Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425900 | ACY06328.1 | 99.726 | 365 | 1 | 0 | 1 | 365 | 1 | 365 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425900 | sp|P28002|COMT1_MEDSA | 99.452 | 365 | 2 | 0 | 1 | 365 | 1 | 365 | 0.0 | 754 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425900 | A0A396J046 | 98.630 | 365 | 5 | 0 | 1 | 365 | 55 | 419 | 0.0 | 755 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0168630 | Msa0425900 | 0.809942 | 1.474696e-50 | -8.615850e-47 |
| Msa0425900 | Msa0426120 | 0.972594 | 5.065961e-135 | -8.615850e-47 |
| Msa0425900 | Msa0472340 | 0.803086 | 4.122034e-49 | -8.615850e-47 |
| Msa0425900 | Msa0479410 | 0.919653 | 3.439924e-87 | -8.615850e-47 |
| Msa0425900 | Msa1133220 | 0.840078 | 1.079760e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425900 | MtrunA17_Chr3g0128011 | 98.630 | 365 | 5 | 0 | 1 | 365 | 55 | 419 | 0.0 | 755 |
| Msa0425900 | MtrunA17_Chr5g0448091 | 67.614 | 352 | 113 | 1 | 13 | 363 | 12 | 363 | 0.0 | 518 |
| Msa0425900 | MtrunA17_Chr7g0276411 | 55.966 | 352 | 153 | 1 | 14 | 363 | 11 | 362 | 2.48e-149 | 426 |
| Msa0425900 | MtrunA17_Chr8g0367441 | 53.315 | 362 | 167 | 1 | 4 | 363 | 16 | 377 | 1.70e-145 | 416 |
| Msa0425900 | MtrunA17_Chr8g0367491 | 54.203 | 345 | 156 | 1 | 21 | 363 | 32 | 376 | 4.95e-143 | 410 |
| Msa0425900 | MtrunA17_Chr8g0367451 | 52.486 | 362 | 170 | 1 | 4 | 363 | 15 | 376 | 9.45e-139 | 399 |
| Msa0425900 | MtrunA17_Chr7g0276401 | 52.586 | 348 | 164 | 1 | 16 | 363 | 29 | 375 | 1.71e-133 | 386 |
| Msa0425900 | MtrunA17_Chr8g0367501 | 50.847 | 354 | 170 | 2 | 14 | 363 | 12 | 365 | 3.23e-128 | 374 |
| Msa0425900 | MtrunA17_Chr8g0367381 | 51.360 | 331 | 140 | 2 | 4 | 332 | 16 | 327 | 9.66e-124 | 359 |
| Msa0425900 | MtrunA17_Chr1g0200491 | 48.901 | 364 | 179 | 6 | 6 | 363 | 10 | 372 | 1.06e-119 | 350 |
| Msa0425900 | MtrunA17_Chr7g0218131 | 46.439 | 351 | 184 | 4 | 16 | 363 | 21 | 370 | 3.77e-111 | 329 |
| Msa0425900 | MtrunA17_Chr7g0218261 | 46.857 | 350 | 183 | 3 | 16 | 363 | 20 | 368 | 1.93e-109 | 324 |
| Msa0425900 | MtrunA17_Chr7g0218181 | 47.727 | 352 | 175 | 6 | 16 | 363 | 21 | 367 | 4.36e-109 | 323 |
| Msa0425900 | MtrunA17_Chr8g0345851 | 53.957 | 278 | 126 | 1 | 88 | 363 | 13 | 290 | 4.93e-108 | 318 |
| Msa0425900 | MtrunA17_Chr7g0218211 | 45.179 | 363 | 193 | 5 | 6 | 363 | 8 | 369 | 3.09e-107 | 319 |
| Msa0425900 | MtrunA17_Chr1g0163601 | 44.350 | 354 | 188 | 5 | 17 | 363 | 19 | 370 | 4.11e-105 | 313 |
| Msa0425900 | MtrunA17_Chr2g0307521 | 44.444 | 351 | 190 | 5 | 16 | 363 | 15 | 363 | 4.17e-105 | 313 |
| Msa0425900 | MtrunA17_Chr1g0163611 | 42.742 | 372 | 202 | 6 | 1 | 363 | 1 | 370 | 2.87e-104 | 311 |
| Msa0425900 | MtrunA17_Chr3g0085201 | 46.875 | 352 | 180 | 6 | 16 | 363 | 9 | 357 | 1.30e-103 | 309 |
| Msa0425900 | MtrunA17_Chr3g0085211 | 46.479 | 355 | 181 | 7 | 14 | 363 | 20 | 370 | 1.51e-102 | 307 |
| Msa0425900 | MtrunA17_Chr1g0163621 | 41.398 | 372 | 206 | 7 | 1 | 363 | 16 | 384 | 7.62e-102 | 305 |
| Msa0425900 | MtrunA17_Chr7g0218301 | 45.938 | 357 | 182 | 7 | 16 | 363 | 21 | 375 | 9.65e-102 | 305 |
| Msa0425900 | MtrunA17_Chr7g0218271 | 45.378 | 357 | 184 | 7 | 16 | 363 | 21 | 375 | 3.59e-101 | 303 |
| Msa0425900 | MtrunA17_Chr2g0314271 | 39.548 | 354 | 202 | 8 | 15 | 363 | 8 | 354 | 2.00e-77 | 242 |
| Msa0425900 | MtrunA17_Chr6g0482291 | 56.522 | 184 | 72 | 1 | 180 | 363 | 1 | 176 | 8.09e-73 | 224 |
| Msa0425900 | MtrunA17_Chr4g0022021 | 39.039 | 333 | 187 | 11 | 36 | 361 | 44 | 367 | 3.67e-72 | 229 |
| Msa0425900 | MtrunA17_Chr3g0130061 | 38.983 | 354 | 205 | 9 | 15 | 363 | 11 | 358 | 2.35e-70 | 224 |
| Msa0425900 | MtrunA17_Chr3g0130011 | 37.322 | 351 | 209 | 8 | 18 | 363 | 14 | 358 | 3.38e-70 | 223 |
| Msa0425900 | MtrunA17_Chr4g0021981 | 36.677 | 319 | 189 | 9 | 36 | 349 | 44 | 354 | 5.02e-68 | 218 |
| Msa0425900 | MtrunA17_Chr3g0121301 | 37.273 | 330 | 192 | 10 | 35 | 359 | 39 | 358 | 1.16e-62 | 204 |
| Msa0425900 | MtrunA17_Chr1g0188391 | 34.568 | 324 | 197 | 8 | 34 | 349 | 31 | 347 | 1.17e-53 | 181 |
| Msa0425900 | MtrunA17_Chr5g0432301 | 31.988 | 322 | 206 | 9 | 34 | 349 | 32 | 346 | 2.23e-49 | 169 |
| Msa0425900 | MtrunA17_Chr7g0219161 | 32.000 | 325 | 210 | 6 | 29 | 349 | 26 | 343 | 1.83e-48 | 167 |
| Msa0425900 | MtrunA17_Chr1g0188371 | 32.344 | 337 | 211 | 9 | 29 | 358 | 26 | 352 | 2.78e-48 | 167 |
| Msa0425900 | MtrunA17_Chr5g0432251 | 32.298 | 322 | 205 | 9 | 34 | 349 | 31 | 345 | 6.32e-48 | 166 |
| Msa0425900 | MtrunA17_Chr5g0432241 | 31.366 | 322 | 208 | 8 | 34 | 349 | 32 | 346 | 4.74e-47 | 163 |
| Msa0425900 | MtrunA17_Chr7g0223241 | 30.790 | 367 | 224 | 11 | 1 | 358 | 1 | 346 | 1.33e-45 | 159 |
| Msa0425900 | MtrunA17_Chr4g0040621 | 31.940 | 335 | 211 | 10 | 34 | 361 | 44 | 368 | 3.47e-45 | 159 |
| Msa0425900 | MtrunA17_Chr7g0219141 | 30.904 | 343 | 224 | 7 | 11 | 349 | 10 | 343 | 6.13e-45 | 158 |
| Msa0425900 | MtrunA17_Chr8g0367401 | 63.303 | 109 | 40 | 0 | 157 | 265 | 2 | 110 | 3.49e-44 | 149 |
| Msa0425900 | MtrunA17_Chr8g0367461 | 55.357 | 112 | 50 | 0 | 252 | 363 | 1 | 112 | 4.47e-44 | 148 |
| Msa0425900 | MtrunA17_Chr5g0432211 | 30.435 | 322 | 197 | 8 | 34 | 349 | 31 | 331 | 2.32e-42 | 150 |
| Msa0425900 | MtrunA17_Chr7g0223231 | 30.000 | 320 | 209 | 7 | 33 | 349 | 29 | 336 | 8.11e-42 | 149 |
| Msa0425900 | MtrunA17_Chr4g0046361 | 32.861 | 353 | 203 | 11 | 17 | 349 | 9 | 347 | 1.97e-41 | 149 |
| Msa0425900 | MtrunA17_Chr4g0046531 | 28.986 | 345 | 227 | 9 | 11 | 349 | 10 | 342 | 3.62e-39 | 147 |
| Msa0425900 | MtrunA17_Chr4g0046531 | 29.565 | 345 | 225 | 9 | 11 | 349 | 372 | 704 | 1.19e-38 | 146 |
| Msa0425900 | MtrunA17_Chr8g0367391 | 51.887 | 106 | 51 | 0 | 258 | 363 | 29 | 134 | 1.09e-38 | 134 |
| Msa0425900 | MtrunA17_Chr5g0432261 | 41.935 | 155 | 86 | 2 | 198 | 349 | 160 | 313 | 1.11e-35 | 132 |
| Msa0425900 | MtrunA17_Chr8g0367481 | 44.604 | 139 | 75 | 1 | 4 | 140 | 16 | 154 | 5.28e-33 | 120 |
| Msa0425900 | MtrunA17_Chr4g0014641 | 31.790 | 324 | 208 | 8 | 34 | 349 | 31 | 349 | 8.16e-33 | 125 |
