Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133220 | RHN76626.1 | 99.043 | 209 | 2 | 0 | 1 | 209 | 78 | 286 | 7.77e-149 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133220 | sp|P31686|4CL1_SOYBN | 91.827 | 208 | 17 | 0 | 1 | 208 | 85 | 292 | 6.44e-130 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133220 | A0A396JED6 | 99.043 | 209 | 2 | 0 | 1 | 209 | 78 | 286 | 3.71e-149 | 425 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002710 | Msa1133220 | 0.803345 | 3.644795e-49 | -8.615850e-47 |
| Msa0005000 | Msa1133220 | -0.820297 | 7.389582e-53 | -8.615850e-47 |
| Msa0008290 | Msa1133220 | 0.800311 | 1.529884e-48 | -8.615850e-47 |
| Msa0014570 | Msa1133220 | 0.808826 | 2.559300e-50 | -8.615850e-47 |
| Msa0022750 | Msa1133220 | -0.820715 | 5.924420e-53 | -8.615850e-47 |
| Msa0032320 | Msa1133220 | 0.837520 | 4.952387e-57 | -8.615850e-47 |
| Msa0041860 | Msa1133220 | 0.810906 | 9.129169e-51 | -8.615850e-47 |
| Msa0048000 | Msa1133220 | 0.826298 | 2.928916e-54 | -8.615850e-47 |
| Msa0053050 | Msa1133220 | -0.804691 | 1.913014e-49 | -8.615850e-47 |
| Msa0055070 | Msa1133220 | 0.821914 | 3.133655e-53 | -8.615850e-47 |
| Msa0076700 | Msa1133220 | 0.808080 | 3.691625e-50 | -8.615850e-47 |
| Msa0077940 | Msa1133220 | 0.815875 | 7.387596e-52 | -8.615850e-47 |
| Msa0098390 | Msa1133220 | -0.814430 | 1.546629e-51 | -8.615850e-47 |
| Msa0101020 | Msa1133220 | 0.815995 | 6.947713e-52 | -8.615850e-47 |
| Msa0116790 | Msa1133220 | 0.807841 | 4.150794e-50 | -8.615850e-47 |
| Msa0119320 | Msa1133220 | 0.818354 | 2.048404e-52 | -8.615850e-47 |
| Msa0608200 | Msa1133220 | 0.804209 | 2.411406e-49 | -8.615850e-47 |
| Msa0626090 | Msa1133220 | 0.804071 | 2.575348e-49 | -8.615850e-47 |
| Msa0626280 | Msa1133220 | 0.822536 | 2.247521e-53 | -8.615850e-47 |
| Msa0648520 | Msa1133220 | 0.806899 | 6.574719e-50 | -8.615850e-47 |
| Msa0654930 | Msa1133220 | -0.800775 | 1.230109e-48 | -8.615850e-47 |
| Msa0689760 | Msa1133220 | 0.815990 | 6.965727e-52 | -8.615850e-47 |
| Msa0691050 | Msa1133220 | 0.845763 | 3.315069e-59 | -8.615850e-47 |
| Msa0698290 | Msa1133220 | 0.834681 | 2.603842e-56 | -8.615850e-47 |
| Msa0747720 | Msa1133220 | -0.831192 | 1.918275e-55 | -8.615850e-47 |
| Msa0751260 | Msa1133220 | 0.800317 | 1.525247e-48 | -8.615850e-47 |
| Msa0773310 | Msa1133220 | 0.800421 | 1.452719e-48 | -8.615850e-47 |
| Msa0795070 | Msa1133220 | 0.807122 | 5.898079e-50 | -8.615850e-47 |
| Msa0811130 | Msa1133220 | 0.808864 | 2.510954e-50 | -8.615850e-47 |
| Msa0133720 | Msa1133220 | 0.800736 | 1.252884e-48 | -8.615850e-47 |
| Msa0133820 | Msa1133220 | 0.800171 | 1.633503e-48 | -8.615850e-47 |
| Msa0133980 | Msa1133220 | -0.820589 | 6.332570e-53 | -8.615850e-47 |
| Msa0142460 | Msa1133220 | 0.849251 | 3.646018e-60 | -8.615850e-47 |
| Msa0144790 | Msa1133220 | 0.821204 | 4.572631e-53 | -8.615850e-47 |
| Msa0168630 | Msa1133220 | 0.834190 | 3.458943e-56 | -8.615850e-47 |
| Msa0170140 | Msa1133220 | 0.805830 | 1.104754e-49 | -8.615850e-47 |
| Msa0187030 | Msa1133220 | 0.817284 | 3.571077e-52 | -8.615850e-47 |
| Msa0191890 | Msa1133220 | 0.832796 | 7.705807e-56 | -8.615850e-47 |
| Msa0212040 | Msa1133220 | 0.827669 | 1.377065e-54 | -8.615850e-47 |
| Msa0213040 | Msa1133220 | 0.815302 | 9.913352e-52 | -8.615850e-47 |
| Msa0220290 | Msa1133220 | -0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0230370 | Msa1133220 | 0.810430 | 1.157277e-50 | -8.615850e-47 |
| Msa0376590 | Msa1133220 | 0.805483 | 1.305951e-49 | -8.615850e-47 |
| Msa0388960 | Msa1133220 | 0.800287 | 1.547192e-48 | -8.615850e-47 |
| Msa0422500 | Msa1133220 | 0.830732 | 2.488974e-55 | -8.615850e-47 |
| Msa0425900 | Msa1133220 | 0.840078 | 1.079760e-57 | -8.615850e-47 |
| Msa0426120 | Msa1133220 | 0.810758 | 9.830886e-51 | -8.615850e-47 |
| Msa0429090 | Msa1133220 | 0.841342 | 5.035144e-58 | -8.615850e-47 |
| Msa0436370 | Msa1133220 | 0.843229 | 1.593092e-58 | -8.615850e-47 |
| Msa0450350 | Msa1133220 | 0.839341 | 1.678989e-57 | -8.615850e-47 |
| Msa0468800 | Msa1133220 | 0.816186 | 6.296233e-52 | -8.615850e-47 |
| Msa0475500 | Msa1133220 | 0.845632 | 3.597761e-59 | -8.615850e-47 |
| Msa0982240 | Msa1133220 | 0.800439 | 1.440499e-48 | -8.615850e-47 |
| Msa1010070 | Msa1133220 | 0.803585 | 3.250386e-49 | -8.615850e-47 |
| Msa1021510 | Msa1133220 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
| Msa1032170 | Msa1133220 | 0.810800 | 9.625860e-51 | -8.615850e-47 |
| Msa1040520 | Msa1133220 | 0.852433 | 4.630228e-61 | -8.615850e-47 |
| Msa1068200 | Msa1133220 | -0.817569 | 3.081050e-52 | -8.615850e-47 |
| Msa1080160 | Msa1133220 | 0.806007 | 1.013750e-49 | -8.615850e-47 |
| Msa1084260 | Msa1133220 | 0.802171 | 6.366419e-49 | -8.615850e-47 |
| Msa1098270 | Msa1133220 | 0.813296 | 2.750762e-51 | -8.615850e-47 |
| Msa0251050 | Msa1133220 | 0.829740 | 4.345946e-55 | -8.615850e-47 |
