AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1445770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445770 MtrunA17_Chr3g0134611 98.160 326 6 0 1 326 1 326 0.0 664
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445770 AT5G65860.2 75.155 322 78 1 4 323 5 326 0.0 527
Msa1445770 AT5G65860.1 75.155 322 78 1 4 323 25 346 0.0 527
Msa1445770 AT5G65860.3 75.155 322 78 1 4 323 5 326 0.0 527

Find 106 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTCTTGAGCTTGAGAATT+TGG 0.148087 tig0031177:+8353 Msa1445770:CDS
TGATTCCGGTTATGATTATT+TGG 0.213704 tig0031177:+7001 Msa1445770:CDS
CATGTACTCAATATTGGATT+TGG 0.261666 tig0031177:+7143 Msa1445770:CDS
TCTCTTGAGCTTGAGAATTT+GGG 0.285212 tig0031177:+8354 Msa1445770:CDS
ATTGCCTGTTAAGGATTGTT+TGG 0.285893 tig0031177:+8398 Msa1445770:CDS
TTGCCTGTTAAGGATTGTTT+GGG 0.287460 tig0031177:+8399 Msa1445770:CDS
CTATGCGAGGCGGCGATTAA+AGG 0.287831 tig0031177:+6441 Msa1445770:CDS
GAAGAAGCTCATAAGCTTCT+TGG 0.296988 tig0031177:-6665 None:intergenic
GTTATGATTATTTGGAAGAT+AGG 0.317017 tig0031177:+7009 Msa1445770:CDS
TTCTCTCCGCCGGTGCTCCT+TGG 0.327627 tig0031177:+6586 Msa1445770:CDS
ACGTATGCTTCGCACGGGTT+GGG 0.340731 tig0031177:+7247 Msa1445770:CDS
TCTTTCTTCAATGGCCTTTG+TGG 0.351869 tig0031177:+8291 Msa1445770:CDS
ATTAATTCCATTGCCTGTTA+AGG 0.360892 tig0031177:+8389 Msa1445770:CDS
CATGCTAAAGCTGTTTGTTC+AGG 0.364371 tig0031177:+7113 Msa1445770:CDS
GGTGGTCATGTACTCAATAT+TGG 0.375114 tig0031177:+7137 Msa1445770:CDS
CTCAATATTGGATTTGGAAT+GGG 0.395612 tig0031177:+7149 Msa1445770:CDS
GGAATATACTCTTTCTTCAA+TGG 0.395895 tig0031177:+8282 Msa1445770:CDS
TCATCTGCAGACTGACAAAC+AGG 0.396199 tig0031177:-8480 None:intergenic
AACGTATGCTTCGCACGGGT+TGG 0.424986 tig0031177:+7246 Msa1445770:CDS
TGCTTTGCGGCGAGCATAAG+AGG 0.429396 tig0031177:-6537 None:intergenic
ATCTTCCAAATAATCATAAC+CGG 0.430063 tig0031177:-7006 None:intergenic
GAAAAGAAAAGCACTGATTC+CGG 0.430789 tig0031177:+6987 Msa1445770:CDS
ATTGTTGCTTGTGTAACTTA+TGG 0.433260 tig0031177:+8577 Msa1445770:three_prime_UTR
CCATGTTGTTTACTGCCACT+TGG 0.440964 tig0031177:+8329 Msa1445770:CDS
TATGGTATTTGTAAGAGAAC+AGG 0.442003 tig0031177:+8595 Msa1445770:three_prime_UTR
CGTATGCTTCGCACGGGTTG+GGG 0.445579 tig0031177:+7248 Msa1445770:CDS
GGGATATTCTTTGACACCTA+CGG 0.456919 tig0031177:+8198 Msa1445770:intron
AATTATGAGCTTAGTGTACA+TGG 0.459923 tig0031177:+8714 Msa1445770:three_prime_UTR
TTAGCATGAGCCTCCATCAA+TGG 0.470308 tig0031177:-7098 None:intergenic
GGGTGCATGGCCGTGCTTTG+CGG 0.480399 tig0031177:-6550 None:intergenic
ATTCGATCTGAATTAGTGTT+GGG 0.480443 tig0031177:+6948 Msa1445770:CDS
CCACCCGGCTTCAACAATAC+AGG 0.482020 tig0031177:-8261 None:intergenic
GGATATTCTTTGACACCTAC+GGG 0.485801 tig0031177:+8199 Msa1445770:CDS
ACTCAATATTGGATTTGGAA+TGG 0.488555 tig0031177:+7148 Msa1445770:CDS
TATGAGCTTCTTCTCAATGC+TGG 0.492065 tig0031177:+6675 Msa1445770:CDS
TTCTTCAATGGCCTTTGTGG+TGG 0.493941 tig0031177:+8294 Msa1445770:CDS
GTTGGGAACAATTGCTAGGA+AGG 0.504005 tig0031177:+6965 Msa1445770:CDS
TTATGATTATTTGGAAGATA+GGG 0.505378 tig0031177:+7010 Msa1445770:CDS
GGAGAGAAGGATGTCGAGGA+TGG 0.507596 tig0031177:-6571 None:intergenic
CTCGACATCCTTCTCTCCGC+CGG 0.511422 tig0031177:+6576 Msa1445770:CDS
TCAACAATGGTATGTTTCAC+AGG 0.511587 tig0031177:-7203 None:intergenic
AAGGTGTCAAACACAGATAC+TGG 0.517912 tig0031177:+8436 Msa1445770:CDS
TCTCCCTGTATTGTTGAAGC+CGG 0.518751 tig0031177:+8257 Msa1445770:CDS
GGCATGGGAGAAGCCATTGA+TGG 0.521455 tig0031177:+7085 Msa1445770:CDS
TATTCGATCTGAATTAGTGT+TGG 0.521798 tig0031177:+6947 Msa1445770:CDS
CATATGTTTCAAGCTGAGAC+AGG 0.523440 tig0031177:-7316 None:intergenic
TCTCCTTCCAACCTTTCCGC+CGG 0.523539 tig0031177:+6618 Msa1445770:CDS
CTCTTGAGCTTGAGAATTTG+GGG 0.525010 tig0031177:+8355 Msa1445770:CDS
AAACAATCCTTAACAGGCAA+TGG 0.525589 tig0031177:-8396 None:intergenic
CTCCCTGTATTGTTGAAGCC+GGG 0.525798 tig0031177:+8258 Msa1445770:CDS
GTTACTCATTTCGACGGCGA+TGG 0.526133 tig0031177:+6507 Msa1445770:CDS
TTAGAGTGGCGCAAAGATGA+AGG 0.530591 tig0031177:+6410 Msa1445770:exon
AAAGCTGTTTGTTCAGGAGG+TGG 0.540005 tig0031177:+7119 Msa1445770:CDS
AAGGAGCACCGGCGGAGAGA+AGG 0.543782 tig0031177:-6584 None:intergenic
TAGTGTTGGGAACAATTGCT+AGG 0.547152 tig0031177:+6961 Msa1445770:CDS
AGCATACGTTCATAAACCTC+AGG 0.548913 tig0031177:-7233 None:intergenic
