AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0430810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430810 MtrunA17_Chr3g0134611 98.160 326 6 0 1 326 1 326 0.0 664
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430810 AT5G65860.2 75.155 322 78 1 4 323 5 326 0.0 527
Msa0430810 AT5G65860.1 75.155 322 78 1 4 323 25 346 0.0 527
Msa0430810 AT5G65860.3 75.155 322 78 1 4 323 5 326 0.0 527

Find 106 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTCTTGAGCTTGAGAATT+TGG 0.148087 3_2:+82678144 Msa0430810:CDS
TGATTCCGGTTATGATTATT+TGG 0.213704 3_2:+82676792 Msa0430810:CDS
CATGTACTCAATATTGGATT+TGG 0.261666 3_2:+82676934 Msa0430810:CDS
TCTCTTGAGCTTGAGAATTT+GGG 0.285212 3_2:+82678145 Msa0430810:CDS
ATTGCCTGTTAAGGATTGTT+TGG 0.285893 3_2:+82678189 Msa0430810:CDS
TTGCCTGTTAAGGATTGTTT+GGG 0.287460 3_2:+82678190 Msa0430810:CDS
CTATGCGAGGCGGCGATTAA+AGG 0.287831 3_2:+82676232 Msa0430810:CDS
GAAGAAGCTCATAAGCTTCT+TGG 0.296988 3_2:-82676456 None:intergenic
GTTATGATTATTTGGAAGAT+AGG 0.317017 3_2:+82676800 Msa0430810:CDS
TTCTCTCCGCCGGTGCTCCT+TGG 0.327627 3_2:+82676377 Msa0430810:CDS
ACGTATGCTTCGCACGGGTT+GGG 0.340731 3_2:+82677038 Msa0430810:CDS
TCTTTCTTCAATGGCCTTTG+TGG 0.351869 3_2:+82678082 Msa0430810:CDS
ATTAATTCCATTGCCTGTTA+AGG 0.360892 3_2:+82678180 Msa0430810:CDS
CATGCTAAAGCTGTTTGTTC+AGG 0.364371 3_2:+82676904 Msa0430810:CDS
GGTGGTCATGTACTCAATAT+TGG 0.375114 3_2:+82676928 Msa0430810:CDS
CTCAATATTGGATTTGGAAT+GGG 0.395612 3_2:+82676940 Msa0430810:CDS
GGAATATACTCTTTCTTCAA+TGG 0.395895 3_2:+82678073 Msa0430810:CDS
TCATCTGCAGACTGACAAAC+AGG 0.396199 3_2:-82678271 None:intergenic
AACGTATGCTTCGCACGGGT+TGG 0.424986 3_2:+82677037 Msa0430810:CDS
TGCTTTGCGGCGAGCATAAG+AGG 0.429396 3_2:-82676328 None:intergenic
ATCTTCCAAATAATCATAAC+CGG 0.430063 3_2:-82676797 None:intergenic
GAAAAGAAAAGCACTGATTC+CGG 0.430789 3_2:+82676778 Msa0430810:CDS
ATTGTTGCTTGTGTAACTTA+TGG 0.433260 3_2:+82678368 Msa0430810:three_prime_UTR
CCATGTTGTTTACTGCCACT+TGG 0.440964 3_2:+82678120 Msa0430810:CDS
TATGGTATTTGTAAGAGAAC+AGG 0.442003 3_2:+82678386 Msa0430810:three_prime_UTR
CGTATGCTTCGCACGGGTTG+GGG 0.445579 3_2:+82677039 Msa0430810:CDS
GGGATATTCTTTGACACCTA+CGG 0.456919 3_2:+82677989 Msa0430810:intron
AATTATGAGCTTAGTGTACA+TGG 0.459923 3_2:+82678505 Msa0430810:three_prime_UTR
TTAGCATGAGCCTCCATCAA+TGG 0.470308 3_2:-82676889 None:intergenic
GGGTGCATGGCCGTGCTTTG+CGG 0.480399 3_2:-82676341 None:intergenic
ATTCGATCTGAATTAGTGTT+GGG 0.480443 3_2:+82676739 Msa0430810:CDS
CCACCCGGCTTCAACAATAC+AGG 0.482020 3_2:-82678052 None:intergenic
GGATATTCTTTGACACCTAC+GGG 0.485801 3_2:+82677990 Msa0430810:CDS
ACTCAATATTGGATTTGGAA+TGG 0.488555 3_2:+82676939 Msa0430810:CDS
TATGAGCTTCTTCTCAATGC+TGG 0.492065 3_2:+82676466 Msa0430810:CDS
TTCTTCAATGGCCTTTGTGG+TGG 0.493941 3_2:+82678085 Msa0430810:CDS
GTTGGGAACAATTGCTAGGA+AGG 0.504005 3_2:+82676756 Msa0430810:CDS
TTATGATTATTTGGAAGATA+GGG 0.505378 3_2:+82676801 Msa0430810:CDS
GGAGAGAAGGATGTCGAGGA+TGG 0.507596 3_2:-82676362 None:intergenic
CTCGACATCCTTCTCTCCGC+CGG 0.511422 3_2:+82676367 Msa0430810:CDS
TCAACAATGGTATGTTTCAC+AGG 0.511587 3_2:-82676994 None:intergenic
AAGGTGTCAAACACAGATAC+TGG 0.517912 3_2:+82678227 Msa0430810:CDS
TCTCCCTGTATTGTTGAAGC+CGG 0.518751 3_2:+82678048 Msa0430810:CDS
GGCATGGGAGAAGCCATTGA+TGG 0.521455 3_2:+82676876 Msa0430810:CDS
TATTCGATCTGAATTAGTGT+TGG 0.521798 3_2:+82676738 Msa0430810:CDS
CATATGTTTCAAGCTGAGAC+AGG 0.523440 3_2:-82677107 None:intergenic
TCTCCTTCCAACCTTTCCGC+CGG 0.523539 3_2:+82676409 Msa0430810:CDS
CTCTTGAGCTTGAGAATTTG+GGG 0.525010 3_2:+82678146 Msa0430810:CDS
AAACAATCCTTAACAGGCAA+TGG 0.525589 3_2:-82678187 None:intergenic
CTCCCTGTATTGTTGAAGCC+GGG 0.525798 3_2:+82678049 Msa0430810:CDS
GTTACTCATTTCGACGGCGA+TGG 0.526133 3_2:+82676298 Msa0430810:CDS
TTAGAGTGGCGCAAAGATGA+AGG 0.530591 3_2:+82676201 Msa0430810:exon
AAAGCTGTTTGTTCAGGAGG+TGG 0.540005 3_2:+82676910 Msa0430810:CDS
AAGGAGCACCGGCGGAGAGA+AGG 0.543782 3_2:-82676375 None:intergenic
TAGTGTTGGGAACAATTGCT+AGG 0.547152 3_2:+82676752 Msa0430810:CDS
AGCATACGTTCATAAACCTC+AGG 0.548913 3_2:-82677024 None:intergenic
GCTAAAGCTGTTTGTTCAGG+AGG 0.553788 3_2:+82676907 Msa0430810:CDS
TCTCAGCTTGAAACATATGA+TGG 0.557266 3_2:+82677111 Msa0430810:CDS
TCAACAATACAGGGAGATGT+TGG 0.557688 3_2:-82678042 None:intergenic
TTGCGAAATCACCGGCGGAA+AGG 0.562943 3_2:-82676420 None:intergenic
