Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520860 | XP_024635913.1 | 92.917 | 240 | 5 | 1 | 1 | 240 | 1 | 228 | 4.21e-157 | 445 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520860 | G7J9T9 | 92.917 | 240 | 5 | 1 | 1 | 240 | 1 | 228 | 2.01e-157 | 445 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0204780 | Msa0520860 | -0.802471 | 5.524107e-49 | -8.615850e-47 |
| Msa0432000 | Msa0520860 | 0.955683 | 1.720044e-113 | -8.615850e-47 |
| Msa0520860 | Msa1374800 | 0.921676 | 2.636066e-88 | -8.615850e-47 |
| Msa0520860 | Msa1451830 | 0.921150 | 5.169957e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520860 | MtrunA17_Chr3g0136861 | 92.917 | 240 | 5 | 1 | 1 | 240 | 1 | 228 | 3.87e-161 | 445 |
| Msa0520860 | MtrunA17_Chr1g0150121 | 37.158 | 183 | 67 | 4 | 1 | 181 | 1 | 137 | 1.06e-24 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520860 | AT5G25080.1 | 47.196 | 214 | 98 | 3 | 13 | 226 | 16 | 214 | 4.88e-66 | 204 |
Find 91 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGCTGCTCAGGAGTTTC+TGG | 0.118592 | 3_4:+73393508 | Msa0520860:CDS |
| AATATATTAAAGTTGGATTT+TGG | 0.159125 | 3_4:+73396076 | Msa0520860:three_prime_UTR |
| TGGTAATAATGGCGGTATTA+AGG | 0.185771 | 3_4:+73393556 | Msa0520860:CDS |
| TAACTTGGTTTATTGCTTCT+AGG | 0.211762 | 3_4:+73393292 | Msa0520860:CDS |
| GAGGAGGGTAGAAGTGATTT+TGG | 0.247186 | 3_4:-73392552 | None:intergenic |
| CTCCAGGTGGGTTGTTAACT+TGG | 0.270614 | 3_4:+73393277 | Msa0520860:CDS |
| ACGCCTTCTAGATTTGAATA+AGG | 0.277390 | 3_4:+73392852 | Msa0520860:CDS |
| CTACCATAGTTCAGAAATTC+AGG | 0.310944 | 3_4:-73393666 | None:intergenic |
| ATTTCATTAGTTAGATGTTT+AGG | 0.316283 | 3_4:+73395925 | Msa0520860:three_prime_UTR |
| CAGTTATAATATATTAAAGT+TGG | 0.321665 | 3_4:+73396069 | Msa0520860:three_prime_UTR |
| TTAGTTAGATGTTTAGGCTT+TGG | 0.330093 | 3_4:+73395931 | Msa0520860:three_prime_UTR |
| TCAATTCACACACACATAAC+TGG | 0.347303 | 3_4:+73395893 | Msa0520860:three_prime_UTR |
| CGCCTTCTAGATTTGAATAA+GGG | 0.349424 | 3_4:+73392853 | Msa0520860:CDS |
| GGTAATAATGGCGGTATTAA+GGG | 0.353390 | 3_4:+73393557 | Msa0520860:CDS |
| AACTTGGTTTATTGCTTCTA+GGG | 0.357017 | 3_4:+73393293 | Msa0520860:CDS |
| TTCTGTTCAAGCTGCTGCTC+AGG | 0.368572 | 3_4:+73393499 | Msa0520860:CDS |
| TGCTTCAATTTGTGTTGTAC+TGG | 0.368687 | 3_4:+73395986 | Msa0520860:three_prime_UTR |
| AGATGTTTAGGCTTTGGATT+TGG | 0.371676 | 3_4:+73395937 | Msa0520860:three_prime_UTR |
| GACTGAATCCATCACCGCTT+CGG | 0.381291 | 3_4:-73392405 | None:intergenic |
| GGAAGTTGGGAGAGAGTTTG+AGG | 0.381337 | 3_4:-73392494 | None:intergenic |
| CACACACATAACTGGACATA+TGG | 0.390185 | 3_4:+73395901 | Msa0520860:three_prime_UTR |
