Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432000 | XP_024635913.1 | 92.917 | 240 | 5 | 1 | 1 | 240 | 1 | 228 | 4.21e-157 | 445 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432000 | G7J9T9 | 92.917 | 240 | 5 | 1 | 1 | 240 | 1 | 228 | 2.01e-157 | 445 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0432000 | Msa0520860 | 0.955683 | 1.720044e-113 | -8.615850e-47 |
| Msa0432000 | Msa1374800 | 0.847246 | 1.306043e-59 | -8.615850e-47 |
| Msa0432000 | Msa1451830 | 0.845733 | 3.378291e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432000 | MtrunA17_Chr3g0136861 | 92.917 | 240 | 5 | 1 | 1 | 240 | 1 | 228 | 3.87e-161 | 445 |
| Msa0432000 | MtrunA17_Chr1g0150121 | 37.158 | 183 | 67 | 4 | 1 | 181 | 1 | 137 | 1.06e-24 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432000 | AT5G25080.1 | 47.196 | 214 | 98 | 3 | 13 | 226 | 16 | 214 | 4.88e-66 | 204 |
Find 91 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGCTGCTCAGGAGTTTC+TGG | 0.118592 | 3_2:+84119662 | Msa0432000:CDS |
| AATATATTAAAGTTGGATTT+TGG | 0.159125 | 3_2:+84122221 | Msa0432000:three_prime_UTR |
| TGGTAATAATGGCGGTATTA+AGG | 0.185771 | 3_2:+84119710 | Msa0432000:CDS |
| TAACTTGGTTTATTGCTTCT+AGG | 0.211762 | 3_2:+84119446 | Msa0432000:CDS |
| GAGGAGGGTAGAAGTGATTT+TGG | 0.247186 | 3_2:-84118676 | None:intergenic |
| CTCCAGGTGGGTTGTTAACT+TGG | 0.270614 | 3_2:+84119431 | Msa0432000:CDS |
| ACGCCTTCTAGATTTGAATA+AGG | 0.277390 | 3_2:+84118976 | Msa0432000:CDS |
| CTACCATAGTTCAGAAATTC+AGG | 0.310944 | 3_2:-84119820 | None:intergenic |
| ATTTCATTAGTTAGATGTTT+AGG | 0.316283 | 3_2:+84122080 | Msa0432000:three_prime_UTR |
| CAGTTATAATATATTAAAGT+TGG | 0.321665 | 3_2:+84122214 | Msa0432000:three_prime_UTR |
| TTAGTTAGATGTTTAGGCTT+TGG | 0.330093 | 3_2:+84122086 | Msa0432000:three_prime_UTR |
| TCAATTCACACACACATAAC+TGG | 0.347303 | 3_2:+84122048 | Msa0432000:three_prime_UTR |
| CGCCTTCTAGATTTGAATAA+GGG | 0.349424 | 3_2:+84118977 | Msa0432000:CDS |
| GGTAATAATGGCGGTATTAA+GGG | 0.353390 | 3_2:+84119711 | Msa0432000:CDS |
| AACTTGGTTTATTGCTTCTA+GGG | 0.357017 | 3_2:+84119447 | Msa0432000:CDS |
| TTCTGTTCAAGCTGCTGCTC+AGG | 0.368572 | 3_2:+84119653 | Msa0432000:CDS |
| TGCTTCAATTTGTGTTGTAC+TGG | 0.368687 | 3_2:+84122131 | Msa0432000:three_prime_UTR |
| AGATGTTTAGGCTTTGGATT+TGG | 0.371676 | 3_2:+84122092 | Msa0432000:three_prime_UTR |
| GACTGAATCCATCACCGCTT+CGG | 0.381291 | 3_2:-84118529 | None:intergenic |
| GGAAGTTGGGAGAGAGTTTG+AGG | 0.381337 | 3_2:-84118618 | None:intergenic |
| CACACACATAACTGGACATA+TGG | 0.390185 | 3_2:+84122056 | Msa0432000:three_prime_UTR |
| AGAGTTTGAGGGTTCATAAG+AGG | 0.391223 | 3_2:-84118606 | None:intergenic |
| TGACCTGAATTTCTGAACTA+TGG | 0.391907 | 3_2:+84119817 | Msa0432000:exon |
| ACTGAATCCATCACCGCTTC+GGG | 0.404917 | 3_2:-84118528 | None:intergenic |
| GATTTGACAGGGTTATCATC+TGG | 0.415518 | 3_2:-84118831 | None:intergenic |
| CCCTTCTCCGCAGGTGTGTG+TGG | 0.420952 | 3_2:+84121917 | Msa0432000:intron |
| TGAACGGAATTCACGAAGAT+TGG | 0.426985 | 3_2:-84118565 | None:intergenic |
| TACCCTTATTCAAATCTAGA+AGG | 0.427243 | 3_2:-84118979 | None:intergenic |
| TGAGAATTCAACATAGTAGA+AGG | 0.433685 | 3_2:-84119367 | None:intergenic |
| CATGCCTCATCCACACTGTA+TGG | 0.436915 | 3_2:+84122186 | Msa0432000:three_prime_UTR |
| CACGTTCAAGAGGTGGAAGT+TGG | 0.442376 | 3_2:-84118632 | None:intergenic |
| TGGAGAGGAGAAAGAGAGAG+TGG | 0.446758 | 3_2:-84118656 | None:intergenic |
| CAATTTGTGTTGTACTGGTT+GGG | 0.448764 | 3_2:+84122136 | Msa0432000:three_prime_UTR |
| TCCGCAGGTGTGTGTGGGAG+AGG | 0.454268 | 3_2:+84121923 | Msa0432000:intron |
| TCTTTGCCTGACCTCACTCC+AGG | 0.468606 | 3_2:+84119415 | Msa0432000:CDS |
| CTGTAACTTTCCTTTGCCAA+TGG | 0.477592 | 3_2:+84121947 | Msa0432000:three_prime_UTR |
| TCAATTTGTGTTGTACTGGT+TGG | 0.482306 | 3_2:+84122135 | Msa0432000:three_prime_UTR |
| ATGATGATTACGTGTGAGGA+GGG | 0.486690 | 3_2:-84118691 | None:intergenic |
| TAGTTCAGAAATTCAGGTCA+TGG | 0.488101 | 3_2:-84119814 | None:intergenic |
| ACGTTCAAGAGGTGGAAGTT+GGG | 0.491157 | 3_2:-84118631 | None:intergenic |
| GCAGCTTGAACAGAAATAGA+TGG | 0.491461 | 3_2:-84119645 | None:intergenic |