GGATGTCGAGGATGGGTGCA+TGG 0.563108 3_2:-82676354 None:intergenic
GAAATGAGTAACGTCGGCAC+CGG 0.571997 3_2:-82676287 None:intergenic
GATTAAAGGTGAGACGGAGA+AGG 0.572642 3_2:+82676246 Msa0430810:CDS
CTTATGCTCGCCGCAAAGCA+CGG 0.574060 3_2:+82676331 Msa0430810:CDS
GCCGACGTTACTCATTTCGA+CGG 0.576572 3_2:+82676292 Msa0430810:CDS
GAGAGAAGGATGTCGAGGAT+GGG 0.580848 3_2:-82676361 None:intergenic
GAAATCACCGGCGGAAAGGT+TGG 0.582456 3_2:-82676416 None:intergenic
TTCTTGCATTGCGAAATCAC+CGG 0.583608 3_2:-82676428 None:intergenic
AAGAGCGTTCCAAGGAGCAC+CGG 0.584379 3_2:-82676386 None:intergenic
CACCCGGCTTCAACAATACA+GGG 0.584983 3_2:-82678051 None:intergenic
ACAATACAGGGAGATGTTGG+TGG 0.586371 3_2:-82678039 None:intergenic
GTAAAGTCTATTATTGACTC+CGG 0.590503 3_2:+82676268 Msa0430810:CDS
GAAGGAGAAAGAGCGTTCCA+AGG 0.591032 3_2:-82676394 None:intergenic
TCGCACGGGTTGGGGTGAGA+AGG 0.593861 3_2:+82677047 Msa0430810:CDS
CATTGTTGAGGCTCATCCTG+AGG 0.595016 3_2:+82677008 Msa0430810:CDS
AGCGTTCCAAGGAGCACCGG+CGG 0.601767 3_2:-82676383 None:intergenic
TGAGAGTAAAGCTGTGATGA+TGG 0.605332 3_2:+82676855 Msa0430810:CDS
TATGAACGTATGCTTCGCAC+GGG 0.607053 3_2:+82677033 Msa0430810:CDS
TCACCGGCGGAAAGGTTGGA+AGG 0.609268 3_2:-82676412 None:intergenic
CCAAGTGGCAGTAAACAACA+TGG 0.611294 3_2:-82678120 None:intergenic
GGTGATTTCGCAATGCAAGA+AGG 0.613606 3_2:+82676430 Msa0430810:CDS
TTATGAACGTATGCTTCGCA+CGG 0.616186 3_2:+82677032 Msa0430810:CDS
CCTGTATTGTTGAAGCCGGG+TGG 0.618155 3_2:+82678052 Msa0430810:CDS
GTAAAGCTGTGATGATGGCA+TGG 0.618846 3_2:+82676860 Msa0430810:CDS
CGGCGGAGAGAAGGATGTCG+AGG 0.626647 3_2:-82676366 None:intergenic
AAGAAAGAGTATATTCCACC+CGG 0.629337 3_2:-82678067 None:intergenic
TGCCTGTTAAGGATTGTTTG+GGG 0.632646 3_2:+82678191 Msa0430810:CDS
GGCGGCGATTAAAGGTGAGA+CGG 0.637047 3_2:+82676240 Msa0430810:CDS
ATGGGAGAAGCCATTGATGG+AGG 0.639979 3_2:+82676879 Msa0430810:CDS
GCCTGTTAAGGATTGTTTGG+GGG 0.641124 3_2:+82678192 Msa0430810:CDS
AGGCAATGGAATTAATTGTG+TGG 0.643792 3_2:-82678173 None:intergenic
GAAGGAAGAAGAACTATGCG+AGG 0.647053 3_2:+82676219 Msa0430810:CDS
CTCAGGATGAGCCTCAACAA+TGG 0.655173 3_2:-82677007 None:intergenic
TGTGAAACATACCATTGTTG+AGG 0.661097 3_2:+82676996 Msa0430810:CDS
ATTATGAGCTTAGTGTACAT+GGG 0.665478 3_2:+82678506 Msa0430810:three_prime_UTR
AATGCTGAGTAAGCTTAGAG+TGG 0.673677 3_2:+82676187 Msa0430810:five_prime_UTR
TAAAGCTGTGATGATGGCAT+GGG 0.687762 3_2:+82676861 Msa0430810:CDS
TTGCATTGCGAAATCACCGG+CGG 0.690041 3_2:-82676425 None:intergenic
AAAATGCATTACCACCACAA+AGG 0.694739 3_2:-82678096 None:intergenic
CAAGCTCAAGAGATACCAAG+TGG 0.699247 3_2:-82678135 None:intergenic
GCCGTCGAAATGAGTAACGT+CGG 0.710374 3_2:-82676293 None:intergenic
GGAAGAAGAACTATGCGAGG+CGG 0.711413 3_2:+82676222 Msa0430810:CDS
CATCTGCAGACTGACAAACA+GGG 0.712802 3_2:-82678270 None:intergenic
GTCGTCATAGTACTCCCCGT+AGG 0.723736 3_2:-82678005 None:intergenic
GATATTCTTTGACACCTACG+GGG 0.737280 3_2:+82677991 Msa0430810:CDS
CTGCAGACTGACAAACAGGG+AGG 0.782216 3_2:-82678267 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCAAAATTTTATTACAT+TGG + chr3_2:82678436-82678455 Msa0430810:three_prime_UTR 10.0%
!!! TTTCAAAATTTTATTACATT+GGG + chr3_2:82678437-82678456 Msa0430810:three_prime_UTR 10.0%
!!! ATTTCAAAATTTTATTACAT+TGG + chr3_2:82678436-82678455 Msa0430810:three_prime_UTR 10.0%
!!! TTTCAAAATTTTATTACATT+GGG + chr3_2:82678437-82678456 Msa0430810:three_prime_UTR 10.0%
!! AAAAAGAAAATCAAAACAAA+TGG - chr3_2:82677967-82677986 None:intergenic 15.0%
!! AAAAAGAAAATCAAAACAAA+TGG - chr3_2:82677967-82677986 None:intergenic 15.0%
!!! TCATTTTCACAAATTATTAC+CGG - chr3_2:82676564-82676583 None:intergenic 20.0%
!!! TTTGTGTATTTTACTTTGTT+AGG + chr3_2:82676715-82676734 Msa0430810:intron 20.0%
!! TTATGATTATTTGGAAGATA+GGG + chr3_2:82676801-82676820 Msa0430810:CDS 20.0%
!!! TTTTAGTGAAGATAAAGTAA+TGG + chr3_2:82676828-82676847 Msa0430810:CDS 20.0%
!!! AATAGAATTGATTTCGTAAA+AGG + chr3_2:82677263-82677282 Msa0430810:intron 20.0%
!! AACTTAAATACAAATGCTTA+TGG + chr3_2:82677290-82677309 Msa0430810:intron 20.0%
!! TAAAAAAAAACAGCAGTAAT+AGG + chr3_2:82677420-82677439 Msa0430810:intron 20.0%
!! AAAAAAAAACAGCAGTAATA+GGG + chr3_2:82677421-82677440 Msa0430810:intron 20.0%
!!! TTGTTTTGATTTTCTTTTTC+AGG + chr3_2:82677968-82677987 Msa0430810:intron 20.0%
!!! TGTTTTGATTTTCTTTTTCA+GGG + chr3_2:82677969-82677988 Msa0430810:intron 20.0%
!!! GATTTTTTAGTTTTGAATGT+AGG + chr3_2:82678302-82678321 Msa0430810:exon 20.0%