| Msa0252540 | Msa1133220 | 0.814995 | 1.159713e-51 | -8.615850e-47 |
| Msa0253340 | Msa1133220 | 0.810630 | 1.047641e-50 | -8.615850e-47 |
| Msa0260810 | Msa1133220 | 0.821912 | 3.137866e-53 | -8.615850e-47 |
| Msa0264780 | Msa1133220 | 0.824745 | 6.832609e-54 | -8.615850e-47 |
| Msa0275660 | Msa1133220 | 0.802181 | 6.335953e-49 | -8.615850e-47 |
| Msa0277420 | Msa1133220 | 0.842577 | 2.375763e-58 | -8.615850e-47 |
| Msa0279260 | Msa1133220 | 0.811704 | 6.129392e-51 | -8.615850e-47 |
| Msa0292170 | Msa1133220 | 0.824183 | 9.265908e-54 | -8.615850e-47 |
| Msa0305700 | Msa1133220 | 0.806420 | 8.298589e-50 | -8.615850e-47 |
| Msa0312530 | Msa1133220 | 0.826599 | 2.483495e-54 | -8.615850e-47 |
| Msa0317270 | Msa1133220 | 0.843172 | 1.649492e-58 | -8.615850e-47 |
| Msa0327750 | Msa1133220 | 0.804181 | 2.443643e-49 | -8.615850e-47 |
| Msa0330390 | Msa1133220 | 0.801717 | 7.894420e-49 | -8.615850e-47 |
| Msa1118760 | Msa1133220 | 0.819248 | 1.283299e-52 | -8.615850e-47 |
| Msa1127770 | Msa1133220 | 0.850616 | 1.513657e-60 | -8.615850e-47 |
| Msa1133220 | Msa1156340 | -0.804316 | 2.290756e-49 | -8.615850e-47 |
| Msa1133220 | Msa1158310 | 0.827002 | 1.989389e-54 | -8.615850e-47 |
| Msa1133220 | Msa1158660 | 0.804195 | 2.427472e-49 | -8.615850e-47 |
| Msa1133220 | Msa1158810 | 0.800472 | 1.418540e-48 | -8.615850e-47 |
| Msa1133220 | Msa1164170 | -0.828779 | 7.434959e-55 | -8.615850e-47 |
| Msa1133220 | Msa1204100 | -0.806790 | 6.930621e-50 | -8.615850e-47 |
| Msa1133220 | Msa1227330 | 0.814025 | 1.900876e-51 | -8.615850e-47 |
| Msa1133220 | Msa1236240 | 0.807530 | 4.831585e-50 | -8.615850e-47 |
| Msa1133220 | Msa1302060 | 0.810552 | 1.089184e-50 | -8.615850e-47 |
| Msa1133220 | Msa1317580 | 0.803712 | 3.057866e-49 | -8.615850e-47 |
| Msa1133220 | Msa1319820 | 0.811512 | 6.745149e-51 | -8.615850e-47 |
| Msa1133220 | Msa1329050 | -0.806049 | 9.935442e-50 | -8.615850e-47 |
| Msa1133220 | Msa1359920 | 0.817922 | 2.565233e-52 | -8.615850e-47 |
| Msa1133220 | Msa1379590 | 0.842756 | 2.129625e-58 | -8.615850e-47 |
| Msa1133220 | Msa1379850 | 0.845152 | 4.852314e-59 | -8.615850e-47 |
| Msa1133220 | Msa1393410 | 0.808590 | 2.873768e-50 | -8.615850e-47 |
| Msa1133220 | Msa1396780 | 0.867185 | 1.648451e-65 | -8.615850e-47 |
| Msa1133220 | Msa1401270 | 0.833400 | 5.449714e-56 | -8.615850e-47 |
| Msa1133220 | Msa1404540 | 0.802877 | 4.553293e-49 | -8.615850e-47 |
| Msa1133220 | Msa1408620 | -0.824404 | 8.221595e-54 | -8.615850e-47 |
| Msa1133220 | Msa1410210 | 0.817694 | 2.886748e-52 | -8.615850e-47 |
| Msa1133220 | Msa1418260 | 0.804095 | 2.545803e-49 | -8.615850e-47 |
| Msa1133220 | Msa1420250 | 0.811205 | 7.865926e-51 | -8.615850e-47 |
| Msa1133220 | Msa1424640 | 0.841544 | 4.455991e-58 | -8.615850e-47 |
| Msa1133220 | Msa1431060 | 0.816332 | 5.840013e-52 | -8.615850e-47 |
| Msa1133220 | Msa1433220 | 0.802610 | 5.169388e-49 | -8.615850e-47 |
| Msa1133220 | Msa1435420 | 0.808866 | 2.509468e-50 | -8.615850e-47 |
| Msa1133220 | Msa1440740 | 0.813293 | 2.754301e-51 | -8.615850e-47 |
| Msa1133220 | Msa1447150 | 0.806225 | 9.121579e-50 | -8.615850e-47 |
| Msa1133220 | Msa1457430 | 0.827361 | 1.632694e-54 | -8.615850e-47 |
| Msa1133220 | Msa1465750 | 0.811706 | 6.121663e-51 | -8.615850e-47 |
| Msa0492880 | Msa1133220 | 0.808377 | 3.191031e-50 | -8.615850e-47 |
| Msa0511250 | Msa1133220 | 0.820733 | 5.869394e-53 | -8.615850e-47 |
| Msa0516370 | Msa1133220 | 0.808628 | 2.820482e-50 | -8.615850e-47 |
| Msa0526940 | Msa1133220 | 0.842274 | 2.858742e-58 | -8.615850e-47 |
| Msa0559500 | Msa1133220 | 0.802659 | 5.051082e-49 | -8.615850e-47 |
| Msa0572420 | Msa1133220 | 0.825293 | 5.072417e-54 | -8.615850e-47 |
| Msa0572480 | Msa1133220 | 0.837507 | 4.989340e-57 | -8.615850e-47 |
| Msa0574760 | Msa1133220 | -0.801452 | 8.946154e-49 | -8.615850e-47 |
| Msa0579660 | Msa1133220 | 0.800334 | 1.513139e-48 | -8.615850e-47 |
| Msa0581050 | Msa1133220 | 0.822202 | 2.687510e-53 | -8.615850e-47 |
| Msa0861530 | Msa1133220 | 0.805036 | 1.620648e-49 | -8.615850e-47 |
| Msa0870530 | Msa1133220 | 0.848644 | 5.374850e-60 | -8.615850e-47 |
| Msa0900620 | Msa1133220 | 0.809289 | 2.036434e-50 | -8.615850e-47 |
| Msa0900710 | Msa1133220 | 0.803628 | 3.183855e-49 | -8.615850e-47 |
| Msa0903700 | Msa1133220 | 0.832614 | 8.550964e-56 | -8.615850e-47 |
| Msa0926370 | Msa1133220 | 0.807848 | 4.135366e-50 | -8.615850e-47 |
| Msa0936210 | Msa1133220 | 0.848545 | 5.725569e-60 | -8.615850e-47 |
| Msa0973150 | Msa1133220 | 0.827404 | 1.594037e-54 | -8.615850e-47 |
| Msa0974060 | Msa1133220 | 0.805027 | 1.627301e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133220 | MtrunA17_Chr2g0334131 | 99.043 | 209 | 2 | 0 | 1 | 209 | 78 | 286 | 7.15e-153 | 425 |
| Msa1133220 | MtrunA17_Chr4g0000461 | 85.167 | 209 | 31 | 0 | 1 | 209 | 336 | 544 | 2.09e-119 | 349 |
| Msa1133220 | MtrunA17_Chr5g0395431 | 73.892 | 203 | 52 | 1 | 1 | 203 | 382 | 583 | 1.54e-108 | 323 |
