e-53 188
Msa0506090 MtrunA17_Chr8g0355961 27.613 507 342 9 9 506 1 491 2.96e-53 188
Msa0506090 MtrunA17_Chr3g0101621 28.364 483 302 11 19 489 7 457 3.72e-53 187
Msa0506090 MtrunA17_Chr5g0395321 26.860 484 309 9 19 489 12 463 4.76e-53 188
Msa0506090 MtrunA17_Chr2g0314721 26.316 475 336 5 15 489 14 474 6.31e-53 187
Msa0506090 MtrunA17_Chr4g0056951 27.527 465 323 7 61 522 57 510 6.74e-53 187
Msa0506090 MtrunA17_Chr5g0446161 29.175 473 294 12 28 489 24 466 9.02e-53 186
Msa0506090 MtrunA17_Chr5g0431501 26.639 488 330 11 45 521 33 503 9.27e-53 187
Msa0506090 MtrunA17_Chr5g0431461 26.639 488 330 11 45 521 33 503 9.27e-53 187
Msa0506090 MtrunA17_Chr5g0445461 28.361 476 315 10 19 489 12 466 9.59e-53 186
Msa0506090 MtrunA17_Chr5g0446151 31.042 451 281 12 45 489 41 467 1.32e-52 186
Msa0506090 MtrunA17_Chr3g0101651 28.571 455 294 9 45 489 38 471 1.39e-52 186
Msa0506090 MtrunA17_Chr7g0258221 27.203 522 354 12 9 521 1 505 1.52e-52 186
Msa0506090 MtrunA17_Chr5g0445451 27.579 475 320 7 19 489 12 466 2.01e-52 186
Msa0506090 MtrunA17_Chr2g0314731 26.347 501 340 8 15 513 3 476 2.70e-52 185
Msa0506090 MtrunA17_Chr1g0174451 26.369 493 334 10 46 530 37 508 4.31e-52 185
Msa0506090 MtrunA17_Chr7g0224551 29.817 493 297 16 20 490 4 469 4.91e-52 185
Msa0506090 MtrunA17_Chr4g0052851 27.974 454 290 10 41 489 29 450 5.98e-52 184
Msa0506090 MtrunA17_Chr5g0445381 28.427 496 316 14 6 489 29 497 6.91e-52 185
Msa0506090 MtrunA17_Chr3g0101761 28.067 481 316 9 19 489 7 467 7.96e-52 184
Msa0506090 MtrunA17_Chr4g0039901 27.049 488 332 12 44 527 34 501 8.94e-52 184
Msa0506090 MtrunA17_Chr4g0039391 27.932 469 309 12 62 520 50 499 1.24e-51 184
Msa0506090 MtrunA17_Chr3g0101751 28.252 492 326 9 5 489 3 474 1.59e-51 183
Msa0506090 MtrunA17_Chr4g0008101 26.679 536 348 13 18 527 13 529 1.82e-51 184
Msa0506090 MtrunA17_Chr8g0362481 26.077 441 311 8 87 521 5 436 3.37e-51 181
Msa0506090 MtrunA17_Chr5g0445531 28.384 458 303 10 36 489 29 465 5.68e-51 182
Msa0506090 MtrunA17_Chr1g0174481 27.579 475 328 11 19 489 6 468 9.11e-51 181
Msa0506090 MtrunA17_Chr1g0174471 26.800 500 335 12 19 511 26 501 1.60e-50 181
Msa0506090 MtrunA17_Chr6g0466901 26.628 522 357 10 19 526 12 521 1.61e-50 181
Msa0506090 MtrunA17_Chr3g0101801 27.699 491 325 11 7 489 6 474 1.86e-50 181
Msa0506090 MtrunA17_Chr2g0296651 26.523 509 342 13 19 520 7 490 1.94e-50 180
Msa0506090 MtrunA17_Chr5g0401691 25.667 487 337 10 4 489 14 476 2.20e-50 180
Msa0506090 MtrunA17_Chr4g0024771 27.027 481 321 13 14 489 11 466 3.59e-50 179
Msa0506090 MtrunA17_Chr5g0430111 28.736 435 281 11 19 443 12 427 4.50e-50 177
Msa0506090 MtrunA17_Chr1g0198191 25.794 504 344 10 26 520 33 515 7.14e-50 179
Msa0506090 MtrunA17_Chr3g0101811 26.815 496 318 12 19 489 7 482 7.32e-50 179
Msa0506090 MtrunA17_Chr1g0162801 28.750 480 311 11 20 489 11 469 9.33e-50 179
Msa0506090 MtrunA17_Chr5g0395381 26.115 471 300 7 19 489 16 438 1.01e-49 177
Msa0506090 MtrunA17_Chr7g0224561 29.412 493 299 16 20 490 4 469 1.42e-49 178
Msa0506090 MtrunA17_Chr3g0082701 28.571 525 350 13 20 527 14 530 1.52e-49 178
Msa0506090 MtrunA17_Chr1g0205361 25.478 471 335 7 20 489 8 463 1.70e-49 177
Msa0506090 MtrunA17_Chr3g0101721 26.383 470 320 9 27 489 19 469 2.26e-49 177
Msa0506090 MtrunA17_Chr6g0451691 26.969 508 337 12 41 526 37 532 2.41e-49 178
Msa0506090 MtrunA17_Chr4g0074581 27.027 518 338 9 2 494 14 516 3.04e-49 178
Msa0506090 MtrunA17_Chr1g0207841 26.906 446 287 9 85 511 75 500 3.61e-49 177
Msa0506090 MtrunA17_Chr6g0463801 27.646 463 303 10 45 500 37 474 4.29e-49 177
Msa0506090 MtrunA17_Chr5g0432751 26.815 496 327 13 41 520 29 504 5.18e-49 176
Msa0506090 MtrunA17_Chr7g0246131 27.594 453 308 6 44 490 33 471 5.40e-49 176
Msa0506090 MtrunA17_Chr6g0466941 26.806 526 352 13 19 526 12 522 7.33e-49 176
Msa0506090 MtrunA17_Chr7g0218611 25.934 482 335 11 33 509 21 485 7.38e-49 176
Msa0506090 MtrunA17_Chr3g0101831 27.607 489 323 10 19 496 7 475 1.14e-48 176
Msa0506090 MtrunA17_Chr1g0167321 28.750 480 311 12 20 489 8 466 1.43e-48 175
Msa0506090 MtrunA17_Chr1g0205371 25.847 472 334 6 19 489 8 464 2.06e-48 175
Msa0506090 MtrunA17_Chr8g0377341 27.455 499 318 15 9 489 23 495 2.26e-48 175
Msa0506090 MtrunA17_Chr4g0052881 27.831 521 331 14 10 520 6 491 3.07e-48 174
Msa0506090 MtrunA17_Chr7g0218601 26.316 494 334 14 22 509 15 484 3.10e-48 174
Msa0506090 MtrunA17_Chr5g0445421 26.860 484 295 11 15 489 86 519 3.85e-48 175
Msa0506090 MtrunA17_Chr7g0246151 27.670 412 285 4 82 490 68 469 4.52e-48 174
Msa0506090 MtrunA17_Chr6g0451741 25.941 505 349 9 41 528 56 552 5.41e-48 174
Msa0506090 MtrunA17_Chr6g0451641 27.619 525 340 13 19 526 20 521 7.91e-48 174
Msa0506090 MtrunA17_Chr4g0076161 25.761 493 338 9 1 489 1 469 8.22e-48 173
Msa0506090 MtrunA17_Chr8g0372331 58.140 129 54 0 400 528 3 131 8.66e-48 162
Msa0506090 MtrunA17_Chr1g0160851 24.948 481 337 10 14 489 2 463 1.94e-47 172
Msa0506090 MtrunA17_Chr5g0419451 27.540 443 299 10 51 489 62 486 2.46e-47 172
Msa0506090 MtrunA17_Chr4g0058261 25.988 481 324 12 47 513 64 526 3.32e-47 172
Msa0506090 MtrunA17_Chr8g0362701 26.157 432 292 8 87 511 74 485 4.57e-47 171
Msa0506090 MtrunA17_Chr3g0101581 27.063 521 319 18 20 520 13 492 4.79e-47 171
Msa0506090 MtrunA17_Chr4g0058191 24.390 492 348 11 32 519 16 487 6.35e-47 170
Msa0506090 MtrunA17_Chr1g0156101 25.572 481 337 9 34 503 21 491 1.21e-46 170
Msa0506090 MtrunA17_Chr3g0101571 26.556 482 322 15 44 520 35 489 1.54e-46 169
Msa0506090 MtrunA17_Chr1g0213671 27.176 471 317 10 27 489 21 473 2.38e-46 169
Msa0506090 MtrunA17_Chr4g0052861 26.694 487 336 11 36 520 23 490 3.08e-46 169
Msa0506090 MtrunA17_Chr4g0020041 26.694 487 325 11 13 489 4 468 3.98e-46 169
Msa0506090 MtrunA17_Chr5g0431511 25.462 487 337 10 45 521 33 503 4.41e-46 168
Msa0506090 MtrunA17_Chr8g0371761 50.336 149 59 2 340 477 1 145 4.81e-46 158
Msa0506090 MtrunA17_Chr1g0200951 28.544 515 337 15 19 521 34 529 5.21e-46 169
Msa0506090 MtrunA17_Chr7g0246121 28.431 408 283 3 82 489 68 466 5.50e-46 168
Msa0506090 MtrunA17_Chr8g0346261 27.651 481 320 15 47 520 86 545 4.13e-45 166
Msa0506090 MtrunA17_Chr7g0246181 28.117 409 287 3 82 490 68 469 4.50e-44 163
Msa0506090 MtrunA17_Chr1g0164211 26.222 450 313 6 42 489 28 460 4.51e-44 162
Msa0506090 MtrunA17_Chr4g0011901 26.490 453 306 10 46 490 30 463 5.34e-44 162
Msa0506090 MtrunA17_Chr8g0357421 27.027 481 321 10 19 489 7 467 5.81e-44 162
Msa0506090 MtrunA17_Chr1g0197851 26.151 478 333 8 21 495 7 467 1.26e-43 161
Msa0506090 MtrunA17_Chr1g0197891 26.549 452 315 7 44 495 33 467 1.30e-43 161
Msa0506090 MtrunA17_Chr1g0197881 26.205 477 332 8 19 495 10 466 3.72e-43 160
Msa0506090 MtrunA17_Chr4g0011921 25.926 486 332 10 6 489 3 462 4.29e-43 160
Msa0506090 MtrunA17_Chr2g0296661 27.189 434 290 9 81 506 65 480 1.02e-42 159
Msa0506090 MtrunA17_Chr6g0463791 24.583 480 332 9 19 489 7 465 2.46e-42 158
Msa0506090 MtrunA17_Chr8g0357431 26.543 486 318 10 19 489 7 468 2.47e-42 158
Msa0506090 MtrunA17_Chr3g0101741 26.034 411 276 8 85 490 3 390 4.75e-41 153
Msa0506090 MtrunA17_Chr1g0197871 25.942 451 305 8 45 489 34 461 1.11e-40 153
Msa0506090 MtrunA17_Chr2g0280261 26.293 464 308 9 45 500 34 471 8.21e-40 151
Msa0506090 MtrunA17_Chr7g0258211 26.540 422 274 10 85 489 76 478 4.25e-39 149
Msa0506090 MtrunA17_Chr5g0419691 25.778 450 311 9 46 489 30 462 7.84e-39 148
Msa0506090 MtrunA17_Chr1g0156081 25.212 472 328 10 46 504 57 516 9.27e-39 149
Msa0506090 MtrunA17_Chr4g0017411 25.567 485 325 15 41 520 26 479 1.25e-38 147
Msa0506090 MtrunA17_Chr4g0046321 27.766 461 289 15 46 487 35 470 1.49e-38 148
Msa0506090 MtrunA17_Chr4g0011961 25.000 492 328 13 6 489 3 461 2.35e-38 147
Msa0506090 MtrunA17_Chr5g0430071 29.643 280 186 5 228 500 59 334 6.19e-38 143
Msa0506090 MtrunA17_Chr5g0406651 24.619 459 329 9 34 489 19 463 1.69e-37 144
Msa0506090 MtrunA17_Chr4g0046351 26.566 463 292 14 46 487 35 470 3.05e-37 144
Msa0506090 MtrunA17_Chr4g0011981 25.551 454 313 11 43 489 27 462 3.52e-37 143
Msa0506090 MtrunA17_Chr8g0351801 25.641 429 280 10 85 489 71 484 4.27e-37 144
Msa0506090 MtrunA17_Chr2g0310351 36.527 167 103 1 321 487 1 164 4.57e-37 135
Msa0506090 MtrunA17_Chr4g0046331 26.724 464 292 15 46 487 35 472 8.01e-37 143
Msa0506090 MtrunA17_Chr4g0011871 24.667 450 317 9 46 489 30 463 3.58e-36 140
Msa0506090 MtrunA17_Chr1g0210091 23.982 442 318 11 75 509 93 523 4.96e-36 141
Msa0506090 MtrunA17_Chr4g0011881 25.612 449 312 12 46 489 31 462 1.60e-35 139
Msa0506090 MtrunA17_Chr4g0046681 30.544 239 153 5 297 527 3 236 1.82e-35 132
Msa0506090 MtrunA17_Chr2g0280071 23.930 514 365 12 19 520 37 536 6.33e-33 133
Msa0506090 MtrunA17_Chr6g0451811 32.857 210 138 3 318 526 2 209 2.01e-32 123