!!! TCATTTTCACAAATTATTAC+CGG - chr3_2:82676564-82676583 None:intergenic 20.0%
!!! TTTGTGTATTTTACTTTGTT+AGG + chr3_2:82676715-82676734 Msa0430810:intron 20.0%
!! TTATGATTATTTGGAAGATA+GGG + chr3_2:82676801-82676820 Msa0430810:CDS 20.0%
!!! TTTTAGTGAAGATAAAGTAA+TGG + chr3_2:82676828-82676847 Msa0430810:CDS 20.0%
!!! AATAGAATTGATTTCGTAAA+AGG + chr3_2:82677263-82677282 Msa0430810:intron 20.0%
!! AACTTAAATACAAATGCTTA+TGG + chr3_2:82677290-82677309 Msa0430810:intron 20.0%
!! TAAAAAAAAACAGCAGTAAT+AGG + chr3_2:82677420-82677439 Msa0430810:intron 20.0%
!! AAAAAAAAACAGCAGTAATA+GGG + chr3_2:82677421-82677440 Msa0430810:intron 20.0%
!!! TTGTTTTGATTTTCTTTTTC+AGG + chr3_2:82677968-82677987 Msa0430810:intron 20.0%
!!! TGTTTTGATTTTCTTTTTCA+GGG + chr3_2:82677969-82677988 Msa0430810:intron 20.0%
!!! GATTTTTTAGTTTTGAATGT+AGG + chr3_2:82678302-82678321 Msa0430810:exon 20.0%
! TGTTTAACACTAACATGTAT+TGG + chr3_2:82676625-82676644 Msa0430810:intron 25.0%
! ATCTTCCAAATAATCATAAC+CGG - chr3_2:82676800-82676819 None:intergenic 25.0%
! GTTATGATTATTTGGAAGAT+AGG + chr3_2:82676800-82676819 Msa0430810:CDS 25.0%
!! GAAAATGTTCAGATCATTTT+TGG + chr3_2:82677069-82677088 Msa0430810:CDS 25.0%
! TTTCACAAAGGAAAAAACTT+AGG - chr3_2:82677461-82677480 None:intergenic 25.0%
! TTTCCTTTGTGAAATTTATG+TGG + chr3_2:82677467-82677486 Msa0430810:intron 25.0%
! TAACCACATAAATTTCACAA+AGG - chr3_2:82677473-82677492 None:intergenic 25.0%
!! TGGTTACAATTTAGTTTCTA+AGG + chr3_2:82677487-82677506 Msa0430810:intron 25.0%
!! GGTTACAATTTAGTTTCTAA+GGG + chr3_2:82677488-82677507 Msa0430810:intron 25.0%
! ATTAAAAGTAGCATCTATGT+TGG - chr3_2:82677584-82677603 None:intergenic 25.0%
!! TCTAATCAAACTAAGTATTG+AGG + chr3_2:82677608-82677627 Msa0430810:intron 25.0%
! TTAGTGAAAATACATGTCTT+TGG - chr3_2:82677659-82677678 None:intergenic 25.0%
!!! AAGTGTTTTTGTTTTATCAG+TGG - chr3_2:82677722-82677741 None:intergenic 25.0%
! TTACTTAATGTTAAAAAGCC+AGG + chr3_2:82677740-82677759 Msa0430810:intron 25.0%
! TTTGCTTATGTGAAAAACAT+AGG + chr3_2:82677866-82677885 Msa0430810:intron 25.0%
! TTGCTTATGTGAAAAACATA+GGG + chr3_2:82677867-82677886 Msa0430810:intron 25.0%
! TGTTTAACACTAACATGTAT+TGG + chr3_2:82676625-82676644 Msa0430810:intron 25.0%
! ATCTTCCAAATAATCATAAC+CGG - chr3_2:82676800-82676819 None:intergenic 25.0%
! GTTATGATTATTTGGAAGAT+AGG + chr3_2:82676800-82676819 Msa0430810:CDS 25.0%
!! GAAAATGTTCAGATCATTTT+TGG + chr3_2:82677069-82677088 Msa0430810:CDS 25.0%
! TTTCACAAAGGAAAAAACTT+AGG - chr3_2:82677461-82677480 None:intergenic 25.0%
! TTTCCTTTGTGAAATTTATG+TGG + chr3_2:82677467-82677486 Msa0430810:intron 25.0%
! TAACCACATAAATTTCACAA+AGG - chr3_2:82677473-82677492 None:intergenic 25.0%
!! TGGTTACAATTTAGTTTCTA+AGG + chr3_2:82677487-82677506 Msa0430810:intron 25.0%
!! GGTTACAATTTAGTTTCTAA+GGG + chr3_2:82677488-82677507 Msa0430810:intron 25.0%
! ATTAAAAGTAGCATCTATGT+TGG - chr3_2:82677584-82677603 None:intergenic 25.0%
!! TCTAATCAAACTAAGTATTG+AGG + chr3_2:82677608-82677627 Msa0430810:intron 25.0%
! TTAGTGAAAATACATGTCTT+TGG - chr3_2:82677659-82677678 None:intergenic 25.0%
!!! AAGTGTTTTTGTTTTATCAG+TGG - chr3_2:82677722-82677741 None:intergenic 25.0%
! TTACTTAATGTTAAAAAGCC+AGG + chr3_2:82677740-82677759 Msa0430810:intron 25.0%
! TTTGCTTATGTGAAAAACAT+AGG + chr3_2:82677866-82677885 Msa0430810:intron 25.0%
! TTGCTTATGTGAAAAACATA+GGG + chr3_2:82677867-82677886 Msa0430810:intron 25.0%
!! GTAAAGTCTATTATTGACTC+CGG + chr3_2:82676268-82676287 Msa0430810:CDS 30.0%
ATAGTTAATTAGACACAGAG+TGG - chr3_2:82676505-82676524 None:intergenic 30.0%
TATTCGATCTGAATTAGTGT+TGG + chr3_2:82676738-82676757 Msa0430810:CDS 30.0%
ATTCGATCTGAATTAGTGTT+GGG + chr3_2:82676739-82676758 Msa0430810:CDS 30.0%
TGATTCCGGTTATGATTATT+TGG + chr3_2:82676792-82676811 Msa0430810:CDS 30.0%
CATGTACTCAATATTGGATT+TGG + chr3_2:82676934-82676953 Msa0430810:CDS 30.0%
ACTCAATATTGGATTTGGAA+TGG + chr3_2:82676939-82676958 Msa0430810:CDS 30.0%
! CTCAATATTGGATTTGGAAT+GGG + chr3_2:82676940-82676959 Msa0430810:CDS 30.0%
TGCTGAAATTAAACATGTAC+TGG - chr3_2:82677178-82677197 None:intergenic 30.0%
ATTTCAGCACTAGAATTGAT+TGG + chr3_2:82677189-82677208 Msa0430810:intron 30.0%
TTTCAGCACTAGAATTGATT+GGG + chr3_2:82677190-82677209 Msa0430810:intron 30.0%
TAAGGGAAGTTGTTTATGAT+TGG + chr3_2:82677505-82677524 Msa0430810:intron 30.0%
! TACTATTTTGCAACGGTATT+TGG + chr3_2:82677792-82677811 Msa0430810:intron 30.0%