| GGGAAAGAAGAGGAAACATC+AGG | 0.491988 | 3_2:+84119581 | Msa0432000:CDS |
| CTCACAAGCTCTGATTTGAC+AGG | 0.494155 | 3_2:-84118843 | None:intergenic |
| GAAGTTGGGAGAGAGTTTGA+GGG | 0.500143 | 3_2:-84118617 | None:intergenic |
| AGGAGTACCCGAAGCGGTGA+TGG | 0.509427 | 3_2:+84118521 | Msa0432000:CDS |
| AACCCACCTGGAGTGAGGTC+AGG | 0.514003 | 3_2:-84119421 | None:intergenic |
| CCTTCTCCGCAGGTGTGTGT+GGG | 0.517915 | 3_2:+84121918 | Msa0432000:intron |
| CAACACTGTTACTGCGGTGG+AGG | 0.518682 | 3_2:-84118442 | None:intergenic |
| CTGACGAACACAAGCTCCAT+TGG | 0.520526 | 3_2:-84121963 | None:intergenic |
| TGCCTGACCTCACTCCAGGT+GGG | 0.522792 | 3_2:+84119419 | Msa0432000:CDS |
| AGGAGCAGGCTGGTCAAAAG+AGG | 0.529385 | 3_2:+84119601 | Msa0432000:CDS |
| AGTGAAAGTGAAAGCTGTGG+AGG | 0.534576 | 3_2:+84118501 | Msa0432000:CDS |
| TTGCCTGACCTCACTCCAGG+TGG | 0.536716 | 3_2:+84119418 | Msa0432000:CDS |
| GAAGAGGAAACATCAGGAGC+AGG | 0.536755 | 3_2:+84119587 | Msa0432000:CDS |
| TGGTTTATTGCTTCTAGGGG+TGG | 0.537027 | 3_2:+84119451 | Msa0432000:CDS |
| CAGAACAACGGCAGAGAATG+AGG | 0.541135 | 3_2:+84119541 | Msa0432000:intron |
| AATTCCATACAGTGTGGATG+AGG | 0.552515 | 3_2:-84122190 | None:intergenic |
| GAGTGGGCACGTTCAAGAGG+TGG | 0.552869 | 3_2:-84118639 | None:intergenic |
| AGAGAGTGGGCACGTTCAAG+AGG | 0.559812 | 3_2:-84118642 | None:intergenic |
| TTGTGTTGTACTGGTTGGGA+AGG | 0.569963 | 3_2:+84122140 | Msa0432000:three_prime_UTR |
| TGGAGCTTGTGTTCGTCAGA+TGG | 0.576053 | 3_2:+84121967 | Msa0432000:three_prime_UTR |
| GACATGTTGTCAATTTGAAG+TGG | 0.576081 | 3_2:-84119735 | None:intergenic |
| ACTTGGTTTATTGCTTCTAG+GGG | 0.576336 | 3_2:+84119448 | Msa0432000:CDS |
| AGTTCAGAAATTCAGGTCAT+GGG | 0.578175 | 3_2:-84119813 | None:intergenic |
| TTCACGAAGATTGGAGAGAG+TGG | 0.578299 | 3_2:-84118556 | None:intergenic |
| GTAATAATGGCGGTATTAAG+GGG | 0.582541 | 3_2:+84119712 | Msa0432000:CDS |
| AGGAAACATCAGGAGCAGGC+TGG | 0.583685 | 3_2:+84119591 | Msa0432000:CDS |
| GTTTCTGGAGAAAGCACAGA+GGG | 0.589967 | 3_2:+84119677 | Msa0432000:CDS |
| AACCAAGTTAACAACCCACC+TGG | 0.591176 | 3_2:-84119433 | None:intergenic |
| AAAACTGTTGAAAATGTGAA+CGG | 0.603460 | 3_2:-84118581 | None:intergenic |
| GGAGAGGAGAAAGAGAGAGT+GGG | 0.607959 | 3_2:-84118655 | None:intergenic |
| GACAATCTTTCAGAAGATGA+CGG | 0.608692 | 3_2:+84119780 | Msa0432000:CDS |
| AGGAACTTAAGTAGCGGCGA+GGG | 0.610045 | 3_2:+84119561 | Msa0432000:CDS |
| CTTCAACACTGTTACTGCGG+TGG | 0.614668 | 3_2:-84118445 | None:intergenic |
| ATGTGTGTGTGAATTGAGAG+AGG | 0.618311 | 3_2:-84122042 | None:intergenic |
| AACACAAGCTCCATTGGCAA+AGG | 0.620080 | 3_2:-84121957 | None:intergenic |
| GCAGTGAAATTGAGGTGCAG+TGG | 0.625638 | 3_2:+84118801 | Msa0432000:intron |
| GGAAGTGAAAGTGAAAGCTG+TGG | 0.627299 | 3_2:+84118498 | Msa0432000:CDS |
| AACATAGTAGAAGGTCGCAA+TGG | 0.635548 | 3_2:-84119358 | None:intergenic |
| GAACTTCAACACTGTTACTG+CGG | 0.643762 | 3_2:-84118448 | None:intergenic |
| GAAGATGATGATTACGTGTG+AGG | 0.647831 | 3_2:-84118695 | None:intergenic |
| TTAACAACCCACCTGGAGTG+AGG | 0.652502 | 3_2:-84119426 | None:intergenic |
| GAGGAACTTAAGTAGCGGCG+AGG | 0.667273 | 3_2:+84119560 | Msa0432000:CDS |
| GATGATGATTACGTGTGAGG+AGG | 0.668929 | 3_2:-84118692 | None:intergenic |
| TCACAAGCTCTGATTTGACA+GGG | 0.674644 | 3_2:-84118842 | None:intergenic |
| AACTGAAATTCCATACAGTG+TGG | 0.675054 | 3_2:-84122196 | None:intergenic |
| CTGTGGAGGAGTACCCGAAG+CGG | 0.685892 | 3_2:+84118515 | Msa0432000:CDS |
| GTAGCGGCGAGGGAAAGAAG+AGG | 0.690376 | 3_2:+84119571 | Msa0432000:CDS |
| TTATTTCATATGCAGAACAA+CGG | 0.698855 | 3_2:+84119529 | Msa0432000:intron |
| AGAATGAGGAACTTAAGTAG+CGG | 0.704922 | 3_2:+84119555 | Msa0432000:CDS |
| AGTTTCTGGAGAAAGCACAG+AGG | 0.726155 | 3_2:+84119676 | Msa0432000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATTATAATTCAGAT+GGG | - | chr3_2:84119945-84119964 | None:intergenic | 10.0% |
| !! | TAATAAAATTATAATTCAGA+TGG | - | chr3_2:84119946-84119965 | None:intergenic | 10.0% |
| !! | AAGTAAAAAAATAAAATGAA+AGG | + | chr3_2:84120270-84120289 | Msa0432000:intron | 10.0% |
| !!! | TTTTAAAATGCTTTAAAAAT+TGG | - | chr3_2:84120957-84120976 | None:intergenic | 10.0% |