| Msa0425900 | MtrunA17_Chr4g0046341 | 32.394 | 355 | 205 | 11 | 17 | 349 | 9 | 350 | 3.83e-32 | 124 |
| Msa0425900 | MtrunA17_Chr4g0014661 | 32.203 | 354 | 200 | 12 | 17 | 349 | 9 | 343 | 5.88e-32 | 123 |
| Msa0425900 | MtrunA17_Chr4g0014561 | 30.925 | 346 | 221 | 9 | 17 | 349 | 9 | 349 | 6.87e-32 | 123 |
| Msa0425900 | MtrunA17_Chr4g0014681 | 30.925 | 346 | 221 | 9 | 17 | 349 | 9 | 349 | 1.12e-31 | 122 |
| Msa0425900 | MtrunA17_Chr4g0014591 | 31.921 | 354 | 201 | 12 | 17 | 349 | 9 | 343 | 2.78e-29 | 115 |
| Msa0425900 | MtrunA17_Chr8g0367421 | 49.541 | 109 | 38 | 1 | 157 | 265 | 2 | 93 | 1.77e-28 | 107 |
| Msa0425900 | MtrunA17_Chr1g0170941 | 59.211 | 76 | 31 | 0 | 188 | 263 | 1 | 76 | 2.60e-28 | 105 |
| Msa0425900 | MtrunA17_Chr8g0367411 | 44.186 | 129 | 70 | 1 | 14 | 140 | 5 | 133 | 3.78e-28 | 107 |
| Msa0425900 | MtrunA17_Chr7g0219171 | 40.000 | 120 | 67 | 2 | 233 | 349 | 117 | 234 | 6.23e-23 | 96.3 |
| Msa0425900 | MtrunA17_Chr8g0367471 | 55.263 | 76 | 34 | 0 | 180 | 255 | 1 | 76 | 2.79e-22 | 90.1 |
| Msa0425900 | MtrunA17_Chr6g0482281 | 42.636 | 129 | 70 | 2 | 16 | 140 | 32 | 160 | 6.08e-22 | 92.0 |
| Msa0425900 | MtrunA17_Chr1g0170931 | 36.000 | 125 | 71 | 2 | 21 | 142 | 6 | 124 | 3.17e-20 | 85.5 |
| Msa0425900 | MtrunA17_Chr4g0014601 | 30.112 | 269 | 153 | 10 | 17 | 268 | 9 | 259 | 2.71e-19 | 86.7 |
| Msa0425900 | MtrunA17_Chr4g0011691 | 44.330 | 97 | 51 | 3 | 267 | 361 | 140 | 235 | 1.53e-17 | 80.9 |
| Msa0425900 | MtrunA17_Chr1g0170951 | 46.667 | 75 | 37 | 2 | 274 | 347 | 17 | 89 | 3.13e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425900 | AT5G54160.1 | 76.712 | 365 | 83 | 1 | 1 | 365 | 1 | 363 | 0.0 | 598 |
| Msa0425900 | AT1G51990.2 | 47.143 | 350 | 182 | 3 | 15 | 361 | 11 | 360 | 9.98e-116 | 340 |
| Msa0425900 | AT1G51990.1 | 47.143 | 350 | 182 | 3 | 15 | 361 | 11 | 360 | 2.09e-115 | 340 |
| Msa0425900 | AT1G77520.1 | 45.961 | 359 | 186 | 4 | 13 | 363 | 23 | 381 | 9.94e-115 | 338 |
| Msa0425900 | AT1G33030.1 | 46.154 | 351 | 183 | 5 | 17 | 363 | 2 | 350 | 1.29e-111 | 330 |
| Msa0425900 | AT1G77530.1 | 45.676 | 370 | 189 | 5 | 2 | 363 | 16 | 381 | 1.86e-105 | 315 |
| Msa0425900 | AT1G63140.2 | 45.810 | 358 | 182 | 5 | 16 | 363 | 26 | 381 | 1.75e-100 | 302 |
| Msa0425900 | AT1G63140.4 | 45.810 | 358 | 182 | 5 | 16 | 363 | 46 | 401 | 2.10e-100 | 303 |
| Msa0425900 | AT1G21100.1 | 46.006 | 363 | 183 | 8 | 10 | 363 | 15 | 373 | 9.18e-99 | 298 |
| Msa0425900 | AT1G21130.1 | 45.455 | 363 | 185 | 8 | 10 | 363 | 15 | 373 | 2.44e-98 | 296 |
| Msa0425900 | AT5G53810.1 | 45.294 | 340 | 177 | 5 | 33 | 363 | 39 | 378 | 1.08e-97 | 295 |
| Msa0425900 | AT1G21110.1 | 44.904 | 363 | 187 | 8 | 10 | 363 | 15 | 373 | 2.10e-96 | 291 |
| Msa0425900 | AT1G21120.1 | 45.179 | 363 | 186 | 8 | 10 | 363 | 15 | 373 | 2.64e-96 | 291 |
| Msa0425900 | AT1G21120.2 | 45.179 | 363 | 186 | 8 | 10 | 363 | 63 | 421 | 1.59e-95 | 291 |
| Msa0425900 | AT1G76790.1 | 40.921 | 369 | 198 | 8 | 9 | 364 | 5 | 366 | 1.73e-86 | 266 |
| Msa0425900 | AT3G53140.1 | 38.483 | 356 | 208 | 5 | 15 | 363 | 8 | 359 | 9.85e-76 | 238 |
| Msa0425900 | AT1G33030.3 | 46.875 | 256 | 130 | 5 | 17 | 268 | 2 | 255 | 5.24e-75 | 233 |
| Msa0425900 | AT1G33030.2 | 47.036 | 253 | 128 | 5 | 17 | 265 | 2 | 252 | 1.92e-74 | 231 |
| Msa0425900 | AT5G37170.1 | 40.764 | 314 | 156 | 6 | 54 | 363 | 47 | 334 | 2.68e-72 | 228 |
| Msa0425900 | AT1G63140.1 | 47.104 | 259 | 126 | 4 | 16 | 265 | 46 | 302 | 7.14e-67 | 214 |
| Msa0425900 | AT1G21130.2 | 46.591 | 264 | 129 | 7 | 10 | 265 | 15 | 274 | 7.91e-65 | 208 |
| Msa0425900 | AT1G62900.1 | 50.244 | 205 | 101 | 1 | 160 | 363 | 1 | 205 | 2.10e-64 | 204 |
| Msa0425900 | AT5G37170.2 | 42.797 | 236 | 131 | 3 | 130 | 363 | 1 | 234 | 2.10e-62 | 199 |
| Msa0425900 | AT1G77530.2 | 44.841 | 252 | 128 | 4 | 2 | 246 | 16 | 263 | 2.21e-58 | 191 |
| Msa0425900 | AT5G37170.3 | 48.387 | 186 | 94 | 2 | 180 | 363 | 1 | 186 | 9.33e-58 | 186 |
| Msa0425900 | AT1G63140.3 | 44.167 | 240 | 123 | 4 | 16 | 246 | 46 | 283 | 1.19e-53 | 179 |
| Msa0425900 | AT4G35160.1 | 33.232 | 328 | 199 | 10 | 37 | 350 | 47 | 368 | 1.51e-46 | 163 |
| Msa0425900 | AT4G35150.1 | 38.835 | 206 | 117 | 3 | 154 | 350 | 106 | 311 | 4.37e-45 | 157 |
Find 97 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAAAATATCCCACTATTA+AGG | 0.186659 | 3_2:-76334842 | Msa0425900:CDS |
| GGAAAGATTCAGAGACTTTA+TGG | 0.189226 | 3_2:-76339035 | Msa0425900:CDS |
| TAGTGGTAATTTGAAGAATA+TGG | 0.197261 | 3_2:+76339386 | None:intergenic |
| TTAAGAAGGTTTAAGTTCTT+TGG | 0.249397 | 3_2:-76333790 | Msa0425900:exon |
| CTACATCAACAAGAGATTTA+AGG | 0.256085 | 3_2:+76334899 | None:intergenic |
| GGCTACTGTTGCTAAGTATT+TGG | 0.264695 | 3_2:-76339009 | Msa0425900:CDS |
| ATTCCATTCAACAAGGCTTA+TGG | 0.296668 | 3_2:-76335045 | Msa0425900:CDS |
| TTTGTGGCCAGGCTTGAATC+TGG | 0.323494 | 3_2:+76333965 | None:intergenic |
| TGCTCTTAATCTCATGAATC+AGG | 0.330556 | 3_2:-76338958 | Msa0425900:CDS |
| AAGAGCTGATTTCAAAATCA+TGG | 0.347484 | 3_2:+76339235 | None:intergenic |
| GAAACAATGTTCATTTATAT+AGG | 0.353608 | 3_2:+76333635 | None:intergenic |
| GGACCGAATGTTGCGTCTCT+TGG | 0.369354 | 3_2:-76339102 | Msa0425900:CDS |
| ACCTTGGAATCCAGCACCTT+TGG | 0.375898 | 3_2:+76333859 | None:intergenic |
| AACATTCGGTCCAACATAAC+TGG | 0.384062 | 3_2:+76339113 | None:intergenic |
| CATGAGATTAAGAGCAGAAA+TGG | 0.384733 | 3_2:+76338965 | None:intergenic |
| TTGCTTCTTCATCTGATATG+TGG | 0.386592 | 3_2:+76339297 | None:intergenic |
| AAAATTAATACCCTTAATAG+TGG | 0.390711 | 3_2:+76334831 | None:intergenic |
| TCAAAATATCCCACTATTAA+GGG | 0.393613 | 3_2:-76334841 | Msa0425900:CDS |
| TCCAACATAACTGGTGCATC+AGG | 0.396412 | 3_2:+76339122 | None:intergenic |
| TACAATGGACTTTGAAACCT+TGG | 0.398695 | 3_2:+76333843 | None:intergenic |
| TGCTTCTTCATCTGATATGT+GGG | 0.407456 | 3_2:+76339298 | None:intergenic |
| ATGTGATTTCCACTTCTATT+CGG | 0.409487 | 3_2:-76333695 | Msa0425900:three_prime_UTR |
| GAGGATCTTGCCAAAGGTGC+TGG | 0.410291 | 3_2:-76333869 | Msa0425900:CDS |
| CATCATGGAGTTTCTTAAGA+AGG | 0.412081 | 3_2:-76333804 | Msa0425900:CDS |