TTATGTGAAAAACATAGGGA+AGG + chr3_2:82677871-82677890 Msa0430810:intron 30.0%
GGAATATACTCTTTCTTCAA+TGG + chr3_2:82678073-82678092 Msa0430810:CDS 30.0%
ATTAATTCCATTGCCTGTTA+AGG + chr3_2:82678180-82678199 Msa0430810:CDS 30.0%
! ATTGTTGCTTGTGTAACTTA+TGG + chr3_2:82678368-82678387 Msa0430810:three_prime_UTR 30.0%
TATGGTATTTGTAAGAGAAC+AGG + chr3_2:82678386-82678405 Msa0430810:three_prime_UTR 30.0%
AATTATGAGCTTAGTGTACA+TGG + chr3_2:82678505-82678524 Msa0430810:three_prime_UTR 30.0%
ATTATGAGCTTAGTGTACAT+GGG + chr3_2:82678506-82678525 Msa0430810:three_prime_UTR 30.0%
!! GTAAAGTCTATTATTGACTC+CGG + chr3_2:82676268-82676287 Msa0430810:CDS 30.0%
ATAGTTAATTAGACACAGAG+TGG - chr3_2:82676505-82676524 None:intergenic 30.0%
TATTCGATCTGAATTAGTGT+TGG + chr3_2:82676738-82676757 Msa0430810:CDS 30.0%
ATTCGATCTGAATTAGTGTT+GGG + chr3_2:82676739-82676758 Msa0430810:CDS 30.0%
TGATTCCGGTTATGATTATT+TGG + chr3_2:82676792-82676811 Msa0430810:CDS 30.0%
CATGTACTCAATATTGGATT+TGG + chr3_2:82676934-82676953 Msa0430810:CDS 30.0%
ACTCAATATTGGATTTGGAA+TGG + chr3_2:82676939-82676958 Msa0430810:CDS 30.0%
! CTCAATATTGGATTTGGAAT+GGG + chr3_2:82676940-82676959 Msa0430810:CDS 30.0%
TGCTGAAATTAAACATGTAC+TGG - chr3_2:82677178-82677197 None:intergenic 30.0%
ATTTCAGCACTAGAATTGAT+TGG + chr3_2:82677189-82677208 Msa0430810:intron 30.0%
TTTCAGCACTAGAATTGATT+GGG + chr3_2:82677190-82677209 Msa0430810:intron 30.0%
TAAGGGAAGTTGTTTATGAT+TGG + chr3_2:82677505-82677524 Msa0430810:intron 30.0%
! TACTATTTTGCAACGGTATT+TGG + chr3_2:82677792-82677811 Msa0430810:intron 30.0%
TTATGTGAAAAACATAGGGA+AGG + chr3_2:82677871-82677890 Msa0430810:intron 30.0%
GGAATATACTCTTTCTTCAA+TGG + chr3_2:82678073-82678092 Msa0430810:CDS 30.0%
ATTAATTCCATTGCCTGTTA+AGG + chr3_2:82678180-82678199 Msa0430810:CDS 30.0%
! ATTGTTGCTTGTGTAACTTA+TGG + chr3_2:82678368-82678387 Msa0430810:three_prime_UTR 30.0%
TATGGTATTTGTAAGAGAAC+AGG + chr3_2:82678386-82678405 Msa0430810:three_prime_UTR 30.0%
AATTATGAGCTTAGTGTACA+TGG + chr3_2:82678505-82678524 Msa0430810:three_prime_UTR 30.0%
ATTATGAGCTTAGTGTACAT+GGG + chr3_2:82678506-82678525 Msa0430810:three_prime_UTR 30.0%
!! GAAAAGAAAAGCACTGATTC+CGG + chr3_2:82676778-82676797 Msa0430810:CDS 35.0%
TCAACAATGGTATGTTTCAC+AGG - chr3_2:82676997-82677016 None:intergenic 35.0%
TGTGAAACATACCATTGTTG+AGG + chr3_2:82676996-82677015 Msa0430810:CDS 35.0%
!!! TTCAGATCATTTTTGGTCGT+TGG + chr3_2:82677076-82677095 Msa0430810:CDS 35.0%
TCTCAGCTTGAAACATATGA+TGG + chr3_2:82677111-82677130 Msa0430810:CDS 35.0%
TCACTAACATCACAGTTGAT+AGG + chr3_2:82677672-82677691 Msa0430810:intron 35.0%
TCAGTGGATAGTATCAGAAT+TGG - chr3_2:82677706-82677725 None:intergenic 35.0%
! TGTGAGCTACTATTTTGCAA+CGG + chr3_2:82677785-82677804 Msa0430810:intron 35.0%
ATAAGCAAAACTTGCATTCC+TGG - chr3_2:82677855-82677874 None:intergenic 35.0%
GTTTGTTTGATTGTAATGCC+TGG + chr3_2:82677900-82677919 Msa0430810:intron 35.0%
TAATGCCTGGTAATTGTAAC+TGG + chr3_2:82677913-82677932 Msa0430810:intron 35.0%
ACAATCCAGTTACAATTACC+AGG - chr3_2:82677921-82677940 None:intergenic 35.0%
! AAGAAAGAGTATATTCCACC+CGG - chr3_2:82678070-82678089 None:intergenic 35.0%
AAAATGCATTACCACCACAA+AGG - chr3_2:82678099-82678118 None:intergenic 35.0%
ATCTCTTGAGCTTGAGAATT+TGG + chr3_2:82678144-82678163 Msa0430810:CDS 35.0%
TCTCTTGAGCTTGAGAATTT+GGG + chr3_2:82678145-82678164 Msa0430810:CDS 35.0%
AGGCAATGGAATTAATTGTG+TGG - chr3_2:82678176-82678195 None:intergenic 35.0%
AAACAATCCTTAACAGGCAA+TGG - chr3_2:82678190-82678209 None:intergenic 35.0%
ATTGCCTGTTAAGGATTGTT+TGG + chr3_2:82678189-82678208 Msa0430810:CDS 35.0%
TTGCCTGTTAAGGATTGTTT+GGG + chr3_2:82678190-82678209 Msa0430810:CDS 35.0%
!! GAAAAGAAAAGCACTGATTC+CGG + chr3_2:82676778-82676797 Msa0430810:CDS 35.0%
TCAACAATGGTATGTTTCAC+AGG - chr3_2:82676997-82677016 None:intergenic 35.0%
TGTGAAACATACCATTGTTG+AGG + chr3_2:82676996-82677015 Msa0430810:CDS 35.0%
!!! TTCAGATCATTTTTGGTCGT+TGG + chr3_2:82677076-82677095 Msa0430810:CDS 35.0%
TCTCAGCTTGAAACATATGA+TGG + chr3_2:82677111-82677130 Msa0430810:CDS 35.0%
TCACTAACATCACAGTTGAT+AGG + chr3_2:82677672-82677691 Msa0430810:intron 35.0%
TCAGTGGATAGTATCAGAAT+TGG - chr3_2:82677706-82677725 None:intergenic 35.0%
! TGTGAGCTACTATTTTGCAA+CGG + chr3_2:82677785-82677804 Msa0430810:intron 35.0%
ATAAGCAAAACTTGCATTCC+TGG - chr3_2:82677855-82677874 None:intergenic 35.0%
GTTTGTTTGATTGTAATGCC+TGG + chr3_2:82677900-82677919 Msa0430810:intron 35.0%