| AGAGTTTGAGGGTTCATAAG+AGG | 0.391223 | 3_4:-73392482 | None:intergenic |
| TGACCTGAATTTCTGAACTA+TGG | 0.391907 | 3_4:+73393663 | Msa0520860:exon |
| ACTGAATCCATCACCGCTTC+GGG | 0.404917 | 3_4:-73392404 | None:intergenic |
| GATTTGACAGGGTTATCATC+TGG | 0.415518 | 3_4:-73392707 | None:intergenic |
| CCCTTCTCCGCAGGTGTGTG+TGG | 0.420952 | 3_4:+73395762 | Msa0520860:intron |
| TGAACGGAATTCACGAAGAT+TGG | 0.426985 | 3_4:-73392441 | None:intergenic |
| TACCCTTATTCAAATCTAGA+AGG | 0.427243 | 3_4:-73392855 | None:intergenic |
| TGAGAATTCAACATAGTAGA+AGG | 0.433685 | 3_4:-73393213 | None:intergenic |
| CATGCCTCATCCACACTGTA+TGG | 0.436915 | 3_4:+73396041 | Msa0520860:three_prime_UTR |
| CACGTTCAAGAGGTGGAAGT+TGG | 0.442376 | 3_4:-73392508 | None:intergenic |
| TGGAGAGGAGAAAGAGAGAG+TGG | 0.446758 | 3_4:-73392532 | None:intergenic |
| CAATTTGTGTTGTACTGGTT+GGG | 0.448764 | 3_4:+73395991 | Msa0520860:three_prime_UTR |
| TCCGCAGGTGTGTGTGGGAG+AGG | 0.454268 | 3_4:+73395768 | Msa0520860:intron |
| TCTTTGCCTGACCTCACTCC+AGG | 0.468606 | 3_4:+73393261 | Msa0520860:CDS |
| CTGTAACTTTCCTTTGCCAA+TGG | 0.477592 | 3_4:+73395792 | Msa0520860:three_prime_UTR |
| TCAATTTGTGTTGTACTGGT+TGG | 0.482306 | 3_4:+73395990 | Msa0520860:three_prime_UTR |
| ATGATGATTACGTGTGAGGA+GGG | 0.486690 | 3_4:-73392567 | None:intergenic |
| TAGTTCAGAAATTCAGGTCA+TGG | 0.488101 | 3_4:-73393660 | None:intergenic |
| ACGTTCAAGAGGTGGAAGTT+GGG | 0.491157 | 3_4:-73392507 | None:intergenic |
| GCAGCTTGAACAGAAATAGA+TGG | 0.491461 | 3_4:-73393491 | None:intergenic |
| GGGAAAGAAGAGGAAACATC+AGG | 0.491988 | 3_4:+73393427 | Msa0520860:CDS |
| CTCACAAGCTCTGATTTGAC+AGG | 0.494155 | 3_4:-73392719 | None:intergenic |
| GAAGTTGGGAGAGAGTTTGA+GGG | 0.500143 | 3_4:-73392493 | None:intergenic |
| AGGAGTACCCGAAGCGGTGA+TGG | 0.509427 | 3_4:+73392397 | Msa0520860:CDS |
| AACCCACCTGGAGTGAGGTC+AGG | 0.514003 | 3_4:-73393267 | None:intergenic |
| CCTTCTCCGCAGGTGTGTGT+GGG | 0.517915 | 3_4:+73395763 | Msa0520860:intron |
| CAACACTGTTACTGCGGTGG+AGG | 0.518682 | 3_4:-73392318 | None:intergenic |
| CTGACGAACACAAGCTCCAT+TGG | 0.520526 | 3_4:-73395808 | None:intergenic |
| TGCCTGACCTCACTCCAGGT+GGG | 0.522792 | 3_4:+73393265 | Msa0520860:CDS |
| AGGAGCAGGCTGGTCAAAAG+AGG | 0.529385 | 3_4:+73393447 | Msa0520860:CDS |
| AGTGAAAGTGAAAGCTGTGG+AGG | 0.534576 | 3_4:+73392377 | Msa0520860:CDS |
| TTGCCTGACCTCACTCCAGG+TGG | 0.536716 | 3_4:+73393264 | Msa0520860:CDS |
| GAAGAGGAAACATCAGGAGC+AGG | 0.536755 | 3_4:+73393433 | Msa0520860:CDS |
| TGGTTTATTGCTTCTAGGGG+TGG | 0.537027 | 3_4:+73393297 | Msa0520860:CDS |
| CAGAACAACGGCAGAGAATG+AGG | 0.541135 | 3_4:+73393387 | Msa0520860:intron |
| AATTCCATACAGTGTGGATG+AGG | 0.552515 | 3_4:-73396045 | None:intergenic |
