AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0168630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0168630 MtrunA17_Chr1g0185181 98.194 886 16 0 1 886 1 886 0.0 1800
Msa0168630 MtrunA17_Chr4g0005681 50.758 857 399 4 46 880 88 943 0.0 820
Msa0168630 MtrunA17_Chr3g0105811 47.300 852 423 6 51 881 74 920 0.0 765
Msa0168630 MtrunA17_Chr7g0243131 56.058 685 300 1 196 880 1 684 0.0 743
Msa0168630 MtrunA17_Chr7g0243111 35.345 116 64 3 29 137 62 173 3.45e-14 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0168630 AT4G02680.1 67.942 889 281 3 1 886 1 888 0.0 1205
Msa0168630 AT3G51770.1 51.059 850 399 5 51 886 101 947 0.0 832
Msa0168630 AT3G51770.2 51.059 850 399 5 51 886 109 955 0.0 832
Msa0168630 AT5G58550.1 46.893 853 427 4 51 880 60 909 0.0 742

Find 226 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATATAAATTACAAAATT+TGG 0.054987 1_4:+51464957 None:intergenic
CCGTTTCGTGCAATGTTAAA+TGG 0.125750 1_4:-51468922 Msa0168630:CDS
CAATGTTAAATGGGGATTTC+TGG 0.189618 1_4:-51468912 Msa0168630:CDS
AGAGGATTGTGGTGACAATT+TGG 0.210778 1_4:+51469529 None:intergenic
GGCCATGTTTATTCTGTTAC+TGG 0.212572 1_4:-51468298 Msa0168630:CDS
GGTAAACGTCAAAACGAATA+TGG 0.242747 1_4:-51469102 Msa0168630:CDS
AAGAGTCCATTTGCATTAAA+AGG 0.251932 1_4:-51466564 Msa0168630:CDS
TCCCACTATCTTTCTGTTGT+TGG 0.253404 1_4:+51470235 None:intergenic
CCAACATTTCTTGGTGGTTT+GGG 0.261388 1_4:+51465194 None:intergenic
GCTCGACTTGACTCTATAAA+AGG 0.277111 1_4:-51468271 Msa0168630:CDS
CACAATATAGTGATCTTTCT+TGG 0.280637 1_4:+51468179 None:intergenic
AGAACTTAAGTGCTCTTCTT+TGG 0.282552 1_4:+51469595 None:intergenic
TCCAACATTTCTTGGTGGTT+TGG 0.283235 1_4:+51465193 None:intergenic
AATATCTCCAACAGAAGTTT+TGG 0.284261 1_4:+51468781 None:intergenic
TCTGTTTCTGTTTCAATATC+AGG 0.287273 1_4:-51469274 Msa0168630:CDS
TATGAAGTTCCAACATTTCT+TGG 0.289589 1_4:+51465185 None:intergenic
TTCACGAGAGGATTGTATTT+GGG 0.293023 1_4:-51469179 Msa0168630:CDS
TTGTATATCCCTACATGTAT+AGG 0.294097 1_4:-51468102 Msa0168630:CDS
CAATGGCTTCCAGTTCCTTA+TGG 0.297587 1_4:+51465344 None:intergenic
AAATCAAACCTTTACAAATC+AGG 0.298717 1_4:+51469702 None:intergenic
GTTCACGAGAGGATTGTATT+TGG 0.315389 1_4:-51469180 Msa0168630:CDS
ACTGTTGGCCTTTCATCGTT+TGG 0.316810 1_4:-51468389 Msa0168630:CDS
GAATATAAATTACAAAATTT+GGG 0.324163 1_4:+51464958 None:intergenic
CGGCCAATGCATAGGCCTTT+AGG 0.325658 1_4:+51466524 None:intergenic
CTCACTGCTTGAGCGATAAT+CGG 0.328486 1_4:-51468588 Msa0168630:CDS
AATAGTGGCTGCAACTTCTA+TGG 0.330747 1_4:-51470269 Msa0168630:five_prime_UTR
GAGTTCGATAGCATCTTCTT+TGG 0.333660 1_4:+51468684 None:intergenic
CTGTTGGCCTTTCATCGTTT+GGG 0.333917 1_4:-51468388 Msa0168630:CDS
TTTATATTCTTGCTATCCTT+TGG 0.335070 1_4:-51464944 Msa0168630:three_prime_UTR
TTTGAGAGCGCTGTAAATAA+TGG 0.335421 1_4:-51468319 Msa0168630:CDS
GGGTTGTTGTTGTGGAGATC+TGG 0.339634 1_4:-51469670 Msa0168630:five_prime_UTR
CCACCATACTCGAGCCCATC+AGG 0.343844 1_4:-51465682 Msa0168630:CDS
AACATGACTCAAGTTCTTCA+TGG 0.345744 1_4:+51469316 None:intergenic
GACCCTGATGGGCTCGAGTA+TGG 0.351890 1_4:+51465679 None:intergenic
GAGGATTGTGGTGACAATTT+GGG 0.355746 1_4:+51469530 None:intergenic
AGTGAGGAAGATCACGTAAA+AGG 0.359579 1_4:+51468605 None:intergenic
AAACACTTCCAAGATTGTTC+AGG 0.361478 1_4:+51465763 None:intergenic
TCAAATGGGTACGAAAGTTT+TGG 0.371428 1_4:+51470060 None:intergenic
CGTTTCGTGCAATGTTAAAT+GGG 0.372747 1_4:-51468921 Msa0168630:CDS
TACCAGGCCCTGAACAATCT+TGG 0.373501 1_4:-51465771 Msa0168630:intron
TGAAAACAATATATCTCCTT+CGG 0.376028 1_4:-51468860 Msa0168630:CDS
TGTATATCCCTACATGTATA+GGG 0.376269 1_4:-51468101 Msa0168630:CDS
TCTATCACAACAATACTTGT+TGG 0.379743 1_4:+51468750 None:intergenic
TAAACTTTCGTTAGAATGCT+TGG 0.380126 1_4:-51468011 Msa0168630:CDS
TATGAGAAGAGATCCGAGTA+TGG 0.389290 1_4:-51465564 Msa0168630:CDS
GCATTGGCCGACTCTGGTCT+TGG 0.390640 1_4:-51466511 Msa0168630:CDS
AATGTTAAATGGGGATTTCT+GGG 0.397944 1_4:-51468911 Msa0168630:CDS
GGTTGTTGTTGTGGAGATCT+GGG 0.406845 1_4:-51469669 Msa0168630:five_prime_UTR
TAAGCAGCAGTTGGCAGTTA+TGG 0.413136 1_4:-51468539 Msa0168630:CDS
ATCTTCTTTGGAAGTAACTA+AGG 0.415086 1_4:+51468696 None:intergenic
CCATTTAACATTGCACGAAA+CGG 0.418136 1_4:+51468922 None:intergenic
CCATTGAAGAAAGTCCTCAT+AGG 0.422614 1_4:+51469626 None:intergenic
TTTGAGGTTGAGGGTAATAG+TGG 0.424534 1_4:-51469764 Msa0168630:five_prime_UTR
GGATAAGCCACATATATATC+TGG 0.426164 1_4:+51464905 None:intergenic
AATAGTGGAATGTGACTAGT+AGG 0.428643 1_4:-51469749 Msa0168630:five_prime_UTR
TTTGACGACGGCAGATTGTT+GGG 0.432677 1_4:-51467834 Msa0168630:CDS
AAGTTGCAGCCACTATTTGT+TGG 0.433023 1_4:+51470275 None:intergenic
GGGCATTCCTCTCTTTAGAA+AGG 0.433690 1_4:+51464978 None:intergenic
CAAGTTCAGTTGCTTTCTCA+AGG 0.436990 1_4:+51468134 None:intergenic
TCTTTCTGTTGTTGGTGTGT+TGG 0.439058 1_4:+51470243 None:intergenic
TGATAATCTGCGCAAAGGTC+AGG 0.439110 1_4:-51466431 Msa0168630:intron
TCCGCGTTATAGAATGTTTG+AGG 0.440849 1_4:-51467909 Msa0168630:CDS
TGTGTTACCGTTCTTTAAAC+CGG 0.443507 1_4:-51469367 Msa0168630:CDS
GTTCTCTTAATCCACAATCA+TGG 0.443606 1_4:-51469577 Msa0168630:CDS
GAAAACAATATATCTCCTTC+GGG 0.443685 1_4:-51468859 Msa0168630:CDS
CACCAACAACAGAAAGATAG+TGG 0.445917 1_4:-51470237 Msa0168630:five_prime_UTR
GTGCACTGGCTGAAATTAAT+CGG 0.446185 1_4:-51468045 Msa0168630:CDS
ATCCATCCGAGTCGAGTGAC+AGG 0.451951 1_4:+51468205 None:intergenic
GACAGTCATTGCTTCTCCTC+AGG 0.455426 1_4:-51467709 Msa0168630:intron
AAGGGCTTTAATATAGCAAT+CGG 0.456191 1_4:+51465710 None:intergenic
CATTCATCAAAACACTCTCC+TGG 0.459352 1_4:+51469031 None:intergenic
TGCGGAGTTTACAGTTAGCT+TGG 0.466730 1_4:-51466678 Msa0168630:CDS
ATTTGACGACGGCAGATTGT+TGG 0.467560 1_4:-51467835 Msa0168630:CDS
TCGCTCTCCGCCATGCTTCG+CGG 0.467797 1_4:+51469208 None:intergenic
GATGGACAACCATAAGGAAC+TGG 0.469162 1_4:-51465353 Msa0168630:CDS
GCCTATGCATTGGCCGACTC+TGG 0.469181 1_4:-51466517 Msa0168630:CDS
AATCTCTCCAAAACTTCTGT+TGG 0.471626 1_4:-51468788 Msa0168630:CDS
TTGTGTCTGAACTAGAGTTA+AGG 0.471631 1_4:+51468464 None:intergenic
TGACAAGGCTGCTGCTTACA+AGG 0.472593 1_4:-51465631 Msa0168630:CDS
AACACTTCCAAGATTGTTCA+GGG 0.476172 1_4:+51465764 None:intergenic
CTAGTTGCTGATTTGTTGAC+TGG 0.476352 1_4:-51469123 Msa0168630:CDS
ATAAGTTATTTCACTATGAC+TGG 0.481936 1_4:-51468826 Msa0168630:CDS
TAGAAAGGAAAATGATATCA+TGG 0.482871 1_4:+51464993 None:intergenic