| Msa1133220 | MtrunA17_Chr4g0072561 | 77.295 | 207 | 45 | 2 | 1 | 207 | 344 | 548 | 2.96e-104 | 311 |
| Msa1133220 | MtrunA17_Chr4g0028411 | 55.135 | 185 | 82 | 1 | 23 | 207 | 359 | 542 | 7.60e-69 | 219 |
| Msa1133220 | MtrunA17_Chr3g0102411 | 53.631 | 179 | 82 | 1 | 25 | 203 | 360 | 537 | 5.58e-67 | 214 |
| Msa1133220 | MtrunA17_Chr1g0157401 | 57.865 | 178 | 74 | 1 | 22 | 199 | 376 | 552 | 3.87e-66 | 213 |
| Msa1133220 | MtrunA17_Chr1g0180551 | 58.427 | 178 | 73 | 1 | 22 | 199 | 437 | 613 | 8.25e-66 | 213 |
| Msa1133220 | MtrunA17_Chr2g0327341 | 57.062 | 177 | 75 | 1 | 23 | 199 | 356 | 531 | 1.03e-65 | 211 |
| Msa1133220 | MtrunA17_Chr3g0116271 | 55.618 | 178 | 78 | 1 | 22 | 199 | 374 | 550 | 1.15e-63 | 206 |
| Msa1133220 | MtrunA17_Chr1g0197391 | 55.429 | 175 | 77 | 1 | 25 | 199 | 385 | 558 | 1.24e-62 | 204 |
| Msa1133220 | MtrunA17_Chr1g0180541 | 54.802 | 177 | 79 | 1 | 23 | 199 | 365 | 540 | 4.44e-62 | 202 |
| Msa1133220 | MtrunA17_Chr3g0116251 | 54.494 | 178 | 80 | 1 | 22 | 199 | 372 | 548 | 2.89e-61 | 200 |
| Msa1133220 | MtrunA17_Chr4g0039791 | 52.486 | 181 | 85 | 1 | 25 | 205 | 380 | 559 | 8.47e-61 | 199 |
| Msa1133220 | MtrunA17_Chr5g0409771 | 49.756 | 205 | 99 | 3 | 1 | 205 | 353 | 553 | 2.99e-60 | 197 |
| Msa1133220 | MtrunA17_Chr5g0409791 | 50.244 | 205 | 98 | 3 | 1 | 205 | 366 | 566 | 6.03e-60 | 196 |
| Msa1133220 | MtrunA17_Chr1g0186071 | 51.648 | 182 | 86 | 2 | 22 | 203 | 373 | 552 | 1.90e-59 | 195 |
| Msa1133220 | MtrunA17_Chr8g0353341 | 53.691 | 149 | 68 | 1 | 22 | 170 | 379 | 526 | 9.99e-50 | 169 |
| Msa1133220 | MtrunA17_Chr4g0028451 | 53.704 | 108 | 40 | 2 | 64 | 171 | 10 | 107 | 1.41e-33 | 116 |
| Msa1133220 | MtrunA17_Chr6g0471921 | 36.158 | 177 | 107 | 5 | 22 | 197 | 334 | 505 | 1.29e-30 | 117 |
| Msa1133220 | MtrunA17_Chr5g0433241 | 38.764 | 178 | 101 | 4 | 30 | 200 | 365 | 541 | 3.41e-28 | 110 |
| Msa1133220 | MtrunA17_Chr5g0433231 | 36.994 | 173 | 103 | 3 | 33 | 200 | 371 | 542 | 8.94e-28 | 109 |
| Msa1133220 | MtrunA17_Chr3g0109731 | 35.385 | 195 | 117 | 3 | 16 | 202 | 356 | 549 | 9.58e-28 | 109 |
| Msa1133220 | MtrunA17_Chr5g0396311 | 37.572 | 173 | 103 | 4 | 35 | 205 | 369 | 538 | 1.79e-26 | 105 |
| Msa1133220 | MtrunA17_Chr6g0471311 | 35.838 | 173 | 105 | 4 | 33 | 200 | 373 | 544 | 2.06e-26 | 105 |
| Msa1133220 | MtrunA17_Chr5g0396331 | 36.207 | 174 | 106 | 4 | 34 | 205 | 366 | 536 | 2.28e-26 | 105 |
| Msa1133220 | MtrunA17_Chr5g0433221 | 35.838 | 173 | 105 | 4 | 33 | 200 | 371 | 542 | 2.16e-25 | 102 |
| Msa1133220 | MtrunA17_Chr8g0370701 | 37.013 | 154 | 94 | 3 | 52 | 205 | 432 | 582 | 1.06e-24 | 100 |
| Msa1133220 | MtrunA17_Chr8g0370731 | 34.375 | 192 | 121 | 4 | 16 | 205 | 305 | 493 | 1.08e-24 | 100 |
| Msa1133220 | MtrunA17_Chr2g0301671 | 37.430 | 179 | 98 | 6 | 29 | 202 | 385 | 554 | 3.78e-22 | 93.6 |
| Msa1133220 | MtrunA17_Chr4g0068151 | 35.000 | 180 | 101 | 6 | 29 | 202 | 385 | 554 | 3.60e-20 | 87.8 |
| Msa1133220 | MtrunA17_Chr4g0004841 | 25.641 | 195 | 132 | 4 | 22 | 205 | 146 | 338 | 4.28e-18 | 80.9 |
| Msa1133220 | MtrunA17_Chr3g0121951 | 29.832 | 238 | 122 | 9 | 1 | 202 | 477 | 705 | 1.32e-17 | 80.5 |
| Msa1133220 | MtrunA17_Chr4g0004101 | 25.405 | 185 | 131 | 3 | 22 | 200 | 141 | 324 | 3.78e-17 | 78.2 |
| Msa1133220 | MtrunA17_Chr8g0377991 | 29.661 | 236 | 127 | 8 | 1 | 202 | 484 | 714 | 7.59e-17 | 78.6 |
| Msa1133220 | MtrunA17_Chr7g0252691 | 30.000 | 170 | 112 | 4 | 37 | 200 | 552 | 720 | 1.70e-16 | 77.4 |
| Msa1133220 | MtrunA17_Chr3g0121931 | 27.700 | 213 | 119 | 5 | 24 | 202 | 499 | 710 | 2.77e-16 | 76.6 |
| Msa1133220 | MtrunA17_Chr5g0406681 | 31.638 | 177 | 114 | 5 | 33 | 205 | 394 | 567 | 4.11e-16 | 76.3 |
| Msa1133220 | MtrunA17_Chr1g0205711 | 41.176 | 102 | 54 | 4 | 23 | 119 | 464 | 564 | 6.32e-13 | 67.0 |
| Msa1133220 | MtrunA17_Chr2g0292471 | 27.149 | 221 | 137 | 6 | 2 | 207 | 346 | 557 | 7.71e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133220 | AT3G21240.1 | 78.261 | 207 | 44 | 1 | 1 | 207 | 349 | 554 | 2.16e-115 | 340 |
| Msa1133220 | AT1G51680.1 | 78.744 | 207 | 43 | 1 | 1 | 207 | 356 | 561 | 1.29e-105 | 315 |
| Msa1133220 | AT1G65060.1 | 72.059 | 204 | 56 | 1 | 1 | 204 | 359 | 561 | 2.60e-104 | 311 |
| Msa1133220 | AT3G21230.1 | 73.399 | 203 | 52 | 2 | 1 | 203 | 364 | 564 | 6.15e-103 | 308 |
| Msa1133220 | AT3G21230.3 | 70.330 | 182 | 48 | 3 | 1 | 182 | 364 | 539 | 8.34e-85 | 261 |
| Msa1133220 | AT1G51680.3 | 78.363 | 171 | 36 | 1 | 1 | 171 | 356 | 525 | 1.86e-82 | 254 |
| Msa1133220 | AT3G21240.2 | 81.343 | 134 | 25 | 0 | 1 | 134 | 349 | 482 | 5.02e-75 | 234 |
| Msa1133220 | AT3G21240.3 | 81.343 | 134 | 25 | 0 | 1 | 134 | 349 | 482 | 5.02e-75 | 234 |
| Msa1133220 | AT3G21230.2 | 76.119 | 134 | 31 | 1 | 1 | 134 | 364 | 496 | 1.06e-68 | 218 |
| Msa1133220 | AT4G05160.1 | 57.865 | 178 | 74 | 1 | 22 | 199 | 360 | 536 | 4.91e-68 | 218 |