| ATCACAACCATGGGTTCAAC+AGG | 0.413894 | 3_2:-76339341 | Msa0425900:exon |
| TTGAAAACCTTGTTAAACCT+TGG | 0.414420 | 3_2:+76334991 | None:intergenic |
| ATGAACATTGTTTCATATTG+TGG | 0.416439 | 3_2:-76333626 | Msa0425900:three_prime_UTR |
| ATTCCATAAGCCTTGTTGAA+TGG | 0.429746 | 3_2:+76335042 | None:intergenic |
| CTAAAAGATGCAGTCCTTGA+TGG | 0.430133 | 3_2:-76335072 | Msa0425900:CDS |
| AGTGGTAATTTGAAGAATAT+GGG | 0.437545 | 3_2:+76339387 | None:intergenic |
| TTAGAAATCATTGCTAAAGC+TGG | 0.441186 | 3_2:-76339200 | Msa0425900:CDS |
| GTTGATGTAGGTGGTGGTAC+TGG | 0.442964 | 3_2:-76334886 | Msa0425900:CDS |
| GATTCAGAGACTTTATGGTT+TGG | 0.453695 | 3_2:-76339030 | Msa0425900:CDS |
| CTTAAATCTCTTGTTGATGT+AGG | 0.455712 | 3_2:-76334898 | Msa0425900:CDS |
| TGTGTTCTCTCTTTCCCACC+TGG | 0.462038 | 3_2:+76333902 | None:intergenic |
| TGTGTAGGAGTTGAGCATGT+TGG | 0.469251 | 3_2:-76334654 | Msa0425900:intron |
| GGTGCATCAGGGTTAGTTGT+TGG | 0.489732 | 3_2:+76339134 | None:intergenic |
| GCCAAAGGTGCTGGATTCCA+AGG | 0.489804 | 3_2:-76333860 | Msa0425900:CDS |
| AGGCTTGAATCTGGAGCCAC+CGG | 0.492120 | 3_2:+76333974 | None:intergenic |
| CCCTGATGCACCAGTTATGT+TGG | 0.494375 | 3_2:-76339123 | Msa0425900:CDS |
| GATTCAAGCCTGGCCACAAA+AGG | 0.496107 | 3_2:-76333962 | Msa0425900:CDS |
| TCTTCATCTGATATGTGGGT+TGG | 0.496254 | 3_2:+76339302 | None:intergenic |
| ATGATGATTAATTAAAGAGC+TGG | 0.496913 | 3_2:+76333575 | None:intergenic |
| AGCTGAGAAGCAATTTCAAT+AGG | 0.497244 | 3_2:+76339158 | None:intergenic |
| TAAAAGATGCAGTCCTTGAT+GGG | 0.498813 | 3_2:-76335071 | Msa0425900:CDS |
| TGTGGCAGAATGCATACTTC+CGG | 0.512468 | 3_2:-76333993 | Msa0425900:CDS |
| AGAGCTGATTTCAAAATCAT+GGG | 0.512858 | 3_2:+76339236 | None:intergenic |
| TATTTGGTTAAGAATGAAGA+TGG | 0.526519 | 3_2:-76338993 | Msa0425900:CDS |
| AAGGCCTTCAAAACCTGTGT+AGG | 0.530395 | 3_2:+76334918 | None:intergenic |
| TATAGTGGATTTGTCATGAC+TGG | 0.531063 | 3_2:-76334084 | Msa0425900:intron |
| ATAAAGTGCTCATGGAAAGC+TGG | 0.532718 | 3_2:-76338935 | Msa0425900:intron |
| TCAGTTCGTACTCAACAAGA+TGG | 0.533052 | 3_2:-76339056 | Msa0425900:CDS |
| GAATCAGGATAAAGTGCTCA+TGG | 0.535381 | 3_2:-76338943 | Msa0425900:CDS |
| TAAACCTTGGATCTGTTCCA+TGG | 0.535558 | 3_2:+76335004 | None:intergenic |
| AAATCTCTTGTTGATGTAGG+TGG | 0.536337 | 3_2:-76334895 | Msa0425900:CDS |
| ACCTCATCAATCACAACCAT+GGG | 0.539236 | 3_2:-76339350 | Msa0425900:exon |
| AAGCCAAGAGACGCAACATT+CGG | 0.541027 | 3_2:+76339099 | None:intergenic |
| TGCTTTCAACACATACATCA+TGG | 0.542854 | 3_2:-76333819 | Msa0425900:CDS |
| AGTTTCACCTGTTGAACCCA+TGG | 0.544126 | 3_2:+76339334 | None:intergenic |
| ATCTGTTCCATGGTATTCAA+AGG | 0.546956 | 3_2:+76335014 | None:intergenic |
| GAAGATGCTCCATCTTATCC+AGG | 0.550163 | 3_2:-76334790 | Msa0425900:intron |
| GTAGGAGTTGAGCATGTTGG+TGG | 0.550218 | 3_2:-76334651 | Msa0425900:intron |
| CAATCCACTTTGCATCATTG+AGG | 0.550885 | 3_2:-76339437 | Msa0425900:five_prime_UTR |
| TGAAGAATATGGGATAATGA+AGG | 0.560541 | 3_2:+76339397 | None:intergenic |
| ATAGGTGAAATTTGAGCACC+AGG | 0.562722 | 3_2:+76339176 | None:intergenic |
| AAATTAATACCCTTAATAGT+GGG | 0.568328 | 3_2:+76334832 | None:intergenic |
| CATGTTTGTCAGTATTCCAA+AGG | 0.570278 | 3_2:-76334625 | Msa0425900:CDS |
| ATCATGTTGGCTCATAATCC+AGG | 0.578789 | 3_2:-76333920 | Msa0425900:CDS |
| GGTGGCTCCAGATTCAAGCC+TGG | 0.579041 | 3_2:-76333972 | Msa0425900:CDS |
| TTGCTAGTTGCATGGCGAAG+AGG | 0.583273 | 3_2:+76339273 | None:intergenic |
| ATGGAGCATCTTCAATGACA+TGG | 0.583754 | 3_2:+76334800 | None:intergenic |
| TGGAGCATCTTCAATGACAT+GGG | 0.584396 | 3_2:+76334801 | None:intergenic |
| AACAGATCCAAGGTTTAACA+AGG | 0.588192 | 3_2:-76334998 | Msa0425900:CDS |
| AATACCATGGAACAGATCCA+AGG | 0.589150 | 3_2:-76335008 | Msa0425900:CDS |
| GATTTCCACTTCTATTCGGT+AGG | 0.592594 | 3_2:-76333691 | Msa0425900:three_prime_UTR |
| AAAATTCTTGAGACCTACAC+AGG | 0.594762 | 3_2:-76334931 | Msa0425900:CDS |
| AACCTCATCAATCACAACCA+TGG | 0.599447 | 3_2:-76339351 | Msa0425900:exon |
| ATCATTGCTAAAGCTGGACC+TGG | 0.610122 | 3_2:-76339194 | Msa0425900:CDS |
| TCACATTGATGTGATCATGT+TGG | 0.610394 | 3_2:-76333933 | Msa0425900:CDS |
| CCAACATAACTGGTGCATCA+GGG | 0.610855 | 3_2:+76339123 | None:intergenic |
| AAAAGATGCAGTCCTTGATG+GGG | 0.614980 | 3_2:-76335070 | Msa0425900:CDS |
| GAGTTTGAGGATCTTGCCAA+AGG | 0.616335 | 3_2:-76333875 | Msa0425900:CDS |
| ATGACAGCCTTTGAATACCA+TGG | 0.623586 | 3_2:-76335021 | Msa0425900:CDS |
| AGACAATGGAAAAGTGATTG+TGG | 0.626581 | 3_2:-76334011 | Msa0425900:CDS |
| TGAAGCACTTGCTAGTTGCA+TGG | 0.631483 | 3_2:+76339265 | None:intergenic |
| TCTCTTGTTGATGTAGGTGG+TGG | 0.632846 | 3_2:-76334892 | Msa0425900:CDS |
| GTGACCTCAATGATGCAAAG+TGG | 0.647973 | 3_2:+76339433 | None:intergenic |
| AAGCCTGGCCACAAAAGGTG+TGG | 0.656446 | 3_2:-76333957 | Msa0425900:CDS |
| GGCAGAATGCATACTTCCGG+TGG | 0.659629 | 3_2:-76333990 | Msa0425900:CDS |
| ACCCATGGTTGTGATTGATG+AGG | 0.666181 | 3_2:+76339349 | None:intergenic |
| GAGTACGAACTGAACAAGTG+AGG | 0.669605 | 3_2:+76339066 | None:intergenic |
| ATGTGTTGAAAGCATTACAA+TGG | 0.671130 | 3_2:+76333828 | None:intergenic |
| ATGTTGGCTCATAATCCAGG+TGG | 0.673281 | 3_2:-76333917 | Msa0425900:CDS |
| TGTTGGCTCATAATCCAGGT+GGG | 0.675248 | 3_2:-76333916 | Msa0425900:CDS |
| AAAGATGCAGTCCTTGATGG+GGG | 0.691221 | 3_2:-76335069 | Msa0425900:CDS |
| TATGAGGCACTACCAGACAA+TGG | 0.700556 | 3_2:-76334025 | Msa0425900:CDS |
| GGAGCATCTTCAATGACATG+GGG | 0.708903 | 3_2:+76334802 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTA+CGG | + | chr3_2:76335460-76335479 | None:intergenic | 0.0% |
| !!! | ATATATATATATATATATTT+TGG | + | chr3_2:76335819-76335838 | None:intergenic | 0.0% |
| !! | AACATATAGATATAATTAAT+GGG | - | chr3_2:76334167-76334186 | Msa0425900:intron | 10.0% |
| !!! | ATTTTTAACATTAATTATAG+GGG | + | chr3_2:76334568-76334587 | None:intergenic | 10.0% |
| !!! | GATTTTTAACATTAATTATA+GGG | + | chr3_2:76334569-76334588 | None:intergenic | 10.0% |
| !!! | AGATTTTTAACATTAATTAT+AGG | + | chr3_2:76334570-76334589 | None:intergenic | 10.0% |