| !! | ATAAAATTATAATTCAGATG+GGG | - | chr3_2:84119944-84119963 | None:intergenic | 15.0% |
| !! | ACATTAAACTAAACTTAAAT+TGG | + | chr3_2:84120103-84120122 | Msa0432000:intron | 15.0% |
| !!! | AGTACAATATACTTTAATTT+TGG | - | chr3_2:84120877-84120896 | None:intergenic | 15.0% |
| !!! | AAAATATTGATTAATGTGTT+TGG | + | chr3_2:84120978-84120997 | Msa0432000:intron | 15.0% |
| !!! | AAATATTGATTAATGTGTTT+GGG | + | chr3_2:84120979-84120998 | Msa0432000:intron | 15.0% |
| !! | TTCATCATGTTATAATTATT+AGG | + | chr3_2:84121070-84121089 | Msa0432000:intron | 15.0% |
| !! | TCATCATGTTATAATTATTA+GGG | + | chr3_2:84121071-84121090 | Msa0432000:intron | 15.0% |
| !! | ATAAAATCATAAATTGAACA+CGG | - | chr3_2:84121683-84121702 | None:intergenic | 15.0% |
| !!! | ATTGTTTAAGTTTATAATCT+AGG | + | chr3_2:84121719-84121738 | Msa0432000:intron | 15.0% |
| !!! | TTTTTAAGAAATGTATATCA+GGG | - | chr3_2:84121807-84121826 | None:intergenic | 15.0% |
| !!! | ATTTTTAAGAAATGTATATC+AGG | - | chr3_2:84121808-84121827 | None:intergenic | 15.0% |
| !! | CAGTTATAATATATTAAAGT+TGG | + | chr3_2:84122214-84122233 | Msa0432000:three_prime_UTR | 15.0% |
| !!! | AATATATTAAAGTTGGATTT+TGG | + | chr3_2:84122221-84122240 | Msa0432000:three_prime_UTR | 15.0% |
| !! | AAAGGGAATAAGAAAAATTA+CGG | + | chr3_2:84118361-84118380 | Msa0432000:five_prime_UTR | 20.0% |
| !! | ATAGAACAAGAAAATTAAGT+TGG | - | chr3_2:84118762-84118781 | None:intergenic | 20.0% |
| !! | AAGTTCAAAATATAAGATGA+TGG | + | chr3_2:84119067-84119086 | Msa0432000:intron | 20.0% |
| !! | AAGTCTAAGCTAATAAAAAA+GGG | - | chr3_2:84119283-84119302 | None:intergenic | 20.0% |
| !! | CATAAATTAATTAACCAAGT+CGG | + | chr3_2:84120176-84120195 | Msa0432000:intron | 20.0% |
| !!! | ATATTATGTTAGTTTTTCTC+AGG | - | chr3_2:84120308-84120327 | None:intergenic | 20.0% |
| !! | TTTGGAAAAAAAAATATGTG+AGG | - | chr3_2:84120359-84120378 | None:intergenic | 20.0% |
| !! | AAATCTTAAAAATGTAGGAT+TGG | - | chr3_2:84120579-84120598 | None:intergenic | 20.0% |
| !! | GTAGAATTAGTAAAATACTT+CGG | - | chr3_2:84120804-84120823 | None:intergenic | 20.0% |
| !!! | TAAAATGCTTTAAAAATTGG+AGG | - | chr3_2:84120954-84120973 | None:intergenic | 20.0% |
| !! | CATCATGTTATAATTATTAG+GGG | + | chr3_2:84121072-84121091 | Msa0432000:intron | 20.0% |
| !! | AAGGGAAAAAATTATATTTG+TGG | + | chr3_2:84121359-84121378 | Msa0432000:intron | 20.0% |
| !! | TAAAATCATAAATTGAACAC+GGG | - | chr3_2:84121682-84121701 | None:intergenic | 20.0% |
| !!! | TTGTTTCTGTTAGAATTTTA+TGG | + | chr3_2:84121768-84121787 | Msa0432000:intron | 20.0% |
| !! | ATTTCATTAGTTAGATGTTT+AGG | + | chr3_2:84122080-84122099 | Msa0432000:three_prime_UTR | 20.0% |
| !! | ATTTAAAAGCCCTAGATTTT+AGG | + | chr3_2:84118411-84118430 | Msa0432000:five_prime_UTR | 25.0% |
| ! | AAAACTGTTGAAAATGTGAA+CGG | - | chr3_2:84118584-84118603 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGCAGTGAAATTG+AGG | + | chr3_2:84118793-84118812 | Msa0432000:intron | 25.0% |
| !!! | GATTTTTGTTGTGTATTTTC+AGG | + | chr3_2:84118922-84118941 | Msa0432000:intron | 25.0% |
| !!! | AAGATGATGGATATTTGAAT+TGG | + | chr3_2:84119080-84119099 | Msa0432000:intron | 25.0% |
| ! | AGTCTAAGCTAATAAAAAAG+GGG | - | chr3_2:84119282-84119301 | None:intergenic | 25.0% |
| ! | CAAGTCTAAGCTAATAAAAA+AGG | - | chr3_2:84119284-84119303 | None:intergenic | 25.0% |
| ! | TTATTTCATATGCAGAACAA+CGG | + | chr3_2:84119529-84119548 | Msa0432000:intron | 25.0% |
| ! | TTACACTCGTAAAGTAAATA+AGG | - | chr3_2:84119861-84119880 | None:intergenic | 25.0% |
| !!! | ACGATTTGATAATGCATTTT+AGG | + | chr3_2:84119965-84119984 | Msa0432000:intron | 25.0% |
| !!! | CGATTTGATAATGCATTTTA+GGG | + | chr3_2:84119966-84119985 | Msa0432000:intron | 25.0% |
| !!! | GATTTGATAATGCATTTTAG+GGG | + | chr3_2:84119967-84119986 | Msa0432000:intron | 25.0% |
| ! | AAAAAATATGTGAGGAGATT+TGG | - | chr3_2:84120351-84120370 | None:intergenic | 25.0% |
| !! | ATTTACTGTTATTTAACAGC+TGG | + | chr3_2:84120825-84120844 | Msa0432000:intron | 25.0% |
| ! | TAATCTTTGGATATGTATCT+AGG | - | chr3_2:84120930-84120949 | None:intergenic | 25.0% |
| ! | AAAAATTGGAGGATAATCTT+TGG | - | chr3_2:84120943-84120962 | None:intergenic | 25.0% |