| GAGTGGGCACGTTCAAGAGG+TGG | 0.552869 | 3_4:-73392515 | None:intergenic |
| AGAGAGTGGGCACGTTCAAG+AGG | 0.559812 | 3_4:-73392518 | None:intergenic |
| TTGTGTTGTACTGGTTGGGA+AGG | 0.569963 | 3_4:+73395995 | Msa0520860:three_prime_UTR |
| TGGAGCTTGTGTTCGTCAGA+TGG | 0.576053 | 3_4:+73395812 | Msa0520860:three_prime_UTR |
| GACATGTTGTCAATTTGAAG+TGG | 0.576081 | 3_4:-73393581 | None:intergenic |
| ACTTGGTTTATTGCTTCTAG+GGG | 0.576336 | 3_4:+73393294 | Msa0520860:CDS |
| AGTTCAGAAATTCAGGTCAT+GGG | 0.578175 | 3_4:-73393659 | None:intergenic |
| TTCACGAAGATTGGAGAGAG+TGG | 0.578299 | 3_4:-73392432 | None:intergenic |
| GTAATAATGGCGGTATTAAG+GGG | 0.582541 | 3_4:+73393558 | Msa0520860:CDS |
| AGGAAACATCAGGAGCAGGC+TGG | 0.583685 | 3_4:+73393437 | Msa0520860:CDS |
| GTTTCTGGAGAAAGCACAGA+GGG | 0.589967 | 3_4:+73393523 | Msa0520860:CDS |
| AACCAAGTTAACAACCCACC+TGG | 0.591176 | 3_4:-73393279 | None:intergenic |
| AAAACTGTTGAAAATGTGAA+CGG | 0.603460 | 3_4:-73392457 | None:intergenic |
| GGAGAGGAGAAAGAGAGAGT+GGG | 0.607959 | 3_4:-73392531 | None:intergenic |
| GACAATCTTTCAGAAGATGA+CGG | 0.608692 | 3_4:+73393626 | Msa0520860:CDS |
| AGGAACTTAAGTAGCGGCGA+GGG | 0.610045 | 3_4:+73393407 | Msa0520860:CDS |
| CTTCAACACTGTTACTGCGG+TGG | 0.614668 | 3_4:-73392321 | None:intergenic |
| ATGTGTGTGTGAATTGAGAG+AGG | 0.618311 | 3_4:-73395887 | None:intergenic |
| AACACAAGCTCCATTGGCAA+AGG | 0.620080 | 3_4:-73395802 | None:intergenic |
| GCAGTGAAATTGAGGTGCAG+TGG | 0.625638 | 3_4:+73392677 | Msa0520860:intron |
| GGAAGTGAAAGTGAAAGCTG+TGG | 0.627299 | 3_4:+73392374 | Msa0520860:CDS |
| AACATAGTAGAAGGTCGCAA+TGG | 0.635548 | 3_4:-73393204 | None:intergenic |
| GAACTTCAACACTGTTACTG+CGG | 0.643762 | 3_4:-73392324 | None:intergenic |
| GAAGATGATGATTACGTGTG+AGG | 0.647831 | 3_4:-73392571 | None:intergenic |
| TTAACAACCCACCTGGAGTG+AGG | 0.652502 | 3_4:-73393272 | None:intergenic |
| GAGGAACTTAAGTAGCGGCG+AGG | 0.667273 | 3_4:+73393406 | Msa0520860:CDS |
| GATGATGATTACGTGTGAGG+AGG | 0.668929 | 3_4:-73392568 | None:intergenic |
| TCACAAGCTCTGATTTGACA+GGG | 0.674644 | 3_4:-73392718 | None:intergenic |
| AACTGAAATTCCATACAGTG+TGG | 0.675054 | 3_4:-73396051 | None:intergenic |
| CTGTGGAGGAGTACCCGAAG+CGG | 0.685892 | 3_4:+73392391 | Msa0520860:CDS |
| GTAGCGGCGAGGGAAAGAAG+AGG | 0.690376 | 3_4:+73393417 | Msa0520860:CDS |
| TTATTTCATATGCAGAACAA+CGG | 0.698855 | 3_4:+73393375 | Msa0520860:intron |
| AGAATGAGGAACTTAAGTAG+CGG | 0.704922 | 3_4:+73393401 | Msa0520860:CDS |
| AGTTTCTGGAGAAAGCACAG+AGG | 0.726155 | 3_4:+73393522 | Msa0520860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATTATAATTCAGAT+GGG | - | chr3_4:73393791-73393810 | None:intergenic | 10.0% |