| Msa1133220 | AT1G20510.1 | 57.303 | 178 | 75 | 1 | 22 | 199 | 360 | 536 | 3.41e-67 | 215 |
| Msa1133220 | AT1G20480.1 | 55.612 | 196 | 82 | 2 | 8 | 199 | 363 | 557 | 7.87e-67 | 215 |
| Msa1133220 | AT1G51680.2 | 82.836 | 134 | 23 | 0 | 1 | 134 | 356 | 489 | 7.88e-66 | 210 |
| Msa1133220 | AT5G63380.1 | 55.866 | 179 | 78 | 1 | 21 | 199 | 373 | 550 | 3.30e-65 | 211 |
| Msa1133220 | AT1G20500.1 | 56.180 | 178 | 77 | 1 | 22 | 199 | 366 | 542 | 1.06e-64 | 209 |
| Msa1133220 | AT1G62940.1 | 56.044 | 182 | 79 | 1 | 22 | 203 | 356 | 536 | 5.29e-61 | 199 |
| Msa1133220 | AT5G38120.1 | 55.618 | 178 | 75 | 2 | 22 | 199 | 369 | 542 | 1.99e-59 | 195 |
| Msa1133220 | AT4G19010.1 | 47.343 | 207 | 105 | 3 | 1 | 207 | 360 | 562 | 4.57e-58 | 192 |
| Msa1133220 | AT1G65060.2 | 73.913 | 115 | 30 | 0 | 1 | 115 | 359 | 473 | 5.11e-56 | 185 |
| Msa1133220 | AT5G38120.3 | 52.980 | 151 | 67 | 2 | 22 | 172 | 369 | 515 | 1.81e-45 | 157 |
| Msa1133220 | AT1G20510.2 | 60.526 | 114 | 45 | 0 | 22 | 135 | 360 | 473 | 7.19e-43 | 150 |
| Msa1133220 | AT5G38120.4 | 57.895 | 114 | 45 | 1 | 22 | 135 | 369 | 479 | 6.01e-37 | 134 |
| Msa1133220 | AT5G38120.2 | 57.895 | 114 | 45 | 1 | 22 | 135 | 369 | 479 | 6.01e-37 | 134 |
| Msa1133220 | AT5G16340.1 | 40.351 | 171 | 98 | 3 | 33 | 200 | 369 | 538 | 1.93e-32 | 123 |
| Msa1133220 | AT3G48990.1 | 39.773 | 176 | 102 | 4 | 22 | 197 | 333 | 504 | 2.23e-32 | 122 |
| Msa1133220 | AT5G16370.1 | 39.766 | 171 | 99 | 3 | 33 | 200 | 369 | 538 | 1.84e-31 | 120 |
| Msa1133220 | AT1G21540.1 | 37.569 | 181 | 107 | 3 | 33 | 208 | 371 | 550 | 2.18e-30 | 117 |
| Msa1133220 | AT1G77240.1 | 37.079 | 178 | 109 | 2 | 33 | 208 | 369 | 545 | 2.75e-30 | 117 |
| Msa1133220 | AT1G68270.1 | 38.122 | 181 | 98 | 5 | 33 | 201 | 342 | 520 | 3.47e-29 | 114 |
| Msa1133220 | AT1G75960.1 | 38.596 | 171 | 101 | 3 | 33 | 200 | 369 | 538 | 3.71e-29 | 114 |
| Msa1133220 | AT1G20510.3 | 55.435 | 92 | 41 | 0 | 22 | 113 | 360 | 451 | 1.35e-28 | 111 |
| Msa1133220 | AT1G65880.1 | 37.222 | 180 | 100 | 4 | 33 | 200 | 372 | 550 | 9.07e-28 | 110 |
| Msa1133220 | AT1G21530.1 | 36.000 | 175 | 105 | 2 | 33 | 200 | 366 | 540 | 2.82e-27 | 108 |
| Msa1133220 | AT1G21530.2 | 36.000 | 175 | 105 | 2 | 33 | 200 | 368 | 542 | 3.04e-27 | 108 |
| Msa1133220 | AT1G65890.1 | 34.703 | 219 | 122 | 8 | 1 | 200 | 333 | 549 | 1.27e-26 | 107 |
| Msa1133220 | AT1G66120.1 | 36.517 | 178 | 105 | 4 | 30 | 200 | 366 | 542 | 3.00e-24 | 100 |
| Msa1133220 | AT1G20560.2 | 33.523 | 176 | 112 | 4 | 34 | 207 | 296 | 468 | 1.56e-23 | 97.8 |
| Msa1133220 | AT1G20560.1 | 33.523 | 176 | 112 | 4 | 34 | 207 | 374 | 546 | 1.83e-23 | 97.8 |
| Msa1133220 | AT3G21230.4 | 70.312 | 64 | 18 | 1 | 1 | 64 | 364 | 426 | 2.96e-23 | 96.7 |
| Msa1133220 | AT3G16910.1 | 34.659 | 176 | 105 | 5 | 34 | 202 | 385 | 557 | 6.33e-23 | 96.3 |
| Msa1133220 | AT1G76290.1 | 36.047 | 172 | 103 | 5 | 37 | 204 | 366 | 534 | 2.24e-21 | 91.7 |
| Msa1133220 | AT2G17650.1 | 32.353 | 170 | 111 | 3 | 35 | 202 | 429 | 596 | 2.47e-21 | 91.7 |
| Msa1133220 | AT3G16170.1 | 26.562 | 192 | 127 | 3 | 22 | 203 | 417 | 604 | 1.42e-18 | 84.0 |
| Msa1133220 | AT5G36880.6 | 28.235 | 170 | 115 | 4 | 37 | 200 | 494 | 662 | 1.70e-15 | 74.7 |
| Msa1133220 | AT5G36880.3 | 28.235 | 170 | 115 | 4 | 37 | 200 | 494 | 662 | 1.70e-15 | 74.7 |
| Msa1133220 | AT5G36880.5 | 28.235 | 170 | 115 | 4 | 37 | 200 | 494 | 662 | 1.70e-15 | 74.7 |
| Msa1133220 | AT5G36880.1 | 28.235 | 170 | 115 | 4 | 37 | 200 | 494 | 662 | 1.70e-15 | 74.7 |
| Msa1133220 | AT5G36880.2 | 28.235 | 170 | 115 | 4 | 37 | 200 | 544 | 712 | 1.77e-15 | 74.7 |
| Msa1133220 | AT1G30520.2 | 31.176 | 170 | 99 | 4 | 52 | 203 | 380 | 549 | 3.84e-14 | 70.9 |
| Msa1133220 | AT1G30520.1 | 31.176 | 170 | 99 | 4 | 52 | 203 | 380 | 549 | 3.84e-14 | 70.9 |
| Msa1133220 | AT1G20490.2 | 47.619 | 63 | 33 | 0 | 20 | 82 | 366 | 428 | 9.71e-13 | 66.6 |
| Msa1133220 | AT1G20490.1 | 47.619 | 63 | 33 | 0 | 20 | 82 | 366 | 428 | 9.71e-13 | 66.6 |
| Msa1133220 | AT5G27600.1 | 39.423 | 104 | 53 | 4 | 23 | 119 | 467 | 567 | 1.63e-12 | 66.2 |
| Msa1133220 | AT3G23790.1 | 38.889 | 90 | 50 | 2 | 1 | 90 | 482 | 566 | 1.66e-12 | 66.2 |
| Msa1133220 | AT4G14070.1 | 38.710 | 93 | 46 | 3 | 1 | 90 | 498 | 582 | 2.19e-12 | 65.9 |
| Msa1133220 | AT3G05970.1 | 37.624 | 101 | 59 | 2 | 23 | 119 | 467 | 567 | 3.46e-11 | 62.4 |
Find 58 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGCAGCATCAGAAATTT+TGG | 0.154865 | 7_3:+86367549 | None:intergenic |
| CCTCGTTTAAATATAATAAA+TGG | 0.182088 | 7_3:-86369341 | Msa1133220:five_prime_UTR |
| TACACAACAAACGTGTAAAA+TGG | 0.182507 | 7_3:-86366850 | Msa1133220:three_prime_UTR |
| CAACCAACCTTCTTTGTCTA+TGG | 0.233625 | 7_3:+86367702 | None:intergenic |
| TCTCCATTGTGGATGCTCTT+AGG | 0.238345 | 7_3:-86369523 | None:intergenic |
| ACGTCCATAAGCGGAAAATT+TGG | 0.253221 | 7_3:-86366667 | Msa1133220:three_prime_UTR |