Msa0506090 MtrunA17_Chr2g0280121 24.841 471 310 13 73 521 62 510 2.36e-32 130
Msa0506090 MtrunA17_Chr1g0160861 27.138 269 189 3 240 506 60 323 3.22e-32 126
Msa0506090 MtrunA17_Chr8g0390871 34.239 184 116 3 314 496 20 199 3.31e-32 123
Msa0506090 MtrunA17_Chr5g0409051 22.177 496 362 9 41 522 25 510 3.66e-32 129
Msa0506090 MtrunA17_Chr8g0364651 21.538 520 378 13 11 521 1 499 4.59e-32 129
Msa0506090 MtrunA17_Chr2g0280081 24.249 466 329 11 65 521 555 1005 5.62e-32 131
Msa0506090 MtrunA17_Chr2g0280081 25.647 425 298 9 73 489 58 472 1.05e-28 121
Msa0506090 MtrunA17_Chr1g0174431 33.654 208 129 4 321 521 1 206 6.25e-32 122
Msa0506090 MtrunA17_Chr5g0413911 24.217 479 316 14 42 491 39 499 3.27e-31 127
Msa0506090 MtrunA17_Chr4g0046661 31.628 215 144 3 314 527 18 230 6.49e-30 117
Msa0506090 MtrunA17_Chr2g0314781 34.463 177 102 2 337 513 1 163 7.44e-30 115
Msa0506090 MtrunA17_Chr6g0451681 31.557 244 153 6 290 526 245 481 1.04e-29 122
Msa0506090 MtrunA17_Chr6g0451681 25.561 223 151 4 20 234 42 257 6.08e-14 74.3
Msa0506090 MtrunA17_Chr8g0387101 24.307 469 314 12 73 521 60 507 1.63e-29 121
Msa0506090 MtrunA17_Chr6g0451771 32.692 208 135 3 321 526 22 226 1.68e-29 115
Msa0506090 MtrunA17_Chr5g0402981 34.184 196 125 4 333 526 4 197 3.50e-29 114
Msa0506090 MtrunA17_Chr4g0058211 27.982 218 153 2 303 519 1 215 8.81e-29 113
Msa0506090 MtrunA17_Chr5g0431591 28.352 261 168 5 238 489 34 284 1.22e-28 115
Msa0506090 MtrunA17_Chr4g0046701 36.686 169 98 4 363 527 1 164 2.38e-28 110
Msa0506090 MtrunA17_Chr2g0280011 29.384 211 135 4 320 521 7 212 1.68e-27 110
Msa0506090 MtrunA17_Chr5g0446101 30.078 256 166 5 247 500 46 290 1.58e-26 110
Msa0506090 MtrunA17_Chr2g0280061 30.516 213 130 6 320 521 7 212 6.21e-26 105
Msa0506090 MtrunA17_Chr2g0280041 22.926 458 333 11 73 521 90 536 2.55e-25 109
Msa0506090 MtrunA17_Chr6g0477081 29.596 223 144 3 209 431 32 241 9.78e-25 103
Msa0506090 MtrunA17_Chr3g0086681 33.333 174 110 4 358 527 4 175 2.56e-24 100
Msa0506090 MtrunA17_Chr5g0430151 32.667 150 97 2 352 500 6 152 7.46e-24 98.6
Msa0506090 MtrunA17_Chr1g0156061 23.427 461 283 11 46 504 56 448 1.53e-23 103
Msa0506090 MtrunA17_Chr8g0364631 23.705 502 332 14 45 525 32 503 1.92e-22 100
Msa0506090 MtrunA17_Chr5g0445761 32.222 180 119 1 321 500 1 177 2.08e-22 95.5
Msa0506090 MtrunA17_Chr3g0101591 29.213 178 121 2 331 506 49 223 4.34e-22 95.5
Msa0506090 MtrunA17_Chr5g0402971 26.071 280 183 7 34 300 27 295 8.58e-22 96.3
Msa0506090 MtrunA17_Chr5g0423621 33.987 153 96 2 337 489 1 148 1.50e-21 92.0
Msa0506090 MtrunA17_Chr6g0463621 28.962 183 127 3 321 502 1 181 1.83e-21 92.8
Msa0506090 MtrunA17_Chr5g0430041 32.895 152 94 3 352 500 6 152 4.39e-21 90.9
Msa0506090 MtrunA17_Chr4g0011851 28.261 184 127 2 308 489 1 181 7.43e-21 91.3
Msa0506090 MtrunA17_Chr5g0445751 26.791 321 191 13 18 319 10 305 1.22e-20 92.8
Msa0506090 MtrunA17_Chr4g0011941 28.994 169 117 1 321 489 1 166 3.42e-20 89.0
Msa0506090 MtrunA17_Chr5g0445351 33.099 142 92 1 349 490 52 190 3.43e-20 89.4
Msa0506090 MtrunA17_Chr4g0028321 35.294 136 82 3 395 530 31 160 8.02e-19 84.0
Msa0506090 MtrunA17_Chr4g0046691 26.592 267 163 7 46 302 40 283 5.23e-18 85.1
Msa0506090 MtrunA17_Chr1g0174421 23.602 322 225 9 9 324 13 319 2.12e-17 83.6
Msa0506090 MtrunA17_Chr5g0445371 27.094 203 110 5 290 489 29 196 2.47e-17 81.6
Msa0506090 MtrunA17_Chr8g0387001 22.646 446 297 15 48 466 29 453 4.82e-17 84.0
Msa0506090 MtrunA17_Chr5g0430171 27.500 240 147 7 19 251 10 229 8.04e-17 79.7
Msa0506090 MtrunA17_Chr0c19g0493771 24.818 274 188 6 226 489 353 618 1.31e-16 83.2
Msa0506090 MtrunA17_Chr5g0444981 31.902 163 107 2 327 489 17 175 1.86e-16 78.6
Msa0506090 MtrunA17_Chr5g0431631 31.469 143 97 1 14 156 19 160 2.66e-16 76.6
Msa0506090 MtrunA17_Chr8g0348751 23.543 446 298 16 48 466 29 458 2.70e-16 81.6
Msa0506090 MtrunA17_Chr3g0117301 32.203 118 77 1 372 489 1 115 3.69e-16 74.7
Msa0506090 MtrunA17_Chr6g0463611 26.946 167 120 2 17 181 20 186 5.68e-16 79.3
Msa0506090 MtrunA17_Chr3g0116731 31.579 114 71 1 372 485 1 107 6.10e-16 74.7
Msa0506090 MtrunA17_Chr3g0101541 34.454 119 75 1 371 489 3 118 1.65e-15 73.6
Msa0506090 MtrunA17_Chr6g0451801 22.848 302 198 9 20 302 19 304 1.69e-15 77.8
Msa0506090 MtrunA17_Chr5g0445411 27.564 156 108 2 21 172 17 171 2.39e-15 74.3
Msa0506090 MtrunA17_Chr4g0038271 22.363 474 314 16 20 466 62 508 2.42e-15 79.0
Msa0506090 MtrunA17_Chr3g0104351 22.440 459 286 18 48 466 36 464 7.64e-15 77.0
Msa0506090 MtrunA17_Chr1g0204271 25.498 251 152 8 249 473 232 473 2.62e-14 75.5
Msa0506090 MtrunA17_Chr1g0164321 26.667 240 140 6 260 466 259 495 5.06e-14 74.7
Msa0506090 MtrunA17_Chr7g0255131 21.382 463 331 15 19 466 11 455 7.88e-14 73.9
Msa0506090 MtrunA17_Chr5g0445361 34.000 100 63 1 390 489 7 103 1.32e-13 68.2
Msa0506090 MtrunA17_Chr2g0310371 34.328 134 85 2 20 153 3 133 1.59e-13 68.2
Msa0506090 MtrunA17_Chr4g0046671 26.937 271 168 11 46 302 45 299 3.69e-13 70.5
Msa0506090 MtrunA17_Chr4g0056981 48.529 68 35 0 349 416 3 70 3.87e-13 64.7
Msa0506090 MtrunA17_Chr8g0351311 23.482 247 170 5 255 489 243 482 4.48e-13 71.6
Msa0506090 MtrunA17_Chr4g0030741 25.223 337 218 12 18 344 37 349 4.74e-13 70.5
Msa0506090 MtrunA17_Chr4g0011931 22.069 290 204 8 18 301 3 276 5.49e-13 69.7
Msa0506090 MtrunA17_Chr4g0011861 22.662 278 194 7 46 316 30 293 6.26e-13 69.7
Msa0506090 MtrunA17_Chr7g0225531 27.841 176 124 3 314 487 306 480 6.73e-13 70.9
Msa0506090 MtrunA17_Chr8g0351391 22.383 277 186 6 234 489 213 481 9.86e-13 70.5
Msa0506090 MtrunA17_Chr8g0351401 26.953 256 155 10 233 466 212 457 1.67e-12 69.7
Msa0506090 MtrunA17_Chr1g0163421 23.715 253 176 7 264 501 276 526 2.09e-12 69.7
Msa0506090 MtrunA17_Chr1g0176851 24.066 241 175 2 135 375 2 234 2.31e-12 67.0
Msa0506090 MtrunA17_Chr1g0179811 23.759 282 193 7 226 494 243 515 2.63e-12 69.3
Msa0506090 MtrunA17_Chr5g0408181 21.589 491 308 17 20 492 7 438 3.91e-12 68.6
Msa0506090 MtrunA17_Chr1g0207851 24.747 198 139 3 82 278 72 260 4.17e-12 67.8
Msa0506090 MtrunA17_Chr1g0163451 23.810 252 175 7 264 500 260 509 5.72e-12 68.2
Msa0506090 MtrunA17_Chr3g0119681 22.056 467 316 18 49 487 40 486 6.33e-12 68.2
Msa0506090 MtrunA17_Chr8g0351441 23.320 253 164 8 238 466 210 456 6.44e-12 67.8
Msa0506090 MtrunA17_Chr3g0135841 27.551 196 136 6 272 466 292 482 6.82e-12 67.8
Msa0506090 MtrunA17_Chr1g0151221 26.531 196 138 6 272 466 284 474 7.61e-12 67.8
Msa0506090 MtrunA17_Chr2g0313771 22.434 419 282 18 89 494 111 499 9.37e-12 67.4
Msa0506090 MtrunA17_Chr1g0183611 26.415 212 144 6 284 487 187 394 9.62e-12 67.0
Msa0506090 MtrunA17_Chr4g0004481 21.457 508 315 21 21 495 9 465 1.22e-11 67.0
Msa0506090 MtrunA17_Chr1g0163351 22.388 268 184 8 247 500 233 490 1.24e-11 67.0
Msa0506090 MtrunA17_Chr1g0193811 22.924 301 215 10 224 515 226 518 1.89e-11 66.6
Msa0506090 MtrunA17_Chr6g0449331 23.228 254 173 7 247 484 234 481 2.41e-11 66.2
Msa0506090 MtrunA17_Chr6g0449351 23.629 237 170 5 235 466 181 411 3.49e-11 65.5
Msa0506090 MtrunA17_Chr1g0163281 26.339 224 155 6 272 487 267 488 4.68e-11 65.1
Msa0506090 MtrunA17_Chr7g0227291 20.645 465 319 17 21 466 9 442 4.83e-11 65.1
Msa0506090 MtrunA17_Chr8g0351461 20.841 547 368 19 1 520 1 509 6.92e-11 64.7
Msa0506090 MtrunA17_Chr6g0449341 23.643 258 175 7 247 488 282 533 7.36e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506090 AT4G39950.1 51.521 526 246 3 2 526 20 537 0.0 565
Msa0506090 AT4G39950.2 51.908 524 247 3 4 526 58 577 0.0 565
Msa0506090 AT5G05260.2 53.783 489 218 5 45 526 40 527 0.0 562
Msa0506090 AT2G22330.2 50.951 526 250 4 2 526 44 562 0.0 558
Msa0506090 AT2G22330.1 50.951 526 250 4 2 526 21 539 0.0 558
Msa0506090 AT5G05260.1 51.738 489 196 7 45 526 40 495 0.0 518
Msa0506090 AT5G35917.1 47.454 491 205 6 45 526 42 488 1.87e-163 473
Msa0506090 AT1G58260.1 45.720 514 272 3 20 526 12 525 3.90e-159 464
Msa0506090 AT1G79370.1 43.366 505 265 4 41 526 36 538 4.29e-150 441
Msa0506090 AT1G16410.1 40.713 533 302 6 8 526 1 533 1.15e-143 424
Msa0506090 AT1G16400.1 40.038 532 305 6 9 526 1 532 1.10e-140 417
Msa0506090 AT1G16410.2 38.889 414 241 5 8 409 1 414 2.46e-97 301
Msa0506090 AT1G01280.1 35.165 455 286 6 77 527 61 510 1.65e-87 279
Msa0506090 AT5G07990.1 31.879 527 322 14 19 530 8 512 1.34e-79 258
Msa0506090 AT4G12320.1 28.487 509 347 9 18 522 17 512 2.04e-67 226
Msa0506090 AT4G12300.1 28.180 511 344 11 18 522 17 510 8.66e-66 222
Msa0506090 AT2G40890.1 27.344 512 338 11 25 527 16 502 5.82e-60 206
Msa0506090 AT4G37430.1 27.184 515 329 15 19 520 11 492 3.61e-58 201
Msa0506090 AT4G22690.1 26.964 471 329 7 54 522 93 550 2.80e-57 200
Msa0506090 AT4G22710.1 26.964 471 329 7 54 522 62 519 3.81e-57 199