CTACAGAAAGAAAGAAATGA+AGG 0.485136 1_4:+51470116 None:intergenic
GTATGATACTGGTCATTATG+AGG 0.485156 1_4:-51466605 Msa0168630:CDS
AGAAGATGCTATCGAACTCA+TGG 0.485643 1_4:-51468680 Msa0168630:CDS
TAATATAGCAATCGGCTGCT+TGG 0.486527 1_4:+51465718 None:intergenic
TTGTTGTGATAGATTAAAAG+AGG 0.488749 1_4:-51468740 Msa0168630:CDS
TCTTTGACCCTGATTTGTAA+AGG 0.491027 1_4:-51469710 Msa0168630:five_prime_UTR
CCGCGTTATAGAATGTTTGA+GGG 0.494477 1_4:-51467908 Msa0168630:CDS
TCACTGCTTGAGCGATAATC+GGG 0.495907 1_4:-51468587 Msa0168630:CDS
ATGGTTGAAATATGAGAAGC+AGG 0.502476 1_4:-51469154 Msa0168630:CDS
CTTGAATCTGATGCGGCAAA+AGG 0.502861 1_4:-51467746 Msa0168630:CDS
CCCAAACCACCAAGAAATGT+TGG 0.503161 1_4:-51465194 Msa0168630:CDS
AAAACTTCGACATAATCAAC+CGG 0.504243 1_4:+51469348 None:intergenic
ATATGCAGGAAAGGGTCAAA+TGG 0.505300 1_4:+51470045 None:intergenic
ATGAAGGGTTTGAAGATGAA+AGG 0.513472 1_4:+51470132 None:intergenic
AATCAAACCTTTACAAATCA+GGG 0.513574 1_4:+51469703 None:intergenic
GCGGTAATAAAATACATGTA+TGG 0.515136 1_4:+51464875 None:intergenic
GCTGAAATTAATCGGATACT+TGG 0.515937 1_4:-51468037 Msa0168630:CDS
AGAGAATTCTCAAGGTGCAC+TGG 0.519053 1_4:-51468059 Msa0168630:CDS
ATCTTACATTGATGCAGAAG+AGG 0.519598 1_4:+51469511 None:intergenic
TTGGTGTATTATGCCCTATG+AGG 0.520640 1_4:-51469640 Msa0168630:exon
GTAAACGTCAAAACGAATAT+GGG 0.522451 1_4:-51469101 Msa0168630:CDS
CCTGCTGCTCGATATCTGTA+AGG 0.523465 1_4:+51465477 None:intergenic
CCTATGAGGACTTTCTTCAA+TGG 0.524229 1_4:-51469626 Msa0168630:CDS
TTTCCTAAAGGCCTATGCAT+TGG 0.524357 1_4:-51466527 Msa0168630:CDS
AGAGGATTGTATTTGGGGCA+TGG 0.524901 1_4:-51469173 Msa0168630:CDS
TCACGAGAGGATTGTATTTG+GGG 0.525061 1_4:-51469178 Msa0168630:CDS
AAATACATGTATGGTTGTTG+AGG 0.526165 1_4:+51464884 None:intergenic
ATTTCCCCTGTCACTCGACT+CGG 0.526456 1_4:-51468211 Msa0168630:CDS
AATAAGGAATATGCAGGAAA+GGG 0.526953 1_4:+51470037 None:intergenic
GGTCCACATCCAACAAATAG+TGG 0.528512 1_4:-51470284 None:intergenic
ATGAGAAGAGATCCGAGTAT+GGG 0.528955 1_4:-51465563 Msa0168630:CDS
CCTTACAGATATCGAGCAGC+AGG 0.529501 1_4:-51465477 Msa0168630:intron
AGATGCAGCCCTATACATGT+AGG 0.534074 1_4:+51468093 None:intergenic
GAAGTTCCAACATTTCTTGG+TGG 0.535323 1_4:+51465188 None:intergenic
GAATAATAGGGTTGTTGTTG+TGG 0.535996 1_4:-51469678 Msa0168630:five_prime_UTR
AAATAAGGAATATGCAGGAA+AGG 0.537352 1_4:+51470036 None:intergenic
TATGCAGGAAAGGGTCAAAT+GGG 0.540408 1_4:+51470046 None:intergenic
GCATGAAAGACTTGTATATG+AGG 0.540587 1_4:-51466638 Msa0168630:CDS
GATACTGGTCATTATGAGGA+AGG 0.545226 1_4:-51466601 Msa0168630:CDS
ACTTGAGTCATGTTCTTCAC+AGG 0.545464 1_4:-51469307 Msa0168630:CDS
TCATGGCTTCAAGTTGAAAG+AGG 0.546316 1_4:-51469560 Msa0168630:CDS
CGCAGCGTTCCATGAACACA+AGG 0.546764 1_4:-51465266 Msa0168630:CDS
AAACTCCGCATAGCTGCCTC+AGG 0.547345 1_4:+51466691 None:intergenic
TGACTCTATAAAAGGTGAGA+AGG 0.549853 1_4:-51468263 Msa0168630:CDS
AAAGAAGCCTCCGCGAAGCA+TGG 0.550163 1_4:-51469218 Msa0168630:CDS
TTATAGTGAATCTCTAATCA+AGG 0.550486 1_4:-51469403 Msa0168630:intron
GCATCAAATAAGGAATATGC+AGG 0.550988 1_4:+51470031 None:intergenic
ACGGTAACACAGGTGGCTGT+TGG 0.551175 1_4:+51469379 None:intergenic
GCTGATGATTGTACAAATGC+TGG 0.551964 1_4:+51465104 None:intergenic
CGTTAGAATGCTTGGAACTG+CGG 0.552505 1_4:-51468003 Msa0168630:CDS
AACACGCGCAAGACCCTGAT+GGG 0.553316 1_4:+51465668 None:intergenic
ATGTAGGGATATACAAGAGT+GGG 0.553780 1_4:+51468109 None:intergenic
TTGGCAGTTATGGTAGGTCA+AGG 0.553971 1_4:-51468529 Msa0168630:CDS
TATCTTATCTTGAAAAGAAG+AGG 0.558175 1_4:+51464831 None:intergenic
TCATGCTAATAAGCAGCAGT+TGG 0.558599 1_4:-51468548 Msa0168630:CDS
TCAACTTGAAGCCATGATTG+TGG 0.559627 1_4:+51469566 None:intergenic
CAAACTTGACTCATGGTTCG+TGG 0.559712 1_4:+51465149 None:intergenic
ATATGAGACTCCACATCTAT+CGG 0.562574 1_4:+51469078 None:intergenic
TACACATCCCAAACGATGAA+AGG 0.563344 1_4:+51468381 None:intergenic
CACTTCTCGAAGATGCCTTG+AGG 0.563644 1_4:-51466462 Msa0168630:CDS
CATTGAAGAAAGTCCTCATA+GGG 0.564706 1_4:+51469627 None:intergenic
AGTCAAGTTTGCGAGCTATG+AGG 0.569226 1_4:-51465137 Msa0168630:three_prime_UTR
TGATGTCAAGGTAAGTTCCC+AGG 0.569517 1_4:-51469049 Msa0168630:CDS
ATTCATCAAAACACTCTCCT+GGG 0.571948 1_4:+51469032 None:intergenic
GACAGTCTCTTAGCGCACTC+AGG 0.573098 1_4:+51465236 None:intergenic
TCATATTCCTTCTGATGTCA+AGG 0.575470 1_4:-51469061 Msa0168630:CDS
GAACTTACCTTGACATCAGA+AGG 0.576119 1_4:+51469054 None:intergenic
ACGCTGCGCGTAGATGTAAG+AGG 0.579089 1_4:+51465281 None:intergenic
GAGTTCACGATCCCCATACT+CGG 0.579548 1_4:+51465551 None:intergenic
CTTGAGCGATAATCGGGTGG+TGG 0.580545 1_4:-51468581 Msa0168630:CDS
CGAATATGGGCCGATAGATG+TGG 0.582159 1_4:-51469088 Msa0168630:CDS
CTGTAAGGATACACACGAAG+TGG 0.582972 1_4:+51465492 None:intergenic
ATACTGGTCATTATGAGGAA+GGG 0.584670 1_4:-51466600 Msa0168630:CDS
ATTGTGATGATGATTTGAGA+TGG 0.585528 1_4:-51468162 Msa0168630:CDS
CATGGCTTCAAGTTGAAAGA+GGG 0.586439 1_4:-51469559 Msa0168630:CDS
ACCAGAGTCGGCCAATGCAT+AGG 0.589399 1_4:+51466516 None:intergenic
ATTACAACAGAGTATACAGA+TGG 0.590218 1_4:+51465025 None:intergenic
CAGCAGTTGGCAGTTATGGT+AGG 0.590509 1_4:-51468535 Msa0168630:CDS
CCCCTGTCACTCGACTCGGA+TGG 0.590694 1_4:-51468207 Msa0168630:CDS
GATGCAGCCCTATACATGTA+GGG 0.591178 1_4:+51468094 None:intergenic
TGGTTGAAATATGAGAAGCA+GGG 0.596245 1_4:-51469153 Msa0168630:CDS
CCTGATGGGCTCGAGTATGG+TGG 0.596465 1_4:+51465682 None:intergenic
AAGCAACAAGCAGAGACTGT+TGG 0.598461 1_4:-51468404 Msa0168630:CDS
ATTATCAGAAGGACACCTCA+AGG 0.599241 1_4:+51466447 None:intergenic
ATGAGGACAGAGAATTCTCA+AGG 0.601625 1_4:-51468067 Msa0168630:CDS
TGGGATGTGTAAGACTCTTG+CGG 0.602911 1_4:-51468369 Msa0168630:CDS
TAGCTCGCAAACTTGACTCA+TGG 0.603131 1_4:+51465142 None:intergenic
AGCTCTAGATAGCTCAGCAA+TGG 0.603255 1_4:+51465327 None:intergenic
TTTAACATTGCACGAAACGG+CGG 0.605696 1_4:+51468925 None:intergenic
AAGAATACCAGATATATATG+TGG 0.606691 1_4:-51464912 Msa0168630:three_prime_UTR
ATAGGGCTGCATCTTTAATG+AGG 0.610370 1_4:-51468084 Msa0168630:CDS
AAAGACTTGTATATGAGGGG+TGG 0.612054 1_4:-51466633 Msa0168630:CDS
TCCATCCGAGTCGAGTGACA+GGG 0.612152 1_4:+51468206 None:intergenic
GAACACGCGCAAGACCCTGA+TGG 0.612717 1_4:+51465667 None:intergenic
CTGTCGTGCTGCACTCTCAG+TGG 0.615087 1_4:-51465218 Msa0168630:CDS
TAATCAACCGGTTTAAAGAA+CGG 0.616970 1_4:+51469360 None:intergenic