| !!! | TAATGTTAAAAATCTAAAAT+TGG | - | chr3_2:76334575-76334594 | Msa0425900:intron | 10.0% |
| !!! | TGTTTATTTAGTTAATTTTA+TGG | - | chr3_2:76336253-76336272 | Msa0425900:intron | 10.0% |
| !!! | CATATAGTATTAATTAATTT+TGG | - | chr3_2:76336730-76336749 | Msa0425900:intron | 10.0% |
| !!! | ACATATTTTTTTAACTTTTT+TGG | + | chr3_2:76336829-76336848 | None:intergenic | 10.0% |
| !!! | TATATATATATATATTTTGG+TGG | + | chr3_2:76337206-76337225 | None:intergenic | 10.0% |
| !!! | ATAGAATACATTTTTTAATA+TGG | - | chr3_2:76337294-76337313 | Msa0425900:intron | 10.0% |
| !!! | ATAATGATATTATTTTTTTG+AGG | + | chr3_2:76337460-76337479 | None:intergenic | 10.0% |
| !! | TGAAATAAATAATATATGTT+TGG | - | chr3_2:76337607-76337626 | Msa0425900:intron | 10.0% |
| !! | CAACATATAGATATAATTAA+TGG | - | chr3_2:76334166-76334185 | Msa0425900:intron | 15.0% |
| !! | ACATATAGATATAATTAATG+GGG | - | chr3_2:76334168-76334187 | Msa0425900:intron | 15.0% |
| !! | ACAATAACTCTATTTATATA+GGG | - | chr3_2:76334329-76334348 | Msa0425900:intron | 15.0% |
| !!! | AACGAAATATTTTAATATCA+AGG | - | chr3_2:76334433-76334452 | Msa0425900:intron | 15.0% |
| !!! | TTTTTAACATTAATTATAGG+GGG | + | chr3_2:76334567-76334586 | None:intergenic | 15.0% |
| !!! | TGTCTTAAAAGTTTTTTTTT+TGG | + | chr3_2:76334986-76335005 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGCTTACAATTT+AGG | + | chr3_2:76335181-76335200 | None:intergenic | 15.0% |
| !! | AAAATTAGAACATAAAAACT+TGG | - | chr3_2:76335221-76335240 | Msa0425900:intron | 15.0% |
| !!! | CTTTCTACTTTTTTTTTTTA+AGG | + | chr3_2:76335341-76335360 | None:intergenic | 15.0% |
| !! | AAAGTAACAAAATAAACATT+AGG | - | chr3_2:76335357-76335376 | Msa0425900:intron | 15.0% |
| !! | TCATATATATCTTGTAAAAT+AGG | - | chr3_2:76335415-76335434 | Msa0425900:intron | 15.0% |
| !! | TATTAAAAAAACACAATCAA+TGG | - | chr3_2:76336126-76336145 | Msa0425900:intron | 15.0% |
| !!! | TATTTAGTTAATTTTATGGT+TGG | - | chr3_2:76336257-76336276 | Msa0425900:intron | 15.0% |
| !!! | ATTTAGTTAATTTTATGGTT+GGG | - | chr3_2:76336258-76336277 | Msa0425900:intron | 15.0% |
| !! | ATTCATAAGTCAATTAATAA+TGG | + | chr3_2:76336335-76336354 | None:intergenic | 15.0% |
| !!! | TTGATTTATAGTTTTATACA+TGG | - | chr3_2:76336410-76336429 | Msa0425900:intron | 15.0% |
| !!! | AATTTTTTATCAATATCCTA+TGG | - | chr3_2:76337521-76337540 | Msa0425900:intron | 15.0% |
| !! | TATACTATAATCCATTATTT+GGG | + | chr3_2:76337709-76337728 | None:intergenic | 15.0% |
| !! | TTGAAGTATATTAAATGTAA+AGG | + | chr3_2:76338613-76338632 | None:intergenic | 15.0% |
| !!! | TACTACTTTAATTTTTCTAA+TGG | - | chr3_2:76338747-76338766 | Msa0425900:intron | 15.0% |
| !!! | TACTACTTTAATTTTTCTAA+TGG | - | chr3_2:76338747-76338766 | Msa0425900:intron | 15.0% |
| !!! | TTAGAATTTTGATACATTGA+AGG | + | chr3_2:76334241-76334260 | None:intergenic | 20.0% |
| !! | AAAGGATTATTTAAGTGTTA+GGG | + | chr3_2:76334302-76334321 | None:intergenic | 20.0% |
| !! | TAAAGGATTATTTAAGTGTT+AGG | + | chr3_2:76334303-76334322 | None:intergenic | 20.0% |
| !! | CACAATAACTCTATTTATAT+AGG | - | chr3_2:76334328-76334347 | Msa0425900:intron | 20.0% |
| !! | ATAATAAGTAAGTCTATTGA+AGG | - | chr3_2:76334393-76334412 | Msa0425900:intron | 20.0% |
| !! | ATTAACAAAATGCACAATTA+TGG | - | chr3_2:76334465-76334484 | Msa0425900:intron | 20.0% |
| !!! | CATTAAAGACATTTTTTTGA+AGG | + | chr3_2:76334789-76334808 | None:intergenic | 20.0% |
| !! | ACTTATTTATGTGTTAAACA+TGG | + | chr3_2:76334866-76334885 | None:intergenic | 20.0% |
| !! | GGAAAAAAAATAAAACTAAC+TGG | + | chr3_2:76335113-76335132 | None:intergenic | 20.0% |
| !! | CTAAAAATACTCACAAATAT+TGG | + | chr3_2:76335586-76335605 | None:intergenic | 20.0% |
| !!! | TATTTGTTTTGATGCATTAA+TGG | - | chr3_2:76335960-76335979 | Msa0425900:intron | 20.0% |
| !! | AGTAATAAAATGTATGAGAA+AGG | + | chr3_2:76336031-76336050 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTAGAGGATTTTA+TGG | - | chr3_2:76336280-76336299 | Msa0425900:intron | 20.0% |
| !!! | AAAGATCTATCCATTTTTTT+AGG | + | chr3_2:76336768-76336787 | None:intergenic | 20.0% |
| !!! | AATATTTTTGTTACAATGTC+CGG | + | chr3_2:76336872-76336891 | None:intergenic | 20.0% |
| !!! | AAAAACTACCATTTTTCATT+AGG | + | chr3_2:76336975-76336994 | None:intergenic | 20.0% |
| !! | TCTTATTCAAACATTAAACA+TGG | + | chr3_2:76337042-76337061 | None:intergenic | 20.0% |
| !!! | ATAAGAGTATTTGAAGTAAA+AGG | - | chr3_2:76337056-76337075 | Msa0425900:intron | 20.0% |
| !! | GACAATTTATAATATATGCA+AGG | - | chr3_2:76337158-76337177 | Msa0425900:intron | 20.0% |
| !! | TAAGTTAATTAACTTTGTTG+TGG | - | chr3_2:76337486-76337505 | Msa0425900:intron | 20.0% |
| !! | GTATACTATAATCCATTATT+TGG | + | chr3_2:76337710-76337729 | None:intergenic | 20.0% |
| !!! | CATAAAAAGACTTTCTATTT+TGG | - | chr3_2:76337818-76337837 | Msa0425900:intron | 20.0% |
| !! | AAATTAATACCCTTAATAGT+GGG | + | chr3_2:76338172-76338191 | None:intergenic | 20.0% |
| !! | AAAATTAATACCCTTAATAG+TGG | + | chr3_2:76338173-76338192 | None:intergenic | 20.0% |
| !! | TAAACTTAAGAAAAAATACC+TGG | + | chr3_2:76338232-76338251 | None:intergenic | 20.0% |
| !!! | ATACTAATTGTTTAAGACAA+TGG | + | chr3_2:76338259-76338278 | None:intergenic | 20.0% |
| !!! | ATCATTTTATATGCATATAG+TGG | - | chr3_2:76338787-76338806 | Msa0425900:intron | 20.0% |
| !!! | ATCATTTTATATGCATATAG+TGG | - | chr3_2:76338787-76338806 | Msa0425900:intron | 20.0% |
| !!! | TGGAAATCACATATTTTTAT+GGG | + | chr3_2:76339298-76339317 | None:intergenic | 20.0% |
| !! | GAAACAATGTTCATTTATAT+AGG | + | chr3_2:76339369-76339388 | None:intergenic | 20.0% |
| ! | AGTGGTAATTTGAAGAATAT+GGG | + | chr3_2:76333617-76333636 | None:intergenic | 25.0% |
| ! | TAGTGGTAATTTGAAGAATA+TGG | + | chr3_2:76333618-76333637 | None:intergenic | 25.0% |
| ! | TATTTGGTTAAGAATGAAGA+TGG | - | chr3_2:76334008-76334027 | Msa0425900:CDS | 25.0% |
| !! | TAATGGGGTAATAATCATTT+TGG | - | chr3_2:76334183-76334202 | Msa0425900:intron | 25.0% |
| ! | AGAGTTATTGTGAGTATTAA+AGG | + | chr3_2:76334320-76334339 | None:intergenic | 25.0% |