Msa0506090 AT5G04330.1 29.075 454 298 11 46 490 33 471 3.14e-56 196
Msa0506090 AT4G31940.1 27.236 492 345 8 47 526 33 523 4.52e-56 196
Msa0506090 AT4G12310.1 26.789 489 323 11 54 528 53 520 1.11e-55 195
Msa0506090 AT4G36220.1 27.708 480 305 12 52 512 47 503 1.52e-55 195
Msa0506090 AT4G31970.1 26.769 523 366 8 14 526 7 522 2.81e-54 191
Msa0506090 AT2G23190.1 27.044 477 320 12 19 490 49 502 1.35e-53 190
Msa0506090 AT5G44620.1 27.331 472 327 7 54 522 55 513 2.40e-53 189
Msa0506090 AT2G25160.1 28.409 528 341 13 19 526 8 518 3.84e-53 188
Msa0506090 AT5G25120.1 24.950 501 346 12 14 507 2 479 6.29e-53 187
Msa0506090 AT3G26300.1 26.261 476 328 9 19 489 6 463 6.35e-52 184
Msa0506090 AT3G48280.1 27.767 515 331 14 19 522 6 490 6.74e-52 184
Msa0506090 AT5G57220.1 28.571 448 292 12 45 489 30 452 7.46e-52 184
Msa0506090 AT4G37320.1 26.987 478 316 12 19 489 6 457 7.83e-52 184
Msa0506090 AT3G26320.1 26.752 471 300 11 35 489 22 463 1.16e-51 184
Msa0506090 AT5G67310.1 26.216 473 316 10 41 506 38 484 1.98e-51 183
Msa0506090 AT4G37340.1 27.061 473 321 11 21 489 5 457 2.21e-51 183
Msa0506090 AT3G28740.1 28.728 456 295 14 40 489 34 465 3.50e-51 183
Msa0506090 AT2G45550.1 25.794 504 341 12 13 510 7 483 4.02e-51 182
Msa0506090 AT4G15330.1 25.758 528 351 13 1 519 6 501 1.11e-50 181
Msa0506090 AT3G53300.1 27.368 475 289 14 40 490 23 465 1.39e-50 181
Msa0506090 AT4G37370.1 26.907 472 321 11 21 489 6 456 1.56e-50 181
Msa0506090 AT4G12330.1 27.673 477 318 11 54 522 55 512 2.59e-50 181
Msa0506090 AT1G13110.1 26.535 505 333 14 19 507 7 489 3.16e-50 180
Msa0506090 AT3G26330.1 26.316 456 310 9 41 489 27 463 3.31e-50 180
Msa0506090 AT5G35715.1 26.386 451 308 11 85 525 3 439 5.41e-50 178
Msa0506090 AT2G45560.1 25.732 478 331 11 19 489 13 473 5.62e-50 179
Msa0506090 AT2G23220.1 28.097 452 301 11 42 490 43 473 9.28e-50 179
Msa0506090 AT3G32047.1 26.852 432 292 7 85 510 80 493 1.01e-49 179
Msa0506090 AT2G14100.1 26.945 527 348 13 15 528 13 515 1.18e-49 179
Msa0506090 AT2G45570.1 27.845 413 283 6 82 489 72 474 1.18e-49 179
Msa0506090 AT1G74110.1 28.632 468 312 13 33 489 51 507 1.58e-49 179
Msa0506090 AT4G37410.1 26.378 508 337 15 19 520 13 489 1.60e-49 178
Msa0506090 AT3G10560.1 26.800 500 344 13 28 521 30 513 1.95e-49 178
Msa0506090 AT5G04630.1 27.203 522 342 16 19 521 7 509 2.12e-49 178
Msa0506090 AT5G10610.1 25.896 502 348 9 19 519 11 489 2.78e-49 177
Msa0506090 AT5G36220.1 26.844 488 310 12 19 495 18 469 3.04e-49 177
Msa0506090 AT4G13290.1 26.652 469 313 11 45 507 33 476 4.12e-49 177
Msa0506090 AT5G06900.1 27.557 479 321 12 13 487 5 461 6.44e-49 177
Msa0506090 AT4G13310.1 26.427 473 317 13 45 507 32 483 7.27e-49 176
Msa0506090 AT5G25180.1 24.187 492 342 11 23 507 12 479 8.74e-49 176
Msa0506090 AT3G48300.1 29.241 448 290 13 47 491 31 454 1.02e-48 176
Msa0506090 AT3G44250.1 28.163 490 316 14 40 518 23 487 1.03e-48 176
Msa0506090 AT3G48300.2 29.241 448 290 13 47 491 33 456 1.06e-48 176
Msa0506090 AT3G61880.1 27.586 493 334 14 33 520 55 529 1.63e-48 176
Msa0506090 AT3G48310.1 27.101 476 310 12 41 507 28 475 2.18e-48 175
Msa0506090 AT3G61880.2 27.975 479 323 13 47 520 68 529 3.77e-48 176
Msa0506090 AT4G15360.1 27.198 489 321 13 13 489 9 474 3.90e-48 175
Msa0506090 AT3G20140.1 27.292 480 314 16 45 513 42 497 4.01e-48 174
Msa0506090 AT5G06905.1 25.749 501 329 13 22 500 9 488 4.18e-48 175
Msa0506090 AT3G26310.1 25.361 485 320 10 19 489 6 462 9.24e-48 173
Msa0506090 AT4G31500.1 25.840 476 335 9 20 490 3 465 1.00e-47 173
Msa0506090 AT1G74550.1 26.062 518 337 13 21 526 3 486 1.11e-47 173
Msa0506090 AT3G48290.1 26.269 453 307 10 41 490 29 457 1.16e-47 173
Msa0506090 AT1G13090.2 26.652 469 305 9 37 490 20 464 1.19e-47 173
Msa0506090 AT5G25140.1 25.150 501 345 14 14 507 2 479 1.52e-47 172
Msa0506090 AT1G11610.2 25.709 494 341 14 41 528 29 502 1.70e-47 172
Msa0506090 AT1G11610.1 26.201 458 315 12 41 494 29 467 2.03e-47 172
Msa0506090 AT4G37330.1 27.579 475 312 15 21 489 6 454 4.04e-47 171
Msa0506090 AT1G74540.1 26.326 509 318 14 19 507 1 472 4.29e-47 171
Msa0506090 AT2G45580.1 27.361 413 285 7 82 489 72 474 7.35e-47 171
Msa0506090 AT2G27000.1 26.577 444 296 7 89 520 81 506 9.87e-47 171
Msa0506090 AT3G20950.1 25.239 523 343 15 22 520 14 512 1.17e-46 171
Msa0506090 AT4G37310.1 25.287 522 368 14 19 531 4 512 1.35e-46 171
Msa0506090 AT3G48270.1 26.539 471 317 11 41 506 27 473 2.27e-46 169
Msa0506090 AT5G57260.1 24.842 475 327 10 46 508 31 487 3.57e-46 169
Msa0506090 AT1G01190.2 28.310 491 302 18 15 489 48 504 3.63e-46 170
Msa0506090 AT1G01190.1 28.310 491 302 18 15 489 43 499 3.86e-46 169
Msa0506090 AT4G31950.1 26.641 518 353 11 22 526 8 511 3.95e-46 169
Msa0506090 AT3G25180.1 26.078 464 316 9 75 528 68 514 4.29e-46 169
Msa0506090 AT5G10600.1 26.087 483 325 11 13 489 19 475 6.59e-46 169
Msa0506090 AT2G46660.1 26.653 484 316 12 47 527 72 519 8.62e-46 168
Msa0506090 AT3G20940.1 23.554 484 350 8 43 520 40 509 8.86e-46 168
Msa0506090 AT5G35920.1 49.660 147 73 1 380 526 8 153 2.29e-45 157
Msa0506090 AT5G25130.1 24.390 492 346 10 20 507 10 479 3.44e-45 166
Msa0506090 AT3G61040.1 27.313 454 307 9 40 489 28 462 4.10e-45 166
Msa0506090 AT1G13080.1 26.722 479 326 13 19 490 8 468 6.25e-45 166
Msa0506090 AT3G20130.1 27.578 446 296 11 85 520 80 508 6.34e-45 166
Msa0506090 AT2G42250.1 25.673 483 325 11 24 491 18 481 7.04e-45 166
Msa0506090 AT4G13770.1 25.786 477 322 11 20 489 14 465 1.02e-44 165
Msa0506090 AT1G33720.1 25.217 460 307 11 44 489 37 473 1.53e-44 165
Msa0506090 AT4G15330.2 26.577 444 297 11 87 519 48 473 1.69e-44 164
Msa0506090 AT4G37360.1 25.732 478 323 10 19 489 5 457 2.19e-44 164
Msa0506090 AT3G53280.1 27.371 464 301 12 40 490 23 463 3.04e-44 164
Msa0506090 AT3G52970.2 28.059 474 304 17 42 490 33 494 3.40e-44 164
Msa0506090 AT3G26830.1 24.116 481 338 10 20 490 1 464 3.84e-44 163
Msa0506090 AT3G20080.2 27.143 490 321 15 45 520 42 509 4.69e-44 164
Msa0506090 AT3G20080.1 27.143 490 321 15 45 520 42 509 4.69e-44 164
Msa0506090 AT4G15350.1 24.550 444 313 6 85 520 73 502 9.33e-44 162
Msa0506090 AT3G52970.1 27.862 463 305 15 42 490 33 480 1.48e-43 162
Msa0506090 AT3G20090.2 25.951 447 302 10 85 520 81 509 1.52e-43 162
Msa0506090 AT1G50520.1 26.637 443 304 11 54 489 52 480 1.56e-43 162
Msa0506090 AT5G42590.1 26.483 472 318 13 25 489 13 462 2.05e-43 161
Msa0506090 AT2G24180.1 25.910 467 309 13 43 496 34 476 2.33e-43 161
Msa0506090 AT5G04660.1 26.608 451 304 11 82 521 78 512 2.34e-43 161
Msa0506090 AT3G20120.4 25.959 443 306 10 85 520 79 506 2.46e-43 161
Msa0506090 AT5G47990.1 26.949 449 294 13 85 520 80 507 5.01e-43 160
Msa0506090 AT3G26190.1 25.108 462 316 10 40 490 23 465 6.18e-43 160
Msa0506090 AT3G26180.1 25.546 458 314 12 42 489 27 467 7.38e-43 160
Msa0506090 AT3G26270.1 25.311 482 318 14 42 506 29 485 1.35e-42 159
Msa0506090 AT1G33730.1 28.613 346 226 7 151 489 6 337 1.52e-42 156
Msa0506090 AT1G33730.2 28.613 346 226 7 151 489 6 337 1.52e-42 156
Msa0506090 AT3G26170.1 25.410 488 328 14 14 489 4 467 1.78e-42 159
Msa0506090 AT3G20960.2 27.119 413 280 8 85 490 79 477 1.97e-42 159
Msa0506090 AT3G48290.2 24.843 479 307 11 41 490 29 483 2.51e-42 159
Msa0506090 AT3G26150.1 24.948 485 328 14 19 491 9 469 2.96e-42 158
Msa0506090 AT5G42580.1 24.818 411 278 8 85 489 77 462 2.99e-42 158
Msa0506090 AT1G28430.1 24.622 463 322 11 71 521 61 508 4.59e-42 158
Msa0506090 AT3G48320.1 26.758 512 326 15 6 507 3 475 8.41e-42 157
Msa0506090 AT4G37400.1 25.747 435 296 10 62 490 46 459 9.53e-42 157
Msa0506090 AT3G26210.1 24.641 418 285 9 85 490 68 467 1.22e-41 156
Msa0506090 AT3G20130.2 27.455 448 290 13 88 520 53 480 1.42e-41 156
Msa0506090 AT3G26280.1 23.663 486 324 13 22 490 15 470 1.52e-41 156
Msa0506090 AT3G26280.2 23.663 486 324 13 22 490 32 487 2.48e-41 156
Msa0506090 AT3G26290.1 26.180 466 304 10 38 489 24 463 2.51e-41 155
Msa0506090 AT3G26290.2 26.180 466 304 10 38 489 37 476 2.94e-41 155
Msa0506090 AT3G26160.1 24.835 455 315 11 45 489 30 467 3.46e-41 155
Msa0506090 AT4G15380.1 24.113 423 294 7 75 489 70 473 1.36e-40 154
Msa0506090 AT3G20100.1 24.658 438 296 10 85 509 79 495 1.62e-40 154
Msa0506090 AT2G30750.1 24.319 477 336 12 36 506 24 481 1.90e-40 153
Msa0506090 AT3G20110.1 24.366 513 349 16 19 520 13 497 4.42e-40 152
Msa0506090 AT1G11600.1 26.395 466 310 10 45 494 35 483 4.93e-40 152
Msa0506090 AT1G13100.1 23.932 468 315 12 55 506 38 480 8.24e-40 151
Msa0506090 AT1G50560.1 26.174 447 305 12 85 521 81 512 9.35e-40 151
Msa0506090 AT3G10570.1 25.383 457 315 10 75 521 73 513 1.24e-39 151
Msa0506090 AT3G26200.1 24.130 460 325 10 39 490 22 465 2.63e-39 150
Msa0506090 AT2G45580.2 32.143 252 161 6 243 489 74 320 2.86e-39 147