GGGCACAATTATATGACTGT+TGG 0.617088 1_4:-51467814 Msa0168630:CDS
TATTGAACCAAGACCAGAGT+CGG 0.619309 1_4:+51466504 None:intergenic
CTCTCCGCCATGCTTCGCGG+AGG 0.620798 1_4:+51469211 None:intergenic
TGAGAAGAGATCCGAGTATG+GGG 0.621478 1_4:-51465562 Msa0168630:CDS
AAGGGTTTGAAGATGAAAGG+AGG 0.622150 1_4:+51470135 None:intergenic
GTTTCGTGCAATGTTAAATG+GGG 0.622406 1_4:-51468920 Msa0168630:CDS
CACCATACTCGAGCCCATCA+GGG 0.625478 1_4:-51465681 Msa0168630:CDS
CTTGTAAACAAGAAGCTGCA+AGG 0.625964 1_4:+51468629 None:intergenic
TACAGAAAGAAAGAAATGAA+GGG 0.626185 1_4:+51470117 None:intergenic
CATGTAGGGATATACAAGAG+TGG 0.626406 1_4:+51468108 None:intergenic
TTTCTGGGAATCGTCGTCTG+AGG 0.626743 1_4:-51468896 Msa0168630:CDS
CAGCGTTCCATGAACACAAG+GGG 0.629074 1_4:-51465264 Msa0168630:CDS
CGCGTTATAGAATGTTTGAG+GGG 0.629299 1_4:-51467907 Msa0168630:CDS
TATTCTTAACACATCTCCAA+AGG 0.630781 1_4:+51464928 None:intergenic
CACAAAGGCAGATCTTGAGA+TGG 0.631605 1_4:-51465529 Msa0168630:CDS
CATGAAAGACTTGTATATGA+GGG 0.634711 1_4:-51466637 Msa0168630:CDS
AATGACCAAACTTATCGAGA+AGG 0.635600 1_4:-51465607 Msa0168630:CDS
TCAGATGCTTGAATCTGATG+CGG 0.636780 1_4:-51467753 Msa0168630:CDS
GGTTGAAATATGAGAAGCAG+GGG 0.637522 1_4:-51469152 Msa0168630:CDS
CTGCTTGAGCGATAATCGGG+TGG 0.640329 1_4:-51468584 Msa0168630:CDS
GAGCGAGTTCTGTTCACGAG+AGG 0.642774 1_4:-51469191 Msa0168630:CDS
TACACAAATATGTCTAGATG+CGG 0.644279 1_4:+51464856 None:intergenic
GGTTTAAAGAACGGTAACAC+AGG 0.645027 1_4:+51469369 None:intergenic
CCTTTGCGCAGATTATCAGA+AGG 0.649315 1_4:+51466436 None:intergenic
CCCTCAAACATTCTATAACG+CGG 0.653255 1_4:+51467908 None:intergenic
ATTTAGGCTAAACTGTCCTG+AGG 0.653337 1_4:-51466707 Msa0168630:intron
ACCAACAACAGAAAGATAGT+GGG 0.654790 1_4:-51470236 Msa0168630:five_prime_UTR
CCTTCTGATAATCTGCGCAA+AGG 0.655235 1_4:-51466436 Msa0168630:CDS
AACCAGTAACAGAATAAACA+TGG 0.659934 1_4:+51468296 None:intergenic
ATTGATGCAGAAGAGGATTG+TGG 0.661016 1_4:+51469518 None:intergenic
AATCGCTTGAACATCACGAA+GGG 0.661375 1_4:+51467943 None:intergenic
CTTATCGCTCTCATACCCGA+AGG 0.668843 1_4:+51468844 None:intergenic
GAAGCCTCCGCGAAGCATGG+CGG 0.670703 1_4:-51469215 Msa0168630:CDS
ATGAAAGACTTGTATATGAG+GGG 0.671236 1_4:-51466636 Msa0168630:CDS
CATGCTCAAGCACAAGAGTG+CGG 0.678233 1_4:+51467864 None:intergenic
TGGGGATCGTGAACTCACAA+AGG 0.679605 1_4:-51465544 Msa0168630:CDS
GCAGCGTTCCATGAACACAA+GGG 0.680635 1_4:-51465265 Msa0168630:CDS
CCATCCGAGTCGAGTGACAG+GGG 0.681722 1_4:+51468207 None:intergenic
GCATCAGTTTAACATCACCA+AGG 0.683805 1_4:+51469241 None:intergenic
TTAAAGAACGGTAACACAGG+TGG 0.686583 1_4:+51469372 None:intergenic
CGATTATCGCTCAAGCAGTG+AGG 0.692445 1_4:+51468589 None:intergenic
GAATCGCTTGAACATCACGA+AGG 0.693374 1_4:+51467942 None:intergenic
GCATGTTGAACATTTGACGA+CGG 0.694893 1_4:-51467846 Msa0168630:CDS
TGTAGGGATATACAAGAGTG+GGG 0.708232 1_4:+51468110 None:intergenic
AGCGTTCCATGAACACAAGG+GGG 0.730043 1_4:-51465263 Msa0168630:CDS
ACTGTCCTGAGGCAGCTATG+CGG 0.731322 1_4:-51466696 Msa0168630:CDS
GTTGAAATATGAGAAGCAGG+GGG 0.744146 1_4:-51469151 Msa0168630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATATAAATTACAAAATTT+GGG + chr1_4:51470135-51470154 None:intergenic 10.0%
!! AGAATATAAATTACAAAATT+TGG + chr1_4:51470136-51470155 None:intergenic 10.0%
!!! TTTTTATTTTTTTACTTCTG+TGG - chr1_4:51465176-51465195 Msa0168630:CDS 15.0%
!!! AACAAAACTTTTTATCATTT+TGG + chr1_4:51465276-51465295 None:intergenic 15.0%
!!! TTAGATTATTTTTAAGTTTG+AGG - chr1_4:51465310-51465329 Msa0168630:CDS 15.0%
!!! CAATATGTTGTTTTTATAAT+TGG - chr1_4:51466096-51466115 Msa0168630:intron 15.0%
!! CATATATTTAATCATATAGT+AGG - chr1_4:51467520-51467539 Msa0168630:intron 15.0%
!!! ACTTTAATTTAGGAAAAATA+GGG + chr1_4:51467610-51467629 None:intergenic 15.0%
!!! AACTTTAATTTAGGAAAAAT+AGG + chr1_4:51467611-51467630 None:intergenic 15.0%
!!! CATTTTTAAAATTGAGTTTT+GGG - chr1_4:51467641-51467660 Msa0168630:intron 15.0%
!!! TGTAAAAAGAAATGATTTTA+CGG - chr1_4:51468770-51468789 Msa0168630:CDS 15.0%
!!! ATTGTTTTTGTTTTCTCATA+GGG - chr1_4:51465236-51465255 Msa0168630:CDS 20.0%
!!! AAGTTTTGTTTTTTCTTTCT+TGG - chr1_4:51465286-51465305 Msa0168630:CDS 20.0%
!!! AAGGTTTGATTTTGAATAAT+AGG - chr1_4:51465399-51465418 Msa0168630:intron 20.0%
!!! AGGTTTGATTTTGAATAATA+GGG - chr1_4:51465400-51465419 Msa0168630:intron 20.0%
!!! TTTCAATATCAGGTTTTTAA+AGG - chr1_4:51465826-51465845 Msa0168630:intron 20.0%
!! AAGGCTGATAAATAAAAATA+AGG - chr1_4:51467564-51467583 Msa0168630:intron 20.0%
!!! TTTAATTTAGGAAAAATAGG+GGG + chr1_4:51467608-51467627 None:intergenic 20.0%
!!! CTTTAATTTAGGAAAAATAG+GGG + chr1_4:51467609-51467628 None:intergenic 20.0%
!!! AACTCAATTTTAAAAATGGA+GGG + chr1_4:51467639-51467658 None:intergenic 20.0%
!!! AAACTCAATTTTAAAAATGG+AGG + chr1_4:51467640-51467659 None:intergenic 20.0%
!!! CCAAAACTCAATTTTAAAAA+TGG + chr1_4:51467643-51467662 None:intergenic 20.0%
!!! CCATTTTTAAAATTGAGTTT+TGG - chr1_4:51467640-51467659 Msa0168630:intron 20.0%
!! AGCAAAAATGACTAAAAATT+TGG - chr1_4:51467828-51467847 Msa0168630:CDS 20.0%
!! AAAAATGACTAAAAATTTGG+CGG - chr1_4:51467831-51467850 Msa0168630:CDS 20.0%
!!! ACTTTAATTTAAGCCAAATA+TGG - chr1_4:51467923-51467942 Msa0168630:CDS 20.0%
!!! CTTTAATTTAAGCCAAATAT+GGG - chr1_4:51467924-51467943 Msa0168630:CDS 20.0%
!!! TTTAATTTAAGCCAAATATG+GGG - chr1_4:51467925-51467944 Msa0168630:CDS 20.0%
!! ATCTGACATTTATATGATTT+AGG - chr1_4:51468367-51468386 Msa0168630:CDS 20.0%
!!! AGAACTATTTTCATTAGTTT+TGG + chr1_4:51469016-51469035 None:intergenic 20.0%
!! GTTAATACTTATTGTATCAA+AGG + chr1_4:51469264-51469283 None:intergenic 20.0%
!!! AAGTATTAACTTAAGAGTTT+TGG - chr1_4:51469274-51469293 Msa0168630:CDS 20.0%
!!! TCATTTTCTAAAAAATGACA+AGG - chr1_4:51469444-51469463 Msa0168630:intron 20.0%
!! TACTTGACAATATGTATATA+TGG - chr1_4:51469695-51469714 Msa0168630:five_prime_UTR 20.0%
!!! TTGAACTTTGTTTTTCTGTT+TGG + chr1_4:51464920-51464939 None:intergenic 25.0%
! TACAGAAAGAAAGAAATGAA+GGG + chr1_4:51464976-51464995 None:intergenic 25.0%
!!! GTTTTGTTTAGCATCAAATA+AGG + chr1_4:51465072-51465091 None:intergenic 25.0%
!!! GATTGTTTTTGTTTTCTCAT+AGG - chr1_4:51465235-51465254 Msa0168630:CDS 25.0%
!!! TATTTTTAAGTTTGAGGTTG+AGG - chr1_4:51465316-51465335 Msa0168630:CDS 25.0%
!!! ATTTTTAAGTTTGAGGTTGA+GGG - chr1_4:51465317-51465336 Msa0168630:CDS 25.0%