| !! | TGGAGTTGTATCTAAAATTA+TGG | - | chr3_2:84121014-84121033 | None:intergenic | 25.0% |
| !! | ACAGATTTTACATTGAAGTT+TGG | + | chr3_2:84121516-84121535 | Msa0432000:intron | 25.0% |
| ! | TTACATTGAAGTTTGGAAAA+TGG | + | chr3_2:84121523-84121542 | Msa0432000:intron | 25.0% |
| GCAGAAAAACCTAAAATCTA+GGG | - | chr3_2:84118423-84118442 | None:intergenic | 30.0% | |
| TTCAACACAAAAATGGTGAA+AGG | + | chr3_2:84118477-84118496 | Msa0432000:exon | 30.0% | |
| TACCCTTATTCAAATCTAGA+AGG | - | chr3_2:84118982-84119001 | None:intergenic | 30.0% | |
| ACATGTTAACCTTCAATATG+AGG | + | chr3_2:84119236-84119255 | Msa0432000:intron | 30.0% | |
| TTAGCTTAGACTTGTAGTAT+TGG | + | chr3_2:84119290-84119309 | Msa0432000:intron | 30.0% | |
| ! | TGATTGTGTTTTCGTGATTT+TGG | + | chr3_2:84119319-84119338 | Msa0432000:intron | 30.0% |
| TGAGAATTCAACATAGTAGA+AGG | - | chr3_2:84119370-84119389 | None:intergenic | 30.0% | |
| TAACTTGGTTTATTGCTTCT+AGG | + | chr3_2:84119446-84119465 | Msa0432000:CDS | 30.0% | |
| AACTTGGTTTATTGCTTCTA+GGG | + | chr3_2:84119447-84119466 | Msa0432000:CDS | 30.0% | |
| TACATGCAATGTGATCAAAA+TGG | - | chr3_2:84119496-84119515 | None:intergenic | 30.0% | |
| ATTGCATGTATGTAAAGAAG+TGG | + | chr3_2:84119506-84119525 | Msa0432000:intron | 30.0% | |
| !! | GAACTTTTTGGTGGTAATAA+TGG | + | chr3_2:84119699-84119718 | Msa0432000:CDS | 30.0% |
| ATCCCAAGTTTGAAAACATT+GGG | - | chr3_2:84120023-84120042 | None:intergenic | 30.0% | |
| !!! | AGTTGATTTTTTTCCACCTA+TGG | + | chr3_2:84120220-84120239 | Msa0432000:intron | 30.0% |
| !!! | ATTTTTTTCCACCTATGGTT+AGG | + | chr3_2:84120225-84120244 | Msa0432000:intron | 30.0% |
| AATTAGAAAGACCTAACCAT+AGG | - | chr3_2:84120239-84120258 | None:intergenic | 30.0% | |
| GGGCAAAATCTTAAAAATGT+AGG | - | chr3_2:84120584-84120603 | None:intergenic | 30.0% | |
| !! | TACAATCCTACAAGTTTTGA+AGG | - | chr3_2:84120689-84120708 | None:intergenic | 30.0% |
| ACTTATCTGTTCATTCTTTG+AGG | + | chr3_2:84121102-84121121 | Msa0432000:intron | 30.0% | |
| GATGTAAGGAATAAAAAACG+TGG | + | chr3_2:84121124-84121143 | Msa0432000:intron | 30.0% | |
| TGTCGGTATCACAAAAAATT+AGG | - | chr3_2:84121334-84121353 | None:intergenic | 30.0% | |
| !!! | ATTTTTTCCCTTATCAGTGT+CGG | - | chr3_2:84121351-84121370 | None:intergenic | 30.0% |
| TTAGTTAGATGTTTAGGCTT+TGG | + | chr3_2:84122086-84122105 | Msa0432000:three_prime_UTR | 30.0% | |
| ! | TAAAGTTGGATTTTGGATGT+TGG | + | chr3_2:84122228-84122247 | Msa0432000:three_prime_UTR | 30.0% |
| GGCAGAAAAACCTAAAATCT+AGG | - | chr3_2:84118424-84118443 | None:intergenic | 35.0% | |
| CGAGACATTCAACACAAAAA+TGG | + | chr3_2:84118470-84118489 | Msa0432000:exon | 35.0% | |
| TCAAACAGAGTAAGCAACAA+GGG | - | chr3_2:84118904-84118923 | None:intergenic | 35.0% | |
| ATCAAACAGAGTAAGCAACA+AGG | - | chr3_2:84118905-84118924 | None:intergenic | 35.0% | |
| ACGCCTTCTAGATTTGAATA+AGG | + | chr3_2:84118976-84118995 | Msa0432000:CDS | 35.0% | |
| CGCCTTCTAGATTTGAATAA+GGG | + | chr3_2:84118977-84118996 | Msa0432000:CDS | 35.0% | |
| TTGAATTTAAGCACATGCGT+CGG | + | chr3_2:84119192-84119211 | Msa0432000:intron | 35.0% | |
| TAACCTTCAATATGAGGTGT+TGG | + | chr3_2:84119242-84119261 | Msa0432000:intron | 35.0% | |
| ACTTGGTTTATTGCTTCTAG+GGG | + | chr3_2:84119448-84119467 | Msa0432000:CDS | 35.0% | |
| AGAATGAGGAACTTAAGTAG+CGG | + | chr3_2:84119555-84119574 | Msa0432000:CDS | 35.0% | |
| !! | CTTTTTGGTGGTAATAATGG+CGG | + | chr3_2:84119702-84119721 | Msa0432000:CDS | 35.0% |
| TGGTAATAATGGCGGTATTA+AGG | + | chr3_2:84119710-84119729 | Msa0432000:CDS | 35.0% | |
| GGTAATAATGGCGGTATTAA+GGG | + | chr3_2:84119711-84119730 | Msa0432000:CDS | 35.0% | |
| GTAATAATGGCGGTATTAAG+GGG | + | chr3_2:84119712-84119731 | Msa0432000:CDS | 35.0% | |
| GACATGTTGTCAATTTGAAG+TGG | - | chr3_2:84119738-84119757 | None:intergenic | 35.0% | |
| GACAATCTTTCAGAAGATGA+CGG | + | chr3_2:84119780-84119799 | Msa0432000:CDS | 35.0% | |
| AGTTCAGAAATTCAGGTCAT+GGG | - | chr3_2:84119816-84119835 | None:intergenic | 35.0% | |
| TAGTTCAGAAATTCAGGTCA+TGG | - | chr3_2:84119817-84119836 | None:intergenic | 35.0% | |
| TGACCTGAATTTCTGAACTA+TGG | + | chr3_2:84119817-84119836 | Msa0432000:exon | 35.0% | |