Msa0506090 AT5G09970.1 26.369 493 320 14 19 490 35 505 3.43e-39 150
Msa0506090 AT2G30770.1 23.779 471 334 11 42 506 30 481 5.07e-39 149
Msa0506090 AT1G33720.4 26.685 356 236 7 143 489 2 341 6.83e-39 146
Msa0506090 AT1G33720.3 26.685 356 236 7 143 489 2 341 6.83e-39 146
Msa0506090 AT1G33720.5 26.685 356 236 7 143 489 2 341 6.83e-39 146
Msa0506090 AT1G66540.1 27.019 359 241 8 134 489 4 344 8.95e-39 146
Msa0506090 AT3G20960.1 26.546 388 264 8 110 490 1 374 1.15e-37 144
Msa0506090 AT3G26230.1 22.934 484 336 12 19 489 6 465 2.82e-37 144
Msa0506090 AT3G26220.1 24.324 481 337 11 20 489 4 468 1.14e-36 142
Msa0506090 AT5G24950.1 22.013 477 346 11 37 506 24 481 1.14e-36 142
Msa0506090 AT1G66540.2 30.142 282 179 7 208 489 22 285 1.91e-36 138
Msa0506090 AT5G36220.2 29.043 303 188 6 197 495 44 323 4.59e-36 138
Msa0506090 AT3G20120.2 25.714 385 264 9 143 520 1 370 6.61e-36 138
Msa0506090 AT3G20120.3 25.714 385 264 9 143 520 1 370 6.61e-36 138
Msa0506090 AT3G20120.1 25.714 385 264 9 143 520 1 370 6.61e-36 138
Msa0506090 AT5G24960.1 25.155 485 338 12 42 519 30 496 7.06e-36 140
Msa0506090 AT1G13710.1 24.900 502 311 17 20 489 15 482 2.85e-35 139
Msa0506090 AT2G30490.1 23.874 444 311 10 77 509 63 490 4.20e-35 138
Msa0506090 AT1G64940.1 24.565 517 366 15 16 520 4 508 6.72e-35 137
Msa0506090 AT2G05180.1 26.683 416 251 9 66 460 60 442 1.92e-34 135
Msa0506090 AT1G33720.2 25.000 380 237 8 143 489 2 366 1.24e-33 132
Msa0506090 AT4G13310.2 25.995 377 254 10 45 414 32 390 2.66e-33 131
Msa0506090 AT2G02580.1 23.431 478 339 10 19 489 6 463 5.50e-33 132
Msa0506090 AT3G20090.1 25.707 389 260 10 143 520 1 371 7.78e-33 129
Msa0506090 AT4G20240.1 24.570 407 284 10 42 443 30 418 9.95e-33 130
Msa0506090 AT1G64930.1 24.409 508 321 17 45 520 32 508 5.89e-32 129
Msa0506090 AT3G20080.4 26.700 397 247 16 143 520 1 372 6.80e-31 124
Msa0506090 AT3G20080.5 26.700 397 247 16 143 520 1 372 6.80e-31 124
Msa0506090 AT3G20080.6 26.700 397 247 16 143 520 1 372 6.80e-31 124
Msa0506090 AT3G20080.3 26.700 397 247 16 143 520 1 372 6.80e-31 124
Msa0506090 AT2G45580.3 25.294 340 242 5 82 416 72 404 1.50e-30 123
Msa0506090 AT2G25160.2 28.042 378 256 8 19 387 8 378 2.82e-30 123
Msa0506090 AT2G27010.1 23.820 445 289 13 89 520 77 484 2.70e-29 121
Msa0506090 AT3G20935.1 29.268 205 138 4 320 520 133 334 3.12e-29 119
Msa0506090 AT1G64950.1 25.000 468 305 17 45 489 32 476 1.39e-28 119
Msa0506090 AT3G03470.1 24.421 475 307 13 44 491 30 479 2.14e-28 119
Msa0506090 AT2G12190.1 24.512 461 318 12 45 489 32 478 4.82e-28 117
Msa0506090 AT1G13080.2 25.141 354 238 11 149 490 12 350 1.14e-27 115
Msa0506090 AT3G61040.2 25.587 383 259 11 40 415 28 391 4.90e-27 113
Msa0506090 AT4G20240.2 24.138 377 264 9 42 414 30 388 1.60e-26 112
Msa0506090 AT5G25900.1 22.889 450 313 10 52 489 50 477 6.26e-26 111
Msa0506090 AT3G25180.2 25.155 322 219 6 75 387 68 376 1.49e-25 109
Msa0506090 AT1G58265.1 42.727 110 60 1 411 517 12 121 1.96e-24 100
Msa0506090 AT3G26180.2 27.600 250 170 6 248 489 87 333 3.17e-24 104
Msa0506090 AT1G64900.1 22.788 452 320 11 82 520 68 503 6.28e-24 105
Msa0506090 AT5G24960.2 24.668 377 266 8 42 415 30 391 1.53e-23 103
Msa0506090 AT5G61320.1 23.832 428 267 12 82 489 68 456 5.28e-23 102
Msa0506090 AT3G53290.1 24.760 416 272 12 101 510 11 391 2.42e-22 99.8
Msa0506090 AT3G56630.1 21.903 452 328 13 48 488 30 467 2.66e-20 94.4
Msa0506090 AT1G34540.1 21.414 481 347 14 21 487 3 466 1.45e-19 92.0
Msa0506090 AT1G13090.1 30.366 191 118 2 37 227 20 195 9.19e-19 87.4
Msa0506090 AT5G58860.1 23.568 454 283 15 48 466 32 456 3.17e-17 85.1
Msa0506090 AT1G19630.1 24.335 263 174 9 245 501 218 461 8.34e-17 83.6
Msa0506090 AT1G63710.1 23.967 484 296 18 43 483 24 478 8.86e-16 80.5
Msa0506090 AT4G39490.1 20.245 489 332 17 21 478 11 472 1.18e-15 80.1
Msa0506090 AT4G39500.2 25.620 242 169 4 255 487 246 485 4.71e-15 78.2
Msa0506090 AT4G39500.1 25.620 242 169 4 255 487 196 435 6.00e-15 77.8
Msa0506090 AT4G00360.1 22.177 496 331 19 48 507 29 505 4.94e-14 75.1
Msa0506090 AT3G53305.1 30.000 120 83 1 85 203 3 122 1.45e-13 72.4
Msa0506090 AT1G65340.1 21.166 463 299 19 49 478 30 459 3.18e-13 72.4
Msa0506090 AT1G31800.1 23.214 280 195 6 226 494 274 544 3.99e-13 72.4
Msa0506090 AT1G01600.1 21.903 452 301 18 48 466 29 461 1.96e-12 70.1
Msa0506090 AT4G32170.1 21.311 488 318 16 32 487 19 472 2.79e-12 69.7
Msa0506090 AT3G53130.1 22.113 407 291 12 88 485 117 506 2.98e-12 69.7
Msa0506090 AT2G45560.2 21.622 296 213 9 13 301 7 290 9.26e-12 66.6
Msa0506090 AT1G19630.2 25.381 197 133 7 245 438 218 403 2.34e-11 66.2
Msa0506090 AT5G52320.2 25.316 237 148 7 249 478 244 458 7.23e-11 65.1
Msa0506090 AT5G63450.1 29.282 181 117 5 314 487 295 471 7.68e-11 65.1
Msa0506090 AT5G63450.2 29.282 181 117 5 314 487 353 529 7.72e-11 65.1
Msa0506090 AT5G52320.1 25.316 237 148 7 249 478 244 458 7.90e-11 65.1

Find 139 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGATTGATTCTTGATATAT+TGG 0.187745 3_4:-52296984 None:intergenic
TAGGGTTCAGTCCAAACTTT+TGG 0.224115 3_4:-52296779 None:intergenic
GGCTCGTTTGCAAGCATTTC+AGG 0.226542 3_4:-52292951 None:intergenic
ATTTCCTTCATTGTCAATAA+TGG 0.233977 3_4:-52293695 None:intergenic
ATCCATTCAACTACATTTGA+TGG 0.262278 3_4:-52296491 None:intergenic
GTTTAGGAATATCTGATTCT+TGG 0.283032 3_4:-52296598 None:intergenic
CCAACTATAGGCCATGGTTT+TGG 0.288706 3_4:-52292921 None:intergenic
ATTATTGTGGTAATGTGTTT+AGG 0.290963 3_4:+52293354 Msa0506090:CDS
CACATAAAACATTATATTAT+CGG 0.294249 3_4:-52293279 None:intergenic
ATATCACTGGCCATGCTTAC+TGG 0.294253 3_4:-52293122 None:intergenic
CTCGTTTAAGTGGTATCTTA+TGG 0.313900 3_4:-52292868 None:intergenic
GGCCATCCCTAGGTTTATTA+AGG 0.328492 3_4:+52297140 Msa0506090:three_prime_UTR
TGTTACTCCGACAGTCCTTT+TGG 0.345519 3_4:+52292802 Msa0506090:CDS
AAAGGAATAATATGTTTAAC+TGG 0.348560 3_4:-52292710 None:intergenic
TTGGGAGAAACCCAAAAGTT+TGG 0.350192 3_4:+52296768 Msa0506090:CDS
TCAAATTCACTTCTGATTGA+AGG 0.357397 3_4:+52297339 Msa0506090:three_prime_UTR
GCAATTGTGGGACAAGTAAC+AGG 0.359372 3_4:-52293056 None:intergenic
AAGGATATGAACTTCAATTC+TGG 0.360150 3_4:-52296860 None:intergenic
AGATTGATTCTTGATATATT+GGG 0.365747 3_4:-52296983 None:intergenic
ATGGCGGCCTTGTGAATGTT+AGG 0.372901 3_4:+52293318 Msa0506090:CDS
TCCTAAACTCAACTTCTTGA+AGG 0.382284 3_4:+52296613 Msa0506090:CDS
TCGATCCATCATCCCATTGT+TGG 0.386687 3_4:-52293613 None:intergenic
GGTATGGAGGATGGAGGGCC+AGG 0.393083 3_4:+52293410 Msa0506090:CDS
ACAATATAGTTGGAAAAGAT+AGG 0.395527 3_4:+52296570 Msa0506090:CDS
GCCTTCAAGAAGTTGAGTTT+AGG 0.399976 3_4:-52296614 None:intergenic
TCATTATTAAGATGACGTTC+TGG 0.403962 3_4:-52296812 None:intergenic
GAACGTCATCTTAATAATGA+TGG 0.406535 3_4:+52296815 Msa0506090:CDS
ACGTTCTGGTTTGAATTTGT+AGG 0.416029 3_4:-52296798 None:intergenic
CTCTACGCAGGAATTGATAA+TGG 0.417843 3_4:+52296454 Msa0506090:intron
TTTCCGCCTTCATCCCATTA+CGG 0.419452 3_4:+52296652 Msa0506090:CDS
GAAGAATTAGACAATATAGT+TGG 0.422241 3_4:+52296560 Msa0506090:CDS
CGTTCTGGTTTGAATTTGTA+GGG 0.423343 3_4:-52296797 None:intergenic
TCAGGAAGATTGCCAACTAT+AGG 0.425435 3_4:-52292933 None:intergenic
CTGCTTGGAAGAAGTGGTCT+TGG 0.436119 3_4:+52296749 Msa0506090:CDS
AATACAAGGTACTTCGGAAA+AGG 0.444982 3_4:+52293389 Msa0506090:CDS
GGTTACTCCATGGCTTCACT+TGG 0.446859 3_4:+52296951 Msa0506090:CDS
AAATGTAGTTGAATGGATAT+TGG 0.449942 3_4:+52296496 Msa0506090:CDS
CAAGAATTCATGGGCAATTG+TGG 0.451132 3_4:-52293069 None:intergenic
ATCCATCAAATGTAGTTGAA+TGG 0.452518 3_4:+52296489 Msa0506090:CDS
AGCAGTACATGACTTCCCTT+TGG 0.452787 3_4:-52296731 None:intergenic
AATGAAGTCTTACAATAACT+TGG 0.458843 3_4:-52293724 None:intergenic
CCCCTTGTGTGGCCATCCCT+AGG 0.459450 3_4:+52297130 Msa0506090:three_prime_UTR
GGTTGTCCTGCTGTTATGCT+TGG 0.460769 3_4:+52296899 Msa0506090:CDS
ATCAGTGGCTTCAACACAAA+AGG 0.470001 3_4:+52293246 Msa0506090:CDS
GGAACATTGAAATCCGTAAT+GGG 0.476470 3_4:-52296665 None:intergenic
TAGGTGGATACACAAAATAA+TGG 0.478089 3_4:+52292980 Msa0506090:CDS
ATTGACAATGAAGGAAATCA+AGG 0.484244 3_4:+52293700 Msa0506090:CDS
AGAAATTACTTCATTCCAAA+GGG 0.486638 3_4:+52296716 Msa0506090:CDS
GGCTTTGCTGCCACCGTCAG+TGG 0.488213 3_4:-52297040 None:intergenic
ACCACGTTTCCCTGTACTAA+AGG 0.489469 3_4:-52296879 None:intergenic
TTGAGGCTACTTGACTTAGA+TGG 0.490459 3_4:+52293518 Msa0506090:CDS
GTGTATAACAAATGCAAAGA+TGG 0.491219 3_4:+52293299 Msa0506090:CDS
ACTAAGGCATTCGGTAAAAG+AGG 0.491654 3_4:+52297301 Msa0506090:three_prime_UTR
TGCTTGGAAGAAGTGGTCTT+GGG 0.494561 3_4:+52296750 Msa0506090:CDS
GGATGGAGGGCCAGGTCTTG+AGG 0.500026 3_4:+52293418 Msa0506090:CDS
AGAATCCAACAATGGGATGA+TGG 0.500981 3_4:+52293608 Msa0506090:CDS
TAATCCATTATTGACAATGA+AGG 0.501570 3_4:+52293691 Msa0506090:CDS
TAGAAATTACTTCATTCCAA+AGG 0.503061 3_4:+52296715 Msa0506090:CDS