! AATCAAACCTTTACAAATCA+GGG + chr1_4:51465390-51465409 None:intergenic 25.0%
! AAATCAAACCTTTACAAATC+AGG + chr1_4:51465391-51465410 None:intergenic 25.0%
! TTATAGTGAATCTCTAATCA+AGG - chr1_4:51465687-51465706 Msa0168630:CDS 25.0%
! TGAAAACAATATATCTCCTT+CGG - chr1_4:51466230-51466249 Msa0168630:intron 25.0%
!! ATAAGTTATTTCACTATGAC+TGG - chr1_4:51466264-51466283 Msa0168630:intron 25.0%
! TTGTTGTGATAGATTAAAAG+AGG - chr1_4:51466350-51466369 Msa0168630:intron 25.0%
!! AGGGACTAAAACTTTAATTT+AGG + chr1_4:51467620-51467639 None:intergenic 25.0%
!! CAAAGGAAAATTTTATGATG+TGG + chr1_4:51468232-51468251 None:intergenic 25.0%
!! AAAAGACCTTTTAATGCAAA+TGG + chr1_4:51468535-51468554 None:intergenic 25.0%
! ATTAGAGAAATATTTCCAGA+AGG + chr1_4:51468707-51468726 None:intergenic 25.0%
! GGAAATTTATTAGCAGTTAT+TGG - chr1_4:51468791-51468810 Msa0168630:CDS 25.0%
! ATGTTATCTTACCACAAAAT+TGG + chr1_4:51468857-51468876 None:intergenic 25.0%
!!! TTAACTTGCTAATAAGAAGA+TGG - chr1_4:51468926-51468945 Msa0168630:CDS 25.0%
!!! TAACTTGCTAATAAGAAGAT+GGG - chr1_4:51468927-51468946 Msa0168630:CDS 25.0%
! ACAAAAGCTAACAAGTTTAT+TGG + chr1_4:51469193-51469212 None:intergenic 25.0%
!! TTTGTTCCATTTAATTTACC+AGG - chr1_4:51469303-51469322 Msa0168630:CDS 25.0%
! TAGAAAGGAAAATGATATCA+TGG + chr1_4:51470100-51470119 None:intergenic 25.0%
!! TTTATATTCTTGCTATCCTT+TGG - chr1_4:51470146-51470165 Msa0168630:five_prime_UTR 25.0%
! AAGAATACCAGATATATATG+TGG - chr1_4:51470178-51470197 Msa0168630:five_prime_UTR 25.0%
! TATCTTATCTTGAAAAGAAG+AGG + chr1_4:51470262-51470281 None:intergenic 25.0%
!! TGTTTTTCTGTTTGGTGAAA+GGG + chr1_4:51464912-51464931 None:intergenic 30.0%
!! TTGTTTTTCTGTTTGGTGAA+AGG + chr1_4:51464913-51464932 None:intergenic 30.0%
CTACAGAAAGAAAGAAATGA+AGG + chr1_4:51464977-51464996 None:intergenic 30.0%
AATAAGGAATATGCAGGAAA+GGG + chr1_4:51465056-51465075 None:intergenic 30.0%
AAATAAGGAATATGCAGGAA+AGG + chr1_4:51465057-51465076 None:intergenic 30.0%
!!! TTTTTGTTTTCTCATAGGGT+AGG - chr1_4:51465240-51465259 Msa0168630:CDS 30.0%
! TAATCAACCGGTTTAAAGAA+CGG + chr1_4:51465733-51465752 None:intergenic 30.0%
AAAACTTCGACATAATCAAC+CGG + chr1_4:51465745-51465764 None:intergenic 30.0%
!! TCTGTTTCTGTTTCAATATC+AGG - chr1_4:51465816-51465835 Msa0168630:intron 30.0%
GTAAACGTCAAAACGAATAT+GGG - chr1_4:51465989-51466008 Msa0168630:intron 30.0%
! TTTTTATAATTGGCGATGAG+AGG - chr1_4:51466106-51466125 Msa0168630:intron 30.0%
AATGTTAAATGGGGATTTCT+GGG - chr1_4:51466179-51466198 Msa0168630:intron 30.0%
GAAAACAATATATCTCCTTC+GGG - chr1_4:51466231-51466250 Msa0168630:intron 30.0%
! AATATCTCCAACAGAAGTTT+TGG + chr1_4:51466312-51466331 None:intergenic 30.0%
TCTATCACAACAATACTTGT+TGG + chr1_4:51466343-51466362 None:intergenic 30.0%
! ATCTTCTTTGGAAGTAACTA+AGG + chr1_4:51466397-51466416 None:intergenic 30.0%
AACCAGTAACAGAATAAACA+TGG + chr1_4:51466797-51466816 None:intergenic 30.0%
CACAATATAGTGATCTTTCT+TGG + chr1_4:51466914-51466933 None:intergenic 30.0%
! ATTGTGATGATGATTTGAGA+TGG - chr1_4:51466928-51466947 Msa0168630:intron 30.0%
TTGTATATCCCTACATGTAT+AGG - chr1_4:51466988-51467007 Msa0168630:intron 30.0%
TGTATATCCCTACATGTATA+GGG - chr1_4:51466989-51467008 Msa0168630:intron 30.0%
TAAACTTTCGTTAGAATGCT+TGG - chr1_4:51467079-51467098 Msa0168630:intron 30.0%
!!! ACTGCGGTTTTTTATATTTC+TGG - chr1_4:51467103-51467122 Msa0168630:intron 30.0%
!!! TTTTATATTTCTGGCTCTTG+AGG - chr1_4:51467112-51467131 Msa0168630:intron 30.0%
! TCACTCTGTTTCACAATTTT+CGG + chr1_4:51467869-51467888 None:intergenic 30.0%
!!! TATTTCTAAAACCGGGTTTT+TGG + chr1_4:51467892-51467911 None:intergenic 30.0%
!!! AAAAACCCGGTTTTAGAAAT+AGG - chr1_4:51467891-51467910 Msa0168630:CDS 30.0%
!!! AAAACCCGGTTTTAGAAATA+GGG - chr1_4:51467892-51467911 Msa0168630:CDS 30.0%
! ATTGAAACTTTTGTATGCCA+TGG - chr1_4:51468335-51468354 Msa0168630:CDS 30.0%
CATGAAAGACTTGTATATGA+GGG - chr1_4:51468453-51468472 Msa0168630:CDS 30.0%
ATGAAAGACTTGTATATGAG+GGG - chr1_4:51468454-51468473 Msa0168630:CDS 30.0%
AAGAGTCCATTTGCATTAAA+AGG - chr1_4:51468526-51468545 Msa0168630:CDS 30.0%
! TTGCATTAAAAGGTCTTTTG+AGG - chr1_4:51468536-51468555 Msa0168630:CDS 30.0%
!!! TTTTGAGGCATTTTTCCTAA+AGG - chr1_4:51468551-51468570 Msa0168630:CDS 30.0%
! CTCGACATTTTCATTGTTTT+CGG - chr1_4:51469034-51469053 Msa0168630:CDS 30.0%
!!! GCTAGTTTTACTTGTTAACA+AGG + chr1_4:51469099-51469118 None:intergenic 30.0%
!!! CTTGTTAGCTTTTGTATAGT+TGG - chr1_4:51469198-51469217 Msa0168630:CDS 30.0%
! TTTTGTTGATCATGGAAAAC+TGG - chr1_4:51469348-51469367 Msa0168630:CDS 30.0%
! AAGGGCTTTAATATAGCAAT+CGG + chr1_4:51469383-51469402 None:intergenic 30.0%
TATGAAGTTCCAACATTTCT+TGG + chr1_4:51469908-51469927 None:intergenic 30.0%
ATTACAACAGAGTATACAGA+TGG + chr1_4:51470068-51470087 None:intergenic 30.0%
!! TCATTTTCCTTTCTAAAGAG+AGG - chr1_4:51470105-51470124 Msa0168630:five_prime_UTR 30.0%
TATTCTTAACACATCTCCAA+AGG + chr1_4:51470165-51470184 None:intergenic 30.0%
AAATACATGTATGGTTGTTG+AGG + chr1_4:51470209-51470228 None:intergenic 30.0%
GCGGTAATAAAATACATGTA+TGG + chr1_4:51470218-51470237 None:intergenic 30.0%
TACACAAATATGTCTAGATG+CGG + chr1_4:51470237-51470256 None:intergenic 30.0%
ACCAACAACAGAAAGATAGT+GGG - chr1_4:51464854-51464873 Msa0168630:three_prime_UTR 35.0%
ATGAAGGGTTTGAAGATGAA+AGG + chr1_4:51464961-51464980 None:intergenic 35.0%
! TCAAATGGGTACGAAAGTTT+TGG + chr1_4:51465033-51465052 None:intergenic 35.0%
GCATCAAATAAGGAATATGC+AGG + chr1_4:51465062-51465081 None:intergenic 35.0%
! AATAGTGGAATGTGACTAGT+AGG - chr1_4:51465341-51465360 Msa0168630:CDS 35.0%
! TCTTTGACCCTGATTTGTAA+AGG - chr1_4:51465380-51465399 Msa0168630:intron 35.0%
! GAATAATAGGGTTGTTGTTG+TGG - chr1_4:51465412-51465431 Msa0168630:intron 35.0%
CATTGAAGAAAGTCCTCATA+GGG + chr1_4:51465466-51465485 None:intergenic 35.0%
AGAACTTAAGTGCTCTTCTT+TGG + chr1_4:51465498-51465517 None:intergenic 35.0%
GTTCTCTTAATCCACAATCA+TGG - chr1_4:51465513-51465532 Msa0168630:CDS 35.0%
ATCTTACATTGATGCAGAAG+AGG + chr1_4:51465582-51465601 None:intergenic 35.0%
TGTGTTACCGTTCTTTAAAC+CGG - chr1_4:51465723-51465742 Msa0168630:CDS 35.0%
AACATGACTCAAGTTCTTCA+TGG + chr1_4:51465777-51465796 None:intergenic 35.0%
!! TATCAGGTTTTTAAAGGCCT+TGG - chr1_4:51465832-51465851 Msa0168630:intron 35.0%
TTCACGAGAGGATTGTATTT+GGG - chr1_4:51465911-51465930 Msa0168630:intron 35.0%