| ! | ACAATAAGTAAGTACGTATA+AGG | - | chr3_2:76334361-76334380 | Msa0425900:intron | 25.0% |
| !! | TTTGAAATTTCGATACATTG+AGG | - | chr3_2:76334493-76334512 | Msa0425900:intron | 25.0% |
| ! | TTGAAATTTCGATACATTGA+GGG | - | chr3_2:76334494-76334513 | Msa0425900:intron | 25.0% |
| ! | TTATAAGTGATAGATAGTTC+TGG | - | chr3_2:76334622-76334641 | Msa0425900:CDS | 25.0% |
| ! | TATCATTAAAGAACATGTCT+AGG | + | chr3_2:76334762-76334781 | None:intergenic | 25.0% |
| ! | TTTGTCAAAATACTCAAAAG+TGG | + | chr3_2:76334933-76334952 | None:intergenic | 25.0% |
| ! | ATTAGAACATAAAAACTTGG+TGG | - | chr3_2:76335224-76335243 | Msa0425900:intron | 25.0% |
| !! | AAACATTAGGAGTATACATT+AGG | - | chr3_2:76335370-76335389 | Msa0425900:intron | 25.0% |
| ! | AAAATACTCACAAATATTGG+AGG | + | chr3_2:76335583-76335602 | None:intergenic | 25.0% |
| !!! | GTATTTTTAGAATATGTGTG+AGG | - | chr3_2:76335596-76335615 | Msa0425900:intron | 25.0% |
| ! | ACAAAACAAACATAAGCATA+TGG | - | chr3_2:76335746-76335765 | Msa0425900:intron | 25.0% |
| ! | ACGTAGTTGTCAATTTAAAT+CGG | + | chr3_2:76335919-76335938 | None:intergenic | 25.0% |
| !! | GAAGTGTATAATTAGTTTCT+TGG | - | chr3_2:76335992-76336011 | Msa0425900:intron | 25.0% |
| !! | ATACATTTTATTACTCTGCA+GGG | - | chr3_2:76336036-76336055 | Msa0425900:intron | 25.0% |
| !! | ATGAAATGTTTTCATTTGCA+CGG | - | chr3_2:76336157-76336176 | Msa0425900:intron | 25.0% |
| !! | AAGTTTTTATCACTCCATAA+TGG | - | chr3_2:76336208-76336227 | Msa0425900:intron | 25.0% |
| !!! | TTTTAGAGGATTTTATGGTA+AGG | - | chr3_2:76336285-76336304 | Msa0425900:intron | 25.0% |
| !! | TTTAGAGGATTTTATGGTAA+GGG | - | chr3_2:76336286-76336305 | Msa0425900:intron | 25.0% |
| ! | AGATTTGGATTTAGAAATAG+CGG | - | chr3_2:76336366-76336385 | Msa0425900:intron | 25.0% |
| ! | TTCATATTGCTATAGGAATT+TGG | + | chr3_2:76336599-76336618 | None:intergenic | 25.0% |
| !! | CTTTGAACTTTAAGAAAACT+TGG | - | chr3_2:76336784-76336803 | Msa0425900:intron | 25.0% |
| !! | AACTTTAAGAAAACTTGGTT+TGG | - | chr3_2:76336789-76336808 | Msa0425900:intron | 25.0% |
| !! | TAGAATTTGTTTAATCACAC+CGG | - | chr3_2:76336850-76336869 | Msa0425900:intron | 25.0% |
| ! | TTTATAATATATGCAAGGTC+CGG | - | chr3_2:76337163-76337182 | Msa0425900:intron | 25.0% |
| !!! | GAAATAATCACTCACTTTTA+AGG | + | chr3_2:76337329-76337348 | None:intergenic | 25.0% |
| ! | AGATTAAAATCCTAATCACA+TGG | + | chr3_2:76337576-76337595 | None:intergenic | 25.0% |
| ! | TTATTTATTTCATACACCAC+TGG | + | chr3_2:76337599-76337618 | None:intergenic | 25.0% |
| !!! | CAAGAGAGATTTTTTTTTGA+GGG | + | chr3_2:76337754-76337773 | None:intergenic | 25.0% |
| !!! | TCAAGAGAGATTTTTTTTTG+AGG | + | chr3_2:76337755-76337774 | None:intergenic | 25.0% |
| !! | ATGTCATCTTTTTCTTAAGA+AGG | + | chr3_2:76337801-76337820 | None:intergenic | 25.0% |
| !! | TTTAACAAGGTTTTCAACAA+GGG | - | chr3_2:76338016-76338035 | Msa0425900:intron | 25.0% |
| !! | AAGAATTTTCTTCATTGTGA+TGG | + | chr3_2:76338059-76338078 | None:intergenic | 25.0% |
| ! | TCAAAATATCCCACTATTAA+GGG | - | chr3_2:76338160-76338179 | Msa0425900:intron | 25.0% |
| !! | TAACATTTGATGTTTTGTGT+AGG | - | chr3_2:76338332-76338351 | Msa0425900:intron | 25.0% |
| ! | TTATGTTAGCATAAAGAAGA+AGG | + | chr3_2:76338464-76338483 | None:intergenic | 25.0% |
| !! | GCTAATTTTATACAAACAAG+AGG | + | chr3_2:76338644-76338663 | None:intergenic | 25.0% |
| ! | GAAATGCAATGAAAGAAATT+AGG | - | chr3_2:76338692-76338711 | Msa0425900:intron | 25.0% |
| !! | TTAAGAAGGTTTAAGTTCTT+TGG | - | chr3_2:76339211-76339230 | Msa0425900:CDS | 25.0% |
| !!! | GGAAATCACATATTTTTATG+GGG | + | chr3_2:76339297-76339316 | None:intergenic | 25.0% |
| !!! | GTGGAAATCACATATTTTTA+TGG | + | chr3_2:76339299-76339318 | None:intergenic | 25.0% |
| ! | ATGAACATTGTTTCATATTG+TGG | - | chr3_2:76339375-76339394 | Msa0425900:five_prime_UTR | 25.0% |
| ! | ATGATGATTAATTAAAGAGC+TGG | + | chr3_2:76339429-76339448 | None:intergenic | 25.0% |
| TGAAGAATATGGGATAATGA+AGG | + | chr3_2:76333607-76333626 | None:intergenic | 30.0% | |
| ! | AGAGCTGATTTCAAAATCAT+GGG | + | chr3_2:76333768-76333787 | None:intergenic | 30.0% |
| ! | AAGAGCTGATTTCAAAATCA+TGG | + | chr3_2:76333769-76333788 | None:intergenic | 30.0% |
| TTAGAAATCATTGCTAAAGC+TGG | - | chr3_2:76333801-76333820 | Msa0425900:CDS | 30.0% | |
| !!! | GACTATTTTGACTAACAAAG+TGG | + | chr3_2:76334280-76334299 | None:intergenic | 30.0% |
| CTCGTCTTAGAATTAGAATT+TGG | + | chr3_2:76334688-76334707 | None:intergenic | 30.0% | |
| !! | CAAATTCTAATTCTAAGACG+AGG | - | chr3_2:76334686-76334705 | Msa0425900:intron | 30.0% |
| ATTAAAGAACATGTCTAGGT+CGG | + | chr3_2:76334758-76334777 | None:intergenic | 30.0% | |
| AATTGAAAACTAGCAGCATA+TGG | - | chr3_2:76334811-76334830 | Msa0425900:CDS | 30.0% | |
| AATAAGTGACCAAAGATGAT+TGG | - | chr3_2:76334879-76334898 | Msa0425900:CDS | 30.0% | |
| ATGTGAGAGTTAGCAAAAAA+AGG | - | chr3_2:76335064-76335083 | Msa0425900:CDS | 30.0% | |
| TAACTTACTTGAATAACCGT+CGG | + | chr3_2:76335146-76335165 | None:intergenic | 30.0% | |
| ! | CATACATTTTATTACTCTGC+AGG | - | chr3_2:76336035-76336054 | Msa0425900:intron | 30.0% |
| ! | TACATTTTATTACTCTGCAG+GGG | - | chr3_2:76336037-76336056 | Msa0425900:intron | 30.0% |
| ! | TGAAATGTTTTCATTTGCAC+GGG | - | chr3_2:76336158-76336177 | Msa0425900:intron | 30.0% |
| TTTCTTCGAAAGAACCATTA+TGG | + | chr3_2:76336225-76336244 | None:intergenic | 30.0% | |
| !!! | TATGGTTGGGTTTTTTTTAG+AGG | - | chr3_2:76336271-76336290 | Msa0425900:intron | 30.0% |
| GAATATAGTGTCGTAAGATT+TGG | - | chr3_2:76336351-76336370 | Msa0425900:intron | 30.0% | |
| ! | GATTTAGAAATAGCGGAAAT+GGG | - | chr3_2:76336373-76336392 | Msa0425900:intron | 30.0% |
| AGAAATGTTGAATAGTGAGT+TGG | + | chr3_2:76336526-76336545 | None:intergenic | 30.0% | |
| CTAACTGTTCATATTGCTAT+AGG | + | chr3_2:76336606-76336625 | None:intergenic | 30.0% | |
| ! | AGTCTTGAGCTTTAACAAAT+TGG | + | chr3_2:76336645-76336664 | None:intergenic | 30.0% |
| ! | GTTAAAGCTCAAGACTATTT+TGG | - | chr3_2:76336649-76336668 | Msa0425900:intron | 30.0% |
| CTCAGATAAGCCTAAAAAAA+TGG | - | chr3_2:76336755-76336774 | Msa0425900:intron | 30.0% | |