AAGTTCATATCCTTTAGTAC+AGG 0.503203 3_4:+52296869 Msa0506090:CDS
TATGTTTAACTGGCTGAGCT+TGG 0.504772 3_4:-52292700 None:intergenic
AACAAGGAAAGGAGGCCAAA+AGG 0.505498 3_4:-52292817 None:intergenic
AACAATAAGCAAAGGCTCAA+AGG 0.507497 3_4:-52292728 None:intergenic
AAGGTACTTCGGAAAAGGTA+TGG 0.508812 3_4:+52293394 Msa0506090:CDS
TGAAGAGAGAATCCAACAAT+GGG 0.509956 3_4:+52293601 Msa0506090:CDS
TTCTGATTGAAGGATTTGCT+CGG 0.515571 3_4:+52297349 Msa0506090:three_prime_UTR
CCAAAACCATGGCCTATAGT+TGG 0.515967 3_4:+52292921 Msa0506090:CDS
AAGAATTCATGGGCAATTGT+GGG 0.516154 3_4:-52293068 None:intergenic
GGGAACATTGAAATCCGTAA+TGG 0.516584 3_4:-52296666 None:intergenic
AGGACTGTCGGAGTAACATA+AGG 0.517369 3_4:-52292797 None:intergenic
TTGGATTCTCTCTTCAATGA+GGG 0.526613 3_4:-52293594 None:intergenic
AAGGGAAGTCATGTACTGCT+TGG 0.530213 3_4:+52296734 Msa0506090:CDS
TACAATTCTGCTGCTAATCG+TGG 0.533354 3_4:-52297061 None:intergenic
AGCTGAGGTCAAGTATCCAC+TGG 0.536136 3_4:-52293150 None:intergenic
TCTCTCCACGCAGGCATCAG+TGG 0.538464 3_4:+52293231 Msa0506090:CDS
TGAAATCCGTAATGGGATGA+AGG 0.540525 3_4:-52296658 None:intergenic
GGATAACATGGACATTTCCT+AGG 0.543053 3_4:-52293034 None:intergenic
AACGTCATCTTAATAATGAT+GGG 0.545141 3_4:+52296816 Msa0506090:CDS
CTGATTATCTACCATGGTTG+AGG 0.545369 3_4:+52293501 Msa0506090:CDS
GTTGGATTCTCTCTTCAATG+AGG 0.548869 3_4:-52293595 None:intergenic
CATGTACTGCTTGGAAGAAG+TGG 0.549852 3_4:+52296743 Msa0506090:CDS
AGACAAAGGGTGCCGTACAT+AGG 0.550162 3_4:-52297221 None:intergenic
TGACTATAATGCTATTAGCT+AGG 0.558207 3_4:+52296930 Msa0506090:CDS
GACAAGTAACAGGGATAACA+TGG 0.559949 3_4:-52293046 None:intergenic
GTGCACTCCAAGTGAAGCCA+TGG 0.562249 3_4:-52296958 None:intergenic
TGTATCATTCGTAGAGACAT+GGG 0.564941 3_4:-52296687 None:intergenic
TTCGGAAAAGGTATGGAGGA+TGG 0.565742 3_4:+52293401 Msa0506090:CDS
AGTTCATATCCTTTAGTACA+GGG 0.571106 3_4:+52296870 Msa0506090:CDS
ATGAAGTCTTACAATAACTT+GGG 0.572780 3_4:-52293723 None:intergenic
TACAACACCTTAATAAACCT+AGG 0.573922 3_4:-52297147 None:intergenic
CTATTAGCTAGGTTACTCCA+TGG 0.577297 3_4:+52296941 Msa0506090:CDS
CTGCATCTGATTATCTACCA+TGG 0.578638 3_4:+52293495 Msa0506090:CDS
ACAACACCTTAATAAACCTA+GGG 0.579735 3_4:-52297146 None:intergenic
ATCTCTTGATGAGCCACTGA+CGG 0.581210 3_4:+52297027 Msa0506090:CDS
TTGTGTATCCACCTAGTCGT+AGG 0.582292 3_4:-52292972 None:intergenic
TTGAAGAGAGAATCCAACAA+TGG 0.582574 3_4:+52293600 Msa0506090:CDS
AGATTGCCAACTATAGGCCA+TGG 0.582595 3_4:-52292927 None:intergenic
GTTTGTTTCCGCTGCTTGTG+TGG 0.583043 3_4:+52297175 Msa0506090:three_prime_UTR
GAAATAGCATGTATCCGCCT+AGG 0.585840 3_4:+52293017 Msa0506090:CDS
AACCTAGGGATGGCCACACA+AGG 0.588988 3_4:-52297132 None:intergenic
TGCATCAAGACCAGTAAGCA+TGG 0.590760 3_4:+52293112 Msa0506090:CDS
TATGAACTTCAATTCTGGCT+CGG 0.592707 3_4:-52296855 None:intergenic
TTGTATCATTCGTAGAGACA+TGG 0.592919 3_4:-52296688 None:intergenic
ATTGCAACACAACATTATTG+TGG 0.594382 3_4:+52293341 Msa0506090:CDS
TCATCTTAATAATGATGGGT+CGG 0.598469 3_4:+52296820 Msa0506090:CDS
TGTTCAATTTCCTCAAGACC+TGG 0.600399 3_4:-52293428 None:intergenic
CTTAGATGGTCACAAGGGCA+AGG 0.601102 3_4:+52293532 Msa0506090:CDS
TCCACTGGAGATGATATCAC+TGG 0.605326 3_4:-52293135 None:intergenic
GCTATAAACCACACAAGCAG+CGG 0.606500 3_4:-52297183 None:intergenic
GAAAAGGTATGGAGGATGGA+GGG 0.606872 3_4:+52293405 Msa0506090:CDS
GCCAGTGATATCATCTCCAG+TGG 0.615219 3_4:+52293134 Msa0506090:CDS
GTGGAACCAAGCATAACAGC+AGG 0.618797 3_4:-52296905 None:intergenic
CACCTTAATAAACCTAGGGA+TGG 0.619844 3_4:-52297142 None:intergenic
CCTAGGGATGGCCACACAAG+GGG 0.622579 3_4:-52297130 None:intergenic
GCCAAAAGGTGCAAAAGCTG+AGG 0.625407 3_4:-52293165 None:intergenic
TTGCAAACGAGCCTACGACT+AGG 0.625940 3_4:+52292961 Msa0506090:CDS
AAGGAGGCCAAAAGGACTGT+CGG 0.626075 3_4:-52292809 None:intergenic
TAATAGCATTATAGTCATTG+TGG 0.627153 3_4:-52296924 None:intergenic
ACCTAGGGATGGCCACACAA+GGG 0.633829 3_4:-52297131 None:intergenic
CAATTGTGGGACAAGTAACA+GGG 0.638616 3_4:-52293055 None:intergenic
CCACGTATGTGCCCCTTGTG+TGG 0.640360 3_4:+52297119 Msa0506090:three_prime_UTR
CCACACAAGGGGCACATACG+TGG 0.641325 3_4:-52297119 None:intergenic
GCAGGAATTGATAATGGCAA+CGG 0.645864 3_4:+52296460 Msa0506090:intron
GGAAAAGGTATGGAGGATGG+AGG 0.648489 3_4:+52293404 Msa0506090:CDS
TCCTTTAGTACAGGGAAACG+TGG 0.649186 3_4:+52296878 Msa0506090:CDS
ATGCAGAGAAAGCATAAACA+TGG 0.651706 3_4:-52293478 None:intergenic
CAAACGAGCCTACGACTAGG+TGG 0.654257 3_4:+52292964 Msa0506090:CDS
ACTTGACTTAGATGGTCACA+AGG 0.669435 3_4:+52293526 Msa0506090:CDS
TATAACAAATGCAAAGATGG+CGG 0.671497 3_4:+52293302 Msa0506090:CDS
AAACTTTGCTCTCTCCACGC+AGG 0.673641 3_4:+52293222 Msa0506090:CDS
TTGCAATCCTAACATTCACA+AGG 0.678707 3_4:-52293325 None:intergenic
GCAAGGTAATAAGTGCAATG+AGG 0.680640 3_4:+52293549 Msa0506090:CDS
GTACTTCGGAAAAGGTATGG+AGG 0.686267 3_4:+52293397 Msa0506090:CDS
TGAAGCCACTGATGCCTGCG+TGG 0.698707 3_4:-52293236 None:intergenic
AATCCGTAATGGGATGAAGG+CGG 0.702285 3_4:-52296655 None:intergenic
AAGTCAAGTAGCCTCAACCA+TGG 0.704146 3_4:-52293512 None:intergenic
GTATCATTCGTAGAGACATG+GGG 0.704429 3_4:-52296686 None:intergenic
TCTTGATGAGCCACTGACGG+TGG 0.705829 3_4:+52297030 Msa0506090:CDS
TAACATGGACATTTCCTAGG+CGG 0.727704 3_4:-52293031 None:intergenic
CTTGACTTAGATGGTCACAA+GGG 0.738152 3_4:+52293527 Msa0506090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTGTTTTTTATAC+GGG + chr3_4:52294236-52294255 Msa0506090:intron 10.0%
!! AAAATAAGAAAATAAAAATC+AGG - chr3_4:52296248-52296267 None:intergenic 10.0%
!!! TTATTTTCTTATTTTTAATG+AGG + chr3_4:52296253-52296272 Msa0506090:intron 10.0%
!!! TATTTTCTTATTTTTAATGA+GGG + chr3_4:52296254-52296273 Msa0506090:intron 10.0%
!! CACATAAAACATTATATTAT+CGG - chr3_4:52293282-52293301 None:intergenic 15.0%
!!! AAAAAATCTATTTTGTTCAA+AGG - chr3_4:52295445-52295464 None:intergenic 15.0%
!!! TGTTATCTGAAATTTAATTA+TGG + chr3_4:52295676-52295695 Msa0506090:intron 15.0%
!!! GTTATCTGAAATTTAATTAT+GGG + chr3_4:52295677-52295696 Msa0506090:intron 15.0%
!! ATTAATTAGTGAATCAATAA+CGG - chr3_4:52295954-52295973 None:intergenic 15.0%
!! TACCTTCAAAAAATTTAAAA+GGG - chr3_4:52296003-52296022 None:intergenic 15.0%
!! ATACCTTCAAAAAATTTAAA+AGG - chr3_4:52296004-52296023 None:intergenic 15.0%
!!! ATTTTCTTATTTTTAATGAG+GGG + chr3_4:52296255-52296274 Msa0506090:intron 15.0%
!!! TTTAGCATTTTCATATTTTA+AGG + chr3_4:52296311-52296330 Msa0506090:intron 15.0%
!!! TTAGCATTTTCATATTTTAA+GGG + chr3_4:52296312-52296331 Msa0506090:intron 15.0%
!! AGATCTTATAACAAAAAAAA+AGG + chr3_4:52296387-52296406 Msa0506090:intron 15.0%
!! AAAGGAATAATATGTTTAAC+TGG - chr3_4:52292713-52292732 None:intergenic 20.0%
!!! TTTTTTAATACAAGGTACTT+CGG + chr3_4:52293383-52293402 Msa0506090:CDS 20.0%
!! CAATTATATTGTGTTTGTAA+TGG - chr3_4:52293773-52293792 None:intergenic 20.0%
!! GTAACATTTACAAAATTGTT+AGG + chr3_4:52293884-52293903 Msa0506090:intron 20.0%
!!! ACTGTGTTATTTTAATGTAT+AGG + chr3_4:52293972-52293991 Msa0506090:intron 20.0%
!!! ATTTTCATAGCTACATTTTA+GGG - chr3_4:52294190-52294209 None:intergenic 20.0%
!!! TATTTTCATAGCTACATTTT+AGG - chr3_4:52294191-52294210 None:intergenic 20.0%
!!! ATTTGTTGTTTATGTTTTGA+TGG - chr3_4:52294304-52294323 None:intergenic 20.0%
!!! GTTTGAAATAATAGATTTTC+TGG - chr3_4:52294626-52294645 None:intergenic 20.0%
!! TCTATTATTTCAAACTCATT+CGG + chr3_4:52294631-52294650 Msa0506090:intron 20.0%
!! TAAAAAAGCAAAAATTAGTG+AGG + chr3_4:52294746-52294765 Msa0506090:intron 20.0%
!! AAAAAAGCAAAAATTAGTGA+GGG + chr3_4:52294747-52294766 Msa0506090:intron 20.0%
!!! TTTTGGTTTTTGAATTTTAG+AGG - chr3_4:52295027-52295046 None:intergenic 20.0%
!! AGAAAAAGACATATAATGAA+TGG - chr3_4:52295309-52295328 None:intergenic 20.0%
!! TAACAAAAAAGTGAATTGAA+AGG + chr3_4:52295532-52295551 Msa0506090:intron 20.0%
!! AAAAAAAGGTTCTCATAAAA+AGG - chr3_4:52295715-52295734 None:intergenic 20.0%
!! CATTAGAAACAAAGAAAAAA+AGG - chr3_4:52295729-52295748 None:intergenic 20.0%
!!! ACTATTTTTTTAATTCCATG+TGG - chr3_4:52295794-52295813 None:intergenic 20.0%
!!! ATCAAACTCATGATTTTTTA+AGG - chr3_4:52295918-52295937 None:intergenic 20.0%
!! TTAATTAGTGAATCAATAAC+GGG - chr3_4:52295953-52295972 None:intergenic 20.0%
!! AAACATAATTGAATATACCA+TGG - chr3_4:52295978-52295997 None:intergenic 20.0%
!!! AATAGTTGGCAAATTTTAAT+TGG - chr3_4:52296168-52296187 None:intergenic 20.0%
!!! AGAATTTTTCAAGAAATAGT+TGG - chr3_4:52296182-52296201 None:intergenic 20.0%
!! TAAAAATCAGGTGAAAATAA+AGG - chr3_4:52296236-52296255 None:intergenic 20.0%
!! ATTGTAAAGGTAATATTCAA+AGG - chr3_4:52296354-52296373 None:intergenic 20.0%
!! CATAGAAATACATATTGTAA+AGG - chr3_4:52296367-52296386 None:intergenic 20.0%
!!! AGATTGATTCTTGATATATT+GGG - chr3_4:52296986-52297005 None:intergenic 20.0%