GCTAAAGCTGTTTGTTCAGG+AGG 0.553788 tig0031177:+7116 Msa1445770:CDS
TCTCAGCTTGAAACATATGA+TGG 0.557266 tig0031177:+7320 Msa1445770:CDS
TCAACAATACAGGGAGATGT+TGG 0.557688 tig0031177:-8251 None:intergenic
TTGCGAAATCACCGGCGGAA+AGG 0.562943 tig0031177:-6629 None:intergenic
GGATGTCGAGGATGGGTGCA+TGG 0.563108 tig0031177:-6563 None:intergenic
GAAATGAGTAACGTCGGCAC+CGG 0.571997 tig0031177:-6496 None:intergenic
GATTAAAGGTGAGACGGAGA+AGG 0.572642 tig0031177:+6455 Msa1445770:CDS
CTTATGCTCGCCGCAAAGCA+CGG 0.574060 tig0031177:+6540 Msa1445770:CDS
GCCGACGTTACTCATTTCGA+CGG 0.576572 tig0031177:+6501 Msa1445770:CDS
GAGAGAAGGATGTCGAGGAT+GGG 0.580848 tig0031177:-6570 None:intergenic
GAAATCACCGGCGGAAAGGT+TGG 0.582456 tig0031177:-6625 None:intergenic
TTCTTGCATTGCGAAATCAC+CGG 0.583608 tig0031177:-6637 None:intergenic
AAGAGCGTTCCAAGGAGCAC+CGG 0.584379 tig0031177:-6595 None:intergenic
CACCCGGCTTCAACAATACA+GGG 0.584983 tig0031177:-8260 None:intergenic
ACAATACAGGGAGATGTTGG+TGG 0.586371 tig0031177:-8248 None:intergenic
GTAAAGTCTATTATTGACTC+CGG 0.590503 tig0031177:+6477 Msa1445770:CDS
GAAGGAGAAAGAGCGTTCCA+AGG 0.591032 tig0031177:-6603 None:intergenic
TCGCACGGGTTGGGGTGAGA+AGG 0.593861 tig0031177:+7256 Msa1445770:CDS
CATTGTTGAGGCTCATCCTG+AGG 0.595016 tig0031177:+7217 Msa1445770:CDS
AGCGTTCCAAGGAGCACCGG+CGG 0.601767 tig0031177:-6592 None:intergenic
TGAGAGTAAAGCTGTGATGA+TGG 0.605332 tig0031177:+7064 Msa1445770:CDS
TATGAACGTATGCTTCGCAC+GGG 0.607053 tig0031177:+7242 Msa1445770:CDS
TCACCGGCGGAAAGGTTGGA+AGG 0.609268 tig0031177:-6621 None:intergenic
CCAAGTGGCAGTAAACAACA+TGG 0.611294 tig0031177:-8329 None:intergenic
GGTGATTTCGCAATGCAAGA+AGG 0.613606 tig0031177:+6639 Msa1445770:CDS
TTATGAACGTATGCTTCGCA+CGG 0.616186 tig0031177:+7241 Msa1445770:CDS
CCTGTATTGTTGAAGCCGGG+TGG 0.618155 tig0031177:+8261 Msa1445770:CDS
GTAAAGCTGTGATGATGGCA+TGG 0.618846 tig0031177:+7069 Msa1445770:CDS
CGGCGGAGAGAAGGATGTCG+AGG 0.626647 tig0031177:-6575 None:intergenic
AAGAAAGAGTATATTCCACC+CGG 0.629337 tig0031177:-8276 None:intergenic
TGCCTGTTAAGGATTGTTTG+GGG 0.632646 tig0031177:+8400 Msa1445770:CDS
GGCGGCGATTAAAGGTGAGA+CGG 0.637047 tig0031177:+6449 Msa1445770:CDS
ATGGGAGAAGCCATTGATGG+AGG 0.639979 tig0031177:+7088 Msa1445770:CDS
GCCTGTTAAGGATTGTTTGG+GGG 0.641124 tig0031177:+8401 Msa1445770:CDS
AGGCAATGGAATTAATTGTG+TGG 0.643792 tig0031177:-8382 None:intergenic
GAAGGAAGAAGAACTATGCG+AGG 0.647053 tig0031177:+6428 Msa1445770:CDS
CTCAGGATGAGCCTCAACAA+TGG 0.655173 tig0031177:-7216 None:intergenic
TGTGAAACATACCATTGTTG+AGG 0.661097 tig0031177:+7205 Msa1445770:CDS
ATTATGAGCTTAGTGTACAT+GGG 0.665478 tig0031177:+8715 Msa1445770:three_prime_UTR
AATGCTGAGTAAGCTTAGAG+TGG 0.673677 tig0031177:+6396 Msa1445770:five_prime_UTR
TAAAGCTGTGATGATGGCAT+GGG 0.687762 tig0031177:+7070 Msa1445770:CDS
TTGCATTGCGAAATCACCGG+CGG 0.690041 tig0031177:-6634 None:intergenic
AAAATGCATTACCACCACAA+AGG 0.694739 tig0031177:-8305 None:intergenic
CAAGCTCAAGAGATACCAAG+TGG 0.699247 tig0031177:-8344 None:intergenic
GCCGTCGAAATGAGTAACGT+CGG 0.710374 tig0031177:-6502 None:intergenic
GGAAGAAGAACTATGCGAGG+CGG 0.711413 tig0031177:+6431 Msa1445770:CDS
CATCTGCAGACTGACAAACA+GGG 0.712802 tig0031177:-8479 None:intergenic
GTCGTCATAGTACTCCCCGT+AGG 0.723736 tig0031177:-8214 None:intergenic
GATATTCTTTGACACCTACG+GGG 0.737280 tig0031177:+8200 Msa1445770:CDS
CTGCAGACTGACAAACAGGG+AGG 0.782216 tig0031177:-8476 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCAAAATTTTATTACAT+TGG + tig0031177:8645-8664 Msa1445770:three_prime_UTR 10.0%
!!! TTTCAAAATTTTATTACATT+GGG + tig0031177:8646-8665 Msa1445770:three_prime_UTR 10.0%
!!! ATTTCAAAATTTTATTACAT+TGG + tig0031177:8645-8664 Msa1445770:three_prime_UTR 10.0%
!!! TTTCAAAATTTTATTACATT+GGG + tig0031177:8646-8665 Msa1445770:three_prime_UTR 10.0%
!! AAAAAGAAAATCAAAACAAA+TGG - tig0031177:8176-8195 None:intergenic 15.0%
!! AAAAAGAAAATCAAAACAAA+TGG - tig0031177:8176-8195 None:intergenic 15.0%
!!! TCATTTTCACAAATTATTAC+CGG - tig0031177:6773-6792 None:intergenic 20.0%
!!! TTTGTGTATTTTACTTTGTT+AGG + tig0031177:6924-6943 Msa1445770:intron 20.0%
!! TTATGATTATTTGGAAGATA+GGG + tig0031177:7010-7029 Msa1445770:CDS 20.0%
!!! TTTTAGTGAAGATAAAGTAA+TGG + tig0031177:7037-7056 Msa1445770:CDS 20.0%