TAATGCCTGGTAATTGTAAC+TGG + chr3_2:82677913-82677932 Msa0430810:intron 35.0%
ACAATCCAGTTACAATTACC+AGG - chr3_2:82677921-82677940 None:intergenic 35.0%
! AAGAAAGAGTATATTCCACC+CGG - chr3_2:82678070-82678089 None:intergenic 35.0%
AAAATGCATTACCACCACAA+AGG - chr3_2:82678099-82678118 None:intergenic 35.0%
ATCTCTTGAGCTTGAGAATT+TGG + chr3_2:82678144-82678163 Msa0430810:CDS 35.0%
TCTCTTGAGCTTGAGAATTT+GGG + chr3_2:82678145-82678164 Msa0430810:CDS 35.0%
AGGCAATGGAATTAATTGTG+TGG - chr3_2:82678176-82678195 None:intergenic 35.0%
AAACAATCCTTAACAGGCAA+TGG - chr3_2:82678190-82678209 None:intergenic 35.0%
ATTGCCTGTTAAGGATTGTT+TGG + chr3_2:82678189-82678208 Msa0430810:CDS 35.0%
TTGCCTGTTAAGGATTGTTT+GGG + chr3_2:82678190-82678209 Msa0430810:CDS 35.0%
AATGCTGAGTAAGCTTAGAG+TGG + chr3_2:82676187-82676206 Msa0430810:five_prime_UTR 40.0%
TTCTTGCATTGCGAAATCAC+CGG - chr3_2:82676431-82676450 None:intergenic 40.0%
GAAGAAGCTCATAAGCTTCT+TGG - chr3_2:82676459-82676478 None:intergenic 40.0%
TATGAGCTTCTTCTCAATGC+TGG + chr3_2:82676466-82676485 Msa0430810:CDS 40.0%
GACACAGAGTGGTTTGAATT+TGG - chr3_2:82676494-82676513 None:intergenic 40.0%
! ATGCCTTCCATTAGAAGTGT+CGG + chr3_2:82676651-82676670 Msa0430810:intron 40.0%
!! AATAGCACCGACACTTCTAA+TGG - chr3_2:82676661-82676680 None:intergenic 40.0%
! TAGTGTTGGGAACAATTGCT+AGG + chr3_2:82676752-82676771 Msa0430810:CDS 40.0%
TGAGAGTAAAGCTGTGATGA+TGG + chr3_2:82676855-82676874 Msa0430810:CDS 40.0%
!! TAAAGCTGTGATGATGGCAT+GGG + chr3_2:82676861-82676880 Msa0430810:CDS 40.0%
CATGCTAAAGCTGTTTGTTC+AGG + chr3_2:82676904-82676923 Msa0430810:CDS 40.0%
GGTGGTCATGTACTCAATAT+TGG + chr3_2:82676928-82676947 Msa0430810:CDS 40.0%
AGCATACGTTCATAAACCTC+AGG - chr3_2:82677027-82677046 None:intergenic 40.0%
TTATGAACGTATGCTTCGCA+CGG + chr3_2:82677032-82677051 Msa0430810:CDS 40.0%
CATATGTTTCAAGCTGAGAC+AGG - chr3_2:82677110-82677129 None:intergenic 40.0%
TGTGTGACTTAAGAATTGCC+TGG - chr3_2:82677761-82677780 None:intergenic 40.0%
GGGATATTCTTTGACACCTA+CGG + chr3_2:82677989-82678008 Msa0430810:intron 40.0%
GGATATTCTTTGACACCTAC+GGG + chr3_2:82677990-82678009 Msa0430810:CDS 40.0%
GATATTCTTTGACACCTACG+GGG + chr3_2:82677991-82678010 Msa0430810:CDS 40.0%
TCAACAATACAGGGAGATGT+TGG - chr3_2:82678045-82678064 None:intergenic 40.0%
TCTTTCTTCAATGGCCTTTG+TGG + chr3_2:82678082-82678101 Msa0430810:CDS 40.0%
CTCTTGAGCTTGAGAATTTG+GGG + chr3_2:82678146-82678165 Msa0430810:CDS 40.0%
TGCCTGTTAAGGATTGTTTG+GGG + chr3_2:82678191-82678210 Msa0430810:CDS 40.0%
ATTGTTTGGGGGAAGAAGTT+TGG + chr3_2:82678203-82678222 Msa0430810:CDS 40.0%
TTGTTTGGGGGAAGAAGTTT+GGG + chr3_2:82678204-82678223 Msa0430810:CDS 40.0%
! AAGGTGTCAAACACAGATAC+TGG + chr3_2:82678227-82678246 Msa0430810:CDS 40.0%
AATGCTGAGTAAGCTTAGAG+TGG + chr3_2:82676187-82676206 Msa0430810:five_prime_UTR 40.0%
TTCTTGCATTGCGAAATCAC+CGG - chr3_2:82676431-82676450 None:intergenic 40.0%
GAAGAAGCTCATAAGCTTCT+TGG - chr3_2:82676459-82676478 None:intergenic 40.0%
TATGAGCTTCTTCTCAATGC+TGG + chr3_2:82676466-82676485 Msa0430810:CDS 40.0%
GACACAGAGTGGTTTGAATT+TGG - chr3_2:82676494-82676513 None:intergenic 40.0%
! ATGCCTTCCATTAGAAGTGT+CGG + chr3_2:82676651-82676670 Msa0430810:intron 40.0%
!! AATAGCACCGACACTTCTAA+TGG - chr3_2:82676661-82676680 None:intergenic 40.0%
! TAGTGTTGGGAACAATTGCT+AGG + chr3_2:82676752-82676771 Msa0430810:CDS 40.0%
TGAGAGTAAAGCTGTGATGA+TGG + chr3_2:82676855-82676874 Msa0430810:CDS 40.0%
!! TAAAGCTGTGATGATGGCAT+GGG + chr3_2:82676861-82676880 Msa0430810:CDS 40.0%
CATGCTAAAGCTGTTTGTTC+AGG + chr3_2:82676904-82676923 Msa0430810:CDS 40.0%
GGTGGTCATGTACTCAATAT+TGG + chr3_2:82676928-82676947 Msa0430810:CDS 40.0%
AGCATACGTTCATAAACCTC+AGG - chr3_2:82677027-82677046 None:intergenic 40.0%
TTATGAACGTATGCTTCGCA+CGG + chr3_2:82677032-82677051 Msa0430810:CDS 40.0%
CATATGTTTCAAGCTGAGAC+AGG - chr3_2:82677110-82677129 None:intergenic 40.0%
TGTGTGACTTAAGAATTGCC+TGG - chr3_2:82677761-82677780 None:intergenic 40.0%
GGGATATTCTTTGACACCTA+CGG + chr3_2:82677989-82678008 Msa0430810:intron 40.0%
GGATATTCTTTGACACCTAC+GGG + chr3_2:82677990-82678009 Msa0430810:CDS 40.0%
GATATTCTTTGACACCTACG+GGG + chr3_2:82677991-82678010 Msa0430810:CDS 40.0%
TCAACAATACAGGGAGATGT+TGG - chr3_2:82678045-82678064 None:intergenic 40.0%
TCTTTCTTCAATGGCCTTTG+TGG + chr3_2:82678082-82678101 Msa0430810:CDS 40.0%
CTCTTGAGCTTGAGAATTTG+GGG + chr3_2:82678146-82678165 Msa0430810:CDS 40.0%