ATGGTTGAAATATGAGAAGC+AGG - chr1_4:51465936-51465955 Msa0168630:intron 35.0%
TGGTTGAAATATGAGAAGCA+GGG - chr1_4:51465937-51465956 Msa0168630:intron 35.0%
GGTAAACGTCAAAACGAATA+TGG - chr1_4:51465988-51466007 Msa0168630:intron 35.0%
ATATGAGACTCCACATCTAT+CGG + chr1_4:51466015-51466034 None:intergenic 35.0%
TCATATTCCTTCTGATGTCA+AGG - chr1_4:51466029-51466048 Msa0168630:intron 35.0%
ATTCATCAAAACACTCTCCT+GGG + chr1_4:51466061-51466080 None:intergenic 35.0%
!!! AGGAGAGTGTTTTGATGAAT+GGG - chr1_4:51466061-51466080 Msa0168630:intron 35.0%
CCATTTAACATTGCACGAAA+CGG + chr1_4:51466171-51466190 None:intergenic 35.0%
CGTTTCGTGCAATGTTAAAT+GGG - chr1_4:51466169-51466188 Msa0168630:intron 35.0%
GTTTCGTGCAATGTTAAATG+GGG - chr1_4:51466170-51466189 Msa0168630:intron 35.0%
CAATGTTAAATGGGGATTTC+TGG - chr1_4:51466178-51466197 Msa0168630:intron 35.0%
AATCTCTCCAAAACTTCTGT+TGG - chr1_4:51466302-51466321 Msa0168630:intron 35.0%
TTGTGTCTGAACTAGAGTTA+AGG + chr1_4:51466629-51466648 None:intergenic 35.0%
!! TTTGAGAGCGCTGTAAATAA+TGG - chr1_4:51466771-51466790 Msa0168630:intron 35.0%
TGACTCTATAAAAGGTGAGA+AGG - chr1_4:51466827-51466846 Msa0168630:intron 35.0%
ATGTAGGGATATACAAGAGT+GGG + chr1_4:51466984-51467003 None:intergenic 35.0%
GCTGAAATTAATCGGATACT+TGG - chr1_4:51467053-51467072 Msa0168630:intron 35.0%
ATAAGGCTTAGATGCATTTC+TGG - chr1_4:51467581-51467600 Msa0168630:intron 35.0%
ATCCTGAAAGTTGTGAAACA+GGG + chr1_4:51467670-51467689 None:intergenic 35.0%
AATCCTGAAAGTTGTGAAAC+AGG + chr1_4:51467671-51467690 None:intergenic 35.0%
ATTGCCACATCAAAATAGAC+AGG + chr1_4:51467767-51467786 None:intergenic 35.0%
!!! TGTCTATTTTGATGTGGCAA+TGG - chr1_4:51467766-51467785 Msa0168630:CDS 35.0%
AATGACTAAAAATTTGGCGG+TGG - chr1_4:51467834-51467853 Msa0168630:CDS 35.0%
! CACTCTGTTTCACAATTTTC+GGG + chr1_4:51467868-51467887 None:intergenic 35.0%
!!! AAACCCGGTTTTAGAAATAG+GGG - chr1_4:51467893-51467912 Msa0168630:CDS 35.0%
GAATTCTACACGTACATAAC+AGG + chr1_4:51468003-51468022 None:intergenic 35.0%
CACTCTTCAAACTTAAGTGT+TGG + chr1_4:51468053-51468072 None:intergenic 35.0%
TTGAATGTAGCCACATGTAT+TGG + chr1_4:51468094-51468113 None:intergenic 35.0%
TACTTACACAGACACAAACA+CGG + chr1_4:51468168-51468187 None:intergenic 35.0%
TCTCTATCAAAACAACCACA+AGG - chr1_4:51468197-51468216 Msa0168630:CDS 35.0%
! ATGTGGATTTTTACTCCTTG+TGG + chr1_4:51468215-51468234 None:intergenic 35.0%
TGTCAGATTCATTTACTCCA+TGG + chr1_4:51468355-51468374 None:intergenic 35.0%
GCATGAAAGACTTGTATATG+AGG - chr1_4:51468452-51468471 Msa0168630:CDS 35.0%
GTATGATACTGGTCATTATG+AGG - chr1_4:51468485-51468504 Msa0168630:CDS 35.0%
ATACTGGTCATTATGAGGAA+GGG - chr1_4:51468490-51468509 Msa0168630:CDS 35.0%
!! AAATGGACTCTTCAGCTTTT+TGG + chr1_4:51468518-51468537 None:intergenic 35.0%
! TTTTCTATTGTACCACCTTC+TGG - chr1_4:51468689-51468708 Msa0168630:CDS 35.0%
AGAGAAATATTTCCAGAAGG+TGG + chr1_4:51468704-51468723 None:intergenic 35.0%
! TTGTAGAAGTTCTGATGTGT+AGG - chr1_4:51468819-51468838 Msa0168630:CDS 35.0%
! TCTAGGTAACACCAATTTTG+TGG - chr1_4:51468843-51468862 Msa0168630:CDS 35.0%
TTTGTGGTAAGATAACATGC+AGG - chr1_4:51468859-51468878 Msa0168630:CDS 35.0%
TTGTGGTAAGATAACATGCA+GGG - chr1_4:51468860-51468879 Msa0168630:CDS 35.0%
! ATGTTTTCACAAAGCAAACG+AGG - chr1_4:51469146-51469165 Msa0168630:CDS 35.0%
GGTATTAATACATTCTGCCA+AGG + chr1_4:51469172-51469191 None:intergenic 35.0%
TGTAGCATCACATCATTTCT+AGG - chr1_4:51469228-51469247 Msa0168630:CDS 35.0%
AACACTTCCAAGATTGTTCA+GGG + chr1_4:51469329-51469348 None:intergenic 35.0%
AAACACTTCCAAGATTGTTC+AGG + chr1_4:51469330-51469349 None:intergenic 35.0%
!!! GGAAGTGTTTTTGTTGATCA+TGG - chr1_4:51469340-51469359 Msa0168630:CDS 35.0%
!!! TCGAGTATGGTGGATTTTAA+GGG + chr1_4:51469401-51469420 None:intergenic 35.0%
AATGACCAAACTTATCGAGA+AGG - chr1_4:51469483-51469502 Msa0168630:intron 35.0%
! TTTTGCCTTCTCGATAAGTT+TGG + chr1_4:51469491-51469510 None:intergenic 35.0%
!!! CAGCAGGTTGATATTTTTAC+TGG - chr1_4:51469629-51469648 Msa0168630:exon 35.0%
!! GGTTGATATTTTTACTGGAG+TGG - chr1_4:51469634-51469653 Msa0168630:exon 35.0%
!! GAATGTGATTGCAGTTTTGA+TGG - chr1_4:51469719-51469738 Msa0168630:five_prime_UTR 35.0%
!! AGTTTTGATGGACAACCATA+AGG - chr1_4:51469731-51469750 Msa0168630:five_prime_UTR 35.0%
GGATAAGCCACATATATATC+TGG + chr1_4:51470188-51470207 None:intergenic 35.0%
AATAGTGGCTGCAACTTCTA+TGG - chr1_4:51464821-51464840 Msa0168630:three_prime_UTR 40.0%
TCTTTCTGTTGTTGGTGTGT+TGG + chr1_4:51464850-51464869 None:intergenic 40.0%
CACCAACAACAGAAAGATAG+TGG - chr1_4:51464853-51464872 Msa0168630:three_prime_UTR 40.0%
TCCCACTATCTTTCTGTTGT+TGG + chr1_4:51464858-51464877 None:intergenic 40.0%
AAGGGTTTGAAGATGAAAGG+AGG + chr1_4:51464958-51464977 None:intergenic 40.0%
TATGCAGGAAAGGGTCAAAT+GGG + chr1_4:51465047-51465066 None:intergenic 40.0%
ATATGCAGGAAAGGGTCAAA+TGG + chr1_4:51465048-51465067 None:intergenic 40.0%
! TTTGAGGTTGAGGGTAATAG+TGG - chr1_4:51465326-51465345 Msa0168630:CDS 40.0%
!!! GTGGAGATCTGGGATTTTTT+TGG - chr1_4:51465431-51465450 Msa0168630:intron 40.0%
TTGGTGTATTATGCCCTATG+AGG - chr1_4:51465450-51465469 Msa0168630:intron 40.0%
CCATTGAAGAAAGTCCTCAT+AGG + chr1_4:51465467-51465486 None:intergenic 40.0%
CCTATGAGGACTTTCTTCAA+TGG - chr1_4:51465464-51465483 Msa0168630:intron 40.0%
TCAACTTGAAGCCATGATTG+TGG + chr1_4:51465527-51465546 None:intergenic 40.0%
!! TCATGGCTTCAAGTTGAAAG+AGG - chr1_4:51465530-51465549 Msa0168630:CDS 40.0%
!! CATGGCTTCAAGTTGAAAGA+GGG - chr1_4:51465531-51465550 Msa0168630:CDS 40.0%
GAGGATTGTGGTGACAATTT+GGG + chr1_4:51465563-51465582 None:intergenic 40.0%
AGAGGATTGTGGTGACAATT+TGG + chr1_4:51465564-51465583 None:intergenic 40.0%
ATTGATGCAGAAGAGGATTG+TGG + chr1_4:51465575-51465594 None:intergenic 40.0%
TTAAAGAACGGTAACACAGG+TGG + chr1_4:51465721-51465740 None:intergenic 40.0%
GGTTTAAAGAACGGTAACAC+AGG + chr1_4:51465724-51465743 None:intergenic 40.0%
ACTTGAGTCATGTTCTTCAC+AGG - chr1_4:51465783-51465802 Msa0168630:intron 40.0%
GCATCAGTTTAACATCACCA+AGG + chr1_4:51465852-51465871 None:intergenic 40.0%
GTTCACGAGAGGATTGTATT+TGG - chr1_4:51465910-51465929 Msa0168630:intron 40.0%
TCACGAGAGGATTGTATTTG+GGG - chr1_4:51465912-51465931 Msa0168630:intron 40.0%
GGTTGAAATATGAGAAGCAG+GGG - chr1_4:51465938-51465957 Msa0168630:intron 40.0%
GTTGAAATATGAGAAGCAGG+GGG - chr1_4:51465939-51465958 Msa0168630:intron 40.0%