!!! AATAGAATTGATTTCGTAAA+AGG + tig0031177:7472-7491 Msa1445770:intron 20.0%
!! AACTTAAATACAAATGCTTA+TGG + tig0031177:7499-7518 Msa1445770:intron 20.0%
!! TAAAAAAAAACAGCAGTAAT+AGG + tig0031177:7629-7648 Msa1445770:intron 20.0%
!! AAAAAAAAACAGCAGTAATA+GGG + tig0031177:7630-7649 Msa1445770:intron 20.0%
!!! TTGTTTTGATTTTCTTTTTC+AGG + tig0031177:8177-8196 Msa1445770:intron 20.0%
!!! TGTTTTGATTTTCTTTTTCA+GGG + tig0031177:8178-8197 Msa1445770:intron 20.0%
!!! GATTTTTTAGTTTTGAATGT+AGG + tig0031177:8511-8530 Msa1445770:exon 20.0%
!!! TCATTTTCACAAATTATTAC+CGG - tig0031177:6773-6792 None:intergenic 20.0%
!!! TTTGTGTATTTTACTTTGTT+AGG + tig0031177:6924-6943 Msa1445770:intron 20.0%
!! TTATGATTATTTGGAAGATA+GGG + tig0031177:7010-7029 Msa1445770:CDS 20.0%
!!! TTTTAGTGAAGATAAAGTAA+TGG + tig0031177:7037-7056 Msa1445770:CDS 20.0%
!!! AATAGAATTGATTTCGTAAA+AGG + tig0031177:7472-7491 Msa1445770:intron 20.0%
!! AACTTAAATACAAATGCTTA+TGG + tig0031177:7499-7518 Msa1445770:intron 20.0%
!! TAAAAAAAAACAGCAGTAAT+AGG + tig0031177:7629-7648 Msa1445770:intron 20.0%
!! AAAAAAAAACAGCAGTAATA+GGG + tig0031177:7630-7649 Msa1445770:intron 20.0%
!!! TTGTTTTGATTTTCTTTTTC+AGG + tig0031177:8177-8196 Msa1445770:intron 20.0%
!!! TGTTTTGATTTTCTTTTTCA+GGG + tig0031177:8178-8197 Msa1445770:intron 20.0%
!!! GATTTTTTAGTTTTGAATGT+AGG + tig0031177:8511-8530 Msa1445770:exon 20.0%
! TGTTTAACACTAACATGTAT+TGG + tig0031177:6834-6853 Msa1445770:intron 25.0%
! ATCTTCCAAATAATCATAAC+CGG - tig0031177:7009-7028 None:intergenic 25.0%
! GTTATGATTATTTGGAAGAT+AGG + tig0031177:7009-7028 Msa1445770:CDS 25.0%
!! GAAAATGTTCAGATCATTTT+TGG + tig0031177:7278-7297 Msa1445770:CDS 25.0%
! TTTCACAAAGGAAAAAACTT+AGG - tig0031177:7670-7689 None:intergenic 25.0%
! TTTCCTTTGTGAAATTTATG+TGG + tig0031177:7676-7695 Msa1445770:intron 25.0%
! TAACCACATAAATTTCACAA+AGG - tig0031177:7682-7701 None:intergenic 25.0%
!! TGGTTACAATTTAGTTTCTA+AGG + tig0031177:7696-7715 Msa1445770:intron 25.0%
!! GGTTACAATTTAGTTTCTAA+GGG + tig0031177:7697-7716 Msa1445770:intron 25.0%
! ATTAAAAGTAGCATCTATGT+TGG - tig0031177:7793-7812 None:intergenic 25.0%
!! TCTAATCAAACTAAGTATTG+AGG + tig0031177:7817-7836 Msa1445770:intron 25.0%
! TTAGTGAAAATACATGTCTT+TGG - tig0031177:7868-7887 None:intergenic 25.0%
!!! AAGTGTTTTTGTTTTATCAG+TGG - tig0031177:7931-7950 None:intergenic 25.0%
! TTACTTAATGTTAAAAAGCC+AGG + tig0031177:7949-7968 Msa1445770:intron 25.0%
! TTTGCTTATGTGAAAAACAT+AGG + tig0031177:8075-8094 Msa1445770:intron 25.0%
! TTGCTTATGTGAAAAACATA+GGG + tig0031177:8076-8095 Msa1445770:intron 25.0%
! TGTTTAACACTAACATGTAT+TGG + tig0031177:6834-6853 Msa1445770:intron 25.0%
! ATCTTCCAAATAATCATAAC+CGG - tig0031177:7009-7028 None:intergenic 25.0%
! GTTATGATTATTTGGAAGAT+AGG + tig0031177:7009-7028 Msa1445770:CDS 25.0%
!! GAAAATGTTCAGATCATTTT+TGG + tig0031177:7278-7297 Msa1445770:CDS 25.0%
! TTTCACAAAGGAAAAAACTT+AGG - tig0031177:7670-7689 None:intergenic 25.0%
! TTTCCTTTGTGAAATTTATG+TGG + tig0031177:7676-7695 Msa1445770:intron 25.0%
! TAACCACATAAATTTCACAA+AGG - tig0031177:7682-7701 None:intergenic 25.0%
!! TGGTTACAATTTAGTTTCTA+AGG + tig0031177:7696-7715 Msa1445770:intron 25.0%
!! GGTTACAATTTAGTTTCTAA+GGG + tig0031177:7697-7716 Msa1445770:intron 25.0%
! ATTAAAAGTAGCATCTATGT+TGG - tig0031177:7793-7812 None:intergenic 25.0%
!! TCTAATCAAACTAAGTATTG+AGG + tig0031177:7817-7836 Msa1445770:intron 25.0%
! TTAGTGAAAATACATGTCTT+TGG - tig0031177:7868-7887 None:intergenic 25.0%
!!! AAGTGTTTTTGTTTTATCAG+TGG - tig0031177:7931-7950 None:intergenic 25.0%
! TTACTTAATGTTAAAAAGCC+AGG + tig0031177:7949-7968 Msa1445770:intron 25.0%
! TTTGCTTATGTGAAAAACAT+AGG + tig0031177:8075-8094 Msa1445770:intron 25.0%
! TTGCTTATGTGAAAAACATA+GGG + tig0031177:8076-8095 Msa1445770:intron 25.0%
!! GTAAAGTCTATTATTGACTC+CGG + tig0031177:6477-6496 Msa1445770:CDS 30.0%
ATAGTTAATTAGACACAGAG+TGG - tig0031177:6714-6733 None:intergenic 30.0%
TATTCGATCTGAATTAGTGT+TGG + tig0031177:6947-6966 Msa1445770:CDS 30.0%
ATTCGATCTGAATTAGTGTT+GGG + tig0031177:6948-6967 Msa1445770:CDS 30.0%
TGATTCCGGTTATGATTATT+TGG + tig0031177:7001-7020 Msa1445770:CDS 30.0%
CATGTACTCAATATTGGATT+TGG + tig0031177:7143-7162 Msa1445770:CDS 30.0%
ACTCAATATTGGATTTGGAA+TGG + tig0031177:7148-7167 Msa1445770:CDS 30.0%