!!! AAGATTGATTCTTGATATAT+TGG - chr3_4:52296987-52297006 None:intergenic 20.0%
!! TAGAAAAATACAAAGACAAA+GGG - chr3_4:52297237-52297256 None:intergenic 20.0%
!! ATAGAAAAATACAAAGACAA+AGG - chr3_4:52297238-52297257 None:intergenic 20.0%
!!! TTGTCTTTGTATTTTTCTAT+TGG + chr3_4:52297238-52297257 Msa0506090:three_prime_UTR 20.0%
!! TTCTGAGTAAAAAAAAACTA+AGG + chr3_4:52297285-52297304 Msa0506090:three_prime_UTR 20.0%
!!! TAAAAAAAAACTAAGGCATT+CGG + chr3_4:52297292-52297311 Msa0506090:three_prime_UTR 20.0%
! CAAACAAAAACAATAAGCAA+AGG - chr3_4:52292739-52292758 None:intergenic 25.0%
! GTAAAAAACATAACAAGGAA+AGG - chr3_4:52292831-52292850 None:intergenic 25.0%
! TGAAGGTAAAAAACATAACA+AGG - chr3_4:52292836-52292855 None:intergenic 25.0%
!!! TGTTATGTTTTTTACCTTCA+TGG + chr3_4:52292836-52292855 Msa0506090:CDS 25.0%
!! AAGTTTTCTCAAGAATTCAT+GGG - chr3_4:52293081-52293100 None:intergenic 25.0%
!! ATTATTGTGGTAATGTGTTT+AGG + chr3_4:52293354-52293373 Msa0506090:CDS 25.0%
!!! GGAAACTGTTTTTTAATACA+AGG + chr3_4:52293375-52293394 Msa0506090:CDS 25.0%
! TAATCCATTATTGACAATGA+AGG + chr3_4:52293691-52293710 Msa0506090:CDS 25.0%
! ATTTCCTTCATTGTCAATAA+TGG - chr3_4:52293698-52293717 None:intergenic 25.0%
! ATGAAGTCTTACAATAACTT+GGG - chr3_4:52293726-52293745 None:intergenic 25.0%
! AATGAAGTCTTACAATAACT+TGG - chr3_4:52293727-52293746 None:intergenic 25.0%
! TATATTGTGTTTGTAATGGT+AGG - chr3_4:52293769-52293788 None:intergenic 25.0%
! TTAAAAAGCAATTGAAAGAG+TGG + chr3_4:52294083-52294102 Msa0506090:intron 25.0%
! GTGGAATGATATGTAAAAAT+AGG + chr3_4:52294102-52294121 Msa0506090:intron 25.0%
! AACATAAACAACAAATCGAA+TGG + chr3_4:52294308-52294327 Msa0506090:intron 25.0%
!! GAGATGTATGAAATTCTTTT+GGG - chr3_4:52294354-52294373 None:intergenic 25.0%
!! TGAGATGTATGAAATTCTTT+TGG - chr3_4:52294355-52294374 None:intergenic 25.0%
!!! TTAGTTTTGATTGATTTTGG+TGG - chr3_4:52294408-52294427 None:intergenic 25.0%
!!! AGATTTTCTGGTTTTTACTT+GGG - chr3_4:52294614-52294633 None:intergenic 25.0%
!!! TAGATTTTCTGGTTTTTACT+TGG - chr3_4:52294615-52294634 None:intergenic 25.0%
! AGAAAAAGCAAAATTAGAGA+GGG - chr3_4:52294859-52294878 None:intergenic 25.0%
! TAGAAAAAGCAAAATTAGAG+AGG - chr3_4:52294860-52294879 None:intergenic 25.0%
!! GTGTCTAATTGTAAGTTTTT+GGG - chr3_4:52294973-52294992 None:intergenic 25.0%
!! AGTGTCTAATTGTAAGTTTT+TGG - chr3_4:52294974-52294993 None:intergenic 25.0%
!!! GATTTTGGACTGTTTTTAAT+TGG - chr3_4:52295077-52295096 None:intergenic 25.0%
!!! TTGTTGTCAGTTTTATGTTA+AGG - chr3_4:52295363-52295382 None:intergenic 25.0%
! GAATGACCAACTTATTTATT+TGG + chr3_4:52295491-52295510 Msa0506090:intron 25.0%
! GTGAATCCAAATAAATAAGT+TGG - chr3_4:52295500-52295519 None:intergenic 25.0%
!!! GTTTTTTAATTTAGTCCACA+TGG + chr3_4:52295776-52295795 Msa0506090:intron 25.0%
! AAATAGTAGCCTGTTAAATA+TGG + chr3_4:52295807-52295826 Msa0506090:intron 25.0%
! TTAATACCACCATATTTAAC+AGG - chr3_4:52295819-52295838 None:intergenic 25.0%
! CATGAGTTTGATTCTTTAAA+TGG + chr3_4:52295926-52295945 Msa0506090:intron 25.0%
!!! CACCCTTTTAAATTTTTTGA+AGG + chr3_4:52295998-52296017 Msa0506090:intron 25.0%
! AAATGTAGTTGAATGGATAT+TGG + chr3_4:52296496-52296515 Msa0506090:CDS 25.0%
!!! CTTCAATTGCTTTTTCAAAA+AGG - chr3_4:52296544-52296563 None:intergenic 25.0%
! GAAGAATTAGACAATATAGT+TGG + chr3_4:52296560-52296579 Msa0506090:CDS 25.0%
! ACAATATAGTTGGAAAAGAT+AGG + chr3_4:52296570-52296589 Msa0506090:CDS 25.0%
! TAGAAATTACTTCATTCCAA+AGG + chr3_4:52296715-52296734 Msa0506090:CDS 25.0%
! AGAAATTACTTCATTCCAAA+GGG + chr3_4:52296716-52296735 Msa0506090:CDS 25.0%
! AACGTCATCTTAATAATGAT+GGG + chr3_4:52296816-52296835 Msa0506090:CDS 25.0%
! TAATAGCATTATAGTCATTG+TGG - chr3_4:52296927-52296946 None:intergenic 25.0%
AAAAACATAACAAGGAAAGG+AGG - chr3_4:52292828-52292847 None:intergenic 30.0%
!!! TATGGTTTTGATTACCATGA+AGG - chr3_4:52292853-52292872 None:intergenic 30.0%
TAGGTGGATACACAAAATAA+TGG + chr3_4:52292980-52292999 Msa0506090:CDS 30.0%
! CAAGTTTTCTCAAGAATTCA+TGG - chr3_4:52293082-52293101 None:intergenic 30.0%
GTGTATAACAAATGCAAAGA+TGG + chr3_4:52293299-52293318 Msa0506090:CDS 30.0%
TATAACAAATGCAAAGATGG+CGG + chr3_4:52293302-52293321 Msa0506090:CDS 30.0%
ATTGCAACACAACATTATTG+TGG + chr3_4:52293341-52293360 Msa0506090:CDS 30.0%
ATTGACAATGAAGGAAATCA+AGG + chr3_4:52293700-52293719 Msa0506090:CDS 30.0%
! TAGGAAATTTTGTTGAACGT+TGG + chr3_4:52294121-52294140 Msa0506090:intron 30.0%
!!! CGGTTAGTTTTGATTGATTT+TGG - chr3_4:52294411-52294430 None:intergenic 30.0%
! ATCATTTGCGATGTATTTTG+AGG - chr3_4:52294478-52294497 None:intergenic 30.0%
! AAAGGTGTGATGATGTTATA+GGG - chr3_4:52294576-52294595 None:intergenic 30.0%
! AAAAGGTGTGATGATGTTAT+AGG - chr3_4:52294577-52294596 None:intergenic 30.0%
TTTAGTGACGAAATTAGAGA+GGG - chr3_4:52294785-52294804 None:intergenic 30.0%
ATTTAGTGACGAAATTAGAG+AGG - chr3_4:52294786-52294805 None:intergenic 30.0%
AAAATCTCTCACAAATTCCT+TGG - chr3_4:52294816-52294835 None:intergenic 30.0%
!!! GTGCTTTAGTGATTTGTTTT+TGG - chr3_4:52294909-52294928 None:intergenic 30.0%
!!! GTAAGTTTTTGGGTTGATTA+TGG - chr3_4:52294963-52294982 None:intergenic 30.0%
!!! ATCGATTTTGTTTTGAGATC+GGG - chr3_4:52295001-52295020 None:intergenic 30.0%
!!! GATCGATTTTGTTTTGAGAT+CGG - chr3_4:52295002-52295021 None:intergenic 30.0%
GATCTCAAAACAAAATCGAT+CGG + chr3_4:52295001-52295020 Msa0506090:intron 30.0%
TATGCTACGTGTTTATGTTA+GGG - chr3_4:52295179-52295198 None:intergenic 30.0%
TTATGCTACGTGTTTATGTT+AGG - chr3_4:52295180-52295199 None:intergenic 30.0%
! AGGGACTATTGTTGTTAATT+TGG - chr3_4:52295231-52295250 None:intergenic 30.0%
! CTTTTCACTTTCACAAAGTA+TGG + chr3_4:52295257-52295276 Msa0506090:intron 30.0%
! GTTTTATGTTAAGGAGTTGT+GGG - chr3_4:52295354-52295373 None:intergenic 30.0%
!! AGTTTTATGTTAAGGAGTTG+TGG - chr3_4:52295355-52295374 None:intergenic 30.0%
! AAGTTGGTCATTCTAATAGT+GGG - chr3_4:52295484-52295503 None:intergenic 30.0%
!! TAAGTTGGTCATTCTAATAG+TGG - chr3_4:52295485-52295504 None:intergenic 30.0%
! TCAATATCGTATCCTTTTCA+CGG - chr3_4:52295606-52295625 None:intergenic 30.0%
TGATTCACTAATTAATGCCA+TGG + chr3_4:52295958-52295977 Msa0506090:intron 30.0%
ATCCATCAAATGTAGTTGAA+TGG + chr3_4:52296489-52296508 Msa0506090:CDS 30.0%
ATCCATTCAACTACATTTGA+TGG - chr3_4:52296494-52296513 None:intergenic 30.0%
!!! ATTGCTTTTTCAAAAAGGTC+TGG - chr3_4:52296539-52296558 None:intergenic 30.0%
GTTTAGGAATATCTGATTCT+TGG - chr3_4:52296601-52296620 None:intergenic 30.0%
TCATTATTAAGATGACGTTC+TGG - chr3_4:52296815-52296834 None:intergenic 30.0%
GAACGTCATCTTAATAATGA+TGG + chr3_4:52296815-52296834 Msa0506090:CDS 30.0%
!! TCATCTTAATAATGATGGGT+CGG + chr3_4:52296820-52296839 Msa0506090:CDS 30.0%
AAGGATATGAACTTCAATTC+TGG - chr3_4:52296863-52296882 None:intergenic 30.0%
AAGTTCATATCCTTTAGTAC+AGG + chr3_4:52296869-52296888 Msa0506090:CDS 30.0%
AGTTCATATCCTTTAGTACA+GGG + chr3_4:52296870-52296889 Msa0506090:CDS 30.0%
TGACTATAATGCTATTAGCT+AGG + chr3_4:52296930-52296949 Msa0506090:CDS 30.0%
!! ATCAATCTTTTCGATTCGAA+TGG + chr3_4:52296998-52297017 Msa0506090:CDS 30.0%
ACAACACCTTAATAAACCTA+GGG - chr3_4:52297149-52297168 None:intergenic 30.0%
TACAACACCTTAATAAACCT+AGG - chr3_4:52297150-52297169 None:intergenic 30.0%
!!! TTTTTTGTTTCGCCTATGTA+CGG + chr3_4:52297209-52297228 Msa0506090:three_prime_UTR 30.0%
TCAAATTCACTTCTGATTGA+AGG + chr3_4:52297339-52297358 Msa0506090:three_prime_UTR 30.0%
AACAATAAGCAAAGGCTCAA+AGG - chr3_4:52292731-52292750 None:intergenic 35.0%
CTCGTTTAAGTGGTATCTTA+TGG - chr3_4:52292871-52292890 None:intergenic 35.0%
!!! TTTTAGGGTTCTCGTTTAAG+TGG - chr3_4:52292881-52292900 None:intergenic 35.0%
!!! GGGGAAGTTTACGTTTTTTA+GGG - chr3_4:52292896-52292915 None:intergenic 35.0%
AAGAATTCATGGGCAATTGT+GGG - chr3_4:52293071-52293090 None:intergenic 35.0%
! TTTTTCCATTGTTCGCCAAA+AGG - chr3_4:52293182-52293201 None:intergenic 35.0%
TTGCAATCCTAACATTCACA+AGG - chr3_4:52293328-52293347 None:intergenic 35.0%
! AATACAAGGTACTTCGGAAA+AGG + chr3_4:52293389-52293408 Msa0506090:CDS 35.0%
! ATGCAGAGAAAGCATAAACA+TGG - chr3_4:52293481-52293500 None:intergenic 35.0%
TTGGATTCTCTCTTCAATGA+GGG - chr3_4:52293597-52293616 None:intergenic 35.0%
TTGAAGAGAGAATCCAACAA+TGG + chr3_4:52293600-52293619 Msa0506090:CDS 35.0%
TGAAGAGAGAATCCAACAAT+GGG + chr3_4:52293601-52293620 Msa0506090:CDS 35.0%
TGGATCGAAAAATGTTGAAG+AGG + chr3_4:52293628-52293647 Msa0506090:CDS 35.0%
TACTATCTAATCTCTGCTTC+TGG - chr3_4:52294031-52294050 None:intergenic 35.0%
!! CGAATGGTGTTGTATATAGT+TGG + chr3_4:52294324-52294343 Msa0506090:intron 35.0%
AGCTTATATTGTGGTTGTAG+CGG - chr3_4:52294431-52294450 None:intergenic 35.0%
! AAGGTGTGATGATGTTATAG+GGG - chr3_4:52294575-52294594 None:intergenic 35.0%