| CGTCCATAAGCGGAAAATTT+GGG | 0.273990 | 7_3:-86366666 | Msa1133220:three_prime_UTR |
| GTCCCAACACATAATGTTAT+TGG | 0.276986 | 7_3:-86366631 | Msa1133220:three_prime_UTR |
| ATACATCACCTTTCATGATT+TGG | 0.282523 | 7_3:+86369123 | None:intergenic |
| TATAATAAATGGAACATTAC+AGG | 0.308020 | 7_3:-86369330 | Msa1133220:five_prime_UTR |
| TGGTTGTATACAGGTGATAT+TGG | 0.318824 | 7_3:-86367685 | Msa1133220:CDS |
| AATTATTAAATTGTGTCTTA+AGG | 0.328795 | 7_3:-86369381 | Msa1133220:five_prime_UTR |
| CTTGTAACTTATACATGATA+TGG | 0.333790 | 7_3:+86366781 | None:intergenic |
| CTCCATTGTGGATGCTCTTA+GGG | 0.352955 | 7_3:-86369522 | None:intergenic |
| GGTTGTATACAGGTGATATT+GGG | 0.389319 | 7_3:-86367684 | Msa1133220:CDS |
| TACCAATAACATTATGTGTT+GGG | 0.410928 | 7_3:+86366629 | None:intergenic |
| AGAGGTACCTGTTGCATTTG+TGG | 0.414419 | 7_3:-86367375 | Msa1133220:CDS |
| CATTTATTCAATACTTCATC+CGG | 0.419817 | 7_3:-86369484 | Msa1133220:five_prime_UTR |
| TAAGCACTTTATCTCCAAAC+AGG | 0.437851 | 7_3:-86367312 | Msa1133220:intron |
| TTATGCAGATTTCACCAGAT+TGG | 0.438572 | 7_3:+86369153 | None:intergenic |
| ATTCATTGTTGATAGATTGA+AGG | 0.440963 | 7_3:-86367638 | Msa1133220:CDS |
| ACACAACAAACGTGTAAAAT+GGG | 0.457086 | 7_3:-86366849 | Msa1133220:three_prime_UTR |
| AGAAGAGCTTCAAGTTCAGC+TGG | 0.466302 | 7_3:+86367583 | None:intergenic |
| TCTTTACCTCGAAACCAATC+TGG | 0.470219 | 7_3:-86369167 | Msa1133220:CDS |
| GGTAAAGATTTACCAGTGTC+AGG | 0.475114 | 7_3:+86369182 | None:intergenic |
| TCTGGTGAAATCTGCATAAG+AGG | 0.475587 | 7_3:-86369149 | Msa1133220:CDS |
| GCAATTCCCAAGTCACCATC+AGG | 0.482425 | 7_3:-86366937 | Msa1133220:CDS |
| ATTTCACCAGATTGGTTTCG+AGG | 0.484356 | 7_3:+86369161 | None:intergenic |
| GCATTTGTGGTGAGATCAAA+TGG | 0.485996 | 7_3:-86367362 | Msa1133220:CDS |
| GATCTCACCACAAATGCAAC+AGG | 0.486516 | 7_3:+86367368 | None:intergenic |
| AAAGAAGGTTGGTTGTATAC+AGG | 0.501330 | 7_3:-86367694 | Msa1133220:CDS |
| GGATACGGAATGACTGAGGC+GGG | 0.504464 | 7_3:-86369308 | Msa1133220:exon |
| TTGAGAGCAAAGCTAGCAGC+AGG | 0.532670 | 7_3:-86366895 | Msa1133220:CDS |
| TTACCAATAACATTATGTGT+TGG | 0.535138 | 7_3:+86366628 | None:intergenic |
| AATGGAACATTACAGGGATA+CGG | 0.543669 | 7_3:-86369323 | Msa1133220:five_prime_UTR |
| GAAGGATGAAGCGGCTGGAG+AGG | 0.557352 | 7_3:-86367393 | Msa1133220:CDS |
| AAATGCAGAGATGAAGATTG+TGG | 0.577117 | 7_3:-86369207 | Msa1133220:CDS |
| GAACCAGTGAATGTAAAAGC+AGG | 0.579482 | 7_3:-86369251 | Msa1133220:CDS |
| GAGAGAACCATAGACAAAGA+AGG | 0.579648 | 7_3:-86367709 | Msa1133220:CDS |
| AACATTATGTGTTGGGACGG+AGG | 0.582608 | 7_3:+86366636 | None:intergenic |
| AGAATGAAGGATGAAGCGGC+TGG | 0.583246 | 7_3:-86367398 | Msa1133220:CDS |
| ATCAGGCAAAATCTTGCGCA+AGG | 0.592909 | 7_3:-86366920 | Msa1133220:CDS |
| GTCCATAAGCGGAAAATTTG+GGG | 0.597127 | 7_3:-86366665 | Msa1133220:three_prime_UTR |
| AAGGAATTAATCAAATACAA+AGG | 0.598333 | 7_3:-86367619 | Msa1133220:CDS |
| CCATTTATTATATTTAAACG+AGG | 0.598539 | 7_3:+86369341 | None:intergenic |
| TCATATTATACGTCCATAAG+CGG | 0.604571 | 7_3:-86366676 | Msa1133220:three_prime_UTR |
| AAGATTGTGGATCCTGACAC+TGG | 0.615148 | 7_3:-86369194 | Msa1133220:CDS |
| ATAATAAATGGAACATTACA+GGG | 0.616569 | 7_3:-86369329 | Msa1133220:five_prime_UTR |
| AATAACATTATGTGTTGGGA+CGG | 0.617150 | 7_3:+86366633 | None:intergenic |
| GAACCATAGACAAAGAAGGT+TGG | 0.619000 | 7_3:-86367705 | Msa1133220:CDS |
| AATGTAAAAGCAGGTGCATG+TGG | 0.625412 | 7_3:-86369242 | Msa1133220:CDS |
| AGAGGCGACCAAATCATGAA+AGG | 0.629028 | 7_3:-86369131 | Msa1133220:intron |
| GCTAAACTCATCGTTAACAC+TGG | 0.639259 | 7_3:+86369284 | None:intergenic |
| GGGATACGGAATGACTGAGG+CGG | 0.641098 | 7_3:-86369309 | Msa1133220:exon |
| GATACGGAATGACTGAGGCG+GGG | 0.645430 | 7_3:-86369307 | Msa1133220:exon |
| TGTAAAATGGGAGATTCATG+TGG | 0.666874 | 7_3:-86366837 | Msa1133220:three_prime_UTR |
| AGGTTATCTAAATGATCGAG+AGG | 0.669178 | 7_3:-86367737 | Msa1133220:CDS |
| ACAGGGATACGGAATGACTG+AGG | 0.707818 | 7_3:-86369312 | Msa1133220:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTAAGTAAAGTATATT+AGG | + | chr7_3:86367155-86367174 | None:intergenic | 10.0% |
| !! | TTGTAAAATATAATTAATAC+AGG | + | chr7_3:86367818-86367837 | None:intergenic | 10.0% |
| !! | AATTGAATTAATAATATGAA+TGG | + | chr7_3:86368609-86368628 | None:intergenic | 10.0% |
| !!! | AAATTTAAATTTTAGAATGA+AGG | - | chr7_3:86368683-86368702 | Msa1133220:intron | 10.0% |
| !!! | TTTTTTTTTATAATAGTGAC+CGG | + | chr7_3:86366632-86366651 | None:intergenic | 15.0% |
| !! | AATTATTAAATTGTGTCTTA+AGG | - | chr7_3:86366713-86366732 | Msa1133220:three_prime_UTR | 15.0% |
| !!! | TTAATCTCGTTTTTAATAAT+AGG | - | chr7_3:86367094-86367113 | Msa1133220:intron | 15.0% |
| !! | GAAAAACAAACTATATAAAA+TGG | - | chr7_3:86367534-86367553 | Msa1133220:intron | 15.0% |
| !!! | CAAAAAATAGATTTTTTTAC+AGG | + | chr7_3:86367598-86367617 | None:intergenic | 15.0% |
| !!! | ATTTTCATGTAAAAGTTAAA+AGG | + | chr7_3:86368819-86368838 | None:intergenic | 15.0% |