! CTCAATATTGGATTTGGAAT+GGG + tig0031177:7149-7168 Msa1445770:CDS 30.0%
TGCTGAAATTAAACATGTAC+TGG - tig0031177:7387-7406 None:intergenic 30.0%
ATTTCAGCACTAGAATTGAT+TGG + tig0031177:7398-7417 Msa1445770:intron 30.0%
TTTCAGCACTAGAATTGATT+GGG + tig0031177:7399-7418 Msa1445770:intron 30.0%
TAAGGGAAGTTGTTTATGAT+TGG + tig0031177:7714-7733 Msa1445770:intron 30.0%
! TACTATTTTGCAACGGTATT+TGG + tig0031177:8001-8020 Msa1445770:intron 30.0%
TTATGTGAAAAACATAGGGA+AGG + tig0031177:8080-8099 Msa1445770:intron 30.0%
GGAATATACTCTTTCTTCAA+TGG + tig0031177:8282-8301 Msa1445770:CDS 30.0%
ATTAATTCCATTGCCTGTTA+AGG + tig0031177:8389-8408 Msa1445770:CDS 30.0%
! ATTGTTGCTTGTGTAACTTA+TGG + tig0031177:8577-8596 Msa1445770:three_prime_UTR 30.0%
TATGGTATTTGTAAGAGAAC+AGG + tig0031177:8595-8614 Msa1445770:three_prime_UTR 30.0%
AATTATGAGCTTAGTGTACA+TGG + tig0031177:8714-8733 Msa1445770:three_prime_UTR 30.0%
ATTATGAGCTTAGTGTACAT+GGG + tig0031177:8715-8734 Msa1445770:three_prime_UTR 30.0%
!! GTAAAGTCTATTATTGACTC+CGG + tig0031177:6477-6496 Msa1445770:CDS 30.0%
ATAGTTAATTAGACACAGAG+TGG - tig0031177:6714-6733 None:intergenic 30.0%
TATTCGATCTGAATTAGTGT+TGG + tig0031177:6947-6966 Msa1445770:CDS 30.0%
ATTCGATCTGAATTAGTGTT+GGG + tig0031177:6948-6967 Msa1445770:CDS 30.0%
TGATTCCGGTTATGATTATT+TGG + tig0031177:7001-7020 Msa1445770:CDS 30.0%
CATGTACTCAATATTGGATT+TGG + tig0031177:7143-7162 Msa1445770:CDS 30.0%
ACTCAATATTGGATTTGGAA+TGG + tig0031177:7148-7167 Msa1445770:CDS 30.0%
! CTCAATATTGGATTTGGAAT+GGG + tig0031177:7149-7168 Msa1445770:CDS 30.0%
TGCTGAAATTAAACATGTAC+TGG - tig0031177:7387-7406 None:intergenic 30.0%
ATTTCAGCACTAGAATTGAT+TGG + tig0031177:7398-7417 Msa1445770:intron 30.0%
TTTCAGCACTAGAATTGATT+GGG + tig0031177:7399-7418 Msa1445770:intron 30.0%
TAAGGGAAGTTGTTTATGAT+TGG + tig0031177:7714-7733 Msa1445770:intron 30.0%
! TACTATTTTGCAACGGTATT+TGG + tig0031177:8001-8020 Msa1445770:intron 30.0%
TTATGTGAAAAACATAGGGA+AGG + tig0031177:8080-8099 Msa1445770:intron 30.0%
GGAATATACTCTTTCTTCAA+TGG + tig0031177:8282-8301 Msa1445770:CDS 30.0%
ATTAATTCCATTGCCTGTTA+AGG + tig0031177:8389-8408 Msa1445770:CDS 30.0%
! ATTGTTGCTTGTGTAACTTA+TGG + tig0031177:8577-8596 Msa1445770:three_prime_UTR 30.0%
TATGGTATTTGTAAGAGAAC+AGG + tig0031177:8595-8614 Msa1445770:three_prime_UTR 30.0%
AATTATGAGCTTAGTGTACA+TGG + tig0031177:8714-8733 Msa1445770:three_prime_UTR 30.0%
ATTATGAGCTTAGTGTACAT+GGG + tig0031177:8715-8734 Msa1445770:three_prime_UTR 30.0%
!! GAAAAGAAAAGCACTGATTC+CGG + tig0031177:6987-7006 Msa1445770:CDS 35.0%
TCAACAATGGTATGTTTCAC+AGG - tig0031177:7206-7225 None:intergenic 35.0%
TGTGAAACATACCATTGTTG+AGG + tig0031177:7205-7224 Msa1445770:CDS 35.0%
!!! TTCAGATCATTTTTGGTCGT+TGG + tig0031177:7285-7304 Msa1445770:CDS 35.0%
TCTCAGCTTGAAACATATGA+TGG + tig0031177:7320-7339 Msa1445770:CDS 35.0%
TCACTAACATCACAGTTGAT+AGG + tig0031177:7881-7900 Msa1445770:intron 35.0%
TCAGTGGATAGTATCAGAAT+TGG - tig0031177:7915-7934 None:intergenic 35.0%
! TGTGAGCTACTATTTTGCAA+CGG + tig0031177:7994-8013 Msa1445770:intron 35.0%
ATAAGCAAAACTTGCATTCC+TGG - tig0031177:8064-8083 None:intergenic 35.0%
GTTTGTTTGATTGTAATGCC+TGG + tig0031177:8109-8128 Msa1445770:intron 35.0%
TAATGCCTGGTAATTGTAAC+TGG + tig0031177:8122-8141 Msa1445770:intron 35.0%
ACAATCCAGTTACAATTACC+AGG - tig0031177:8130-8149 None:intergenic 35.0%
! AAGAAAGAGTATATTCCACC+CGG - tig0031177:8279-8298 None:intergenic 35.0%
AAAATGCATTACCACCACAA+AGG - tig0031177:8308-8327 None:intergenic 35.0%
ATCTCTTGAGCTTGAGAATT+TGG + tig0031177:8353-8372 Msa1445770:CDS 35.0%
TCTCTTGAGCTTGAGAATTT+GGG + tig0031177:8354-8373 Msa1445770:CDS 35.0%
AGGCAATGGAATTAATTGTG+TGG - tig0031177:8385-8404 None:intergenic 35.0%
AAACAATCCTTAACAGGCAA+TGG - tig0031177:8399-8418 None:intergenic 35.0%
ATTGCCTGTTAAGGATTGTT+TGG + tig0031177:8398-8417 Msa1445770:CDS 35.0%
TTGCCTGTTAAGGATTGTTT+GGG + tig0031177:8399-8418 Msa1445770:CDS 35.0%
!! GAAAAGAAAAGCACTGATTC+CGG + tig0031177:6987-7006 Msa1445770:CDS 35.0%
TCAACAATGGTATGTTTCAC+AGG - tig0031177:7206-7225 None:intergenic 35.0%
TGTGAAACATACCATTGTTG+AGG + tig0031177:7205-7224 Msa1445770:CDS 35.0%
!!! TTCAGATCATTTTTGGTCGT+TGG + tig0031177:7285-7304 Msa1445770:CDS 35.0%
TCTCAGCTTGAAACATATGA+TGG + tig0031177:7320-7339 Msa1445770:CDS 35.0%