TGCCTGTTAAGGATTGTTTG+GGG + chr3_2:82678191-82678210 Msa0430810:CDS 40.0%
ATTGTTTGGGGGAAGAAGTT+TGG + chr3_2:82678203-82678222 Msa0430810:CDS 40.0%
TTGTTTGGGGGAAGAAGTTT+GGG + chr3_2:82678204-82678223 Msa0430810:CDS 40.0%
! AAGGTGTCAAACACAGATAC+TGG + chr3_2:82678227-82678246 Msa0430810:CDS 40.0%
TTAGAGTGGCGCAAAGATGA+AGG + chr3_2:82676201-82676220 Msa0430810:exon 45.0%
GAAGGAAGAAGAACTATGCG+AGG + chr3_2:82676219-82676238 Msa0430810:CDS 45.0%
GATTAAAGGTGAGACGGAGA+AGG + chr3_2:82676246-82676265 Msa0430810:CDS 45.0%
GGTGATTTCGCAATGCAAGA+AGG + chr3_2:82676430-82676449 Msa0430810:CDS 45.0%
GTTAGTGTCAGTTTCGTGTC+AGG - chr3_2:82676532-82676551 None:intergenic 45.0%
TGACACTAACACGTCAACAC+CGG + chr3_2:82676542-82676561 Msa0430810:intron 45.0%
GTTGGGAACAATTGCTAGGA+AGG + chr3_2:82676756-82676775 Msa0430810:CDS 45.0%
!! GTAAAGCTGTGATGATGGCA+TGG + chr3_2:82676860-82676879 Msa0430810:CDS 45.0%
TTAGCATGAGCCTCCATCAA+TGG - chr3_2:82676892-82676911 None:intergenic 45.0%
GCTAAAGCTGTTTGTTCAGG+AGG + chr3_2:82676907-82676926 Msa0430810:CDS 45.0%
AAAGCTGTTTGTTCAGGAGG+TGG + chr3_2:82676910-82676929 Msa0430810:CDS 45.0%
TATGAACGTATGCTTCGCAC+GGG + chr3_2:82677033-82677052 Msa0430810:CDS 45.0%
!! TGCATTCCTGGAAAGCATCT+GGG - chr3_2:82677843-82677862 None:intergenic 45.0%
!! TTGCATTCCTGGAAAGCATC+TGG - chr3_2:82677844-82677863 None:intergenic 45.0%
TGCCTCTAAACTCTTTGACG+TGG + chr3_2:82677940-82677959 Msa0430810:intron 45.0%
GCCTCTAAACTCTTTGACGT+GGG + chr3_2:82677941-82677960 Msa0430810:intron 45.0%
ACAATACAGGGAGATGTTGG+TGG - chr3_2:82678042-82678061 None:intergenic 45.0%
TCTCCCTGTATTGTTGAAGC+CGG + chr3_2:82678048-82678067 Msa0430810:CDS 45.0%
TTCTTCAATGGCCTTTGTGG+TGG + chr3_2:82678085-82678104 Msa0430810:CDS 45.0%
CCAAGTGGCAGTAAACAACA+TGG - chr3_2:82678123-82678142 None:intergenic 45.0%
! CCATGTTGTTTACTGCCACT+TGG + chr3_2:82678120-82678139 Msa0430810:CDS 45.0%
CAAGCTCAAGAGATACCAAG+TGG - chr3_2:82678138-82678157 None:intergenic 45.0%
GCCTGTTAAGGATTGTTTGG+GGG + chr3_2:82678192-82678211 Msa0430810:CDS 45.0%
TCCCCCAAACAATCCTTAAC+AGG - chr3_2:82678196-82678215 None:intergenic 45.0%
CATCTGCAGACTGACAAACA+GGG - chr3_2:82678273-82678292 None:intergenic 45.0%
TCATCTGCAGACTGACAAAC+AGG - chr3_2:82678274-82678293 None:intergenic 45.0%
TTAGAGTGGCGCAAAGATGA+AGG + chr3_2:82676201-82676220 Msa0430810:exon 45.0%
GAAGGAAGAAGAACTATGCG+AGG + chr3_2:82676219-82676238 Msa0430810:CDS 45.0%
GATTAAAGGTGAGACGGAGA+AGG + chr3_2:82676246-82676265 Msa0430810:CDS 45.0%
GGTGATTTCGCAATGCAAGA+AGG + chr3_2:82676430-82676449 Msa0430810:CDS 45.0%
GTTAGTGTCAGTTTCGTGTC+AGG - chr3_2:82676532-82676551 None:intergenic 45.0%
TGACACTAACACGTCAACAC+CGG + chr3_2:82676542-82676561 Msa0430810:intron 45.0%
GTTGGGAACAATTGCTAGGA+AGG + chr3_2:82676756-82676775 Msa0430810:CDS 45.0%
!! GTAAAGCTGTGATGATGGCA+TGG + chr3_2:82676860-82676879 Msa0430810:CDS 45.0%
TTAGCATGAGCCTCCATCAA+TGG - chr3_2:82676892-82676911 None:intergenic 45.0%
GCTAAAGCTGTTTGTTCAGG+AGG + chr3_2:82676907-82676926 Msa0430810:CDS 45.0%
AAAGCTGTTTGTTCAGGAGG+TGG + chr3_2:82676910-82676929 Msa0430810:CDS 45.0%
TATGAACGTATGCTTCGCAC+GGG + chr3_2:82677033-82677052 Msa0430810:CDS 45.0%
!! TGCATTCCTGGAAAGCATCT+GGG - chr3_2:82677843-82677862 None:intergenic 45.0%
!! TTGCATTCCTGGAAAGCATC+TGG - chr3_2:82677844-82677863 None:intergenic 45.0%
TGCCTCTAAACTCTTTGACG+TGG + chr3_2:82677940-82677959 Msa0430810:intron 45.0%
GCCTCTAAACTCTTTGACGT+GGG + chr3_2:82677941-82677960 Msa0430810:intron 45.0%
ACAATACAGGGAGATGTTGG+TGG - chr3_2:82678042-82678061 None:intergenic 45.0%
TCTCCCTGTATTGTTGAAGC+CGG + chr3_2:82678048-82678067 Msa0430810:CDS 45.0%
TTCTTCAATGGCCTTTGTGG+TGG + chr3_2:82678085-82678104 Msa0430810:CDS 45.0%
CCAAGTGGCAGTAAACAACA+TGG - chr3_2:82678123-82678142 None:intergenic 45.0%
! CCATGTTGTTTACTGCCACT+TGG + chr3_2:82678120-82678139 Msa0430810:CDS 45.0%
CAAGCTCAAGAGATACCAAG+TGG - chr3_2:82678138-82678157 None:intergenic 45.0%
GCCTGTTAAGGATTGTTTGG+GGG + chr3_2:82678192-82678211 Msa0430810:CDS 45.0%
TCCCCCAAACAATCCTTAAC+AGG - chr3_2:82678196-82678215 None:intergenic 45.0%
CATCTGCAGACTGACAAACA+GGG - chr3_2:82678273-82678292 None:intergenic 45.0%
TCATCTGCAGACTGACAAAC+AGG - chr3_2:82678274-82678293 None:intergenic 45.0%
GGAAGAAGAACTATGCGAGG+CGG + chr3_2:82676222-82676241 Msa0430810:CDS 50.0%
GAAATGAGTAACGTCGGCAC+CGG - chr3_2:82676290-82676309 None:intergenic 50.0%