TGTTATGATGTCTTATCCAG+CGG - chr3_4:52294682-52294701 None:intergenic 35.0%
! GCTTCTAGACTCAAGTTTTT+GGG - chr3_4:52294707-52294726 None:intergenic 35.0%
! AGCTTCTAGACTCAAGTTTT+TGG - chr3_4:52294708-52294727 None:intergenic 35.0%
!!! GATTTGTTTTTGGAGTCTTG+TGG - chr3_4:52294899-52294918 None:intergenic 35.0%
CGATAGGCTGATAGTTTAAT+GGG - chr3_4:52294931-52294950 None:intergenic 35.0%
CCATTAAACTATCAGCCTAT+CGG + chr3_4:52294929-52294948 Msa0506090:intron 35.0%
!! GATTTTGGGTGGTTTGATTT+TGG - chr3_4:52295044-52295063 None:intergenic 35.0%
!!! TTGGCTTGTGGTTTGATTTT+GGG - chr3_4:52295058-52295077 None:intergenic 35.0%
!!! ATTGGCTTGTGGTTTGATTT+TGG - chr3_4:52295059-52295078 None:intergenic 35.0%
!!! GACTGTTTTTAATTGGCTTG+TGG - chr3_4:52295070-52295089 None:intergenic 35.0%
! CTCATGGTGACCTTTAATTT+GGG - chr3_4:52295128-52295147 None:intergenic 35.0%
ACTCATGGTGACCTTTAATT+TGG - chr3_4:52295129-52295148 None:intergenic 35.0%
TTTCTTCTGATGTCTACTCA+TGG - chr3_4:52295144-52295163 None:intergenic 35.0%
ATGCTACGTGTTTATGTTAG+GGG - chr3_4:52295178-52295197 None:intergenic 35.0%
TGAAAGTGAAAAGAGTGAGA+GGG - chr3_4:52295250-52295269 None:intergenic 35.0%
!! GTGTTTTGGATCTTGAGTAA+GGG - chr3_4:52295403-52295422 None:intergenic 35.0%
!! TGTGTTTTGGATCTTGAGTA+AGG - chr3_4:52295404-52295423 None:intergenic 35.0%
! AATATCGTATCCTTTTCACG+GGG - chr3_4:52295604-52295623 None:intergenic 35.0%
! CAATATCGTATCCTTTTCAC+GGG - chr3_4:52295605-52295624 None:intergenic 35.0%
TAGTAGCCTGTTAAATATGG+TGG + chr3_4:52295810-52295829 Msa0506090:intron 35.0%
TCCTAAACTCAACTTCTTGA+AGG + chr3_4:52296613-52296632 Msa0506090:CDS 35.0%
GGAACATTGAAATCCGTAAT+GGG - chr3_4:52296668-52296687 None:intergenic 35.0%
TGTATCATTCGTAGAGACAT+GGG - chr3_4:52296690-52296709 None:intergenic 35.0%
TTGTATCATTCGTAGAGACA+TGG - chr3_4:52296691-52296710 None:intergenic 35.0%
!! CGTTCTGGTTTGAATTTGTA+GGG - chr3_4:52296800-52296819 None:intergenic 35.0%
!! ACGTTCTGGTTTGAATTTGT+AGG - chr3_4:52296801-52296820 None:intergenic 35.0%
! TATGAACTTCAATTCTGGCT+CGG - chr3_4:52296858-52296877 None:intergenic 35.0%
! TTCTGATTGAAGGATTTGCT+CGG + chr3_4:52297349-52297368 Msa0506090:three_prime_UTR 35.0%
TATGTTTAACTGGCTGAGCT+TGG - chr3_4:52292703-52292722 None:intergenic 40.0%
!!! GGGGGAAGTTTACGTTTTTT+AGG - chr3_4:52292897-52292916 None:intergenic 40.0%
AAAAAACGTAAACTTCCCCC+AGG + chr3_4:52292897-52292916 Msa0506090:CDS 40.0%
TCAGGAAGATTGCCAACTAT+AGG - chr3_4:52292936-52292955 None:intergenic 40.0%
TAACATGGACATTTCCTAGG+CGG - chr3_4:52293034-52293053 None:intergenic 40.0%
GGATAACATGGACATTTCCT+AGG - chr3_4:52293037-52293056 None:intergenic 40.0%
GACAAGTAACAGGGATAACA+TGG - chr3_4:52293049-52293068 None:intergenic 40.0%
CAATTGTGGGACAAGTAACA+GGG - chr3_4:52293058-52293077 None:intergenic 40.0%
CAAGAATTCATGGGCAATTG+TGG - chr3_4:52293072-52293091 None:intergenic 40.0%
ATCAGTGGCTTCAACACAAA+AGG + chr3_4:52293246-52293265 Msa0506090:CDS 40.0%
! AAGGTACTTCGGAAAAGGTA+TGG + chr3_4:52293394-52293413 Msa0506090:CDS 40.0%
TGTTCAATTTCCTCAAGACC+TGG - chr3_4:52293431-52293450 None:intergenic 40.0%
CTGCATCTGATTATCTACCA+TGG + chr3_4:52293495-52293514 Msa0506090:CDS 40.0%
CTGATTATCTACCATGGTTG+AGG + chr3_4:52293501-52293520 Msa0506090:CDS 40.0%
TTGAGGCTACTTGACTTAGA+TGG + chr3_4:52293518-52293537 Msa0506090:CDS 40.0%
ACTTGACTTAGATGGTCACA+AGG + chr3_4:52293526-52293545 Msa0506090:CDS 40.0%
CTTGACTTAGATGGTCACAA+GGG + chr3_4:52293527-52293546 Msa0506090:CDS 40.0%
GCAAGGTAATAAGTGCAATG+AGG + chr3_4:52293549-52293568 Msa0506090:CDS 40.0%
GTTGGATTCTCTCTTCAATG+AGG - chr3_4:52293598-52293617 None:intergenic 40.0%
AGAATCCAACAATGGGATGA+TGG + chr3_4:52293608-52293627 Msa0506090:CDS 40.0%
! TCTAATCTCTGCTTCTGGTT+AGG - chr3_4:52294026-52294045 None:intergenic 40.0%
AGGATATGCCTCAATATGTG+GGG - chr3_4:52294458-52294477 None:intergenic 40.0%
GAGGATATGCCTCAATATGT+GGG - chr3_4:52294459-52294478 None:intergenic 40.0%
TGAGGATATGCCTCAATATG+TGG - chr3_4:52294460-52294479 None:intergenic 40.0%
! AGGTGTGATGATGTTATAGG+GGG - chr3_4:52294574-52294593 None:intergenic 40.0%
! GGTTTTTACTTGGGCTCAAT+CGG - chr3_4:52294605-52294624 None:intergenic 40.0%
GCTGGATAAGACATCATAAC+AGG + chr3_4:52294681-52294700 Msa0506090:intron 40.0%
! GTCACTAAATTTTGCGACCA+AGG + chr3_4:52294796-52294815 Msa0506090:intron 40.0%
TTAGAGAGGGAAGTTAGTGA+CGG - chr3_4:52294846-52294865 None:intergenic 40.0%
CCGATAGGCTGATAGTTTAA+TGG - chr3_4:52294932-52294951 None:intergenic 40.0%
ATTATGGTGTCTTCTCCGAT+AGG - chr3_4:52294947-52294966 None:intergenic 40.0%
CCAAAATCAACAAGAGCTAG+CGG + chr3_4:52295089-52295108 Msa0506090:intron 40.0%
TAGAGGTGGACCCAAATTAA+AGG + chr3_4:52295115-52295134 Msa0506090:intron 40.0%
GTGAAAGTGAAAAGAGTGAG+AGG - chr3_4:52295251-52295270 None:intergenic 40.0%
TGTTCAAAGGTTGCAACGTT+GGG - chr3_4:52295432-52295451 None:intergenic 40.0%
TTGTTCAAAGGTTGCAACGT+TGG - chr3_4:52295433-52295452 None:intergenic 40.0%
ATTAGATGAACCCCGTGAAA+AGG + chr3_4:52295591-52295610 Msa0506090:intron 40.0%
ATAGAAGAGACCAACATGCA+TGG + chr3_4:52295864-52295883 Msa0506090:intron 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + chr3_4:52296129-52296148 Msa0506090:intron 40.0%
! CTTGTTATAAACCTCTACGC+AGG + chr3_4:52296442-52296461 Msa0506090:intron 40.0%
CATTATCAATTCCTGCGTAG+AGG - chr3_4:52296456-52296475 None:intergenic 40.0%
CTCTACGCAGGAATTGATAA+TGG + chr3_4:52296454-52296473 Msa0506090:intron 40.0%
!! GCAGGAATTGATAATGGCAA+CGG + chr3_4:52296460-52296479 Msa0506090:intron 40.0%
GCCTTCAAGAAGTTGAGTTT+AGG - chr3_4:52296617-52296636 None:intergenic 40.0%
! TGAAATCCGTAATGGGATGA+AGG - chr3_4:52296661-52296680 None:intergenic 40.0%
GGGAACATTGAAATCCGTAA+TGG - chr3_4:52296669-52296688 None:intergenic 40.0%
GTATCATTCGTAGAGACATG+GGG - chr3_4:52296689-52296708 None:intergenic 40.0%
TTGGGAGAAACCCAAAAGTT+TGG + chr3_4:52296768-52296787 Msa0506090:CDS 40.0%
! AGGGTTCAGTCCAAACTTTT+GGG - chr3_4:52296781-52296800 None:intergenic 40.0%
! TAGGGTTCAGTCCAAACTTT+TGG - chr3_4:52296782-52296801 None:intergenic 40.0%
CTATTAGCTAGGTTACTCCA+TGG + chr3_4:52296941-52296960 Msa0506090:CDS 40.0%
TACAATTCTGCTGCTAATCG+TGG - chr3_4:52297064-52297083 None:intergenic 40.0%
CACCTTAATAAACCTAGGGA+TGG - chr3_4:52297145-52297164 None:intergenic 40.0%
! ACTAAGGCATTCGGTAAAAG+AGG + chr3_4:52297301-52297320 Msa0506090:three_prime_UTR 40.0%
AGGACTGTCGGAGTAACATA+AGG - chr3_4:52292800-52292819 None:intergenic 45.0%
! TGTTACTCCGACAGTCCTTT+TGG + chr3_4:52292802-52292821 Msa0506090:CDS 45.0%
AACAAGGAAAGGAGGCCAAA+AGG - chr3_4:52292820-52292839 None:intergenic 45.0%
! CCAACTATAGGCCATGGTTT+TGG - chr3_4:52292924-52292943 None:intergenic 45.0%
CCAAAACCATGGCCTATAGT+TGG + chr3_4:52292921-52292940 Msa0506090:CDS 45.0%
AGATTGCCAACTATAGGCCA+TGG - chr3_4:52292930-52292949 None:intergenic 45.0%
TTGTGTATCCACCTAGTCGT+AGG - chr3_4:52292975-52292994 None:intergenic 45.0%
GAAATAGCATGTATCCGCCT+AGG + chr3_4:52293017-52293036 Msa0506090:CDS 45.0%
GCAATTGTGGGACAAGTAAC+AGG - chr3_4:52293059-52293078 None:intergenic 45.0%
TGCATCAAGACCAGTAAGCA+TGG + chr3_4:52293112-52293131 Msa0506090:CDS 45.0%
ATATCACTGGCCATGCTTAC+TGG - chr3_4:52293125-52293144 None:intergenic 45.0%
TCCACTGGAGATGATATCAC+TGG - chr3_4:52293138-52293157 None:intergenic 45.0%
! ACCTCAGCTTTTGCACCTTT+TGG + chr3_4:52293164-52293183 Msa0506090:CDS 45.0%
! TTGCACCTTTTGGCGAACAA+TGG + chr3_4:52293174-52293193 Msa0506090:CDS 45.0%
! GTACTTCGGAAAAGGTATGG+AGG + chr3_4:52293397-52293416 Msa0506090:CDS 45.0%
! TTCGGAAAAGGTATGGAGGA+TGG + chr3_4:52293401-52293420 Msa0506090:CDS 45.0%
! GAAAAGGTATGGAGGATGGA+GGG + chr3_4:52293405-52293424 Msa0506090:CDS 45.0%
AAGTCAAGTAGCCTCAACCA+TGG - chr3_4:52293515-52293534 None:intergenic 45.0%
TCGATCCATCATCCCATTGT+TGG - chr3_4:52293616-52293635 None:intergenic 45.0%
! TGGGGGTGTAGCTTATATTG+TGG - chr3_4:52294440-52294459 None:intergenic 45.0%
GGATATGCCTCAATATGTGG+GGG - chr3_4:52294457-52294476 None:intergenic 45.0%
! GTGATGATGTTATAGGGGGA+AGG - chr3_4:52294570-52294589 None:intergenic 45.0%
GACGTGAGTTAAATTGGTGG+TGG - chr3_4:52294660-52294679 None:intergenic 45.0%
!! GCTTGTGGTTTGATTTTGGG+TGG - chr3_4:52295055-52295074 None:intergenic 45.0%
!!! CCGCTAGCTCTTGTTGATTT+TGG - chr3_4:52295092-52295111 None:intergenic 45.0%
! ACGTTGGGGGTAATGTGTTT+TGG - chr3_4:52295417-52295436 None:intergenic 45.0%
TTCAAAGGTTGCAACGTTGG+GGG - chr3_4:52295430-52295449 None:intergenic 45.0%
GTTCAAAGGTTGCAACGTTG+GGG - chr3_4:52295431-52295450 None:intergenic 45.0%
! ACCAACATGCATGGTGTTGA+GGG + chr3_4:52295873-52295892 Msa0506090:intron 45.0%
GGCAAGTAGTGCATTGTGAT+TGG - chr3_4:52296095-52296114 None:intergenic 45.0%
GCACTACTTGCCACAATTCA+AGG + chr3_4:52296103-52296122 Msa0506090:intron 45.0%