TCACTAACATCACAGTTGAT+AGG + tig0031177:7881-7900 Msa1445770:intron 35.0%
TCAGTGGATAGTATCAGAAT+TGG - tig0031177:7915-7934 None:intergenic 35.0%
! TGTGAGCTACTATTTTGCAA+CGG + tig0031177:7994-8013 Msa1445770:intron 35.0%
ATAAGCAAAACTTGCATTCC+TGG - tig0031177:8064-8083 None:intergenic 35.0%
GTTTGTTTGATTGTAATGCC+TGG + tig0031177:8109-8128 Msa1445770:intron 35.0%
TAATGCCTGGTAATTGTAAC+TGG + tig0031177:8122-8141 Msa1445770:intron 35.0%
ACAATCCAGTTACAATTACC+AGG - tig0031177:8130-8149 None:intergenic 35.0%
! AAGAAAGAGTATATTCCACC+CGG - tig0031177:8279-8298 None:intergenic 35.0%
AAAATGCATTACCACCACAA+AGG - tig0031177:8308-8327 None:intergenic 35.0%
ATCTCTTGAGCTTGAGAATT+TGG + tig0031177:8353-8372 Msa1445770:CDS 35.0%
TCTCTTGAGCTTGAGAATTT+GGG + tig0031177:8354-8373 Msa1445770:CDS 35.0%
AGGCAATGGAATTAATTGTG+TGG - tig0031177:8385-8404 None:intergenic 35.0%
AAACAATCCTTAACAGGCAA+TGG - tig0031177:8399-8418 None:intergenic 35.0%
ATTGCCTGTTAAGGATTGTT+TGG + tig0031177:8398-8417 Msa1445770:CDS 35.0%
TTGCCTGTTAAGGATTGTTT+GGG + tig0031177:8399-8418 Msa1445770:CDS 35.0%
AATGCTGAGTAAGCTTAGAG+TGG + tig0031177:6396-6415 Msa1445770:five_prime_UTR 40.0%
TTCTTGCATTGCGAAATCAC+CGG - tig0031177:6640-6659 None:intergenic 40.0%
GAAGAAGCTCATAAGCTTCT+TGG - tig0031177:6668-6687 None:intergenic 40.0%
TATGAGCTTCTTCTCAATGC+TGG + tig0031177:6675-6694 Msa1445770:CDS 40.0%
GACACAGAGTGGTTTGAATT+TGG - tig0031177:6703-6722 None:intergenic 40.0%
! ATGCCTTCCATTAGAAGTGT+CGG + tig0031177:6860-6879 Msa1445770:intron 40.0%
!! AATAGCACCGACACTTCTAA+TGG - tig0031177:6870-6889 None:intergenic 40.0%
! TAGTGTTGGGAACAATTGCT+AGG + tig0031177:6961-6980 Msa1445770:CDS 40.0%
TGAGAGTAAAGCTGTGATGA+TGG + tig0031177:7064-7083 Msa1445770:CDS 40.0%
!! TAAAGCTGTGATGATGGCAT+GGG + tig0031177:7070-7089 Msa1445770:CDS 40.0%
CATGCTAAAGCTGTTTGTTC+AGG + tig0031177:7113-7132 Msa1445770:CDS 40.0%
GGTGGTCATGTACTCAATAT+TGG + tig0031177:7137-7156 Msa1445770:CDS 40.0%
AGCATACGTTCATAAACCTC+AGG - tig0031177:7236-7255 None:intergenic 40.0%
TTATGAACGTATGCTTCGCA+CGG + tig0031177:7241-7260 Msa1445770:CDS 40.0%
CATATGTTTCAAGCTGAGAC+AGG - tig0031177:7319-7338 None:intergenic 40.0%
TGTGTGACTTAAGAATTGCC+TGG - tig0031177:7970-7989 None:intergenic 40.0%
GGGATATTCTTTGACACCTA+CGG + tig0031177:8198-8217 Msa1445770:intron 40.0%
GGATATTCTTTGACACCTAC+GGG + tig0031177:8199-8218 Msa1445770:CDS 40.0%
GATATTCTTTGACACCTACG+GGG + tig0031177:8200-8219 Msa1445770:CDS 40.0%
TCAACAATACAGGGAGATGT+TGG - tig0031177:8254-8273 None:intergenic 40.0%
TCTTTCTTCAATGGCCTTTG+TGG + tig0031177:8291-8310 Msa1445770:CDS 40.0%
CTCTTGAGCTTGAGAATTTG+GGG + tig0031177:8355-8374 Msa1445770:CDS 40.0%
TGCCTGTTAAGGATTGTTTG+GGG + tig0031177:8400-8419 Msa1445770:CDS 40.0%
ATTGTTTGGGGGAAGAAGTT+TGG + tig0031177:8412-8431 Msa1445770:CDS 40.0%
TTGTTTGGGGGAAGAAGTTT+GGG + tig0031177:8413-8432 Msa1445770:CDS 40.0%
! AAGGTGTCAAACACAGATAC+TGG + tig0031177:8436-8455 Msa1445770:CDS 40.0%
AATGCTGAGTAAGCTTAGAG+TGG + tig0031177:6396-6415 Msa1445770:five_prime_UTR 40.0%
TTCTTGCATTGCGAAATCAC+CGG - tig0031177:6640-6659 None:intergenic 40.0%
GAAGAAGCTCATAAGCTTCT+TGG - tig0031177:6668-6687 None:intergenic 40.0%
TATGAGCTTCTTCTCAATGC+TGG + tig0031177:6675-6694 Msa1445770:CDS 40.0%
GACACAGAGTGGTTTGAATT+TGG - tig0031177:6703-6722 None:intergenic 40.0%
! ATGCCTTCCATTAGAAGTGT+CGG + tig0031177:6860-6879 Msa1445770:intron 40.0%
!! AATAGCACCGACACTTCTAA+TGG - tig0031177:6870-6889 None:intergenic 40.0%
! TAGTGTTGGGAACAATTGCT+AGG + tig0031177:6961-6980 Msa1445770:CDS 40.0%
TGAGAGTAAAGCTGTGATGA+TGG + tig0031177:7064-7083 Msa1445770:CDS 40.0%
!! TAAAGCTGTGATGATGGCAT+GGG + tig0031177:7070-7089 Msa1445770:CDS 40.0%
CATGCTAAAGCTGTTTGTTC+AGG + tig0031177:7113-7132 Msa1445770:CDS 40.0%
GGTGGTCATGTACTCAATAT+TGG + tig0031177:7137-7156 Msa1445770:CDS 40.0%
AGCATACGTTCATAAACCTC+AGG - tig0031177:7236-7255 None:intergenic 40.0%
TTATGAACGTATGCTTCGCA+CGG + tig0031177:7241-7260 Msa1445770:CDS 40.0%
CATATGTTTCAAGCTGAGAC+AGG - tig0031177:7319-7338 None:intergenic 40.0%
TGTGTGACTTAAGAATTGCC+TGG - tig0031177:7970-7989 None:intergenic 40.0%
GGGATATTCTTTGACACCTA+CGG + tig0031177:8198-8217 Msa1445770:intron 40.0%
GGATATTCTTTGACACCTAC+GGG + tig0031177:8199-8218 Msa1445770:CDS 40.0%