!! CTAGTTGCTGATTTGTTGAC+TGG - chr1_4:51465967-51465986 Msa0168630:intron 40.0%
GAACTTACCTTGACATCAGA+AGG + chr1_4:51466039-51466058 None:intergenic 40.0%
CATTCATCAAAACACTCTCC+TGG + chr1_4:51466062-51466081 None:intergenic 40.0%
!!! CAGGAGAGTGTTTTGATGAA+TGG - chr1_4:51466060-51466079 Msa0168630:intron 40.0%
TTTAACATTGCACGAAACGG+CGG + chr1_4:51466168-51466187 None:intergenic 40.0%
CCGTTTCGTGCAATGTTAAA+TGG - chr1_4:51466168-51466187 Msa0168630:intron 40.0%
GAGTTCGATAGCATCTTCTT+TGG + chr1_4:51466409-51466428 None:intergenic 40.0%
AGAAGATGCTATCGAACTCA+TGG - chr1_4:51466410-51466429 Msa0168630:intron 40.0%
CTTGTAAACAAGAAGCTGCA+AGG + chr1_4:51466464-51466483 None:intergenic 40.0%
AGTGAGGAAGATCACGTAAA+AGG + chr1_4:51466488-51466507 None:intergenic 40.0%
TCATGCTAATAAGCAGCAGT+TGG - chr1_4:51466542-51466561 Msa0168630:CDS 40.0%
! AGACACAACAGCTCATTTTC+TGG - chr1_4:51466641-51466660 Msa0168630:CDS 40.0%
!! CAACAGCTCATTTTCTGGAA+AGG - chr1_4:51466646-51466665 Msa0168630:CDS 40.0%
TACACATCCCAAACGATGAA+AGG + chr1_4:51466712-51466731 None:intergenic 40.0%
GGCCATGTTTATTCTGTTAC+TGG - chr1_4:51466792-51466811 Msa0168630:intron 40.0%
! GCTCGACTTGACTCTATAAA+AGG - chr1_4:51466819-51466838 Msa0168630:intron 40.0%
! CAAGTTCAGTTGCTTTCTCA+AGG + chr1_4:51466959-51466978 None:intergenic 40.0%
TGTAGGGATATACAAGAGTG+GGG + chr1_4:51466983-51467002 None:intergenic 40.0%
CATGTAGGGATATACAAGAG+TGG + chr1_4:51466985-51467004 None:intergenic 40.0%
ATAGGGCTGCATCTTTAATG+AGG - chr1_4:51467006-51467025 Msa0168630:intron 40.0%
ATGAGGACAGAGAATTCTCA+AGG - chr1_4:51467023-51467042 Msa0168630:intron 40.0%
!! GTGCACTGGCTGAAATTAAT+CGG - chr1_4:51467045-51467064 Msa0168630:intron 40.0%
AATCGCTTGAACATCACGAA+GGG + chr1_4:51467150-51467169 None:intergenic 40.0%
TCCGCGTTATAGAATGTTTG+AGG - chr1_4:51467181-51467200 Msa0168630:intron 40.0%
CCCTCAAACATTCTATAACG+CGG + chr1_4:51467185-51467204 None:intergenic 40.0%
CCGCGTTATAGAATGTTTGA+GGG - chr1_4:51467182-51467201 Msa0168630:intron 40.0%
CGCGTTATAGAATGTTTGAG+GGG - chr1_4:51467183-51467202 Msa0168630:intron 40.0%
GCATGTTGAACATTTGACGA+CGG - chr1_4:51467244-51467263 Msa0168630:intron 40.0%
GGGCACAATTATATGACTGT+TGG - chr1_4:51467276-51467295 Msa0168630:intron 40.0%
TCAGATGCTTGAATCTGATG+CGG - chr1_4:51467337-51467356 Msa0168630:intron 40.0%
ATTCACTCACATCATACCTG+AGG + chr1_4:51467400-51467419 None:intergenic 40.0%
GTATGATGTGAGTGAATGTG+TGG - chr1_4:51467403-51467422 Msa0168630:intron 40.0%
TAACTCCACTGTTGAACCTT+AGG - chr1_4:51467464-51467483 Msa0168630:intron 40.0%
AACTCCACTGTTGAACCTTA+GGG - chr1_4:51467465-51467484 Msa0168630:intron 40.0%
TATTCCCTAAGGTTCAACAG+TGG + chr1_4:51467472-51467491 None:intergenic 40.0%
ACTGTTGAACCTTAGGGAAT+AGG - chr1_4:51467471-51467490 Msa0168630:intron 40.0%
TCAGAACATCCTATTCCCTA+AGG + chr1_4:51467483-51467502 None:intergenic 40.0%
AGGGAATAGGATGTTCTGAT+TGG - chr1_4:51467484-51467503 Msa0168630:intron 40.0%
TCGCAAGTTCATGACTAAGA+AGG - chr1_4:51467545-51467564 Msa0168630:intron 40.0%
AGCGAAAGAACTCCAACATT+GGG + chr1_4:51467706-51467725 None:intergenic 40.0%
TGGCATTGTCATTAATGACG+TGG - chr1_4:51467730-51467749 Msa0168630:CDS 40.0%
!!! GTGACCTGTCTATTTTGATG+TGG - chr1_4:51467760-51467779 Msa0168630:CDS 40.0%
TTGCTGATGTGACAATGAAG+AGG + chr1_4:51467813-51467832 None:intergenic 40.0%
AAACAGAGTGACCAAAAACC+CGG - chr1_4:51467878-51467897 Msa0168630:CDS 40.0%
!!! AACCCGGTTTTAGAAATAGG+GGG - chr1_4:51467894-51467913 Msa0168630:CDS 40.0%
!! AGTCCCCCTATTTCTAAAAC+CGG + chr1_4:51467900-51467919 None:intergenic 40.0%
! GCACTTTTGATCCCCATATT+TGG + chr1_4:51467939-51467958 None:intergenic 40.0%
TACACGTACATAACAGGAAG+AGG + chr1_4:51467997-51468016 None:intergenic 40.0%
GTTTCAGACACCAATACATG+TGG - chr1_4:51468081-51468100 Msa0168630:CDS 40.0%
ACGTAAAGCTTGGATCTCAA+AGG + chr1_4:51468249-51468268 None:intergenic 40.0%
AATGCATATTCTCCTGCTTG+AGG - chr1_4:51468286-51468305 Msa0168630:CDS 40.0%
ATGAAAGAAGATCCTCAAGC+AGG + chr1_4:51468301-51468320 None:intergenic 40.0%
ATTTAGGCTAAACTGTCCTG+AGG - chr1_4:51468383-51468402 Msa0168630:CDS 40.0%
AAAGACTTGTATATGAGGGG+TGG - chr1_4:51468457-51468476 Msa0168630:CDS 40.0%
!! GGGTGGATTTTGTATGATAC+TGG - chr1_4:51468474-51468493 Msa0168630:CDS 40.0%
GATACTGGTCATTATGAGGA+AGG - chr1_4:51468489-51468508 Msa0168630:CDS 40.0%
TTTCCTAAAGGCCTATGCAT+TGG - chr1_4:51468563-51468582 Msa0168630:CDS 40.0%
TATTGAACCAAGACCAGAGT+CGG + chr1_4:51468589-51468608 None:intergenic 40.0%
ATTATCAGAAGGACACCTCA+AGG + chr1_4:51468646-51468665 None:intergenic 40.0%
AACAATCAGTTACCACACAC+AGG - chr1_4:51468728-51468747 Msa0168630:CDS 40.0%
GTTTGTACTTAACCTGTGTG+TGG + chr1_4:51468743-51468762 None:intergenic 40.0%
TGTGGTAAGATAACATGCAG+GGG - chr1_4:51468861-51468880 Msa0168630:CDS 40.0%
! AGATAACATGCAGGGGTATA+AGG - chr1_4:51468868-51468887 Msa0168630:CDS 40.0%
TACGAAGTCAGTCAATGTGA+TGG - chr1_4:51468955-51468974 Msa0168630:CDS 40.0%
TCAGGGCCTGGTAAATTAAA+TGG + chr1_4:51469312-51469331 None:intergenic 40.0%
TAATATAGCAATCGGCTGCT+TGG + chr1_4:51469375-51469394 None:intergenic 40.0%
!!! CTCGAGTATGGTGGATTTTA+AGG + chr1_4:51469402-51469421 None:intergenic 40.0%
GAAGGCAAAAAACAATGCGT+CGG - chr1_4:51469501-51469520 Msa0168630:intron 40.0%
TATGAGAAGAGATCCGAGTA+TGG - chr1_4:51469526-51469545 Msa0168630:CDS 40.0%
ATGAGAAGAGATCCGAGTAT+GGG - chr1_4:51469527-51469546 Msa0168630:CDS 40.0%
! CCAACATTTCTTGGTGGTTT+GGG + chr1_4:51469899-51469918 None:intergenic 40.0%
! TCCAACATTTCTTGGTGGTT+TGG + chr1_4:51469900-51469919 None:intergenic 40.0%
GAAGTTCCAACATTTCTTGG+TGG + chr1_4:51469905-51469924 None:intergenic 40.0%
GCTGATGATTGTACAAATGC+TGG + chr1_4:51469989-51470008 None:intergenic 40.0%
!!! TGGGTACGAAAGTTTTGGCT+AGG + chr1_4:51465028-51465047 None:intergenic 45.0%
! GGTTGTTGTTGTGGAGATCT+GGG - chr1_4:51465421-51465440 Msa0168630:intron 45.0%
! AGAGGATTGTATTTGGGGCA+TGG - chr1_4:51465917-51465936 Msa0168630:intron 45.0%
TGATGTCAAGGTAAGTTCCC+AGG - chr1_4:51466041-51466060 Msa0168630:intron 45.0%
CTCACTGCTTGAGCGATAAT+CGG - chr1_4:51466502-51466521 Msa0168630:CDS 45.0%
TCACTGCTTGAGCGATAATC+GGG - chr1_4:51466503-51466522 Msa0168630:CDS 45.0%
TAAGCAGCAGTTGGCAGTTA+TGG - chr1_4:51466551-51466570 Msa0168630:CDS 45.0%
TTGGCAGTTATGGTAGGTCA+AGG - chr1_4:51466561-51466580 Msa0168630:CDS 45.0%