| CTACCATAGTTCAGAAATTC+AGG | - | chr3_2:84119823-84119842 | None:intergenic | 35.0% | |
| CAGTGCGGATTTACAAATTA+GGG | + | chr3_2:84119903-84119922 | Msa0432000:intron | 35.0% | |
| ! | AGACCCAATGTTTTCAAACT+TGG | + | chr3_2:84120017-84120036 | Msa0432000:intron | 35.0% |
| ! | GACCCAATGTTTTCAAACTT+GGG | + | chr3_2:84120018-84120037 | Msa0432000:intron | 35.0% |
| GATCCCAAGTTTGAAAACAT+TGG | - | chr3_2:84120024-84120043 | None:intergenic | 35.0% | |
| !!! | TAGTTTTTTCACTTCCGACT+TGG | - | chr3_2:84120193-84120212 | None:intergenic | 35.0% |
| ACGTCAGCATATTATAAGAG+GGG | - | chr3_2:84120418-84120437 | None:intergenic | 35.0% | |
| CACGTCAGCATATTATAAGA+GGG | - | chr3_2:84120419-84120438 | None:intergenic | 35.0% | |
| TCACGTCAGCATATTATAAG+AGG | - | chr3_2:84120420-84120439 | None:intergenic | 35.0% | |
| GGTTACATAGAAGAAACAAC+AGG | + | chr3_2:84120490-84120509 | Msa0432000:intron | 35.0% | |
| AACAACAGGACTTAGTAAAC+TGG | + | chr3_2:84120504-84120523 | Msa0432000:intron | 35.0% | |
| ACAACAGGACTTAGTAAACT+GGG | + | chr3_2:84120505-84120524 | Msa0432000:intron | 35.0% | |
| AAGCATCAGATTTGGATTAC+GGG | - | chr3_2:84120604-84120623 | None:intergenic | 35.0% | |
| CAAGCATCAGATTTGGATTA+CGG | - | chr3_2:84120605-84120624 | None:intergenic | 35.0% | |
| TTGTATCGTTCGATTGTACA+AGG | + | chr3_2:84120704-84120723 | Msa0432000:intron | 35.0% | |
| ACGATATTGACAACATTGTG+TGG | + | chr3_2:84120733-84120752 | Msa0432000:intron | 35.0% | |
| ACATTGTGTGGACATTAGAT+AGG | + | chr3_2:84120745-84120764 | Msa0432000:intron | 35.0% | |
| ! | TTTGGAGTTTCTGAACTTTG+TGG | - | chr3_2:84120859-84120878 | None:intergenic | 35.0% |
| ATGAAGAAGAAAGCTGTACA+AGG | - | chr3_2:84121055-84121074 | None:intergenic | 35.0% | |
| ! | GTTCATTCTTTGAGGATGTA+AGG | + | chr3_2:84121110-84121129 | Msa0432000:intron | 35.0% |
| GTACGCAATAAACTTGATGA+TGG | + | chr3_2:84121168-84121187 | Msa0432000:intron | 35.0% | |
| AAAATCGATAAGCAAGTGCA+TGG | - | chr3_2:84121654-84121673 | None:intergenic | 35.0% | |
| TCAATTCACACACACATAAC+TGG | + | chr3_2:84122048-84122067 | Msa0432000:three_prime_UTR | 35.0% | |
| !! | AGATGTTTAGGCTTTGGATT+TGG | + | chr3_2:84122092-84122111 | Msa0432000:three_prime_UTR | 35.0% |
| TGCTTCAATTTGTGTTGTAC+TGG | + | chr3_2:84122131-84122150 | Msa0432000:three_prime_UTR | 35.0% | |
| ! | TCAATTTGTGTTGTACTGGT+TGG | + | chr3_2:84122135-84122154 | Msa0432000:three_prime_UTR | 35.0% |
| !! | CAATTTGTGTTGTACTGGTT+GGG | + | chr3_2:84122136-84122155 | Msa0432000:three_prime_UTR | 35.0% |
| AACTGAAATTCCATACAGTG+TGG | - | chr3_2:84122199-84122218 | None:intergenic | 35.0% | |
| GAACTTCAACACTGTTACTG+CGG | - | chr3_2:84118451-84118470 | None:intergenic | 40.0% | |
| TGAACGGAATTCACGAAGAT+TGG | - | chr3_2:84118568-84118587 | None:intergenic | 40.0% | |
| AGAGTTTGAGGGTTCATAAG+AGG | - | chr3_2:84118609-84118628 | None:intergenic | 40.0% | |
| ATGATGATTACGTGTGAGGA+GGG | - | chr3_2:84118694-84118713 | None:intergenic | 40.0% | |
| GAAGATGATGATTACGTGTG+AGG | - | chr3_2:84118698-84118717 | None:intergenic | 40.0% | |
| GATTTGACAGGGTTATCATC+TGG | - | chr3_2:84118834-84118853 | None:intergenic | 40.0% | |
| ! | TCACAAGCTCTGATTTGACA+GGG | - | chr3_2:84118845-84118864 | None:intergenic | 40.0% |
| ATCATCAGTGTCTATGTGTC+AGG | - | chr3_2:84119151-84119170 | None:intergenic | 40.0% | |
| AACATAGTAGAAGGTCGCAA+TGG | - | chr3_2:84119361-84119380 | None:intergenic | 40.0% | |
| GCAGCTTGAACAGAAATAGA+TGG | - | chr3_2:84119648-84119667 | None:intergenic | 40.0% | |
| ! | AAAGCACAGAGGGAACTTTT+TGG | + | chr3_2:84119687-84119706 | Msa0432000:CDS | 40.0% |
| GCAGTGCGGATTTACAAATT+AGG | + | chr3_2:84119902-84119921 | Msa0432000:intron | 40.0% | |
| TGTGACAAAGGATCATAGCA+CGG | + | chr3_2:84120063-84120082 | Msa0432000:intron | 40.0% | |
| TAGAAAGACCTAACCATAGG+TGG | - | chr3_2:84120236-84120255 | None:intergenic | 40.0% | |
| ! | AGGAGATTTGGTAGAGACAT+TGG | - | chr3_2:84120339-84120358 | None:intergenic | 40.0% |
| TTATAAGAGGGGGAACGAAT+GGG | - | chr3_2:84120407-84120426 | None:intergenic | 40.0% | |
| ATTATAAGAGGGGGAACGAA+TGG | - | chr3_2:84120408-84120427 | None:intergenic | 40.0% | |