GATATTCTTTGACACCTACG+GGG + tig0031177:8200-8219 Msa1445770:CDS 40.0%
TCAACAATACAGGGAGATGT+TGG - tig0031177:8254-8273 None:intergenic 40.0%
TCTTTCTTCAATGGCCTTTG+TGG + tig0031177:8291-8310 Msa1445770:CDS 40.0%
CTCTTGAGCTTGAGAATTTG+GGG + tig0031177:8355-8374 Msa1445770:CDS 40.0%
TGCCTGTTAAGGATTGTTTG+GGG + tig0031177:8400-8419 Msa1445770:CDS 40.0%
ATTGTTTGGGGGAAGAAGTT+TGG + tig0031177:8412-8431 Msa1445770:CDS 40.0%
TTGTTTGGGGGAAGAAGTTT+GGG + tig0031177:8413-8432 Msa1445770:CDS 40.0%
! AAGGTGTCAAACACAGATAC+TGG + tig0031177:8436-8455 Msa1445770:CDS 40.0%
TTAGAGTGGCGCAAAGATGA+AGG + tig0031177:6410-6429 Msa1445770:exon 45.0%
GAAGGAAGAAGAACTATGCG+AGG + tig0031177:6428-6447 Msa1445770:CDS 45.0%
GATTAAAGGTGAGACGGAGA+AGG + tig0031177:6455-6474 Msa1445770:CDS 45.0%
GGTGATTTCGCAATGCAAGA+AGG + tig0031177:6639-6658 Msa1445770:CDS 45.0%
GTTAGTGTCAGTTTCGTGTC+AGG - tig0031177:6741-6760 None:intergenic 45.0%
TGACACTAACACGTCAACAC+CGG + tig0031177:6751-6770 Msa1445770:intron 45.0%
GTTGGGAACAATTGCTAGGA+AGG + tig0031177:6965-6984 Msa1445770:CDS 45.0%
!! GTAAAGCTGTGATGATGGCA+TGG + tig0031177:7069-7088 Msa1445770:CDS 45.0%
TTAGCATGAGCCTCCATCAA+TGG - tig0031177:7101-7120 None:intergenic 45.0%
GCTAAAGCTGTTTGTTCAGG+AGG + tig0031177:7116-7135 Msa1445770:CDS 45.0%
AAAGCTGTTTGTTCAGGAGG+TGG + tig0031177:7119-7138 Msa1445770:CDS 45.0%
TATGAACGTATGCTTCGCAC+GGG + tig0031177:7242-7261 Msa1445770:CDS 45.0%
!! TGCATTCCTGGAAAGCATCT+GGG - tig0031177:8052-8071 None:intergenic 45.0%
!! TTGCATTCCTGGAAAGCATC+TGG - tig0031177:8053-8072 None:intergenic 45.0%
TGCCTCTAAACTCTTTGACG+TGG + tig0031177:8149-8168 Msa1445770:intron 45.0%
GCCTCTAAACTCTTTGACGT+GGG + tig0031177:8150-8169 Msa1445770:intron 45.0%
ACAATACAGGGAGATGTTGG+TGG - tig0031177:8251-8270 None:intergenic 45.0%
TCTCCCTGTATTGTTGAAGC+CGG + tig0031177:8257-8276 Msa1445770:CDS 45.0%
TTCTTCAATGGCCTTTGTGG+TGG + tig0031177:8294-8313 Msa1445770:CDS 45.0%
CCAAGTGGCAGTAAACAACA+TGG - tig0031177:8332-8351 None:intergenic 45.0%
! CCATGTTGTTTACTGCCACT+TGG + tig0031177:8329-8348 Msa1445770:CDS 45.0%
CAAGCTCAAGAGATACCAAG+TGG - tig0031177:8347-8366 None:intergenic 45.0%
GCCTGTTAAGGATTGTTTGG+GGG + tig0031177:8401-8420 Msa1445770:CDS 45.0%
TCCCCCAAACAATCCTTAAC+AGG - tig0031177:8405-8424 None:intergenic 45.0%
CATCTGCAGACTGACAAACA+GGG - tig0031177:8482-8501 None:intergenic 45.0%
TCATCTGCAGACTGACAAAC+AGG - tig0031177:8483-8502 None:intergenic 45.0%
TTAGAGTGGCGCAAAGATGA+AGG + tig0031177:6410-6429 Msa1445770:exon 45.0%
GAAGGAAGAAGAACTATGCG+AGG + tig0031177:6428-6447 Msa1445770:CDS 45.0%
GATTAAAGGTGAGACGGAGA+AGG + tig0031177:6455-6474 Msa1445770:CDS 45.0%
GGTGATTTCGCAATGCAAGA+AGG + tig0031177:6639-6658 Msa1445770:CDS 45.0%
GTTAGTGTCAGTTTCGTGTC+AGG - tig0031177:6741-6760 None:intergenic 45.0%
TGACACTAACACGTCAACAC+CGG + tig0031177:6751-6770 Msa1445770:intron 45.0%
GTTGGGAACAATTGCTAGGA+AGG + tig0031177:6965-6984 Msa1445770:CDS 45.0%
!! GTAAAGCTGTGATGATGGCA+TGG + tig0031177:7069-7088 Msa1445770:CDS 45.0%
TTAGCATGAGCCTCCATCAA+TGG - tig0031177:7101-7120 None:intergenic 45.0%
GCTAAAGCTGTTTGTTCAGG+AGG + tig0031177:7116-7135 Msa1445770:CDS 45.0%
AAAGCTGTTTGTTCAGGAGG+TGG + tig0031177:7119-7138 Msa1445770:CDS 45.0%
TATGAACGTATGCTTCGCAC+GGG + tig0031177:7242-7261 Msa1445770:CDS 45.0%
!! TGCATTCCTGGAAAGCATCT+GGG - tig0031177:8052-8071 None:intergenic 45.0%
!! TTGCATTCCTGGAAAGCATC+TGG - tig0031177:8053-8072 None:intergenic 45.0%
TGCCTCTAAACTCTTTGACG+TGG + tig0031177:8149-8168 Msa1445770:intron 45.0%
GCCTCTAAACTCTTTGACGT+GGG + tig0031177:8150-8169 Msa1445770:intron 45.0%
ACAATACAGGGAGATGTTGG+TGG - tig0031177:8251-8270 None:intergenic 45.0%
TCTCCCTGTATTGTTGAAGC+CGG + tig0031177:8257-8276 Msa1445770:CDS 45.0%
TTCTTCAATGGCCTTTGTGG+TGG + tig0031177:8294-8313 Msa1445770:CDS 45.0%
CCAAGTGGCAGTAAACAACA+TGG - tig0031177:8332-8351 None:intergenic 45.0%
! CCATGTTGTTTACTGCCACT+TGG + tig0031177:8329-8348 Msa1445770:CDS 45.0%
CAAGCTCAAGAGATACCAAG+TGG - tig0031177:8347-8366 None:intergenic 45.0%
GCCTGTTAAGGATTGTTTGG+GGG + tig0031177:8401-8420 Msa1445770:CDS 45.0%
TCCCCCAAACAATCCTTAAC+AGG - tig0031177:8405-8424 None:intergenic 45.0%
CATCTGCAGACTGACAAACA+GGG - tig0031177:8482-8501 None:intergenic 45.0%
TCATCTGCAGACTGACAAAC+AGG - tig0031177:8483-8502 None:intergenic 45.0%