AAGCAACAAGCAGAGACTGT+TGG - chr1_4:51466686-51466705 Msa0168630:CDS 45.0%
!! ACTGTTGGCCTTTCATCGTT+TGG - chr1_4:51466701-51466720 Msa0168630:CDS 45.0%
!! CTGTTGGCCTTTCATCGTTT+GGG - chr1_4:51466702-51466721 Msa0168630:CDS 45.0%
TGGGATGTGTAAGACTCTTG+CGG - chr1_4:51466721-51466740 Msa0168630:intron 45.0%
GATGCAGCCCTATACATGTA+GGG + chr1_4:51466999-51467018 None:intergenic 45.0%
AGATGCAGCCCTATACATGT+AGG + chr1_4:51467000-51467019 None:intergenic 45.0%
AGAGAATTCTCAAGGTGCAC+TGG - chr1_4:51467031-51467050 Msa0168630:intron 45.0%
CGTTAGAATGCTTGGAACTG+CGG - chr1_4:51467087-51467106 Msa0168630:intron 45.0%
GAATCGCTTGAACATCACGA+AGG + chr1_4:51467151-51467170 None:intergenic 45.0%
ATTTGACGACGGCAGATTGT+TGG - chr1_4:51467255-51467274 Msa0168630:intron 45.0%
TTTGACGACGGCAGATTGTT+GGG - chr1_4:51467256-51467275 Msa0168630:intron 45.0%
CTTGAATCTGATGCGGCAAA+AGG - chr1_4:51467344-51467363 Msa0168630:intron 45.0%
TGCCCTGTTTCACAACTTTC+AGG - chr1_4:51467665-51467684 Msa0168630:intron 45.0%
CAGCGAAAGAACTCCAACAT+TGG + chr1_4:51467707-51467726 None:intergenic 45.0%
TTGGAGTTCTTTCGCTGATG+TGG - chr1_4:51467710-51467729 Msa0168630:CDS 45.0%
!! GTCCCCCTATTTCTAAAACC+GGG + chr1_4:51467899-51467918 None:intergenic 45.0%
GAGATCCAAGCTTTACGTCT+TGG - chr1_4:51468251-51468270 Msa0168630:CDS 45.0%
GTACTCCAAGACGTAAAGCT+TGG + chr1_4:51468259-51468278 None:intergenic 45.0%
TGCGGAGTTTACAGTTAGCT+TGG - chr1_4:51468412-51468431 Msa0168630:CDS 45.0%
CCTTTGCGCAGATTATCAGA+AGG + chr1_4:51468657-51468676 None:intergenic 45.0%
CCTTCTGATAATCTGCGCAA+AGG - chr1_4:51468654-51468673 Msa0168630:CDS 45.0%
TGATAATCTGCGCAAAGGTC+AGG - chr1_4:51468659-51468678 Msa0168630:CDS 45.0%
! AGTTCTGATGTGTAGGCTCT+AGG - chr1_4:51468826-51468845 Msa0168630:CDS 45.0%
! GTCAATGTGATGGAGAGAAG+AGG - chr1_4:51468965-51468984 Msa0168630:CDS 45.0%
!! AGAAGAGGAAGTGCTAGCTA+GGG - chr1_4:51468980-51468999 Msa0168630:CDS 45.0%
TGAGAAGAGATCCGAGTATG+GGG - chr1_4:51469528-51469547 Msa0168630:CDS 45.0%
CACAAAGGCAGATCTTGAGA+TGG - chr1_4:51469561-51469580 Msa0168630:CDS 45.0%
CTGTAAGGATACACACGAAG+TGG + chr1_4:51469601-51469620 None:intergenic 45.0%
GATGGACAACCATAAGGAAC+TGG - chr1_4:51469737-51469756 Msa0168630:five_prime_UTR 45.0%
CAATGGCTTCCAGTTCCTTA+TGG + chr1_4:51469749-51469768 None:intergenic 45.0%
!! AGCTCTAGATAGCTCAGCAA+TGG + chr1_4:51469766-51469785 None:intergenic 45.0%
CCCAAACCACCAAGAAATGT+TGG - chr1_4:51469896-51469915 Msa0168630:five_prime_UTR 45.0%
CAAACTTGACTCATGGTTCG+TGG + chr1_4:51469944-51469963 None:intergenic 45.0%
TAGCTCGCAAACTTGACTCA+TGG + chr1_4:51469951-51469970 None:intergenic 45.0%
AGTCAAGTTTGCGAGCTATG+AGG - chr1_4:51469953-51469972 Msa0168630:five_prime_UTR 45.0%
! GGGCATTCCTCTCTTTAGAA+AGG + chr1_4:51470115-51470134 None:intergenic 45.0%
!! AAATAAAAAATAAGATTAAT+GGG + chr1_4:51465165-51465184 None:intergenic 5.0%
!! AAAATAAAAAATAAGATTAA+TGG + chr1_4:51465166-51465185 None:intergenic 5.0%
!!! AAAAAAAAAAAACTATTTTT+AGG + chr1_4:51467969-51467988 None:intergenic 5.0%
! GGGTTGTTGTTGTGGAGATC+TGG - chr1_4:51465420-51465439 Msa0168630:intron 50.0%
CGAATATGGGCCGATAGATG+TGG - chr1_4:51466002-51466021 Msa0168630:intron 50.0%
! TTTCTGGGAATCGTCGTCTG+AGG - chr1_4:51466194-51466213 Msa0168630:intron 50.0%
CTTATCGCTCTCATACCCGA+AGG + chr1_4:51466249-51466268 None:intergenic 50.0%
CGATTATCGCTCAAGCAGTG+AGG + chr1_4:51466504-51466523 None:intergenic 50.0%
CAGCAGTTGGCAGTTATGGT+AGG - chr1_4:51466555-51466574 Msa0168630:CDS 50.0%
ATTTCCCCTGTCACTCGACT+CGG - chr1_4:51466879-51466898 Msa0168630:intron 50.0%
CATGCTCAAGCACAAGAGTG+CGG + chr1_4:51467229-51467248 None:intergenic 50.0%
GACAGTCATTGCTTCTCCTC+AGG - chr1_4:51467381-51467400 Msa0168630:intron 50.0%
CACTTCTCGAAGATGCCTTG+AGG - chr1_4:51468628-51468647 Msa0168630:CDS 50.0%
ATCTGCGCAAAGGTCAGGTA+CGG - chr1_4:51468664-51468683 Msa0168630:CDS 50.0%
!! GAGAAGAGGAAGTGCTAGCT+AGG - chr1_4:51468979-51468998 Msa0168630:CDS 50.0%
TCACAAAGCAAACGAGGCCT+TGG - chr1_4:51469152-51469171 Msa0168630:CDS 50.0%
TACCAGGCCCTGAACAATCT+TGG - chr1_4:51469319-51469338 Msa0168630:CDS 50.0%
TTCCAAGATTGTTCAGGGCC+TGG + chr1_4:51469324-51469343 None:intergenic 50.0%
! TGACAAGGCTGCTGCTTACA+AGG - chr1_4:51469459-51469478 Msa0168630:intron 50.0%
GAGTTCACGATCCCCATACT+CGG + chr1_4:51469542-51469561 None:intergenic 50.0%
TGGGGATCGTGAACTCACAA+AGG - chr1_4:51469546-51469565 Msa0168630:CDS 50.0%
CCTGCTGCTCGATATCTGTA+AGG + chr1_4:51469616-51469635 None:intergenic 50.0%
CCTTACAGATATCGAGCAGC+AGG - chr1_4:51469613-51469632 Msa0168630:CDS 50.0%
GCAGCGTTCCATGAACACAA+GGG - chr1_4:51469825-51469844 Msa0168630:five_prime_UTR 50.0%
CAGCGTTCCATGAACACAAG+GGG - chr1_4:51469826-51469845 Msa0168630:five_prime_UTR 50.0%
AGCGTTCCATGAACACAAGG+GGG - chr1_4:51469827-51469846 Msa0168630:five_prime_UTR 50.0%
ACGGTAACACAGGTGGCTGT+TGG + chr1_4:51465714-51465733 None:intergenic 55.0%
AAAGAAGCCTCCGCGAAGCA+TGG - chr1_4:51465872-51465891 Msa0168630:intron 55.0%
GAGCGAGTTCTGTTCACGAG+AGG - chr1_4:51465899-51465918 Msa0168630:intron 55.0%
CTGCTTGAGCGATAATCGGG+TGG - chr1_4:51466506-51466525 Msa0168630:CDS 55.0%
CTTGAGCGATAATCGGGTGG+TGG - chr1_4:51466509-51466528 Msa0168630:CDS 55.0%
TCCATCCGAGTCGAGTGACA+GGG + chr1_4:51466887-51466906 None:intergenic 55.0%
ATCCATCCGAGTCGAGTGAC+AGG + chr1_4:51466888-51466907 None:intergenic 55.0%
TTCCACCTCGCACCCAATGT+TGG - chr1_4:51467691-51467710 Msa0168630:intron 55.0%
GAACTCCAACATTGGGTGCG+AGG + chr1_4:51467699-51467718 None:intergenic 55.0%
CACAGACACAAACACGGCAC+TGG + chr1_4:51468162-51468181 None:intergenic 55.0%
ACTGTCCTGAGGCAGCTATG+CGG - chr1_4:51468394-51468413 Msa0168630:CDS 55.0%
AAACTCCGCATAGCTGCCTC+AGG + chr1_4:51468402-51468421 None:intergenic 55.0%
CGGCCAATGCATAGGCCTTT+AGG + chr1_4:51468569-51468588 None:intergenic 55.0%
ACCAGAGTCGGCCAATGCAT+AGG + chr1_4:51468577-51468596 None:intergenic 55.0%
!! AGAGGAAGTGCTAGCTAGGG+AGG - chr1_4:51468983-51469002 Msa0168630:CDS 55.0%
CACCATACTCGAGCCCATCA+GGG - chr1_4:51469409-51469428 Msa0168630:intron 55.0%
AACACGCGCAAGACCCTGAT+GGG + chr1_4:51469425-51469444 None:intergenic 55.0%
ACGCTGCGCGTAGATGTAAG+AGG + chr1_4:51469812-51469831 None:intergenic 55.0%
CGCAGCGTTCCATGAACACA+AGG - chr1_4:51469824-51469843 Msa0168630:five_prime_UTR 55.0%
GGACATCCCCCTTGTGTTCA+TGG + chr1_4:51469836-51469855 None:intergenic 55.0%