| !! | GTTCTAGTTTACATTGTTAG+AGG | - | chr3_2:76337013-76337032 | Msa0425900:intron | 30.0% |
| TTATAATATATGCAAGGTCC+GGG | - | chr3_2:76337164-76337183 | Msa0425900:intron | 30.0% | |
| !!! | ATATATATTTTGGTGGTGAC+CGG | + | chr3_2:76337199-76337218 | None:intergenic | 30.0% |
| TTATCTTTCATTCATGCCAT+AGG | + | chr3_2:76337540-76337559 | None:intergenic | 30.0% | |
| GATATCTTAACCATGTGATT+AGG | - | chr3_2:76337563-76337582 | Msa0425900:intron | 30.0% | |
| !! | ATTAGGATTTTAATCTCCAG+TGG | - | chr3_2:76337580-76337599 | Msa0425900:intron | 30.0% |
| ! | TCCATTATTTGGGTTAACTT+CGG | + | chr3_2:76337699-76337718 | None:intergenic | 30.0% |
| TTGAAAACCTTGTTAAACCT+TGG | + | chr3_2:76338013-76338032 | None:intergenic | 30.0% | |
| ! | GTTTAACAAGGTTTTCAACA+AGG | - | chr3_2:76338015-76338034 | Msa0425900:intron | 30.0% |
| ! | TTAACAAGGTTTTCAACAAG+GGG | - | chr3_2:76338017-76338036 | Msa0425900:intron | 30.0% |
| CTACATCAACAAGAGATTTA+AGG | + | chr3_2:76338105-76338124 | None:intergenic | 30.0% | |
| CTTAAATCTCTTGTTGATGT+AGG | - | chr3_2:76338103-76338122 | Msa0425900:intron | 30.0% | |
| CTCAAAATATCCCACTATTA+AGG | - | chr3_2:76338159-76338178 | Msa0425900:intron | 30.0% | |
| GAAAAAATACCTGGATAAGA+TGG | + | chr3_2:76338223-76338242 | None:intergenic | 30.0% | |
| !! | ATGCATAACACAGTTGTTTT+AGG | - | chr3_2:76338581-76338600 | Msa0425900:intron | 30.0% |
| TGCATTTCTAAATCTAGTGA+CGG | + | chr3_2:76338680-76338699 | None:intergenic | 30.0% | |
| !! | ATTTTTGAAGAACTGCTATG+AGG | - | chr3_2:76338960-76338979 | Msa0425900:CDS | 30.0% |
| !! | ATGTGTTGAAAGCATTACAA+TGG | + | chr3_2:76339176-76339195 | None:intergenic | 30.0% |
| !! | GAGTTTTGATATTGAGATTG+TGG | - | chr3_2:76339246-76339265 | Msa0425900:CDS | 30.0% |
| !! | TATTTTTATGGGGAAAGCTT+AGG | + | chr3_2:76339287-76339306 | None:intergenic | 30.0% |
| ATGTGATTTCCACTTCTATT+CGG | - | chr3_2:76339306-76339325 | Msa0425900:CDS | 30.0% | |
| ! | AGGTTTTTGTGAGATTGTAG+TGG | + | chr3_2:76333635-76333654 | None:intergenic | 35.0% |
| TGCTTCTTCATCTGATATGT+GGG | + | chr3_2:76333706-76333725 | None:intergenic | 35.0% | |
| TTGCTTCTTCATCTGATATG+TGG | + | chr3_2:76333707-76333726 | None:intergenic | 35.0% | |
| AGCTGAGAAGCAATTTCAAT+AGG | + | chr3_2:76333846-76333865 | None:intergenic | 35.0% | |
| GGAAAGATTCAGAGACTTTA+TGG | - | chr3_2:76333966-76333985 | Msa0425900:CDS | 35.0% | |
| GATTCAGAGACTTTATGGTT+TGG | - | chr3_2:76333971-76333990 | Msa0425900:CDS | 35.0% | |
| CATGAGATTAAGAGCAGAAA+TGG | + | chr3_2:76334039-76334058 | None:intergenic | 35.0% | |
| TGCTCTTAATCTCATGAATC+AGG | - | chr3_2:76334043-76334062 | Msa0425900:CDS | 35.0% | |
| CAGAGTAAAAAACAGAGCTT+AGG | + | chr3_2:76334105-76334124 | None:intergenic | 35.0% | |
| ACTAACAAAGTGGACAATCA+GGG | + | chr3_2:76334270-76334289 | None:intergenic | 35.0% | |
| TCTAGGTCGGATTAAACATT+TGG | + | chr3_2:76334745-76334764 | None:intergenic | 35.0% | |
| ACAACCTAACCAATCATCTT+TGG | + | chr3_2:76334891-76334910 | None:intergenic | 35.0% | |
| TAACTCTCACATATTGTCGT+GGG | + | chr3_2:76335056-76335075 | None:intergenic | 35.0% | |
| ! | TGCTTACAATTTAGGACGAA+AGG | + | chr3_2:76335173-76335192 | None:intergenic | 35.0% |
| TACTCACAAATATTGGAGGA+TGG | + | chr3_2:76335579-76335598 | None:intergenic | 35.0% | |
| CTTTATGTAAGCATGATCGT+GGG | - | chr3_2:76335886-76335905 | Msa0425900:intron | 35.0% | |
| ! | GGATTTAGAAATAGCGGAAA+TGG | - | chr3_2:76336372-76336391 | Msa0425900:intron | 35.0% |
| ! | ACATTATGATGATGACCTAG+AGG | - | chr3_2:76336478-76336497 | Msa0425900:intron | 35.0% |
| ! | CATTATGATGATGACCTAGA+GGG | - | chr3_2:76336479-76336498 | Msa0425900:intron | 35.0% |
| ! | AATGTTGAATAGTGAGTTGG+TGG | + | chr3_2:76336523-76336542 | None:intergenic | 35.0% |
| !! | AATATTGGTTCACACTCCAT+TGG | + | chr3_2:76336564-76336583 | None:intergenic | 35.0% |
| TGGAAGCTTTACAGGAATAT+TGG | + | chr3_2:76336579-76336598 | None:intergenic | 35.0% | |
| TAGGAATTTGGAAGCTTTAC+AGG | + | chr3_2:76336587-76336606 | None:intergenic | 35.0% | |
| TATAATATATGCAAGGTCCG+GGG | - | chr3_2:76337165-76337184 | Msa0425900:intron | 35.0% | |
| !!! | TATATATTTTGGTGGTGACC+GGG | + | chr3_2:76337198-76337217 | None:intergenic | 35.0% |
| TAAAAGATGCAGTCCTTGAT+GGG | - | chr3_2:76337930-76337949 | Msa0425900:intron | 35.0% | |
| ATTCCATTCAACAAGGCTTA+TGG | - | chr3_2:76337956-76337975 | Msa0425900:intron | 35.0% | |
| !! | ATTCCATAAGCCTTGTTGAA+TGG | + | chr3_2:76337962-76337981 | None:intergenic | 35.0% |
| ATCTGTTCCATGGTATTCAA+AGG | + | chr3_2:76337990-76338009 | None:intergenic | 35.0% | |
| AACAGATCCAAGGTTTAACA+AGG | - | chr3_2:76338003-76338022 | Msa0425900:intron | 35.0% | |
| AAAATTCTTGAGACCTACAC+AGG | - | chr3_2:76338070-76338089 | Msa0425900:intron | 35.0% | |
| AAATCTCTTGTTGATGTAGG+TGG | - | chr3_2:76338106-76338125 | Msa0425900:intron | 35.0% | |
| CATGTTTGTCAGTATTCCAA+AGG | - | chr3_2:76338376-76338395 | Msa0425900:intron | 35.0% | |
| ATAAAAACAGCATCAGCCTT+TGG | + | chr3_2:76338395-76338414 | None:intergenic | 35.0% | |
| ATGTTCTCTATCTTAGGTGT+CGG | + | chr3_2:76338498-76338517 | None:intergenic | 35.0% | |
| ACCTAAGATAGAGAACATGT+TGG | - | chr3_2:76338500-76338519 | Msa0425900:intron | 35.0% | |
| CCTAAGATAGAGAACATGTT+GGG | - | chr3_2:76338501-76338520 | Msa0425900:intron | 35.0% | |
| CAACTGTGTTATGCATAACA+CGG | + | chr3_2:76338577-76338596 | None:intergenic | 35.0% | |
| !! | TATAGTGGATTTGTCATGAC+TGG | - | chr3_2:76338802-76338821 | Msa0425900:intron | 35.0% |
| !! | TATAGTGGATTTGTCATGAC+TGG | - | chr3_2:76338802-76338821 | Msa0425900:intron | 35.0% |
| !! | ACAATCACTTTTCCATTGTC+TGG | + | chr3_2:76338991-76339010 | None:intergenic | 35.0% |
| AGACAATGGAAAAGTGATTG+TGG | - | chr3_2:76338990-76339009 | Msa0425900:CDS | 35.0% | |
| TCACATTGATGTGATCATGT+TGG | - | chr3_2:76339068-76339087 | Msa0425900:CDS | 35.0% | |
| GAGAACACAAAAAGAGTTTG+AGG | - | chr3_2:76339113-76339132 | Msa0425900:CDS | 35.0% | |
| !! | TACAATGGACTTTGAAACCT+TGG | + | chr3_2:76339161-76339180 | None:intergenic | 35.0% |
| TGCTTTCAACACATACATCA+TGG | - | chr3_2:76339182-76339201 | Msa0425900:CDS | 35.0% | |