CTACTTGCCACAATTCAAGG+AGG + chr3_4:52296106-52296125 Msa0506090:intron 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG + chr3_4:52296123-52296142 Msa0506090:intron 45.0%
TTTCCGCCTTCATCCCATTA+CGG + chr3_4:52296652-52296671 Msa0506090:CDS 45.0%
! AATCCGTAATGGGATGAAGG+CGG - chr3_4:52296658-52296677 None:intergenic 45.0%
AGCAGTACATGACTTCCCTT+TGG - chr3_4:52296734-52296753 None:intergenic 45.0%
AAGGGAAGTCATGTACTGCT+TGG + chr3_4:52296734-52296753 Msa0506090:CDS 45.0%
CATGTACTGCTTGGAAGAAG+TGG + chr3_4:52296743-52296762 Msa0506090:CDS 45.0%
TGCTTGGAAGAAGTGGTCTT+GGG + chr3_4:52296750-52296769 Msa0506090:CDS 45.0%
TCCTTTAGTACAGGGAAACG+TGG + chr3_4:52296878-52296897 Msa0506090:CDS 45.0%
ACCACGTTTCCCTGTACTAA+AGG - chr3_4:52296882-52296901 None:intergenic 45.0%
ATCTCTTGATGAGCCACTGA+CGG + chr3_4:52297027-52297046 Msa0506090:CDS 45.0%
GGCCATCCCTAGGTTTATTA+AGG + chr3_4:52297140-52297159 Msa0506090:three_prime_UTR 45.0%
GCTATAAACCACACAAGCAG+CGG - chr3_4:52297186-52297205 None:intergenic 45.0%
!!! TTTTTTTTTTGTTTTTTATA+CGG + chr3_4:52294235-52294254 Msa0506090:intron 5.0%
!! TTGAAAAAAAAAATTAAAAA+CGG + chr3_4:52295650-52295669 Msa0506090:intron 5.0%
AAGGAGGCCAAAAGGACTGT+CGG - chr3_4:52292812-52292831 None:intergenic 50.0%
!!! TAGGCCATGGTTTTGGACCT+GGG - chr3_4:52292917-52292936 None:intergenic 50.0%
!!! ATAGGCCATGGTTTTGGACC+TGG - chr3_4:52292918-52292937 None:intergenic 50.0%
GGCTCGTTTGCAAGCATTTC+AGG - chr3_4:52292954-52292973 None:intergenic 50.0%
TTGCAAACGAGCCTACGACT+AGG + chr3_4:52292961-52292980 Msa0506090:CDS 50.0%
GCCAGTGATATCATCTCCAG+TGG + chr3_4:52293134-52293153 Msa0506090:CDS 50.0%
AGCTGAGGTCAAGTATCCAC+TGG - chr3_4:52293153-52293172 None:intergenic 50.0%
! GCCAAAAGGTGCAAAAGCTG+AGG - chr3_4:52293168-52293187 None:intergenic 50.0%
AAACTTTGCTCTCTCCACGC+AGG + chr3_4:52293222-52293241 Msa0506090:CDS 50.0%
! ATGGCGGCCTTGTGAATGTT+AGG + chr3_4:52293318-52293337 Msa0506090:CDS 50.0%
! GGAAAAGGTATGGAGGATGG+AGG + chr3_4:52293404-52293423 Msa0506090:CDS 50.0%
CTTAGATGGTCACAAGGGCA+AGG + chr3_4:52293532-52293551 Msa0506090:CDS 50.0%
AGCTACACCCCCACATATTG+AGG + chr3_4:52294447-52294466 Msa0506090:intron 50.0%
TGTTGTGAGTAGCAGGCGAT+AGG - chr3_4:52294522-52294541 None:intergenic 50.0%
!!! GGGGTTTTGTTGTGAGTAGC+AGG - chr3_4:52294529-52294548 None:intergenic 50.0%
TGATGTTATAGGGGGAAGGC+CGG - chr3_4:52294566-52294585 None:intergenic 50.0%
GGGCTCAATCGGTGAAGAAA+AGG - chr3_4:52294594-52294613 None:intergenic 50.0%
GCGGACGTGAGTTAAATTGG+TGG - chr3_4:52294663-52294682 None:intergenic 50.0%
CCAGCGGACGTGAGTTAAAT+TGG - chr3_4:52294666-52294685 None:intergenic 50.0%
CCAATTTAACTCACGTCCGC+TGG + chr3_4:52294663-52294682 Msa0506090:intron 50.0%
ACAAGAGCTAGCGGCAATAG+AGG + chr3_4:52295098-52295117 Msa0506090:intron 50.0%
! GACCAACATGCATGGTGTTG+AGG + chr3_4:52295872-52295891 Msa0506090:intron 50.0%
TCCCTCAACACCATGCATGT+TGG - chr3_4:52295877-52295896 None:intergenic 50.0%
! ATGCATGGTGTTGAGGGAAG+CGG + chr3_4:52295879-52295898 Msa0506090:intron 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr3_4:52296111-52296130 Msa0506090:intron 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr3_4:52296116-52296135 None:intergenic 50.0%
CTGCTTGGAAGAAGTGGTCT+TGG + chr3_4:52296749-52296768 Msa0506090:CDS 50.0%
GGTTGTCCTGCTGTTATGCT+TGG + chr3_4:52296899-52296918 Msa0506090:CDS 50.0%
GTGGAACCAAGCATAACAGC+AGG - chr3_4:52296908-52296927 None:intergenic 50.0%
GGTTACTCCATGGCTTCACT+TGG + chr3_4:52296951-52296970 Msa0506090:CDS 50.0%
GTTTGTTTCCGCTGCTTGTG+TGG + chr3_4:52297175-52297194 Msa0506090:three_prime_UTR 50.0%
!! AGACAAAGGGTGCCGTACAT+AGG - chr3_4:52297224-52297243 None:intergenic 50.0%
TTCCCCCAGGTCCAAAACCA+TGG + chr3_4:52292910-52292929 Msa0506090:CDS 55.0%
!!! AGGCCATGGTTTTGGACCTG+GGG - chr3_4:52292916-52292935 None:intergenic 55.0%
CAAACGAGCCTACGACTAGG+TGG + chr3_4:52292964-52292983 Msa0506090:CDS 55.0%
ACCCCTCCCAACCATCAAAC+CGG + chr3_4:52294544-52294563 Msa0506090:intron 55.0%
!! GGAAGGCCGGTTTGATGGTT+GGG - chr3_4:52294553-52294572 None:intergenic 55.0%
AGAGCTAGCGGCAATAGAGG+TGG + chr3_4:52295101-52295120 Msa0506090:intron 55.0%
GTGCACTCCAAGTGAAGCCA+TGG - chr3_4:52296961-52296980 None:intergenic 55.0%
TCTTGATGAGCCACTGACGG+TGG + chr3_4:52297030-52297049 Msa0506090:CDS 55.0%
ACCTAGGGATGGCCACACAA+GGG - chr3_4:52297134-52297153 None:intergenic 55.0%
AACCTAGGGATGGCCACACA+AGG - chr3_4:52297135-52297154 None:intergenic 55.0%
!!! GGCCATGGTTTTGGACCTGG+GGG - chr3_4:52292915-52292934 None:intergenic 60.0%
TCTCTCCACGCAGGCATCAG+TGG + chr3_4:52293231-52293250 Msa0506090:CDS 60.0%
TGAAGCCACTGATGCCTGCG+TGG - chr3_4:52293239-52293258 None:intergenic 60.0%
!! GCCGGTTTGATGGTTGGGAG+GGG - chr3_4:52294548-52294567 None:intergenic 60.0%
!! GGCCGGTTTGATGGTTGGGA+GGG - chr3_4:52294549-52294568 None:intergenic 60.0%
!! AGGCCGGTTTGATGGTTGGG+AGG - chr3_4:52294550-52294569 None:intergenic 60.0%
!! GGGAAGGCCGGTTTGATGGT+TGG - chr3_4:52294554-52294573 None:intergenic 60.0%
!! TAGGGGGAAGGCCGGTTTGA+TGG - chr3_4:52294558-52294577 None:intergenic 60.0%
! CCACACAAGGGGCACATACG+TGG - chr3_4:52297122-52297141 None:intergenic 60.0%
CCACGTATGTGCCCCTTGTG+TGG + chr3_4:52297119-52297138 Msa0506090:three_prime_UTR 60.0%
CCTAGGGATGGCCACACAAG+GGG - chr3_4:52297133-52297152 None:intergenic 60.0%
GGTATGGAGGATGGAGGGCC+AGG + chr3_4:52293410-52293429 Msa0506090:CDS 65.0%
GGATGGAGGGCCAGGTCTTG+AGG + chr3_4:52293418-52293437 Msa0506090:CDS 65.0%
GGCTTTGCTGCCACCGTCAG+TGG - chr3_4:52297043-52297062 None:intergenic 65.0%
CCCCTTGTGTGGCCATCCCT+AGG + chr3_4:52297130-52297149 Msa0506090:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 52292698 52297402 52292698 ID=Msa0506090;Name=Msa0506090
chr3_4 mRNA 52292698 52297402 52292698 ID=Msa0506090-mRNA-1;Parent=Msa0506090;Name=Msa0506090-mRNA-1;_AED=0.07;_eAED=0.07;_QI=79|1|1|1|1|1|2|300|531
chr3_4 exon 52292698 52293733 52292698 ID=Msa0506090-mRNA-1:exon:11400;Parent=Msa0506090-mRNA-1
chr3_4 exon 52296464 52297402 52296464 ID=Msa0506090-mRNA-1:exon:11401;Parent=Msa0506090-mRNA-1
chr3_4 five_prime_UTR 52292698 52292776 52292698 ID=Msa0506090-mRNA-1:five_prime_utr;Parent=Msa0506090-mRNA-1
chr3_4 CDS 52292777 52293733 52292777 ID=Msa0506090-mRNA-1:cds;Parent=Msa0506090-mRNA-1
chr3_4 CDS 52296464 52297102 52296464 ID=Msa0506090-mRNA-1:cds;Parent=Msa0506090-mRNA-1
chr3_4 three_prime_UTR 52297103 52297402 52297103 ID=Msa0506090-mRNA-1:three_prime_utr;Parent=Msa0506090-mRNA-1
Gene Sequence

>Msa0506090

ATGAATTACACTCATAGTTTCCTTATGTTACTCCGACAGTCCTTTTGGCCTCCTTTCCTTGTTATGTTTTTTACCTTCATGGTAATCAAAACCATAAGATACCACTTAAACGAGAACCCTAAAAAACGTAAACTTCCCCCAGGTCCAAAACCATGGCCTATAGTTGGCAATCTTCCTGAAATGCTTGCAAACGAGCCTACGACTAGGTGGATACACAAAATAATGGAAGAAAAAAACACAGAAATAGCATGTATCCGCCTAGGAAATGTCCATGTTATCCCTGTTACTTGTCCCACAATTGCCCATGAATTCTTGAGAAAACTTGATGTTGATTTTGCATCAAGACCAGTAAGCATGGCCAGTGATATCATCTCCAGTGGATACTTGACCTCAGCTTTTGCACCTTTTGGCGAACAATGGAAAAAGATGAAGAAAATCATTACTAAAACTTTGCTCTCTCCACGCAGGCATCAGTGGCTTCAACACAAAAGGAACGAAGAAGCCGATAATATAATGTTTTATGTGTATAACAAATGCAAAGATGGCGGCCTTGTGAATGTTAGGATTGCAACACAACATTATTGTGGTAATGTGTTTAGGAAACTGTTTTTTAATACAAGGTACTTCGGAAAAGGTATGGAGGATGGAGGGCCAGGTCTTGAGGAAATTGAACATGTTGATGCTGTTTTCACATTGCTTAACCATGTTTATGCTTTCTCTGCATCTGATTATCTACCATGGTTGAGGCTACTTGACTTAGATGGTCACAAGGGCAAGGTAATAAGTGCAATGAGGATAATGAACAAGTATCATGATTCCCTCATTGAAGAGAGAATCCAACAATGGGATGATGGATCGAAAAATGTTGAAGAGGATTTGCTAGATGTTTTGATCTCGTTGAAAGATGTCAATAATAATCCATTATTGACAATGAAGGAAATCAAGGCCCAAGTTATTGAATTGATAATGGCAACGGTAGACAATCCATCAAATGTAGTTGAATGGATATTGGCTGAGATGTTAATTCAGCCAGACCTTTTTGAAAAAGCAATTGAAGAATTAGACAATATAGTTGGAAAAGATAGGCTTGTCCAAGAATCAGATATTCCTAAACTCAACTTCTTGAAGGCTTGTGCAAGAGAAGCTTTCCGCCTTCATCCCATTACGGATTTCAATGTTCCCCATGTCTCTACGAATGATACAATGATTAGAAATTACTTCATTCCAAAGGGAAGTCATGTACTGCTTGGAAGAAGTGGTCTTGGGAGAAACCCAAAAGTTTGGACTGAACCCTACAAATTCAAACCAGAACGTCATCTTAATAATGATGGGTCGGATATAGCGTTGACCGAGCCAGAATTGAAGTTCATATCCTTTAGTACAGGGAAACGTGGTTGTCCTGCTGTTATGCTTGGTTCCACAATGACTATAATGCTATTAGCTAGGTTACTCCATGGCTTCACTTGGAGTGCACATCCCAATATATCAAGAATCAATCTTTTCGATTCGAATGGTGTTATATCTCTTGATGAGCCACTGACGGTGGCAGCAAAGCCACGATTAGCAGCAGAATTGTACAACTTTTCATGTAAGTGA

Protein sequence

>Msa0506090

MNYTHSFLMLLRQSFWPPFLVMFFTFMVIKTIRYHLNENPKKRKLPPGPKPWPIVGNLPEMLANEPTTRWIHKIMEEKNTEIACIRLGNVHVIPVTCPTIAHEFLRKLDVDFASRPVSMASDIISSGYLTSAFAPFGEQWKKMKKIITKTLLSPRRHQWLQHKRNEEADNIMFYVYNKCKDGGLVNVRIATQHYCGNVFRKLFFNTRYFGKGMEDGGPGLEEIEHVDAVFTLLNHVYAFSASDYLPWLRLLDLDGHKGKVISAMRIMNKYHDSLIEERIQQWDDGSKNVEEDLLDVLISLKDVNNNPLLTMKEIKAQVIELIMATVDNPSNVVEWILAEMLIQPDLFEKAIEELDNIVGKDRLVQESDIPKLNFLKACAREAFRLHPITDFNVPHVSTNDTMIRNYFIPKGSHVLLGRSGLGRNPKVWTEPYKFKPERHLNNDGSDIALTEPELKFISFSTGKRGCPAVMLGSTMTIMLLARLLHGFTWSAHPNISRINLFDSNGVISLDEPLTVAAKPRLAAELYNFSCK*