| CGTCAGCATATTATAAGAGG+GGG | - | chr3_2:84120417-84120436 | None:intergenic | 40.0% | |
| TTATGGGCAAGCATCAGATT+TGG | - | chr3_2:84120612-84120631 | None:intergenic | 40.0% | |
| !! | TAGGATCAGGTTGGGATTAT+GGG | - | chr3_2:84120628-84120647 | None:intergenic | 40.0% |
| CTTGAGCCTTCAAAACTTGT+AGG | + | chr3_2:84120680-84120699 | Msa0432000:intron | 40.0% | |
| ATATGATGCTGATATGCCCA+CGG | + | chr3_2:84120900-84120919 | Msa0432000:intron | 40.0% | |
| !! | TATGTATCTAGGAGTACCGT+GGG | - | chr3_2:84120919-84120938 | None:intergenic | 40.0% |
| !! | ATATGTATCTAGGAGTACCG+TGG | - | chr3_2:84120920-84120939 | None:intergenic | 40.0% |
| ! | GGATCTTCAAGGCAAGTTTT+TGG | - | chr3_2:84121034-84121053 | None:intergenic | 40.0% |
| AAGCTGTACAAGGATCTTCA+AGG | - | chr3_2:84121045-84121064 | None:intergenic | 40.0% | |
| TTTAATGCAGAGTCGTTGCT+TGG | + | chr3_2:84121196-84121215 | Msa0432000:intron | 40.0% | |
| TTGTGATACCGACACTGATA+AGG | + | chr3_2:84121340-84121359 | Msa0432000:intron | 40.0% | |
| TGTGATACCGACACTGATAA+GGG | + | chr3_2:84121341-84121360 | Msa0432000:intron | 40.0% | |
| CTGTAACTTTCCTTTGCCAA+TGG | + | chr3_2:84121947-84121966 | Msa0432000:three_prime_UTR | 40.0% | |
| ATGTGTGTGTGAATTGAGAG+AGG | - | chr3_2:84122045-84122064 | None:intergenic | 40.0% | |
| CACACACATAACTGGACATA+TGG | + | chr3_2:84122056-84122075 | Msa0432000:three_prime_UTR | 40.0% | |
| AATTCCATACAGTGTGGATG+AGG | - | chr3_2:84122193-84122212 | None:intergenic | 40.0% | |
| ! | AGTTGGATTTTGGATGTTGG+TGG | + | chr3_2:84122231-84122250 | Msa0432000:three_prime_UTR | 40.0% |
| GGAAGTGAAAGTGAAAGCTG+TGG | + | chr3_2:84118498-84118517 | Msa0432000:CDS | 45.0% | |
| AGTGAAAGTGAAAGCTGTGG+AGG | + | chr3_2:84118501-84118520 | Msa0432000:CDS | 45.0% | |
| TTCACGAAGATTGGAGAGAG+TGG | - | chr3_2:84118559-84118578 | None:intergenic | 45.0% | |
| GAAGTTGGGAGAGAGTTTGA+GGG | - | chr3_2:84118620-84118639 | None:intergenic | 45.0% | |
| ACGTTCAAGAGGTGGAAGTT+GGG | - | chr3_2:84118634-84118653 | None:intergenic | 45.0% | |
| !! | GGGTAGAAGTGATTTTGGAG+AGG | - | chr3_2:84118674-84118693 | None:intergenic | 45.0% |
| ! | GAGGAGGGTAGAAGTGATTT+TGG | - | chr3_2:84118679-84118698 | None:intergenic | 45.0% |
| GATGATGATTACGTGTGAGG+AGG | - | chr3_2:84118695-84118714 | None:intergenic | 45.0% | |
| ! | CTCACAAGCTCTGATTTGAC+AGG | - | chr3_2:84118846-84118865 | None:intergenic | 45.0% |
| CAGAGTAAGCAACAAGGGTT+AGG | - | chr3_2:84118899-84118918 | None:intergenic | 45.0% | |
| GCACCAACACCTCATATTGA+AGG | - | chr3_2:84119248-84119267 | None:intergenic | 45.0% | |
| AACCAAGTTAACAACCCACC+TGG | - | chr3_2:84119436-84119455 | None:intergenic | 45.0% | |
| ! | TGGTTTATTGCTTCTAGGGG+TGG | + | chr3_2:84119451-84119470 | Msa0432000:CDS | 45.0% |
| GGGAAAGAAGAGGAAACATC+AGG | + | chr3_2:84119581-84119600 | Msa0432000:CDS | 45.0% | |
| ! | AGTTTCTGGAGAAAGCACAG+AGG | + | chr3_2:84119676-84119695 | Msa0432000:CDS | 45.0% |
| ! | GTTTCTGGAGAAAGCACAGA+GGG | + | chr3_2:84119677-84119696 | Msa0432000:CDS | 45.0% |
| TCGTTATACTAGCTGCAGTG+CGG | + | chr3_2:84119888-84119907 | Msa0432000:intron | 45.0% | |
| TATAAGAGGGGGAACGAATG+GGG | - | chr3_2:84120406-84120425 | None:intergenic | 45.0% | |
| GAGTAAGAAGGACATTGCAG+AGG | + | chr3_2:84120442-84120461 | Msa0432000:intron | 45.0% | |
| AAGAAGGACATTGCAGAGGA+TGG | + | chr3_2:84120446-84120465 | Msa0432000:intron | 45.0% | |
| !! | TGTCCTGTCAAGGTTTGTTG+TGG | + | chr3_2:84120549-84120568 | Msa0432000:intron | 45.0% |
| AGTCCACAACAAACCTTGAC+AGG | - | chr3_2:84120555-84120574 | None:intergenic | 45.0% | |
| !! | CTAGGATCAGGTTGGGATTA+TGG | - | chr3_2:84120629-84120648 | None:intergenic | 45.0% |
| !!! | GTTTTTTTTCCCTTCTCCGC+AGG | + | chr3_2:84121908-84121927 | Msa0432000:intron | 45.0% |
| AACACAAGCTCCATTGGCAA+AGG | - | chr3_2:84121960-84121979 | None:intergenic | 45.0% | |
| !! | TTGTGTTGTACTGGTTGGGA+AGG | + | chr3_2:84122140-84122159 | Msa0432000:three_prime_UTR | 45.0% |
| CTTCAACACTGTTACTGCGG+TGG | - | chr3_2:84118448-84118467 | None:intergenic | 50.0% | |
| ACTGAATCCATCACCGCTTC+GGG | - | chr3_2:84118531-84118550 | None:intergenic | 50.0% | |
| GACTGAATCCATCACCGCTT+CGG | - | chr3_2:84118532-84118551 | None:intergenic | 50.0% | |