| !! | TAATAAAATTATAATTCAGA+TGG | - | chr3_4:73393792-73393811 | None:intergenic | 10.0% |
| !! | AAGTAAAAAAATAAAATGAA+AGG | + | chr3_4:73394116-73394135 | Msa0520860:intron | 10.0% |
| !!! | TTTTAAAATGCTTTAAAAAT+TGG | - | chr3_4:73394803-73394822 | None:intergenic | 10.0% |
| !! | ATAAAATTATAATTCAGATG+GGG | - | chr3_4:73393790-73393809 | None:intergenic | 15.0% |
| !! | ACATTAAACTAAACTTAAAT+TGG | + | chr3_4:73393949-73393968 | Msa0520860:intron | 15.0% |
| !!! | AGTACAATATACTTTAATTT+TGG | - | chr3_4:73394723-73394742 | None:intergenic | 15.0% |
| !!! | AAAATATTGATTAATGTGTT+TGG | + | chr3_4:73394824-73394843 | Msa0520860:intron | 15.0% |
| !!! | AAATATTGATTAATGTGTTT+GGG | + | chr3_4:73394825-73394844 | Msa0520860:intron | 15.0% |
| !! | TTCATCATGTTATAATTATT+AGG | + | chr3_4:73394916-73394935 | Msa0520860:intron | 15.0% |
| !! | TCATCATGTTATAATTATTA+GGG | + | chr3_4:73394917-73394936 | Msa0520860:intron | 15.0% |
| !! | ATAAAATCATAAATTGAACA+CGG | - | chr3_4:73395528-73395547 | None:intergenic | 15.0% |
| !!! | ATTGTTTAAGTTTATAATCT+AGG | + | chr3_4:73395564-73395583 | Msa0520860:intron | 15.0% |
| !!! | TTTTTAAGAAATGTATATCA+GGG | - | chr3_4:73395652-73395671 | None:intergenic | 15.0% |
| !!! | ATTTTTAAGAAATGTATATC+AGG | - | chr3_4:73395653-73395672 | None:intergenic | 15.0% |
| !! | CAGTTATAATATATTAAAGT+TGG | + | chr3_4:73396069-73396088 | Msa0520860:three_prime_UTR | 15.0% |
| !!! | AATATATTAAAGTTGGATTT+TGG | + | chr3_4:73396076-73396095 | Msa0520860:three_prime_UTR | 15.0% |
| !! | ATAGAACAAGAAAATTAAGT+TGG | - | chr3_4:73392638-73392657 | None:intergenic | 20.0% |
| !! | AAGTTCAAAATATAAGATGA+TGG | + | chr3_4:73392945-73392964 | Msa0520860:intron | 20.0% |
| !! | AAGTCTAAGCTAATAAAAAA+GGG | - | chr3_4:73393129-73393148 | None:intergenic | 20.0% |
| !! | CATAAATTAATTAACCAAGT+CGG | + | chr3_4:73394022-73394041 | Msa0520860:intron | 20.0% |
| !!! | ATATTATGTTAGTTTTTCTC+AGG | - | chr3_4:73394154-73394173 | None:intergenic | 20.0% |
| !! | TTTGGAAAAAAAAATATGTG+AGG | - | chr3_4:73394205-73394224 | None:intergenic | 20.0% |
| !! | AAATCTTAAAAATGTAGGAT+TGG | - | chr3_4:73394425-73394444 | None:intergenic | 20.0% |
| !! | GTAGAATTAGTAAAATACTT+CGG | - | chr3_4:73394650-73394669 | None:intergenic | 20.0% |
| !!! | TAAAATGCTTTAAAAATTGG+AGG | - | chr3_4:73394800-73394819 | None:intergenic | 20.0% |
| !! | CATCATGTTATAATTATTAG+GGG | + | chr3_4:73394918-73394937 | Msa0520860:intron | 20.0% |
| !! | AAGGGAAAAAATTATATTTG+TGG | + | chr3_4:73395205-73395224 | Msa0520860:intron | 20.0% |
| !! | TAAAATCATAAATTGAACAC+GGG | - | chr3_4:73395527-73395546 | None:intergenic | 20.0% |
| !!! | TTGTTTCTGTTAGAATTTTA+TGG | + | chr3_4:73395613-73395632 | Msa0520860:intron | 20.0% |