| !!! | ACATGAAAATACATAATTTT+TGG | - | chr7_3:86368829-86368848 | Msa1133220:intron | 15.0% |
| !!! | CATGAAAATACATAATTTTT+GGG | - | chr7_3:86368830-86368849 | Msa1133220:intron | 15.0% |
| !! | GGAAAAATTGATTAAATATA+AGG | - | chr7_3:86368919-86368938 | Msa1133220:intron | 15.0% |
| !! | CAAATTAATGTTAATAATTG+AGG | - | chr7_3:86369071-86369090 | Msa1133220:intron | 15.0% |
| !!! | ACTTATACATTTTTTTTTGA+AGG | + | chr7_3:86369341-86369360 | None:intergenic | 15.0% |
| !! | CCATTTATTATATTTAAACG+AGG | + | chr7_3:86366756-86366775 | None:intergenic | 20.0% |
| !! | CCTCGTTTAAATATAATAAA+TGG | - | chr7_3:86366753-86366772 | Msa1133220:three_prime_UTR | 20.0% |
| !! | TATAATAAATGGAACATTAC+AGG | - | chr7_3:86366764-86366783 | Msa1133220:three_prime_UTR | 20.0% |
| !! | ATAATAAATGGAACATTACA+GGG | - | chr7_3:86366765-86366784 | Msa1133220:three_prime_UTR | 20.0% |
| !! | AAATGATTAAATTTGGAAAG+TGG | + | chr7_3:86367024-86367043 | None:intergenic | 20.0% |
| !! | AAGAAGGAAATGATTAAATT+TGG | + | chr7_3:86367031-86367050 | None:intergenic | 20.0% |
| !!! | TCGTTTTTAATAATAGGAAA+AGG | - | chr7_3:86367100-86367119 | Msa1133220:intron | 20.0% |
| !!! | CGTTTTTAATAATAGGAAAA+GGG | - | chr7_3:86367101-86367120 | Msa1133220:intron | 20.0% |
| !!! | GTTTTTAATAATAGGAAAAG+GGG | - | chr7_3:86367102-86367121 | Msa1133220:intron | 20.0% |
| !! | TTTGGATGAGATAATTTAAA+AGG | + | chr7_3:86367318-86367337 | None:intergenic | 20.0% |
| !! | TTAAATTATCTCATCCAAAT+TGG | - | chr7_3:86367319-86367338 | Msa1133220:CDS | 20.0% |
| !! | GAGTAAAAATTGACTAAATT+AGG | - | chr7_3:86367455-86367474 | Msa1133220:intron | 20.0% |
| !!! | ATAGTTTGTTTTTCTTCAAA+AGG | + | chr7_3:86367528-86367547 | None:intergenic | 20.0% |
| !! | CTTAAAAAAGCTATAACAAA+CGG | - | chr7_3:86367748-86367767 | Msa1133220:intron | 20.0% |
| !! | ATTAAATAATGAAATGATGC+AGG | - | chr7_3:86368337-86368356 | Msa1133220:intron | 20.0% |
| !! | AAGGAATTAATCAAATACAA+AGG | - | chr7_3:86368475-86368494 | Msa1133220:intron | 20.0% |
| !! | TAACAAAACAAAAAGTTAGT+AGG | - | chr7_3:86368898-86368917 | Msa1133220:intron | 20.0% |
| ! | CATTTATTCAATACTTCATC+CGG | - | chr7_3:86366610-86366629 | Msa1133220:three_prime_UTR | 25.0% |
| ! | AATGTACTTTAAATCCACTT+GGG | + | chr7_3:86367404-86367423 | None:intergenic | 25.0% |
| ! | AAATGTACTTTAAATCCACT+TGG | + | chr7_3:86367405-86367424 | None:intergenic | 25.0% |
| !! | TCAATTTTTACTCGTTCTAA+AGG | + | chr7_3:86367448-86367467 | None:intergenic | 25.0% |
| !!! | TCAAAAGGTGTTTATAAAAG+AGG | + | chr7_3:86367513-86367532 | None:intergenic | 25.0% |
| !!! | AAAGCCTTATTTATACCTTT+GGG | + | chr7_3:86367783-86367802 | None:intergenic | 25.0% |
| !! | ATTATATTTTACAACTGCTC+TGG | - | chr7_3:86367824-86367843 | Msa1133220:intron | 25.0% |
| !!! | CTTTGAAATATTGGAAACAA+AGG | - | chr7_3:86367902-86367921 | Msa1133220:intron | 25.0% |
| ! | TTAGCCAATTTGGATAAATT+AGG | - | chr7_3:86367953-86367972 | Msa1133220:intron | 25.0% |
| !!! | ATGACACAAGAAGTATTTAA+GGG | - | chr7_3:86368068-86368087 | Msa1133220:intron | 25.0% |
| ! | GTTATTACATTACATGAAAG+TGG | + | chr7_3:86368216-86368235 | None:intergenic | 25.0% |
| !!! | GTGTCTACATACATTTTTTT+TGG | + | chr7_3:86368238-86368257 | None:intergenic | 25.0% |
| !! | ATTCATTGTTGATAGATTGA+AGG | - | chr7_3:86368456-86368475 | Msa1133220:intron | 25.0% |
| ! | ATAAGAAAAGACTAGACTTA+CGG | + | chr7_3:86368574-86368593 | None:intergenic | 25.0% |
| !!! | GAAAATACATAATTTTTGGG+AGG | - | chr7_3:86368833-86368852 | Msa1133220:intron | 25.0% |
| !! | GAGAAGTACATACATAAATT+AGG | + | chr7_3:86369000-86369019 | None:intergenic | 25.0% |
| !! | ATGTTAATAATTGAGGTGTT+TGG | - | chr7_3:86369078-86369097 | Msa1133220:intron | 25.0% |
| !! | TGTTAATAATTGAGGTGTTT+GGG | - | chr7_3:86369079-86369098 | Msa1133220:intron | 25.0% |
| ! | CTTGTAACTTATACATGATA+TGG | + | chr7_3:86369316-86369335 | None:intergenic | 25.0% |
| ! | TACCAATAACATTATGTGTT+GGG | + | chr7_3:86369468-86369487 | None:intergenic | 25.0% |
| ! | TTACCAATAACATTATGTGT+TGG | + | chr7_3:86369469-86369488 | None:intergenic | 25.0% |
| ATACATCACCTTTCATGATT+TGG | + | chr7_3:86366974-86366993 | None:intergenic | 30.0% | |
| ATGTGCATAATGTTTGACAA+CGG | - | chr7_3:86367264-86367283 | Msa1133220:intron | 30.0% | |
| GTTTATAAAAGAGGCGAAAT+GGG | + | chr7_3:86367504-86367523 | None:intergenic | 30.0% | |
| TGTTTATAAAAGAGGCGAAA+TGG | + | chr7_3:86367505-86367524 | None:intergenic | 30.0% | |
| ! | AAGTCCCAAAGGTATAAATA+AGG | - | chr7_3:86367776-86367795 | Msa1133220:intron | 30.0% |
| !! | GAAAGCCTTATTTATACCTT+TGG | + | chr7_3:86367784-86367803 | None:intergenic | 30.0% |
| ! | AATATTTCAAAGTGCTAGCT+TGG | + | chr7_3:86367894-86367913 | None:intergenic | 30.0% |
| !! | AAGCTAGCACTTTGAAATAT+TGG | - | chr7_3:86367893-86367912 | Msa1133220:intron | 30.0% |
| ! | GAAACAAAGGTTCTTTTTAG+AGG | - | chr7_3:86367915-86367934 | Msa1133220:intron | 30.0% |