| GGAAGTTGGGAGAGAGTTTG+AGG | - | chr3_2:84118621-84118640 | None:intergenic | 50.0% | |
| CACGTTCAAGAGGTGGAAGT+TGG | - | chr3_2:84118635-84118654 | None:intergenic | 50.0% | |
| GGAGAGGAGAAAGAGAGAGT+GGG | - | chr3_2:84118658-84118677 | None:intergenic | 50.0% | |
| TGGAGAGGAGAAAGAGAGAG+TGG | - | chr3_2:84118659-84118678 | None:intergenic | 50.0% | |
| GCAGTGAAATTGAGGTGCAG+TGG | + | chr3_2:84118801-84118820 | Msa0432000:intron | 50.0% | |
| ! | TTAAGCACATGCGTCGGTGT+TGG | + | chr3_2:84119198-84119217 | Msa0432000:intron | 50.0% |
| ! | TAAGCACATGCGTCGGTGTT+GGG | + | chr3_2:84119199-84119218 | Msa0432000:intron | 50.0% |
| TTAACAACCCACCTGGAGTG+AGG | - | chr3_2:84119429-84119448 | None:intergenic | 50.0% | |
| !! | CTCCAGGTGGGTTGTTAACT+TGG | + | chr3_2:84119431-84119450 | Msa0432000:CDS | 50.0% |
| CAGAACAACGGCAGAGAATG+AGG | + | chr3_2:84119541-84119560 | Msa0432000:intron | 50.0% | |
| AGGAACTTAAGTAGCGGCGA+GGG | + | chr3_2:84119561-84119580 | Msa0432000:CDS | 50.0% | |
| GAAGAGGAAACATCAGGAGC+AGG | + | chr3_2:84119587-84119606 | Msa0432000:CDS | 50.0% | |
| TTCTGTTCAAGCTGCTGCTC+AGG | + | chr3_2:84119653-84119672 | Msa0432000:CDS | 50.0% | |
| ! | GCACAGAGGGAACTTTTTGG+TGG | + | chr3_2:84119690-84119709 | Msa0432000:CDS | 50.0% |
| TCAAACTTGGGATCCTGCCT+AGG | + | chr3_2:84120030-84120049 | Msa0432000:intron | 50.0% | |
| GATCCTTTGTCACACCCTTC+CGG | - | chr3_2:84120057-84120076 | None:intergenic | 50.0% | |
| ATAAGAGGGGGAACGAATGG+GGG | - | chr3_2:84120405-84120424 | None:intergenic | 50.0% | |
| GCTGACGTGAGAGAGTAAGA+AGG | + | chr3_2:84120430-84120449 | Msa0432000:intron | 50.0% | |
| AAGGACATTGCAGAGGATGG+AGG | + | chr3_2:84120449-84120468 | Msa0432000:intron | 50.0% | |
| CATTGCAGAGGATGGAGGAA+CGG | + | chr3_2:84120454-84120473 | Msa0432000:intron | 50.0% | |
| GATGGAGGAACGGATCGATA+AGG | + | chr3_2:84120464-84120483 | Msa0432000:intron | 50.0% | |
| AGGAACGGATCGATAAGGAG+AGG | + | chr3_2:84120469-84120488 | Msa0432000:intron | 50.0% | |
| GGACTTAGTAAACTGGGCTG+TGG | + | chr3_2:84120511-84120530 | Msa0432000:intron | 50.0% | |
| AAGCATGCTGAATCGTGAGC+GGG | - | chr3_2:84120663-84120682 | None:intergenic | 50.0% | |
| CAAGCATGCTGAATCGTGAG+CGG | - | chr3_2:84120664-84120683 | None:intergenic | 50.0% | |
| GCAACTTCTCAGGACACACA+AGG | - | chr3_2:84121617-84121636 | None:intergenic | 50.0% | |
| TGTGTGTCCTGAGAAGTTGC+AGG | + | chr3_2:84121617-84121636 | Msa0432000:intron | 50.0% | |
| TGCTCTTCCTGCAACTTCTC+AGG | - | chr3_2:84121627-84121646 | None:intergenic | 50.0% | |
| CTGACGAACACAAGCTCCAT+TGG | - | chr3_2:84121966-84121985 | None:intergenic | 50.0% | |
| TGGAGCTTGTGTTCGTCAGA+TGG | + | chr3_2:84121967-84121986 | Msa0432000:three_prime_UTR | 50.0% | |
| CATGCCTCATCCACACTGTA+TGG | + | chr3_2:84122186-84122205 | Msa0432000:three_prime_UTR | 50.0% | |
| CAACACTGTTACTGCGGTGG+AGG | - | chr3_2:84118445-84118464 | None:intergenic | 55.0% | |
| AGAGAGTGGGCACGTTCAAG+AGG | - | chr3_2:84118645-84118664 | None:intergenic | 55.0% | |
| TCTTTGCCTGACCTCACTCC+AGG | + | chr3_2:84119415-84119434 | Msa0432000:CDS | 55.0% | |
| GAGGAACTTAAGTAGCGGCG+AGG | + | chr3_2:84119560-84119579 | Msa0432000:CDS | 55.0% | |
| AGGAAACATCAGGAGCAGGC+TGG | + | chr3_2:84119591-84119610 | Msa0432000:CDS | 55.0% | |
| ! | AGGAGCAGGCTGGTCAAAAG+AGG | + | chr3_2:84119601-84119620 | Msa0432000:CDS | 55.0% |
| AGCTGCTGCTCAGGAGTTTC+TGG | + | chr3_2:84119662-84119681 | Msa0432000:CDS | 55.0% | |
| GGAACGAATGGGGGAATAGG+CGG | - | chr3_2:84120396-84120415 | None:intergenic | 55.0% | |
| GTAAACTGGGCTGTGGAACC+TGG | + | chr3_2:84120518-84120537 | Msa0432000:intron | 55.0% | |
| TGACAGGACAGTTTCCAGCC+AGG | - | chr3_2:84120539-84120558 | None:intergenic | 55.0% | |
| GGCTGGAAACTGTCCTGTCA+AGG | + | chr3_2:84120539-84120558 | Msa0432000:intron | 55.0% | |
| !! | CGGAGCTCTAGGATCAGGTT+GGG | - | chr3_2:84120636-84120655 | None:intergenic | 55.0% |
| !! | ACGGAGCTCTAGGATCAGGT+TGG | - | chr3_2:84120637-84120656 | None:intergenic | 55.0% |
| !! | GATCACGGAGCTCTAGGATC+AGG | - | chr3_2:84120641-84120660 | None:intergenic | 55.0% |
| CTGAATCGTGAGCGGGATCA+CGG | - | chr3_2:84120656-84120675 | None:intergenic | 55.0% | |