| !! | ATTTCATTAGTTAGATGTTT+AGG | + | chr3_4:73395925-73395944 | Msa0520860:three_prime_UTR | 20.0% |
| !! | ATTTAAAAGCCCTAGATTTT+AGG | + | chr3_4:73392287-73392306 | Msa0520860:five_prime_UTR | 25.0% |
| ! | AAAACTGTTGAAAATGTGAA+CGG | - | chr3_4:73392460-73392479 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGCAGTGAAATTG+AGG | + | chr3_4:73392669-73392688 | Msa0520860:intron | 25.0% |
| !!! | GATTTTTGTTGTGTATTTTC+AGG | + | chr3_4:73392798-73392817 | Msa0520860:intron | 25.0% |
| !!! | AAGATGATGGATATTTGAAT+TGG | + | chr3_4:73392958-73392977 | Msa0520860:intron | 25.0% |
| ! | ACACTGATGATAATTTAAGA+AGG | + | chr3_4:73393038-73393057 | Msa0520860:intron | 25.0% |
| !! | ATGATAATTTAAGAAGGTGT+TGG | + | chr3_4:73393044-73393063 | Msa0520860:intron | 25.0% |
| !!! | TGATAATTTAAGAAGGTGTT+GGG | + | chr3_4:73393045-73393064 | Msa0520860:intron | 25.0% |
| ! | AGTCTAAGCTAATAAAAAAG+GGG | - | chr3_4:73393128-73393147 | None:intergenic | 25.0% |
| ! | CAAGTCTAAGCTAATAAAAA+AGG | - | chr3_4:73393130-73393149 | None:intergenic | 25.0% |
| ! | TTATTTCATATGCAGAACAA+CGG | + | chr3_4:73393375-73393394 | Msa0520860:intron | 25.0% |
| ! | TTACACTCGTAAAGTAAATA+AGG | - | chr3_4:73393707-73393726 | None:intergenic | 25.0% |
| !!! | ACGATTTGATAATGCATTTT+AGG | + | chr3_4:73393811-73393830 | Msa0520860:intron | 25.0% |
| !!! | CGATTTGATAATGCATTTTA+GGG | + | chr3_4:73393812-73393831 | Msa0520860:intron | 25.0% |
| !!! | GATTTGATAATGCATTTTAG+GGG | + | chr3_4:73393813-73393832 | Msa0520860:intron | 25.0% |
| ! | AAAAAATATGTGAGGAGATT+TGG | - | chr3_4:73394197-73394216 | None:intergenic | 25.0% |
| !! | ATTTACTGTTATTTAACAGC+TGG | + | chr3_4:73394671-73394690 | Msa0520860:intron | 25.0% |
| ! | TAATCTTTGGATATGTATCT+AGG | - | chr3_4:73394776-73394795 | None:intergenic | 25.0% |
| ! | AAAAATTGGAGGATAATCTT+TGG | - | chr3_4:73394789-73394808 | None:intergenic | 25.0% |
| !! | TGGAGTTGTATCTAAAATTA+TGG | - | chr3_4:73394860-73394879 | None:intergenic | 25.0% |
| !! | ACAGATTTTACATTGAAGTT+TGG | + | chr3_4:73395361-73395380 | Msa0520860:intron | 25.0% |
| ! | TTACATTGAAGTTTGGAAAA+TGG | + | chr3_4:73395368-73395387 | Msa0520860:intron | 25.0% |
| AGGGGGAATAAGAAAAATTA+CGG | + | chr3_4:73392237-73392256 | Msa0520860:five_prime_UTR | 30.0% | |
| GCAGAAAAACCTAAAATCTA+GGG | - | chr3_4:73392299-73392318 | None:intergenic | 30.0% | |
| TTCAACACAAAAATGGTGAA+AGG | + | chr3_4:73392353-73392372 | Msa0520860:exon | 30.0% | |
| TACCCTTATTCAAATCTAGA+AGG | - | chr3_4:73392858-73392877 | None:intergenic | 30.0% | |
| ACATGTTAACCTTCAATATG+AGG | + | chr3_4:73393082-73393101 | Msa0520860:intron | 30.0% | |
| TTAGCTTAGACTTGTAGTAT+TGG | + | chr3_4:73393136-73393155 | Msa0520860:intron | 30.0% | |