| TGTGCCTAATTTATCCAAAT+TGG | + | chr7_3:86367960-86367979 | None:intergenic | 30.0% | |
| !! | CATGACACAAGAAGTATTTA+AGG | - | chr7_3:86368067-86368086 | Msa1133220:intron | 30.0% |
| AACTACACGCTTTCAATATT+CGG | + | chr7_3:86368097-86368116 | None:intergenic | 30.0% | |
| CATGAAATGATTGATTGCAA+AGG | - | chr7_3:86368131-86368150 | Msa1133220:intron | 30.0% | |
| AAATGATTGATTGCAAAGGT+AGG | - | chr7_3:86368135-86368154 | Msa1133220:intron | 30.0% | |
| TAAGAAAAGACTAGACTTAC+GGG | + | chr7_3:86368573-86368592 | None:intergenic | 30.0% | |
| !!! | TTTTAGAATGAAGGATGAAG+CGG | - | chr7_3:86368692-86368711 | Msa1133220:intron | 30.0% |
| !! | TACATAATTTTTGGGAGGTA+AGG | - | chr7_3:86368838-86368857 | Msa1133220:intron | 30.0% |
| ACATAAATTAGGTGACAAGT+AGG | + | chr7_3:86368989-86369008 | None:intergenic | 30.0% | |
| !!! | ATTTTACACGTTTGTTGTGT+AGG | + | chr7_3:86369245-86369264 | None:intergenic | 30.0% |
| TACACAACAAACGTGTAAAA+TGG | - | chr7_3:86369244-86369263 | Msa1133220:CDS | 30.0% | |
| ACACAACAAACGTGTAAAAT+GGG | - | chr7_3:86369245-86369264 | Msa1133220:CDS | 30.0% | |
| TCATATTATACGTCCATAAG+CGG | - | chr7_3:86369418-86369437 | Msa1133220:five_prime_UTR | 30.0% | |
| AATAACATTATGTGTTGGGA+CGG | + | chr7_3:86369464-86369483 | None:intergenic | 30.0% | |
| AATGGAACATTACAGGGATA+CGG | - | chr7_3:86366771-86366790 | Msa1133220:three_prime_UTR | 35.0% | |
| AAATGCAGAGATGAAGATTG+TGG | - | chr7_3:86366887-86366906 | Msa1133220:CDS | 35.0% | |
| TTATGCAGATTTCACCAGAT+TGG | + | chr7_3:86366944-86366963 | None:intergenic | 35.0% | |
| CAACGGTATATATGAGAATG+AGG | - | chr7_3:86367281-86367300 | Msa1133220:intron | 35.0% | |
| ATAAATAAGGCTTTCGCTGA+CGG | - | chr7_3:86367789-86367808 | Msa1133220:intron | 35.0% | |
| ! | GAAATCAAGGTTAGCCAATT+TGG | - | chr7_3:86367943-86367962 | Msa1133220:intron | 35.0% |
| AGGTTATCTAAATGATCGAG+AGG | - | chr7_3:86368357-86368376 | Msa1133220:intron | 35.0% | |
| ! | AAAGAAGGTTGGTTGTATAC+AGG | - | chr7_3:86368400-86368419 | Msa1133220:intron | 35.0% |
| TGGTTGTATACAGGTGATAT+TGG | - | chr7_3:86368409-86368428 | Msa1133220:intron | 35.0% | |
| GGTTGTATACAGGTGATATT+GGG | - | chr7_3:86368410-86368429 | Msa1133220:intron | 35.0% | |
| ! | ACAGCAGCATCAGAAATTTT+GGG | + | chr7_3:86368547-86368566 | None:intergenic | 35.0% |
| ! | AACAGCAGCATCAGAAATTT+TGG | + | chr7_3:86368548-86368567 | None:intergenic | 35.0% |
| TATGCATATGCATGCATGAA+TGG | + | chr7_3:86368664-86368683 | None:intergenic | 35.0% | |
| TAAGCACTTTATCTCCAAAC+AGG | - | chr7_3:86368782-86368801 | Msa1133220:intron | 35.0% | |
| AGGAAGAAAAAGAACCTGTT+TGG | + | chr7_3:86368799-86368818 | None:intergenic | 35.0% | |
| TGTGAGTTAAGATCTTAGAG+CGG | - | chr7_3:86368951-86368970 | Msa1133220:intron | 35.0% | |
| ATACCTCACACACAACATTT+AGG | + | chr7_3:86369024-86369043 | None:intergenic | 35.0% | |
| ! | GTGTTTGGGTTTGATATTAC+AGG | - | chr7_3:86369093-86369112 | Msa1133220:intron | 35.0% |
| ! | TTTGGGTTTGATATTACAGG+TGG | - | chr7_3:86369096-86369115 | Msa1133220:intron | 35.0% |
| ! | GTGTAGGAACATTTTCAATG+TGG | + | chr7_3:86369229-86369248 | None:intergenic | 35.0% |
| TGTAAAATGGGAGATTCATG+TGG | - | chr7_3:86369257-86369276 | Msa1133220:CDS | 35.0% | |
| GTCCCAACACATAATGTTAT+TGG | - | chr7_3:86369463-86369482 | Msa1133220:five_prime_UTR | 35.0% | |
| GCTAAACTCATCGTTAACAC+TGG | + | chr7_3:86366813-86366832 | None:intergenic | 40.0% | |
| GAACCAGTGAATGTAAAAGC+AGG | - | chr7_3:86366843-86366862 | Msa1133220:three_prime_UTR | 40.0% | |
| AATGTAAAAGCAGGTGCATG+TGG | - | chr7_3:86366852-86366871 | Msa1133220:three_prime_UTR | 40.0% | |
| GGTAAAGATTTACCAGTGTC+AGG | + | chr7_3:86366915-86366934 | None:intergenic | 40.0% | |
| TCTTTACCTCGAAACCAATC+TGG | - | chr7_3:86366927-86366946 | Msa1133220:CDS | 40.0% | |
| !! | ATTTCACCAGATTGGTTTCG+AGG | + | chr7_3:86366936-86366955 | None:intergenic | 40.0% |
| TCTGGTGAAATCTGCATAAG+AGG | - | chr7_3:86366945-86366964 | Msa1133220:CDS | 40.0% | |
| ! | GATTTCTTGTGGTGCCAATT+TGG | + | chr7_3:86367336-86367355 | None:intergenic | 40.0% |
| GGTCTCAAACCAATATCATC+AGG | - | chr7_3:86367374-86367393 | Msa1133220:CDS | 40.0% | |
| !! | TTGGGTTGACCTGATGATAT+TGG | + | chr7_3:86367386-86367405 | None:intergenic | 40.0% |
| ! | TTTAGAGGCGTGAGAAATCA+AGG | - | chr7_3:86367930-86367949 | Msa1133220:intron | 40.0% |
| ! | TTGAAGTGTCCTCTCTTCAT+GGG | - | chr7_3:86368158-86368177 | Msa1133220:intron | 40.0% |
| !! | TGGAGCTGGATTGTTTTGTT+TGG | + | chr7_3:86368196-86368215 | None:intergenic | 40.0% |
| ACATTACATGAAAGTGGAGC+TGG | + | chr7_3:86368210-86368229 | None:intergenic | 40.0% | |
| GAGAGAACCATAGACAAAGA+AGG | - | chr7_3:86368385-86368404 | Msa1133220:intron | 40.0% | |
| GAACCATAGACAAAGAAGGT+TGG | - | chr7_3:86368389-86368408 | Msa1133220:intron | 40.0% | |
| CAACCAACCTTCTTTGTCTA+TGG | + | chr7_3:86368395-86368414 | None:intergenic | 40.0% | |