GGAAGAAGAACTATGCGAGG+CGG + tig0031177:6431-6450 Msa1445770:CDS 50.0%
GAAATGAGTAACGTCGGCAC+CGG - tig0031177:6499-6518 None:intergenic 50.0%
GCCGACGTTACTCATTTCGA+CGG + tig0031177:6501-6520 Msa1445770:CDS 50.0%
GCCGTCGAAATGAGTAACGT+CGG - tig0031177:6505-6524 None:intergenic 50.0%
GTTACTCATTTCGACGGCGA+TGG + tig0031177:6507-6526 Msa1445770:CDS 50.0%
GAGAGAAGGATGTCGAGGAT+GGG - tig0031177:6573-6592 None:intergenic 50.0%
!! GAAGGAGAAAGAGCGTTCCA+AGG - tig0031177:6606-6625 None:intergenic 50.0%
TTGCATTGCGAAATCACCGG+CGG - tig0031177:6637-6656 None:intergenic 50.0%
! GCACCGACACTTCTAATGGA+AGG - tig0031177:6866-6885 None:intergenic 50.0%
ATGGGAGAAGCCATTGATGG+AGG + tig0031177:7088-7107 Msa1445770:CDS 50.0%
CTCAGGATGAGCCTCAACAA+TGG - tig0031177:7219-7238 None:intergenic 50.0%
CATTGTTGAGGCTCATCCTG+AGG + tig0031177:7217-7236 Msa1445770:CDS 50.0%
CTGTTTCCCAGATGCTTTCC+AGG + tig0031177:8043-8062 Msa1445770:intron 50.0%
GCCCACGTCAAAGAGTTTAG+AGG - tig0031177:8154-8173 None:intergenic 50.0%
CTCCCTGTATTGTTGAAGCC+GGG + tig0031177:8258-8277 Msa1445770:CDS 50.0%
CACCCGGCTTCAACAATACA+GGG - tig0031177:8263-8282 None:intergenic 50.0%
TTGGGGGAAGAAGTTTGGGA+AGG + tig0031177:8417-8436 Msa1445770:CDS 50.0%
GGAAGAAGAACTATGCGAGG+CGG + tig0031177:6431-6450 Msa1445770:CDS 50.0%
GAAATGAGTAACGTCGGCAC+CGG - tig0031177:6499-6518 None:intergenic 50.0%
GCCGACGTTACTCATTTCGA+CGG + tig0031177:6501-6520 Msa1445770:CDS 50.0%
GCCGTCGAAATGAGTAACGT+CGG - tig0031177:6505-6524 None:intergenic 50.0%
GTTACTCATTTCGACGGCGA+TGG + tig0031177:6507-6526 Msa1445770:CDS 50.0%
GAGAGAAGGATGTCGAGGAT+GGG - tig0031177:6573-6592 None:intergenic 50.0%
!! GAAGGAGAAAGAGCGTTCCA+AGG - tig0031177:6606-6625 None:intergenic 50.0%
TTGCATTGCGAAATCACCGG+CGG - tig0031177:6637-6656 None:intergenic 50.0%
! GCACCGACACTTCTAATGGA+AGG - tig0031177:6866-6885 None:intergenic 50.0%
ATGGGAGAAGCCATTGATGG+AGG + tig0031177:7088-7107 Msa1445770:CDS 50.0%
CTCAGGATGAGCCTCAACAA+TGG - tig0031177:7219-7238 None:intergenic 50.0%
CATTGTTGAGGCTCATCCTG+AGG + tig0031177:7217-7236 Msa1445770:CDS 50.0%
CTGTTTCCCAGATGCTTTCC+AGG + tig0031177:8043-8062 Msa1445770:intron 50.0%
GCCCACGTCAAAGAGTTTAG+AGG - tig0031177:8154-8173 None:intergenic 50.0%
CTCCCTGTATTGTTGAAGCC+GGG + tig0031177:8258-8277 Msa1445770:CDS 50.0%
CACCCGGCTTCAACAATACA+GGG - tig0031177:8263-8282 None:intergenic 50.0%
TTGGGGGAAGAAGTTTGGGA+AGG + tig0031177:8417-8436 Msa1445770:CDS 50.0%
CTATGCGAGGCGGCGATTAA+AGG + tig0031177:6441-6460 Msa1445770:CDS 55.0%
GGCGGCGATTAAAGGTGAGA+CGG + tig0031177:6449-6468 Msa1445770:CDS 55.0%
TGCTTTGCGGCGAGCATAAG+AGG - tig0031177:6540-6559 None:intergenic 55.0%
CTTATGCTCGCCGCAAAGCA+CGG + tig0031177:6540-6559 Msa1445770:CDS 55.0%
GGAGAGAAGGATGTCGAGGA+TGG - tig0031177:6574-6593 None:intergenic 55.0%
!! AAGAGCGTTCCAAGGAGCAC+CGG - tig0031177:6598-6617 None:intergenic 55.0%
TCTCCTTCCAACCTTTCCGC+CGG + tig0031177:6618-6637 Msa1445770:CDS 55.0%
GAAATCACCGGCGGAAAGGT+TGG - tig0031177:6628-6647 None:intergenic 55.0%
TTGCGAAATCACCGGCGGAA+AGG - tig0031177:6632-6651 None:intergenic 55.0%
GGCATGGGAGAAGCCATTGA+TGG + tig0031177:7085-7104 Msa1445770:CDS 55.0%
AACGTATGCTTCGCACGGGT+TGG + tig0031177:7246-7265 Msa1445770:CDS 55.0%
ACGTATGCTTCGCACGGGTT+GGG + tig0031177:7247-7266 Msa1445770:CDS 55.0%
GTCGTCATAGTACTCCCCGT+AGG - tig0031177:8217-8236 None:intergenic 55.0%
CCACCCGGCTTCAACAATAC+AGG - tig0031177:8264-8283 None:intergenic 55.0%
CCTGTATTGTTGAAGCCGGG+TGG + tig0031177:8261-8280 Msa1445770:CDS 55.0%
CTGCAGACTGACAAACAGGG+AGG - tig0031177:8479-8498 None:intergenic 55.0%
CTATGCGAGGCGGCGATTAA+AGG + tig0031177:6441-6460 Msa1445770:CDS 55.0%
GGCGGCGATTAAAGGTGAGA+CGG + tig0031177:6449-6468 Msa1445770:CDS 55.0%
TGCTTTGCGGCGAGCATAAG+AGG - tig0031177:6540-6559 None:intergenic 55.0%
CTTATGCTCGCCGCAAAGCA+CGG + tig0031177:6540-6559 Msa1445770:CDS 55.0%
GGAGAGAAGGATGTCGAGGA+TGG - tig0031177:6574-6593 None:intergenic 55.0%
!! AAGAGCGTTCCAAGGAGCAC+CGG - tig0031177:6598-6617 None:intergenic 55.0%
TCTCCTTCCAACCTTTCCGC+CGG + tig0031177:6618-6637 Msa1445770:CDS 55.0%
GAAATCACCGGCGGAAAGGT+TGG - tig0031177:6628-6647 None:intergenic 55.0%
TTGCGAAATCACCGGCGGAA+AGG - tig0031177:6632-6651 None:intergenic 55.0%
GGCATGGGAGAAGCCATTGA+TGG + tig0031177:7085-7104 Msa1445770:CDS 55.0%