| !! | CTGTGGAGGAGTACCCGAAG+CGG | + | chr3_2:84118515-84118534 | Msa0432000:CDS | 60.0% |
| !! | AGGAGTACCCGAAGCGGTGA+TGG | + | chr3_2:84118521-84118540 | Msa0432000:CDS | 60.0% |
| GAGTGGGCACGTTCAAGAGG+TGG | - | chr3_2:84118642-84118661 | None:intergenic | 60.0% | |
| TTGCCTGACCTCACTCCAGG+TGG | + | chr3_2:84119418-84119437 | Msa0432000:CDS | 60.0% | |
| TGCCTGACCTCACTCCAGGT+GGG | + | chr3_2:84119419-84119438 | Msa0432000:CDS | 60.0% | |
| AACCCACCTGGAGTGAGGTC+AGG | - | chr3_2:84119424-84119443 | None:intergenic | 60.0% | |
| GTAGCGGCGAGGGAAAGAAG+AGG | + | chr3_2:84119571-84119590 | Msa0432000:CDS | 60.0% | |
| CTTGGGATCCTGCCTAGGAC+CGG | + | chr3_2:84120035-84120054 | Msa0432000:intron | 60.0% | |
| GATCCTGCCTAGGACCGGAA+GGG | + | chr3_2:84120040-84120059 | Msa0432000:intron | 60.0% | |
| TGTCACACCCTTCCGGTCCT+AGG | - | chr3_2:84120050-84120069 | None:intergenic | 60.0% | |
| ! | GGACCGGAAGGGTGTGACAA+AGG | + | chr3_2:84120051-84120070 | Msa0432000:intron | 60.0% |
| GCGGCAGGGTTGCATGTGTT+TGG | - | chr3_2:84120377-84120396 | None:intergenic | 60.0% | |
| GAATGGGGGAATAGGCGGCA+GGG | - | chr3_2:84120391-84120410 | None:intergenic | 60.0% | |
| GGGGGAACGAATGGGGGAAT+AGG | - | chr3_2:84120399-84120418 | None:intergenic | 60.0% | |
| CCACACACACCTGCGGAGAA+GGG | - | chr3_2:84121920-84121939 | None:intergenic | 60.0% | |
| CCTTCTCCGCAGGTGTGTGT+GGG | + | chr3_2:84121918-84121937 | Msa0432000:intron | 60.0% | |
| ACCTCTCCCACACACACCTG+CGG | - | chr3_2:84121927-84121946 | None:intergenic | 60.0% | |
| GGATCCTGCCTAGGACCGGA+AGG | + | chr3_2:84120039-84120058 | Msa0432000:intron | 65.0% | |
| ACACCCTTCCGGTCCTAGGC+AGG | - | chr3_2:84120046-84120065 | None:intergenic | 65.0% | |
| CGAATGGGGGAATAGGCGGC+AGG | - | chr3_2:84120392-84120411 | None:intergenic | 65.0% | |
| ACTGGGCTGTGGAACCTGGC+TGG | + | chr3_2:84120522-84120541 | Msa0432000:intron | 65.0% | |
| GAGCGGGATCACGGAGCTCT+AGG | - | chr3_2:84120647-84120666 | None:intergenic | 65.0% | |
| CCCTTCTCCGCAGGTGTGTG+TGG | + | chr3_2:84121917-84121936 | Msa0432000:intron | 65.0% | |
| CCCACACACACCTGCGGAGA+AGG | - | chr3_2:84121921-84121940 | None:intergenic | 65.0% | |
| TCCGCAGGTGTGTGTGGGAG+AGG | + | chr3_2:84121923-84121942 | Msa0432000:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 84118350 | 84122255 | 84118350 | ID=Msa0432000;Name=Msa0432000 |
| chr3_2 | mRNA | 84118350 | 84122255 | 84118350 | ID=Msa0432000-mRNA-1;Parent=Msa0432000;Name=Msa0432000-mRNA-1;_AED=0.04;_eAED=0.04;_QI=139|0.8|0.83|1|0.8|0.66|6|340|240 |
| chr3_2 | exon | 84118350 | 84118702 | 84118350 | ID=Msa0432000-mRNA-1:exon:23690;Parent=Msa0432000-mRNA-1 |
| chr3_2 | exon | 84118805 | 84118860 | 84118805 | ID=Msa0432000-mRNA-1:exon:23691;Parent=Msa0432000-mRNA-1 |
| chr3_2 | exon | 84118944 | 84118998 | 84118944 | ID=Msa0432000-mRNA-1:exon:23692;Parent=Msa0432000-mRNA-1 |
| chr3_2 | exon | 84119356 | 84119472 | 84119356 | ID=Msa0432000-mRNA-1:exon:23693;Parent=Msa0432000-mRNA-1 |
| chr3_2 | exon | 84119544 | 84119838 | 84119544 | ID=Msa0432000-mRNA-1:exon:23694;Parent=Msa0432000-mRNA-1 |
| chr3_2 | exon | 84121930 | 84122255 | 84121930 | ID=Msa0432000-mRNA-1:exon:23695;Parent=Msa0432000-mRNA-1 |
| chr3_2 | five_prime_UTR | 84118350 | 84118488 | 84118350 | ID=Msa0432000-mRNA-1:five_prime_utr;Parent=Msa0432000-mRNA-1 |
| chr3_2 | CDS | 84118489 | 84118702 | 84118489 | ID=Msa0432000-mRNA-1:cds;Parent=Msa0432000-mRNA-1 |
| chr3_2 | CDS | 84118805 | 84118860 | 84118805 | ID=Msa0432000-mRNA-1:cds;Parent=Msa0432000-mRNA-1 |
| chr3_2 | CDS | 84118944 | 84118998 | 84118944 | ID=Msa0432000-mRNA-1:cds;Parent=Msa0432000-mRNA-1 |
| chr3_2 | CDS | 84119356 | 84119472 | 84119356 | ID=Msa0432000-mRNA-1:cds;Parent=Msa0432000-mRNA-1 |
| chr3_2 | CDS | 84119544 | 84119824 | 84119544 | ID=Msa0432000-mRNA-1:cds;Parent=Msa0432000-mRNA-1 |
| chr3_2 | three_prime_UTR | 84119825 | 84119838 | 84119825 | ID=Msa0432000-mRNA-1:three_prime_utr;Parent=Msa0432000-mRNA-1 |
| chr3_2 | three_prime_UTR | 84121930 | 84122255 | 84121930 | ID=Msa0432000-mRNA-1:three_prime_utr;Parent=Msa0432000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