| ! | TGATTGTGTTTTCGTGATTT+TGG | + | chr3_4:73393165-73393184 | Msa0520860:intron | 30.0% |
| TGAGAATTCAACATAGTAGA+AGG | - | chr3_4:73393216-73393235 | None:intergenic | 30.0% | |
| TAACTTGGTTTATTGCTTCT+AGG | + | chr3_4:73393292-73393311 | Msa0520860:CDS | 30.0% | |
| AACTTGGTTTATTGCTTCTA+GGG | + | chr3_4:73393293-73393312 | Msa0520860:CDS | 30.0% | |
| TACATGCAATGTGATCAAAA+TGG | - | chr3_4:73393342-73393361 | None:intergenic | 30.0% | |
| ATTGCATGTATGTAAAGAAG+TGG | + | chr3_4:73393352-73393371 | Msa0520860:intron | 30.0% | |
| !! | GAACTTTTTGGTGGTAATAA+TGG | + | chr3_4:73393545-73393564 | Msa0520860:CDS | 30.0% |
| ATCCCAAGTTTGAAAACATT+GGG | - | chr3_4:73393869-73393888 | None:intergenic | 30.0% | |
| !!! | AGTTGATTTTTTTCCACCTA+TGG | + | chr3_4:73394066-73394085 | Msa0520860:intron | 30.0% |
| !!! | ATTTTTTTCCACCTATGGTT+AGG | + | chr3_4:73394071-73394090 | Msa0520860:intron | 30.0% |
| AATTAGAAAGACCTAACCAT+AGG | - | chr3_4:73394085-73394104 | None:intergenic | 30.0% | |
| GGGCAAAATCTTAAAAATGT+AGG | - | chr3_4:73394430-73394449 | None:intergenic | 30.0% | |
| !! | TACAATCCTACAAGTTTTGA+AGG | - | chr3_4:73394535-73394554 | None:intergenic | 30.0% |
| ACTTATCTGTTCATTCTTTG+AGG | + | chr3_4:73394948-73394967 | Msa0520860:intron | 30.0% | |
| GATGTAAGGAATAAAAAACG+TGG | + | chr3_4:73394970-73394989 | Msa0520860:intron | 30.0% | |
| TGTCGGTATCACAAAAAATT+AGG | - | chr3_4:73395180-73395199 | None:intergenic | 30.0% | |
| !!! | ATTTTTTCCCTTATCAGTGT+CGG | - | chr3_4:73395197-73395216 | None:intergenic | 30.0% |
| TTAGTTAGATGTTTAGGCTT+TGG | + | chr3_4:73395931-73395950 | Msa0520860:three_prime_UTR | 30.0% | |
| ! | TAAAGTTGGATTTTGGATGT+TGG | + | chr3_4:73396083-73396102 | Msa0520860:three_prime_UTR | 30.0% |
| GGCAGAAAAACCTAAAATCT+AGG | - | chr3_4:73392300-73392319 | None:intergenic | 35.0% | |
| CGAGACATTCAACACAAAAA+TGG | + | chr3_4:73392346-73392365 | Msa0520860:exon | 35.0% | |
| TCAAACAGAGTAAGCAACAA+GGG | - | chr3_4:73392780-73392799 | None:intergenic | 35.0% | |
| ATCAAACAGAGTAAGCAACA+AGG | - | chr3_4:73392781-73392800 | None:intergenic | 35.0% | |
| ACGCCTTCTAGATTTGAATA+AGG | + | chr3_4:73392852-73392871 | Msa0520860:CDS | 35.0% | |
| CGCCTTCTAGATTTGAATAA+GGG | + | chr3_4:73392853-73392872 | Msa0520860:CDS | 35.0% | |
| TAACCTTCAATATGAGGTGT+TGG | + | chr3_4:73393088-73393107 | Msa0520860:intron | 35.0% | |
| ACTTGGTTTATTGCTTCTAG+GGG | + | chr3_4:73393294-73393313 | Msa0520860:CDS | 35.0% | |
| AGAATGAGGAACTTAAGTAG+CGG | + | chr3_4:73393401-73393420 | Msa0520860:CDS | 35.0% | |
| !! | CTTTTTGGTGGTAATAATGG+CGG | + | chr3_4:73393548-73393567 | Msa0520860:CDS | 35.0% |
| TGGTAATAATGGCGGTATTA+AGG | + | chr3_4:73393556-73393575 | Msa0520860:CDS | 35.0% | |