| CATCATGGAGTTTCTTAAGA+AGG | - | chr3_2:76339197-76339216 | Msa0425900:CDS | 35.0% | |
| ! | ATTTTCCTACCGAATAGAAG+TGG | + | chr3_2:76339318-76339337 | None:intergenic | 35.0% |
| CAATCCACTTTGCATCATTG+AGG | - | chr3_2:76333564-76333583 | Msa0425900:three_prime_UTR | 40.0% | |
| AACCTCATCAATCACAACCA+TGG | - | chr3_2:76333650-76333669 | Msa0425900:three_prime_UTR | 40.0% | |
| ACCTCATCAATCACAACCAT+GGG | - | chr3_2:76333651-76333670 | Msa0425900:three_prime_UTR | 40.0% | |
| TCTTCATCTGATATGTGGGT+TGG | + | chr3_2:76333702-76333721 | None:intergenic | 40.0% | |
| ATAGGTGAAATTTGAGCACC+AGG | + | chr3_2:76333828-76333847 | None:intergenic | 40.0% | |
| AACATTCGGTCCAACATAAC+TGG | + | chr3_2:76333891-76333910 | None:intergenic | 40.0% | |
| TCAGTTCGTACTCAACAAGA+TGG | - | chr3_2:76333945-76333964 | Msa0425900:CDS | 40.0% | |
| GGCTACTGTTGCTAAGTATT+TGG | - | chr3_2:76333992-76334011 | Msa0425900:CDS | 40.0% | |
| ! | GAATCAGGATAAAGTGCTCA+TGG | - | chr3_2:76334058-76334077 | Msa0425900:CDS | 40.0% |
| ! | ATAAAGTGCTCATGGAAAGC+TGG | - | chr3_2:76334066-76334085 | Msa0425900:CDS | 40.0% |
| ! | TGCTCTGTTCTCTGTTTTGT+TGG | - | chr3_2:76334134-76334153 | Msa0425900:intron | 40.0% |
| GACTAACAAAGTGGACAATC+AGG | + | chr3_2:76334271-76334290 | None:intergenic | 40.0% | |
| TTACTATTCGTTCCTCGTTC+AGG | - | chr3_2:76334524-76334543 | Msa0425900:intron | 40.0% | |
| TACTATTCGTTCCTCGTTCA+GGG | - | chr3_2:76334525-76334544 | Msa0425900:intron | 40.0% | |
| ! | ACGAGGTTAGAGTCATCTTT+TGG | - | chr3_2:76334703-76334722 | Msa0425900:intron | 40.0% |
| ! | GTGACCAAAGATGATTGGTT+AGG | - | chr3_2:76334884-76334903 | Msa0425900:CDS | 40.0% |
| CTAACTCTCACATATTGTCG+TGG | + | chr3_2:76335057-76335076 | None:intergenic | 40.0% | |
| ! | TTTTCCTTCTCTCTTTCCGA+CGG | - | chr3_2:76335127-76335146 | Msa0425900:intron | 40.0% |
| TGTTGAGTAACACACGCATA+CGG | - | chr3_2:76335665-76335684 | Msa0425900:intron | 40.0% | |
| GCTTTATGTAAGCATGATCG+TGG | - | chr3_2:76335885-76335904 | Msa0425900:intron | 40.0% | |
| ! | TTTTATTACTCTGCAGGGGT+TGG | - | chr3_2:76336041-76336060 | Msa0425900:intron | 40.0% |
| ! | AATGTTTTCATTTGCACGGG+AGG | - | chr3_2:76336161-76336180 | Msa0425900:intron | 40.0% |
| ! | GCTTTTGACGTTAGTGTTTG+TGG | + | chr3_2:76336447-76336466 | None:intergenic | 40.0% |
| !!! | ATATATTTTGGTGGTGACCG+GGG | + | chr3_2:76337197-76337216 | None:intergenic | 40.0% |
| ! | GCATCTTGAGTGATTAGTCA+TGG | - | chr3_2:76337657-76337676 | Msa0425900:intron | 40.0% |
| GCCGAAGTTAACCCAAATAA+TGG | - | chr3_2:76337695-76337714 | Msa0425900:intron | 40.0% | |
| AGAATGTGTGTGCAATTGGA+AGG | + | chr3_2:76337858-76337877 | None:intergenic | 40.0% | |
| AGAGAGAATGTGTGTGCAAT+TGG | + | chr3_2:76337862-76337881 | None:intergenic | 40.0% | |
| CCTACAATGAGTAAGGACTA+AGG | + | chr3_2:76337903-76337922 | None:intergenic | 40.0% | |
| CCTTAGTCCTTACTCATTGT+AGG | - | chr3_2:76337900-76337919 | Msa0425900:intron | 40.0% | |
| ! | CATCAAGGACTGCATCTTTT+AGG | + | chr3_2:76337931-76337950 | None:intergenic | 40.0% |
| CTAAAAGATGCAGTCCTTGA+TGG | - | chr3_2:76337929-76337948 | Msa0425900:intron | 40.0% | |
| AAAAGATGCAGTCCTTGATG+GGG | - | chr3_2:76337931-76337950 | Msa0425900:intron | 40.0% | |
| ATGACAGCCTTTGAATACCA+TGG | - | chr3_2:76337980-76337999 | Msa0425900:intron | 40.0% | |
| AATACCATGGAACAGATCCA+AGG | - | chr3_2:76337993-76338012 | Msa0425900:intron | 40.0% | |
| TAAACCTTGGATCTGTTCCA+TGG | + | chr3_2:76338000-76338019 | None:intergenic | 40.0% | |
| ! | TGGAGCATCTTCAATGACAT+GGG | + | chr3_2:76338203-76338222 | None:intergenic | 40.0% |
| ! | ATGGAGCATCTTCAATGACA+TGG | + | chr3_2:76338204-76338223 | None:intergenic | 40.0% |
| !!! | GGCTGATGCTGTTTTTATGA+AGG | - | chr3_2:76338397-76338416 | Msa0425900:intron | 40.0% |
| AAGGCCAGATGATTGTGTTA+GGG | + | chr3_2:76338445-76338464 | None:intergenic | 40.0% | |
| CCCAACATGTTCTCTATCTT+AGG | + | chr3_2:76338504-76338523 | None:intergenic | 40.0% | |
| ! | AATGTGAACCACACCTTTTG+TGG | + | chr3_2:76339055-76339074 | None:intergenic | 40.0% |
| !! | ATCATGTTGGCTCATAATCC+AGG | - | chr3_2:76339081-76339100 | Msa0425900:CDS | 40.0% |
| GATTTCCACTTCTATTCGGT+AGG | - | chr3_2:76339310-76339329 | Msa0425900:CDS | 40.0% | |
| GTGACCTCAATGATGCAAAG+TGG | + | chr3_2:76333571-76333590 | None:intergenic | 45.0% | |
| ACCCATGGTTGTGATTGATG+AGG | + | chr3_2:76333655-76333674 | None:intergenic | 45.0% | |
| ATCACAACCATGGGTTCAAC+AGG | - | chr3_2:76333660-76333679 | Msa0425900:three_prime_UTR | 45.0% | |
| AGTTTCACCTGTTGAACCCA+TGG | + | chr3_2:76333670-76333689 | None:intergenic | 45.0% | |
| ! | TGAAGCACTTGCTAGTTGCA+TGG | + | chr3_2:76333739-76333758 | None:intergenic | 45.0% |
| ATCATTGCTAAAGCTGGACC+TGG | - | chr3_2:76333807-76333826 | Msa0425900:CDS | 45.0% | |
| CCAACATAACTGGTGCATCA+GGG | + | chr3_2:76333881-76333900 | None:intergenic | 45.0% | |
| TCCAACATAACTGGTGCATC+AGG | + | chr3_2:76333882-76333901 | None:intergenic | 45.0% | |
| AAGCCAAGAGACGCAACATT+CGG | + | chr3_2:76333905-76333924 | None:intergenic | 45.0% | |
| GAGTACGAACTGAACAAGTG+AGG | + | chr3_2:76333938-76333957 | None:intergenic | 45.0% | |
| ATAACCGTCGGAAAGAGAGA+AGG | + | chr3_2:76335134-76335153 | None:intergenic | 45.0% | |
| ! | CGAGCTTATCTCAGTTGGTA+AGG | - | chr3_2:76335697-76335716 | Msa0425900:intron | 45.0% |
| TCAAAAATGAGGGTCCCTCT+AGG | + | chr3_2:76336496-76336515 | None:intergenic | 45.0% | |
| TGGTGGCCACTCAAAAATGA+GGG | + | chr3_2:76336506-76336525 | None:intergenic | 45.0% | |
| ! | TTGGTGGCCACTCAAAAATG+AGG | + | chr3_2:76336507-76336526 | None:intergenic | 45.0% |
| ! | ATTGGTTCACACTCCATTGG+CGG | + | chr3_2:76336561-76336580 | None:intergenic | 45.0% |
| GGGTTGGGCCTAATGAAAAA+TGG | - | chr3_2:76336964-76336983 | Msa0425900:intron | 45.0% | |
| TTGTCCTCGCTTAACTCAGT+TGG | - | chr3_2:76337131-76337150 | Msa0425900:intron | 45.0% | |
| CATACCAACTGAGTTAAGCG+AGG | + | chr3_2:76337138-76337157 | None:intergenic | 45.0% | |
| ! | CTCGCTTAACTCAGTTGGTA+TGG | - | chr3_2:76337136-76337155 | Msa0425900:intron | 45.0% |