GCCGACGTTACTCATTTCGA+CGG + chr3_2:82676292-82676311 Msa0430810:CDS 50.0%
GCCGTCGAAATGAGTAACGT+CGG - chr3_2:82676296-82676315 None:intergenic 50.0%
GTTACTCATTTCGACGGCGA+TGG + chr3_2:82676298-82676317 Msa0430810:CDS 50.0%
GAGAGAAGGATGTCGAGGAT+GGG - chr3_2:82676364-82676383 None:intergenic 50.0%
!! GAAGGAGAAAGAGCGTTCCA+AGG - chr3_2:82676397-82676416 None:intergenic 50.0%
TTGCATTGCGAAATCACCGG+CGG - chr3_2:82676428-82676447 None:intergenic 50.0%
! GCACCGACACTTCTAATGGA+AGG - chr3_2:82676657-82676676 None:intergenic 50.0%
ATGGGAGAAGCCATTGATGG+AGG + chr3_2:82676879-82676898 Msa0430810:CDS 50.0%
CTCAGGATGAGCCTCAACAA+TGG - chr3_2:82677010-82677029 None:intergenic 50.0%
CATTGTTGAGGCTCATCCTG+AGG + chr3_2:82677008-82677027 Msa0430810:CDS 50.0%
CTGTTTCCCAGATGCTTTCC+AGG + chr3_2:82677834-82677853 Msa0430810:intron 50.0%
GCCCACGTCAAAGAGTTTAG+AGG - chr3_2:82677945-82677964 None:intergenic 50.0%
CTCCCTGTATTGTTGAAGCC+GGG + chr3_2:82678049-82678068 Msa0430810:CDS 50.0%
CACCCGGCTTCAACAATACA+GGG - chr3_2:82678054-82678073 None:intergenic 50.0%
TTGGGGGAAGAAGTTTGGGA+AGG + chr3_2:82678208-82678227 Msa0430810:CDS 50.0%
GGAAGAAGAACTATGCGAGG+CGG + chr3_2:82676222-82676241 Msa0430810:CDS 50.0%
GAAATGAGTAACGTCGGCAC+CGG - chr3_2:82676290-82676309 None:intergenic 50.0%
GCCGACGTTACTCATTTCGA+CGG + chr3_2:82676292-82676311 Msa0430810:CDS 50.0%
GCCGTCGAAATGAGTAACGT+CGG - chr3_2:82676296-82676315 None:intergenic 50.0%
GTTACTCATTTCGACGGCGA+TGG + chr3_2:82676298-82676317 Msa0430810:CDS 50.0%
GAGAGAAGGATGTCGAGGAT+GGG - chr3_2:82676364-82676383 None:intergenic 50.0%
!! GAAGGAGAAAGAGCGTTCCA+AGG - chr3_2:82676397-82676416 None:intergenic 50.0%
TTGCATTGCGAAATCACCGG+CGG - chr3_2:82676428-82676447 None:intergenic 50.0%
! GCACCGACACTTCTAATGGA+AGG - chr3_2:82676657-82676676 None:intergenic 50.0%
ATGGGAGAAGCCATTGATGG+AGG + chr3_2:82676879-82676898 Msa0430810:CDS 50.0%
CTCAGGATGAGCCTCAACAA+TGG - chr3_2:82677010-82677029 None:intergenic 50.0%
CATTGTTGAGGCTCATCCTG+AGG + chr3_2:82677008-82677027 Msa0430810:CDS 50.0%
CTGTTTCCCAGATGCTTTCC+AGG + chr3_2:82677834-82677853 Msa0430810:intron 50.0%
GCCCACGTCAAAGAGTTTAG+AGG - chr3_2:82677945-82677964 None:intergenic 50.0%
CTCCCTGTATTGTTGAAGCC+GGG + chr3_2:82678049-82678068 Msa0430810:CDS 50.0%
CACCCGGCTTCAACAATACA+GGG - chr3_2:82678054-82678073 None:intergenic 50.0%
TTGGGGGAAGAAGTTTGGGA+AGG + chr3_2:82678208-82678227 Msa0430810:CDS 50.0%
CTATGCGAGGCGGCGATTAA+AGG + chr3_2:82676232-82676251 Msa0430810:CDS 55.0%
GGCGGCGATTAAAGGTGAGA+CGG + chr3_2:82676240-82676259 Msa0430810:CDS 55.0%
TGCTTTGCGGCGAGCATAAG+AGG - chr3_2:82676331-82676350 None:intergenic 55.0%
CTTATGCTCGCCGCAAAGCA+CGG + chr3_2:82676331-82676350 Msa0430810:CDS 55.0%
GGAGAGAAGGATGTCGAGGA+TGG - chr3_2:82676365-82676384 None:intergenic 55.0%
!! AAGAGCGTTCCAAGGAGCAC+CGG - chr3_2:82676389-82676408 None:intergenic 55.0%
TCTCCTTCCAACCTTTCCGC+CGG + chr3_2:82676409-82676428 Msa0430810:CDS 55.0%
GAAATCACCGGCGGAAAGGT+TGG - chr3_2:82676419-82676438 None:intergenic 55.0%
TTGCGAAATCACCGGCGGAA+AGG - chr3_2:82676423-82676442 None:intergenic 55.0%
GGCATGGGAGAAGCCATTGA+TGG + chr3_2:82676876-82676895 Msa0430810:CDS 55.0%
AACGTATGCTTCGCACGGGT+TGG + chr3_2:82677037-82677056 Msa0430810:CDS 55.0%
ACGTATGCTTCGCACGGGTT+GGG + chr3_2:82677038-82677057 Msa0430810:CDS 55.0%
GTCGTCATAGTACTCCCCGT+AGG - chr3_2:82678008-82678027 None:intergenic 55.0%
CCACCCGGCTTCAACAATAC+AGG - chr3_2:82678055-82678074 None:intergenic 55.0%
CCTGTATTGTTGAAGCCGGG+TGG + chr3_2:82678052-82678071 Msa0430810:CDS 55.0%
CTGCAGACTGACAAACAGGG+AGG - chr3_2:82678270-82678289 None:intergenic 55.0%
CTATGCGAGGCGGCGATTAA+AGG + chr3_2:82676232-82676251 Msa0430810:CDS 55.0%
GGCGGCGATTAAAGGTGAGA+CGG + chr3_2:82676240-82676259 Msa0430810:CDS 55.0%
TGCTTTGCGGCGAGCATAAG+AGG - chr3_2:82676331-82676350 None:intergenic 55.0%
CTTATGCTCGCCGCAAAGCA+CGG + chr3_2:82676331-82676350 Msa0430810:CDS 55.0%
GGAGAGAAGGATGTCGAGGA+TGG - chr3_2:82676365-82676384 None:intergenic 55.0%
!! AAGAGCGTTCCAAGGAGCAC+CGG - chr3_2:82676389-82676408 None:intergenic 55.0%
TCTCCTTCCAACCTTTCCGC+CGG + chr3_2:82676409-82676428 Msa0430810:CDS 55.0%
GAAATCACCGGCGGAAAGGT+TGG - chr3_2:82676419-82676438 None:intergenic 55.0%
TTGCGAAATCACCGGCGGAA+AGG - chr3_2:82676423-82676442 None:intergenic 55.0%
GGCATGGGAGAAGCCATTGA+TGG + chr3_2:82676876-82676895 Msa0430810:CDS 55.0%