| GCATTTGTGGTGAGATCAAA+TGG | - | chr7_3:86368732-86368751 | Msa1133220:intron | 40.0% | |
| GTGAGTTAAGATCTTAGAGC+GGG | - | chr7_3:86368952-86368971 | Msa1133220:intron | 40.0% | |
| TCACCTAAATGTTGTGTGTG+AGG | - | chr7_3:86369018-86369037 | Msa1133220:intron | 40.0% | |
| !! | ATTTTGCCTGATGGTGACTT+GGG | + | chr7_3:86369166-86369185 | None:intergenic | 40.0% |
| ACGTCCATAAGCGGAAAATT+TGG | - | chr7_3:86369427-86369446 | Msa1133220:five_prime_UTR | 40.0% | |
| CGTCCATAAGCGGAAAATTT+GGG | - | chr7_3:86369428-86369447 | Msa1133220:five_prime_UTR | 40.0% | |
| GTCCATAAGCGGAAAATTTG+GGG | - | chr7_3:86369429-86369448 | Msa1133220:five_prime_UTR | 40.0% | |
| ! | AACCCCAAATTTTCCGCTTA+TGG | + | chr7_3:86369434-86369453 | None:intergenic | 40.0% |
| !! | GCACCTGCTTTTACATTCAC+TGG | + | chr7_3:86366849-86366868 | None:intergenic | 45.0% |
| AAGATTGTGGATCCTGACAC+TGG | - | chr7_3:86366900-86366919 | Msa1133220:CDS | 45.0% | |
| AGAGGCGACCAAATCATGAA+AGG | - | chr7_3:86366963-86366982 | Msa1133220:CDS | 45.0% | |
| ATCGCAGGTTCGATTTCTTG+TGG | + | chr7_3:86367347-86367366 | None:intergenic | 45.0% | |
| TATCATCAGGTCAACCCAAG+TGG | - | chr7_3:86367387-86367406 | Msa1133220:CDS | 45.0% | |
| ! | AAACGGACTCTAAGTCCCAA+AGG | - | chr7_3:86367765-86367784 | Msa1133220:intron | 45.0% |
| ! | GTTGAAGTGTCCTCTCTTCA+TGG | - | chr7_3:86368157-86368176 | Msa1133220:intron | 45.0% |
| CAACAACATCCCATGAAGAG+AGG | + | chr7_3:86368170-86368189 | None:intergenic | 45.0% | |
| ! | AGAAGAGCTTCAAGTTCAGC+TGG | + | chr7_3:86368514-86368533 | None:intergenic | 45.0% |
| !! | AGAGGTACCTGTTGCATTTG+TGG | - | chr7_3:86368719-86368738 | Msa1133220:intron | 45.0% |
| GATCTCACCACAAATGCAAC+AGG | + | chr7_3:86368729-86368748 | None:intergenic | 45.0% | |
| !! | GATTTTGCCTGATGGTGACT+TGG | + | chr7_3:86369167-86369186 | None:intergenic | 45.0% |
| ! | TTGCGCAAGATTTTGCCTGA+TGG | + | chr7_3:86369175-86369194 | None:intergenic | 45.0% |
| ATCAGGCAAAATCTTGCGCA+AGG | - | chr7_3:86369174-86369193 | Msa1133220:CDS | 45.0% | |
| AACATTATGTGTTGGGACGG+AGG | + | chr7_3:86369461-86369480 | None:intergenic | 45.0% | |
| !! | TATTAAATTAATTTAAAAGA+AGG | + | chr7_3:86367047-86367066 | None:intergenic | 5.0% |
| !! | TAAATTAATTTAATATACTT+TGG | - | chr7_3:86367052-86367071 | Msa1133220:intron | 5.0% |
| !! | AAATTAATTTAATATACTTT+GGG | - | chr7_3:86367053-86367072 | Msa1133220:intron | 5.0% |
| !! | ATTTATAATAACAATTTAAT+TGG | + | chr7_3:86368032-86368051 | None:intergenic | 5.0% |
| !! | TAATTTATTAAAAAAAAGAT+TGG | + | chr7_3:86368268-86368287 | None:intergenic | 5.0% |
| ACAGGGATACGGAATGACTG+AGG | - | chr7_3:86366782-86366801 | Msa1133220:three_prime_UTR | 50.0% | |
| ATCGAACCTGCGATTTCGAG+AGG | - | chr7_3:86367353-86367372 | Msa1133220:CDS | 50.0% | |
| TTGAGACCTCTCGAAATCGC+AGG | + | chr7_3:86367362-86367381 | None:intergenic | 50.0% | |
| AGAATGAAGGATGAAGCGGC+TGG | - | chr7_3:86368696-86368715 | Msa1133220:intron | 50.0% | |
| GCAATTCCCAAGTCACCATC+AGG | - | chr7_3:86369157-86369176 | Msa1133220:CDS | 50.0% | |
| TTGAGAGCAAAGCTAGCAGC+AGG | - | chr7_3:86369199-86369218 | Msa1133220:CDS | 50.0% | |
| GGGATACGGAATGACTGAGG+CGG | - | chr7_3:86366785-86366804 | Msa1133220:three_prime_UTR | 55.0% | |
| GGATACGGAATGACTGAGGC+GGG | - | chr7_3:86366786-86366805 | Msa1133220:three_prime_UTR | 55.0% | |
| GATACGGAATGACTGAGGCG+GGG | - | chr7_3:86366787-86366806 | Msa1133220:three_prime_UTR | 55.0% | |
| GAAGGATGAAGCGGCTGGAG+AGG | - | chr7_3:86368701-86368720 | Msa1133220:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 86366581 | 86369535 | 86366581 | ID=Msa1133220;Name=Msa1133220 |
| chr7_3 | mRNA | 86366581 | 86369535 | 86366581 | ID=Msa1133220-mRNA-1;Parent=Msa1133220;Name=Msa1133220-mRNA-1;_AED=0.27;_eAED=0.27;_QI=214|1|1|1|1|1|4|301|209 |
| chr7_3 | exon | 86366581 | 86367001 | 86366581 | ID=Msa1133220-mRNA-1:exon:25993;Parent=Msa1133220-mRNA-1 |
| chr7_3 | exon | 86367313 | 86367418 | 86367313 | ID=Msa1133220-mRNA-1:exon:25992;Parent=Msa1133220-mRNA-1 |
| chr7_3 | exon | 86367544 | 86367757 | 86367544 | ID=Msa1133220-mRNA-1:exon:25991;Parent=Msa1133220-mRNA-1 |
| chr7_3 | exon | 86369132 | 86369535 | 86369132 | ID=Msa1133220-mRNA-1:exon:25990;Parent=Msa1133220-mRNA-1 |
| chr7_3 | five_prime_UTR | 86369322 | 86369535 | 86369322 | ID=Msa1133220-mRNA-1:five_prime_utr;Parent=Msa1133220-mRNA-1 |
| chr7_3 | CDS | 86369132 | 86369321 | 86369132 | ID=Msa1133220-mRNA-1:cds;Parent=Msa1133220-mRNA-1 |
| chr7_3 | CDS | 86367544 | 86367757 | 86367544 | ID=Msa1133220-mRNA-1:cds;Parent=Msa1133220-mRNA-1 |
| chr7_3 | CDS | 86367313 | 86367418 | 86367313 | ID=Msa1133220-mRNA-1:cds;Parent=Msa1133220-mRNA-1 |
| chr7_3 | CDS | 86366882 | 86367001 | 86366882 | ID=Msa1133220-mRNA-1:cds;Parent=Msa1133220-mRNA-1 |
| chr7_3 | three_prime_UTR | 86366581 | 86366881 | 86366581 | ID=Msa1133220-mRNA-1:three_prime_utr;Parent=Msa1133220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