AACGTATGCTTCGCACGGGT+TGG + tig0031177:7246-7265 Msa1445770:CDS 55.0%
ACGTATGCTTCGCACGGGTT+GGG + tig0031177:7247-7266 Msa1445770:CDS 55.0%
GTCGTCATAGTACTCCCCGT+AGG - tig0031177:8217-8236 None:intergenic 55.0%
CCACCCGGCTTCAACAATAC+AGG - tig0031177:8264-8283 None:intergenic 55.0%
CCTGTATTGTTGAAGCCGGG+TGG + tig0031177:8261-8280 Msa1445770:CDS 55.0%
CTGCAGACTGACAAACAGGG+AGG - tig0031177:8479-8498 None:intergenic 55.0%
GGATGTCGAGGATGGGTGCA+TGG - tig0031177:6566-6585 None:intergenic 60.0%
CTCGACATCCTTCTCTCCGC+CGG + tig0031177:6576-6595 Msa1445770:CDS 60.0%
TCACCGGCGGAAAGGTTGGA+AGG - tig0031177:6624-6643 None:intergenic 60.0%
! CGTATGCTTCGCACGGGTTG+GGG + tig0031177:7248-7267 Msa1445770:CDS 60.0%
GGATGTCGAGGATGGGTGCA+TGG - tig0031177:6566-6585 None:intergenic 60.0%
CTCGACATCCTTCTCTCCGC+CGG + tig0031177:6576-6595 Msa1445770:CDS 60.0%
TCACCGGCGGAAAGGTTGGA+AGG - tig0031177:6624-6643 None:intergenic 60.0%
! CGTATGCTTCGCACGGGTTG+GGG + tig0031177:7248-7267 Msa1445770:CDS 60.0%
GGGTGCATGGCCGTGCTTTG+CGG - tig0031177:6553-6572 None:intergenic 65.0%
CGGCGGAGAGAAGGATGTCG+AGG - tig0031177:6578-6597 None:intergenic 65.0%
!! AAGGAGCACCGGCGGAGAGA+AGG - tig0031177:6587-6606 None:intergenic 65.0%
TTCTCTCCGCCGGTGCTCCT+TGG + tig0031177:6586-6605 Msa1445770:CDS 65.0%
!! AGCGTTCCAAGGAGCACCGG+CGG - tig0031177:6595-6614 None:intergenic 65.0%
!! TCGCACGGGTTGGGGTGAGA+AGG + tig0031177:7256-7275 Msa1445770:CDS 65.0%
GGGTGCATGGCCGTGCTTTG+CGG - tig0031177:6553-6572 None:intergenic 65.0%
CGGCGGAGAGAAGGATGTCG+AGG - tig0031177:6578-6597 None:intergenic 65.0%
!! AAGGAGCACCGGCGGAGAGA+AGG - tig0031177:6587-6606 None:intergenic 65.0%
TTCTCTCCGCCGGTGCTCCT+TGG + tig0031177:6586-6605 Msa1445770:CDS 65.0%
!! AGCGTTCCAAGGAGCACCGG+CGG - tig0031177:6595-6614 None:intergenic 65.0%
!! TCGCACGGGTTGGGGTGAGA+AGG + tig0031177:7256-7275 Msa1445770:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0031177 gene 6378 8739 6378 ID=Msa1445770;Name=Msa1445770
tig0031177 mRNA 6378 8739 6378 ID=Msa1445770-mRNA-1;Parent=Msa1445770;Name=Msa1445770-mRNA-1;_AED=0.01;_eAED=0.01;_QI=48|1|1|1|1|1|3|227|326
tig0031177 exon 6378 6696 6378 ID=Msa1445770-mRNA-1:exon:15125;Parent=Msa1445770-mRNA-1
tig0031177 exon 6946 7341 6946 ID=Msa1445770-mRNA-1:exon:15126;Parent=Msa1445770-mRNA-1
tig0031177 exon 8199 8739 8199 ID=Msa1445770-mRNA-1:exon:15127;Parent=Msa1445770-mRNA-1
tig0031177 five_prime_UTR 6378 6425 6378 ID=Msa1445770-mRNA-1:five_prime_utr;Parent=Msa1445770-mRNA-1
tig0031177 CDS 6426 6696 6426 ID=Msa1445770-mRNA-1:cds;Parent=Msa1445770-mRNA-1
tig0031177 CDS 6946 7341 6946 ID=Msa1445770-mRNA-1:cds;Parent=Msa1445770-mRNA-1
tig0031177 CDS 8199 8512 8199 ID=Msa1445770-mRNA-1:cds;Parent=Msa1445770-mRNA-1
tig0031177 three_prime_UTR 8513 8739 8513 ID=Msa1445770-mRNA-1:three_prime_utr;Parent=Msa1445770-mRNA-1
Gene Sequence

>Msa1445770

ATGAAGGAAGAAGAACTATGCGAGGCGGCGATTAAAGGTGAGACGGAGAAGGTAAAGTCTATTATTGACTCCGGTGCCGACGTTACTCATTTCGACGGCGATGGTCTCACTCCTCTTATGCTCGCCGCAAAGCACGGCCATGCACCCATCCTCGACATCCTTCTCTCCGCCGGTGCTCCTTGGAACGCTCTTTCTCCTTCCAACCTTTCCGCCGGTGATTTCGCAATGCAAGAAGGTCACCAAGAAGCTTATGAGCTTCTTCTCAATGCTGGTATTCGATCTGAATTAGTGTTGGGAACAATTGCTAGGAAGGAAAAGAAAAGCACTGATTCCGGTTATGATTATTTGGAAGATAGGGTAAGTTTTAGTGAAGATAAAGTAATGGATTCTGAGAGTAAAGCTGTGATGATGGCATGGGAGAAGCCATTGATGGAGGCTCATGCTAAAGCTGTTTGTTCAGGAGGTGGTCATGTACTCAATATTGGATTTGGAATGGGTCTTGTTGATACAGCTATACAACAATATTCACCTGTGAAACATACCATTGTTGAGGCTCATCCTGAGGTTTATGAACGTATGCTTCGCACGGGTTGGGGTGAGAAGGAAAATGTTCAGATCATTTTTGGTCGTTGGCAAGATGTCCTGTCTCAGCTTGAAACATATGATGGGATATTCTTTGACACCTACGGGGAGTACTATGACGACTTGAGAGAGTTCCACCAACATCTCCCTGTATTGTTGAAGCCGGGTGGAATATACTCTTTCTTCAATGGCCTTTGTGGTGGTAATGCATTTTTCCATGTTGTTTACTGCCACTTGGTATCTCTTGAGCTTGAGAATTTGGGGTATTCCACACAATTAATTCCATTGCCTGTTAAGGATTGTTTGGGGGAAGAAGTTTGGGAAGGTGTCAAACACAGATACTGGCAGCTTGATACATACTACCTCCCTGTTTGTCAGTCTGCAGATGACTCTGAGTGA
Protein sequence

>Msa1445770

MKEEELCEAAIKGETEKVKSIIDSGADVTHFDGDGLTPLMLAAKHGHAPILDILLSAGAPWNALSPSNLSAGDFAMQEGHQEAYELLLNAGIRSELVLGTIARKEKKSTDSGYDYLEDRVSFSEDKVMDSESKAVMMAWEKPLMEAHAKAVCSGGGHVLNIGFGMGLVDTAIQQYSPVKHTIVEAHPEVYERMLRTGWGEKENVQIIFGRWQDVLSQLETYDGIFFDTYGEYYDDLREFHQHLPVLLKPGGIYSFFNGLCGGNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEEVWEGVKHRYWQLDTYYLPVCQSADDSE*