AACGTATGCTTCGCACGGGT+TGG + chr3_2:82677037-82677056 Msa0430810:CDS 55.0%
ACGTATGCTTCGCACGGGTT+GGG + chr3_2:82677038-82677057 Msa0430810:CDS 55.0%
GTCGTCATAGTACTCCCCGT+AGG - chr3_2:82678008-82678027 None:intergenic 55.0%
CCACCCGGCTTCAACAATAC+AGG - chr3_2:82678055-82678074 None:intergenic 55.0%
CCTGTATTGTTGAAGCCGGG+TGG + chr3_2:82678052-82678071 Msa0430810:CDS 55.0%
CTGCAGACTGACAAACAGGG+AGG - chr3_2:82678270-82678289 None:intergenic 55.0%
GGATGTCGAGGATGGGTGCA+TGG - chr3_2:82676357-82676376 None:intergenic 60.0%
CTCGACATCCTTCTCTCCGC+CGG + chr3_2:82676367-82676386 Msa0430810:CDS 60.0%
TCACCGGCGGAAAGGTTGGA+AGG - chr3_2:82676415-82676434 None:intergenic 60.0%
! CGTATGCTTCGCACGGGTTG+GGG + chr3_2:82677039-82677058 Msa0430810:CDS 60.0%
GGATGTCGAGGATGGGTGCA+TGG - chr3_2:82676357-82676376 None:intergenic 60.0%
CTCGACATCCTTCTCTCCGC+CGG + chr3_2:82676367-82676386 Msa0430810:CDS 60.0%
TCACCGGCGGAAAGGTTGGA+AGG - chr3_2:82676415-82676434 None:intergenic 60.0%
! CGTATGCTTCGCACGGGTTG+GGG + chr3_2:82677039-82677058 Msa0430810:CDS 60.0%
GGGTGCATGGCCGTGCTTTG+CGG - chr3_2:82676344-82676363 None:intergenic 65.0%
CGGCGGAGAGAAGGATGTCG+AGG - chr3_2:82676369-82676388 None:intergenic 65.0%
!! AAGGAGCACCGGCGGAGAGA+AGG - chr3_2:82676378-82676397 None:intergenic 65.0%
TTCTCTCCGCCGGTGCTCCT+TGG + chr3_2:82676377-82676396 Msa0430810:CDS 65.0%
!! AGCGTTCCAAGGAGCACCGG+CGG - chr3_2:82676386-82676405 None:intergenic 65.0%
!! TCGCACGGGTTGGGGTGAGA+AGG + chr3_2:82677047-82677066 Msa0430810:CDS 65.0%
GGGTGCATGGCCGTGCTTTG+CGG - chr3_2:82676344-82676363 None:intergenic 65.0%
CGGCGGAGAGAAGGATGTCG+AGG - chr3_2:82676369-82676388 None:intergenic 65.0%
!! AAGGAGCACCGGCGGAGAGA+AGG - chr3_2:82676378-82676397 None:intergenic 65.0%
TTCTCTCCGCCGGTGCTCCT+TGG + chr3_2:82676377-82676396 Msa0430810:CDS 65.0%
!! AGCGTTCCAAGGAGCACCGG+CGG - chr3_2:82676386-82676405 None:intergenic 65.0%
!! TCGCACGGGTTGGGGTGAGA+AGG + chr3_2:82677047-82677066 Msa0430810:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 82676169 82678530 82676169 ID=Msa0430810;Name=Msa0430810
chr3_2 mRNA 82676169 82678530 82676169 ID=Msa0430810-mRNA-1;Parent=Msa0430810;Name=Msa0430810-mRNA-1;_AED=0.01;_eAED=0.01;_QI=48|1|1|1|1|1|3|227|326
chr3_2 exon 82676169 82676487 82676169 ID=Msa0430810-mRNA-1:exon:22943;Parent=Msa0430810-mRNA-1
chr3_2 exon 82676737 82677132 82676737 ID=Msa0430810-mRNA-1:exon:22944;Parent=Msa0430810-mRNA-1
chr3_2 exon 82677990 82678530 82677990 ID=Msa0430810-mRNA-1:exon:22945;Parent=Msa0430810-mRNA-1
chr3_2 five_prime_UTR 82676169 82676216 82676169 ID=Msa0430810-mRNA-1:five_prime_utr;Parent=Msa0430810-mRNA-1
chr3_2 CDS 82676217 82676487 82676217 ID=Msa0430810-mRNA-1:cds;Parent=Msa0430810-mRNA-1
chr3_2 CDS 82676737 82677132 82676737 ID=Msa0430810-mRNA-1:cds;Parent=Msa0430810-mRNA-1
chr3_2 CDS 82677990 82678303 82677990 ID=Msa0430810-mRNA-1:cds;Parent=Msa0430810-mRNA-1
chr3_2 three_prime_UTR 82678304 82678530 82678304 ID=Msa0430810-mRNA-1:three_prime_utr;Parent=Msa0430810-mRNA-1
Gene Sequence

>Msa0430810

ATGAAGGAAGAAGAACTATGCGAGGCGGCGATTAAAGGTGAGACGGAGAAGGTAAAGTCTATTATTGACTCCGGTGCCGACGTTACTCATTTCGACGGCGATGGTCTCACTCCTCTTATGCTCGCCGCAAAGCACGGCCATGCACCCATCCTCGACATCCTTCTCTCCGCCGGTGCTCCTTGGAACGCTCTTTCTCCTTCCAACCTTTCCGCCGGTGATTTCGCAATGCAAGAAGGTCACCAAGAAGCTTATGAGCTTCTTCTCAATGCTGGTATTCGATCTGAATTAGTGTTGGGAACAATTGCTAGGAAGGAAAAGAAAAGCACTGATTCCGGTTATGATTATTTGGAAGATAGGGTAAGTTTTAGTGAAGATAAAGTAATGGATTCTGAGAGTAAAGCTGTGATGATGGCATGGGAGAAGCCATTGATGGAGGCTCATGCTAAAGCTGTTTGTTCAGGAGGTGGTCATGTACTCAATATTGGATTTGGAATGGGTCTTGTTGATACAGCTATACAACAATATTCACCTGTGAAACATACCATTGTTGAGGCTCATCCTGAGGTTTATGAACGTATGCTTCGCACGGGTTGGGGTGAGAAGGAAAATGTTCAGATCATTTTTGGTCGTTGGCAAGATGTCCTGTCTCAGCTTGAAACATATGATGGGATATTCTTTGACACCTACGGGGAGTACTATGACGACTTGAGAGAGTTCCACCAACATCTCCCTGTATTGTTGAAGCCGGGTGGAATATACTCTTTCTTCAATGGCCTTTGTGGTGGTAATGCATTTTTCCATGTTGTTTACTGCCACTTGGTATCTCTTGAGCTTGAGAATTTGGGGTATTCCACACAATTAATTCCATTGCCTGTTAAGGATTGTTTGGGGGAAGAAGTTTGGGAAGGTGTCAAACACAGATACTGGCAGCTTGATACATACTACCTCCCTGTTTGTCAGTCTGCAGATGACTCTGAGTGA
Protein sequence

>Msa0430810

MKEEELCEAAIKGETEKVKSIIDSGADVTHFDGDGLTPLMLAAKHGHAPILDILLSAGAPWNALSPSNLSAGDFAMQEGHQEAYELLLNAGIRSELVLGTIARKEKKSTDSGYDYLEDRVSFSEDKVMDSESKAVMMAWEKPLMEAHAKAVCSGGGHVLNIGFGMGLVDTAIQQYSPVKHTIVEAHPEVYERMLRTGWGEKENVQIIFGRWQDVLSQLETYDGIFFDTYGEYYDDLREFHQHLPVLLKPGGIYSFFNGLCGGNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEEVWEGVKHRYWQLDTYYLPVCQSADDSE*