| GGTAATAATGGCGGTATTAA+GGG | + | chr3_4:73393557-73393576 | Msa0520860:CDS | 35.0% | |
| GTAATAATGGCGGTATTAAG+GGG | + | chr3_4:73393558-73393577 | Msa0520860:CDS | 35.0% | |
| GACATGTTGTCAATTTGAAG+TGG | - | chr3_4:73393584-73393603 | None:intergenic | 35.0% | |
| GACAATCTTTCAGAAGATGA+CGG | + | chr3_4:73393626-73393645 | Msa0520860:CDS | 35.0% | |
| AGTTCAGAAATTCAGGTCAT+GGG | - | chr3_4:73393662-73393681 | None:intergenic | 35.0% | |
| TAGTTCAGAAATTCAGGTCA+TGG | - | chr3_4:73393663-73393682 | None:intergenic | 35.0% | |
| TGACCTGAATTTCTGAACTA+TGG | + | chr3_4:73393663-73393682 | Msa0520860:exon | 35.0% | |
| CTACCATAGTTCAGAAATTC+AGG | - | chr3_4:73393669-73393688 | None:intergenic | 35.0% | |
| CAGTGCGGATTTACAAATTA+GGG | + | chr3_4:73393749-73393768 | Msa0520860:intron | 35.0% | |
| ! | AGACCCAATGTTTTCAAACT+TGG | + | chr3_4:73393863-73393882 | Msa0520860:intron | 35.0% |
| ! | GACCCAATGTTTTCAAACTT+GGG | + | chr3_4:73393864-73393883 | Msa0520860:intron | 35.0% |
| GATCCCAAGTTTGAAAACAT+TGG | - | chr3_4:73393870-73393889 | None:intergenic | 35.0% | |
| !!! | TAGTTTTTTCACTTCCGACT+TGG | - | chr3_4:73394039-73394058 | None:intergenic | 35.0% |
| ACGTCAGCATATTATAAGAG+GGG | - | chr3_4:73394264-73394283 | None:intergenic | 35.0% | |
| CACGTCAGCATATTATAAGA+GGG | - | chr3_4:73394265-73394284 | None:intergenic | 35.0% | |
| TCACGTCAGCATATTATAAG+AGG | - | chr3_4:73394266-73394285 | None:intergenic | 35.0% | |
| GGTTACATAGAAGAAACAAC+AGG | + | chr3_4:73394336-73394355 | Msa0520860:intron | 35.0% | |
| AACAACAGGACTTAGTAAAC+TGG | + | chr3_4:73394350-73394369 | Msa0520860:intron | 35.0% | |
| ACAACAGGACTTAGTAAACT+GGG | + | chr3_4:73394351-73394370 | Msa0520860:intron | 35.0% | |
| AAGCATCAGATTTGGATTAC+GGG | - | chr3_4:73394450-73394469 | None:intergenic | 35.0% | |
| CAAGCATCAGATTTGGATTA+CGG | - | chr3_4:73394451-73394470 | None:intergenic | 35.0% | |
| TTGTATCGTTCGATTGTACA+AGG | + | chr3_4:73394550-73394569 | Msa0520860:intron | 35.0% | |
| ACGATATTGACAACATTGTG+TGG | + | chr3_4:73394579-73394598 | Msa0520860:intron | 35.0% | |
| ACATTGTGTGGACATTAGAT+AGG | + | chr3_4:73394591-73394610 | Msa0520860:intron | 35.0% | |
| ! | TTTGGAGTTTCTGAACTTTG+TGG | - | chr3_4:73394705-73394724 | None:intergenic | 35.0% |
| ATGAAGAAGAAAGCTGTACA+AGG | - | chr3_4:73394901-73394920 | None:intergenic | 35.0% | |
| ! | GTTCATTCTTTGAGGATGTA+AGG | + | chr3_4:73394956-73394975 | Msa0520860:intron | 35.0% |
| GTACGCAATAAACTTGATGA+TGG | + | chr3_4:73395014-73395033 | Msa0520860:intron | 35.0% | |
| AAAATCGATAAGCAAGTGCA+TGG | - | chr3_4:73395499-73395518 | None:intergenic | 35.0% | |
| TCAATTCACACACACATAAC+TGG | + | chr3_4:73395893-73395912 | Msa0520860:three_prime_UTR | 35.0% | |