GACAGTCTCTTAGCGCACTC+AGG + chr1_4:51469857-51469876 None:intergenic 55.0%
CCATCCGAGTCGAGTGACAG+GGG + chr1_4:51466886-51466905 None:intergenic 60.0%
CTCCAACATTGGGTGCGAGG+TGG + chr1_4:51467696-51467715 None:intergenic 60.0%
! GCCTATGCATTGGCCGACTC+TGG - chr1_4:51468573-51468592 Msa0168630:CDS 60.0%
! GCATTGGCCGACTCTGGTCT+TGG - chr1_4:51468579-51468598 Msa0168630:CDS 60.0%
!! CCTGATGGGCTCGAGTATGG+TGG + chr1_4:51469411-51469430 None:intergenic 60.0%
CCACCATACTCGAGCCCATC+AGG - chr1_4:51469408-51469427 Msa0168630:intron 60.0%
!! GACCCTGATGGGCTCGAGTA+TGG + chr1_4:51469414-51469433 None:intergenic 60.0%
GAACACGCGCAAGACCCTGA+TGG + chr1_4:51469426-51469445 None:intergenic 60.0%
CTGTCGTGCTGCACTCTCAG+TGG - chr1_4:51469872-51469891 Msa0168630:five_prime_UTR 60.0%
GAAGCCTCCGCGAAGCATGG+CGG - chr1_4:51465875-51465894 Msa0168630:intron 65.0%
TCGCTCTCCGCCATGCTTCG+CGG + chr1_4:51465885-51465904 None:intergenic 65.0%
!! CCCCTGTCACTCGACTCGGA+TGG - chr1_4:51466883-51466902 Msa0168630:intron 65.0%
CTCTCCGCCATGCTTCGCGG+AGG + chr1_4:51465882-51465901 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 51464816 51470296 51464816 ID=Msa0168630;Name=Msa0168630
chr1_4 mRNA 51464816 51470296 51464816 ID=Msa0168630-mRNA-1;Parent=Msa0168630;Name=Msa0168630-mRNA-1;_AED=0.02;_eAED=0.02;_QI=651|1|1|1|1|1|5|343|886
chr1_4 exon 51464816 51465379 51464816 ID=Msa0168630-mRNA-1:exon:15140;Parent=Msa0168630-mRNA-1
chr1_4 exon 51465478 51465787 51465478 ID=Msa0168630-mRNA-1:exon:15139;Parent=Msa0168630-mRNA-1
chr1_4 exon 51466432 51466723 51466432 ID=Msa0168630-mRNA-1:exon:15138;Parent=Msa0168630-mRNA-1
chr1_4 exon 51467710 51469419 51467710 ID=Msa0168630-mRNA-1:exon:15137;Parent=Msa0168630-mRNA-1
chr1_4 exon 51469518 51470296 51469518 ID=Msa0168630-mRNA-1:exon:15136;Parent=Msa0168630-mRNA-1
chr1_4 five_prime_UTR 51469646 51470296 51469646 ID=Msa0168630-mRNA-1:five_prime_utr;Parent=Msa0168630-mRNA-1
chr1_4 CDS 51469518 51469645 51469518 ID=Msa0168630-mRNA-1:cds;Parent=Msa0168630-mRNA-1
chr1_4 CDS 51467710 51469419 51467710 ID=Msa0168630-mRNA-1:cds;Parent=Msa0168630-mRNA-1
chr1_4 CDS 51466432 51466723 51466432 ID=Msa0168630-mRNA-1:cds;Parent=Msa0168630-mRNA-1
chr1_4 CDS 51465478 51465787 51465478 ID=Msa0168630-mRNA-1:cds;Parent=Msa0168630-mRNA-1
chr1_4 CDS 51465159 51465379 51465159 ID=Msa0168630-mRNA-1:cds;Parent=Msa0168630-mRNA-1
chr1_4 three_prime_UTR 51464816 51465158 51464816 ID=Msa0168630-mRNA-1:three_prime_utr;Parent=Msa0168630-mRNA-1
Gene Sequence

>Msa0168630

ATGAGGACTTTCTTCAATGGAGAATCATCCAAAGAAGAGCACTTAAGTTCTCTTAATCCACAATCATGGCTTCAAGTTGAAAGAGGGAAGCTTCCCAAATTGTCACCACAATCCTCTTCTGCATCAATTGAATCTCTAATCAAGGTCCAACAGCCACCTGTGTTACCGTTCTTTAAACCGGTTGATTATGTCGAAGTTTTAGCTCAAATCCATGAAGAACTTGAGTCATGTTCTTCACAGGAACAGTCAAATCTGTTTCTGTTTCAATATCAGGTTTTTAAAGGCCTTGGTGATGTTAAACTGATGCAAAGAAGCCTCCGCGAAGCATGGCGGAGAGCGAGTTCTGTTCACGAGAGGATTGTATTTGGGGCATGGTTGAAATATGAGAAGCAGGGGGAAGAACTAGTTGCTGATTTGTTGACTGGTAAACGTCAAAACGAATATGGGCCGATAGATGTGGAGTCTCATATTCCTTCTGATGTCAAGGTAAGTTCCCAGGAGAGTGTTTTGATGAATGGGAACAACACTTCACAATATGTTGTTTTTATAATTGGCGATGAGAGGATAGTCTGTGATAGACAAAAGTTTTCTGAACTGTCACCGCCGTTTCGTGCAATGTTAAATGGGGATTTCTGGGAATCGTCGTCTGAGGCTATAGATTTGTCTGAAAACAATATATCTCCTTCGGGTATGAGAGCGATAAGTTATTTCACTATGACTGGTAGTTTACTTGAACAAATCTCTCCAAAACTTCTGTTGGAGATATTAGTTTTTTCCAACAAGTATTGTTGTGATAGATTAAAAGAGGCTTGTGATAGAAGACTTGCATCCTTAGTTACTTCCAAAGAAGATGCTATCGAACTCATGGAATATGCTCTTGATGAGAACTCAGTTGTCCTTGCAGCTTCTTGTTTACAAGTCCTTTTACGTGATCTTCCTCACTGCTTGAGCGATAATCGGGTGGTGGATATATTTCTTCATGCTAATAAGCAGCAGTTGGCAGTTATGGTAGGTCAAGGTTTATTTGCGCTTTTCTGCTTCTTAAGCGAAGTTTCTATGAACCTTAACTCTAGTTCAGACACAACAGCTCATTTTCTGGAAAGGTTAGCTGATTTTGCTGAAAGCAACAAGCAGAGACTGTTGGCCTTTCATCGTTTGGGATGTGTAAGACTCTTGCGGAAAGAATACGACGAAGCTCGCTGTCTTTTTGAGAGCGCTGTAAATAATGGCCATGTTTATTCTGTTACTGGTTTAGCTCGACTTGACTCTATAAAAGGTGAGAAGGATTTATCTTATGAGAAGATCAGCTCAGTCATTTCCCCTGTCACTCGACTCGGATGGATGTACCAAGAAAGATCACTATATTGTGATGATGATTTGAGATGGAAAGACCTTGAGAAAGCAACTGAACTTGACCCCACTCTTGTATATCCCTACATGTATAGGGCTGCATCTTTAATGAGGACAGAGAATTCTCAAGGTGCACTGGCTGAAATTAATCGGATACTTGGCTTTAAACTTTCGTTAGAATGCTTGGAACTGCGGTTTTTTATATTTCTGGCTCTTGAGGACTACAAAGCAGCCCTTCGTGATGTTCAAGCGATTCTTACTTTGTGTCCGCGTTATAGAATGTTTGAGGGGCGTGTAGCTGCATCTCAACTCCGCACTCTTGTGCTTGAGCATGTTGAACATTTGACGACGGCAGATTGTTGGGCACAATTATATGACTGTTGGTCTGCTGTTGATGATATTGAGTCTCTATCTGTTATTTATCAGATGCTTGAATCTGATGCGGCAAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTCAGGCTAAACTGTCCTGAGGCAGCTATGCGGAGTTTACAGTTAGCTTGGCAACATGCATCAAGTGAGCATGAAAGACTTGTATATGAGGGGTGGATTTTGTATGATACTGGTCATTATGAGGAAGGGCTCCAAAAAGCTGAAGAGTCCATTTGCATTAAAAGGTCTTTTGAGGCATTTTTCCTAAAGGCCTATGCATTGGCCGACTCTGGTCTTGGTTCAATATGTTCTTCAACTGTTATTTCACTTCTCGAAGATGCCTTGAGGTGTCCTTCTGATAATCTGCGCAAAGGTCAGGCCCTGAACAATCTTGGAAGTGTTTTTGTTGATCATGGAAAACTGGACCAAGCAGCCGATTGCTATATTAAAGCCCTTAAAATCCACCATACTCGAGCCCATCAGGGTCTTGCGCGTGTTCATTTTCTAAAAAATGACAAGGCTGCTGCTTACAAGGAAATGACCAAACTTATCGAGAAGGCAAAAAACAATGCGTCGGCGTATGAGAAGAGATCCGAGTATGGGGATCGTGAACTCACAAAGGCAGATCTTGAGATGGTGACTAGACTAGATCCACTTCGTGTGTATCCTTACAGATATCGAGCAGCAGTTTTGATGGACAACCATAAGGAACTGGAAGCCATTGCTGAGCTATCTAGAGCTATTGCATTTAAAGCTGATTTGCACCTCTTACATCTACGCGCAGCGTTCCATGAACACAAGGGGGATGTCCTGAGTGCGCTAAGAGACTGTCGTGCTGCACTCTCAGTGGACCCAAACCACCAAGAAATGTTGGAACTTCATACGCGTGTTAATAGCCACGAACCATGA
Protein sequence

>Msa0168630

MRTFFNGESSKEEHLSSLNPQSWLQVERGKLPKLSPQSSSASIESLIKVQQPPVLPFFKPVDYVEVLAQIHEELESCSSQEQSNLFLFQYQVFKGLGDVKLMQRSLREAWRRASSVHERIVFGAWLKYEKQGEELVADLLTGKRQNEYGPIDVESHIPSDVKVSSQESVLMNGNNTSQYVVFIIGDERIVCDRQKFSELSPPFRAMLNGDFWESSSEAIDLSENNISPSGMRAISYFTMTGSLLEQISPKLLLEILVFSNKYCCDRLKEACDRRLASLVTSKEDAIELMEYALDENSVVLAASCLQVLLRDLPHCLSDNRVVDIFLHANKQQLAVMVGQGLFALFCFLSEVSMNLNSSSDTTAHFLERLADFAESNKQRLLAFHRLGCVRLLRKEYDEARCLFESAVNNGHVYSVTGLARLDSIKGEKDLSYEKISSVISPVTRLGWMYQERSLYCDDDLRWKDLEKATELDPTLVYPYMYRAASLMRTENSQGALAEINRILGFKLSLECLELRFFIFLALEDYKAALRDVQAILTLCPRYRMFEGRVAASQLRTLVLEHVEHLTTADCWAQLYDCWSAVDDIESLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLAWQHASSEHERLVYEGWILYDTGHYEEGLQKAEESICIKRSFEAFFLKAYALADSGLGSICSSTVISLLEDALRCPSDNLRKGQALNNLGSVFVDHGKLDQAADCYIKALKIHHTRAHQGLARVHFLKNDKAAAYKEMTKLIEKAKNNASAYEKRSEYGDRELTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKELEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLSALRDCRAALSVDPNHQEMLELHTRVNSHEP*