| GGTGGTACCTACAATGAGTA+AGG | + | chr3_2:76337910-76337929 | None:intergenic | 45.0% | |
| ! | CAAGGACTGCATCTTTTAGG+TGG | + | chr3_2:76337928-76337947 | None:intergenic | 45.0% |
| AAAGATGCAGTCCTTGATGG+GGG | - | chr3_2:76337932-76337951 | Msa0425900:intron | 45.0% | |
| !! | GAGACCTACACAGGTTTTGA+AGG | - | chr3_2:76338079-76338098 | Msa0425900:intron | 45.0% |
| AAGGCCTTCAAAACCTGTGT+AGG | + | chr3_2:76338086-76338105 | None:intergenic | 45.0% | |
| TCTCTTGTTGATGTAGGTGG+TGG | - | chr3_2:76338109-76338128 | Msa0425900:intron | 45.0% | |
| ! | GGAGCATCTTCAATGACATG+GGG | + | chr3_2:76338202-76338221 | None:intergenic | 45.0% |
| GAAGATGCTCCATCTTATCC+AGG | - | chr3_2:76338211-76338230 | Msa0425900:intron | 45.0% | |
| TGTGTAGGAGTTGAGCATGT+TGG | - | chr3_2:76338347-76338366 | Msa0425900:intron | 45.0% | |
| CCAGATGATTGTGTTAGGGT+AGG | + | chr3_2:76338441-76338460 | None:intergenic | 45.0% | |
| CCTACCCTAACACAATCATC+TGG | - | chr3_2:76338438-76338457 | Msa0425900:intron | 45.0% | |
| GAAGGCCAGATGATTGTGTT+AGG | + | chr3_2:76338446-76338465 | None:intergenic | 45.0% | |
| ! | TATGAGGCACTACCAGACAA+TGG | - | chr3_2:76338976-76338995 | Msa0425900:CDS | 45.0% |
| TGTGGCAGAATGCATACTTC+CGG | - | chr3_2:76339008-76339027 | Msa0425900:CDS | 45.0% | |
| !! | ATGTTGGCTCATAATCCAGG+TGG | - | chr3_2:76339084-76339103 | Msa0425900:CDS | 45.0% |
| !! | TGTTGGCTCATAATCCAGGT+GGG | - | chr3_2:76339085-76339104 | Msa0425900:CDS | 45.0% |
| GAGTTTGAGGATCTTGCCAA+AGG | - | chr3_2:76339126-76339145 | Msa0425900:CDS | 45.0% | |
| !!! | GTTTTTTTATTTTATATTTA+AGG | + | chr3_2:76335030-76335049 | None:intergenic | 5.0% |
| !!! | ATATAGTATTAATTAATTTT+GGG | - | chr3_2:76336731-76336750 | Msa0425900:intron | 5.0% |
| TTGCTAGTTGCATGGCGAAG+AGG | + | chr3_2:76333731-76333750 | None:intergenic | 50.0% | |
| !! | GGTGCATCAGGGTTAGTTGT+TGG | + | chr3_2:76333870-76333889 | None:intergenic | 50.0% |
| CCCTGATGCACCAGTTATGT+TGG | - | chr3_2:76333878-76333897 | Msa0425900:CDS | 50.0% | |
| ! | GTCACTTTAGTCCCTGAACG+AGG | + | chr3_2:76334539-76334558 | None:intergenic | 50.0% |
| AGCGGAAATGGGAGAGTAAG+AGG | - | chr3_2:76336384-76336403 | Msa0425900:intron | 50.0% | |
| !! | GAGGGACCCTCATTTTTGAG+TGG | - | chr3_2:76336497-76336516 | Msa0425900:intron | 50.0% |
| TGCATTTCACCTACCGCCAA+TGG | - | chr3_2:76336545-76336564 | Msa0425900:intron | 50.0% | |
| ! | TAGTGTCGTGTTGATCGACG+AGG | - | chr3_2:76336943-76336962 | Msa0425900:intron | 50.0% |
| ! | AGTGTCGTGTTGATCGACGA+GGG | - | chr3_2:76336944-76336963 | Msa0425900:intron | 50.0% |
| TGAATGGAATGCCCCCATCA+AGG | + | chr3_2:76337946-76337965 | None:intergenic | 50.0% | |
| !! | TGGGGGCATTCCATTCAACA+AGG | - | chr3_2:76337949-76337968 | Msa0425900:intron | 50.0% |
| ! | GTTGATGTAGGTGGTGGTAC+TGG | - | chr3_2:76338115-76338134 | Msa0425900:intron | 50.0% |
| GTAGGAGTTGAGCATGTTGG+TGG | - | chr3_2:76338350-76338369 | Msa0425900:intron | 50.0% | |
| TTTGTGGCCAGGCTTGAATC+TGG | + | chr3_2:76339039-76339058 | None:intergenic | 50.0% | |
| GATTCAAGCCTGGCCACAAA+AGG | - | chr3_2:76339039-76339058 | Msa0425900:CDS | 50.0% | |
| TGTGTTCTCTCTTTCCCACC+TGG | + | chr3_2:76339102-76339121 | None:intergenic | 50.0% | |
| ACCTTGGAATCCAGCACCTT+TGG | + | chr3_2:76339145-76339164 | None:intergenic | 50.0% | |
| GGACCGAATGTTGCGTCTCT+TGG | - | chr3_2:76333899-76333918 | Msa0425900:CDS | 55.0% | |
| CCAACTGAGATAAGCTCGCG+AGG | + | chr3_2:76335695-76335714 | None:intergenic | 55.0% | |
| CCTCGCGAGCTTATCTCAGT+TGG | - | chr3_2:76335692-76335711 | Msa0425900:intron | 55.0% | |
| GTTCACACTCCATTGGCGGT+AGG | + | chr3_2:76336557-76336576 | None:intergenic | 55.0% | |
| ! | TCGTGTTGATCGACGAGGGT+TGG | - | chr3_2:76336948-76336967 | Msa0425900:intron | 55.0% |
| ! | CGTGTTGATCGACGAGGGTT+GGG | - | chr3_2:76336949-76336968 | Msa0425900:intron | 55.0% |
| AAGGTCCGGGGTTTAAACCC+CGG | - | chr3_2:76337177-76337196 | Msa0425900:intron | 55.0% | |
| GGCAGAATGCATACTTCCGG+TGG | - | chr3_2:76339011-76339030 | Msa0425900:CDS | 55.0% | |
| ! | AGGCTTGAATCTGGAGCCAC+CGG | + | chr3_2:76339030-76339049 | None:intergenic | 55.0% |
| AAGCCTGGCCACAAAAGGTG+TGG | - | chr3_2:76339044-76339063 | Msa0425900:CDS | 55.0% | |
| ! | GAACCACACCTTTTGTGGCC+AGG | + | chr3_2:76339050-76339069 | None:intergenic | 55.0% |
| ! | GAGGATCTTGCCAAAGGTGC+TGG | - | chr3_2:76339132-76339151 | Msa0425900:CDS | 55.0% |
| !! | GCCAAAGGTGCTGGATTCCA+AGG | - | chr3_2:76339141-76339160 | Msa0425900:CDS | 55.0% |
| GGTGACCGGGGTTTAAACCC+CGG | + | chr3_2:76337185-76337204 | None:intergenic | 60.0% | |
| GGTGGCTCCAGATTCAAGCC+TGG | - | chr3_2:76339029-76339048 | Msa0425900:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 76333543 | 76339480 | 76333543 | ID=Msa0425900;Name=Msa0425900 |
| chr3_2 | mRNA | 76333543 | 76339480 | 76333543 | ID=Msa0425900-mRNA-1;Parent=Msa0425900;Name=Msa0425900-mRNA-1;_AED=0.03;_eAED=0.03;_QI=126|1|1|1|1|1|4|256|365 |
| chr3_2 | exon | 76333543 | 76334101 | 76333543 | ID=Msa0425900-mRNA-1:exon:19686;Parent=Msa0425900-mRNA-1 |
| chr3_2 | exon | 76334605 | 76334669 | 76334605 | ID=Msa0425900-mRNA-1:exon:19685;Parent=Msa0425900-mRNA-1 |
| chr3_2 | exon | 76334791 | 76335101 | 76334791 | ID=Msa0425900-mRNA-1:exon:19684;Parent=Msa0425900-mRNA-1 |
| chr3_2 | exon | 76338936 | 76339480 | 76338936 | ID=Msa0425900-mRNA-1:exon:19683;Parent=Msa0425900-mRNA-1 |
| chr3_2 | five_prime_UTR | 76339355 | 76339480 | 76339355 | ID=Msa0425900-mRNA-1:five_prime_utr;Parent=Msa0425900-mRNA-1 |
| chr3_2 | CDS | 76338936 | 76339354 | 76338936 | ID=Msa0425900-mRNA-1:cds;Parent=Msa0425900-mRNA-1 |
| chr3_2 | CDS | 76334791 | 76335101 | 76334791 | ID=Msa0425900-mRNA-1:cds;Parent=Msa0425900-mRNA-1 |
| chr3_2 | CDS | 76334605 | 76334669 | 76334605 | ID=Msa0425900-mRNA-1:cds;Parent=Msa0425900-mRNA-1 |
| chr3_2 | CDS | 76333799 | 76334101 | 76333799 | ID=Msa0425900-mRNA-1:cds;Parent=Msa0425900-mRNA-1 |
| chr3_2 | three_prime_UTR | 76333543 | 76333798 | 76333543 | ID=Msa0425900-mRNA-1:three_prime_utr;Parent=Msa0425900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