| !! | AGATGTTTAGGCTTTGGATT+TGG | + | chr3_4:73395937-73395956 | Msa0520860:three_prime_UTR | 35.0% |
| TGCTTCAATTTGTGTTGTAC+TGG | + | chr3_4:73395986-73396005 | Msa0520860:three_prime_UTR | 35.0% | |
| ! | TCAATTTGTGTTGTACTGGT+TGG | + | chr3_4:73395990-73396009 | Msa0520860:three_prime_UTR | 35.0% |
| !! | CAATTTGTGTTGTACTGGTT+GGG | + | chr3_4:73395991-73396010 | Msa0520860:three_prime_UTR | 35.0% |
| AACTGAAATTCCATACAGTG+TGG | - | chr3_4:73396054-73396073 | None:intergenic | 35.0% | |
| GAACTTCAACACTGTTACTG+CGG | - | chr3_4:73392327-73392346 | None:intergenic | 40.0% | |
| TGAACGGAATTCACGAAGAT+TGG | - | chr3_4:73392444-73392463 | None:intergenic | 40.0% | |
| AGAGTTTGAGGGTTCATAAG+AGG | - | chr3_4:73392485-73392504 | None:intergenic | 40.0% | |
| ATGATGATTACGTGTGAGGA+GGG | - | chr3_4:73392570-73392589 | None:intergenic | 40.0% | |
| GAAGATGATGATTACGTGTG+AGG | - | chr3_4:73392574-73392593 | None:intergenic | 40.0% | |
| GATTTGACAGGGTTATCATC+TGG | - | chr3_4:73392710-73392729 | None:intergenic | 40.0% | |
| ! | TCACAAGCTCTGATTTGACA+GGG | - | chr3_4:73392721-73392740 | None:intergenic | 40.0% |
| ATCATCAGTGTCTATGTGTC+AGG | - | chr3_4:73393029-73393048 | None:intergenic | 40.0% | |
| AACATAGTAGAAGGTCGCAA+TGG | - | chr3_4:73393207-73393226 | None:intergenic | 40.0% | |
| GCAGCTTGAACAGAAATAGA+TGG | - | chr3_4:73393494-73393513 | None:intergenic | 40.0% | |
| ! | AAAGCACAGAGGGAACTTTT+TGG | + | chr3_4:73393533-73393552 | Msa0520860:CDS | 40.0% |
| GCAGTGCGGATTTACAAATT+AGG | + | chr3_4:73393748-73393767 | Msa0520860:intron | 40.0% | |
| TGTGACAAAGGATCATAGCA+CGG | + | chr3_4:73393909-73393928 | Msa0520860:intron | 40.0% | |
| TAGAAAGACCTAACCATAGG+TGG | - | chr3_4:73394082-73394101 | None:intergenic | 40.0% | |
| ! | AGGAGATTTGGTAGAGACAT+TGG | - | chr3_4:73394185-73394204 | None:intergenic | 40.0% |
| TTATAAGAGGGGGAACGAAT+GGG | - | chr3_4:73394253-73394272 | None:intergenic | 40.0% | |
| ATTATAAGAGGGGGAACGAA+TGG | - | chr3_4:73394254-73394273 | None:intergenic | 40.0% | |
| CGTCAGCATATTATAAGAGG+GGG | - | chr3_4:73394263-73394282 | None:intergenic | 40.0% | |
| TTATGGGCAAGCATCAGATT+TGG | - | chr3_4:73394458-73394477 | None:intergenic | 40.0% | |
| !! | TAGGATCAGGTTGGGATTAT+GGG | - | chr3_4:73394474-73394493 | None:intergenic | 40.0% |
| CTTGAGCCTTCAAAACTTGT+AGG | + | chr3_4:73394526-73394545 | Msa0520860:intron | 40.0% | |
| ATATGATGCTGATATGCCCA+CGG | + | chr3_4:73394746-73394765 | Msa0520860:intron | 40.0% | |
| !! | TATGTATCTAGGAGTACCGT+GGG | - | chr3_4:73394765-73394784 | None:intergenic | 40.0% |
| !! | ATATGTATCTAGGAGTACCG+TGG | - | chr3_4:73394766-73394785 | None:intergenic | 40.0% |
| ! | GGATCTTCAAGGCAAGTTTT+TGG | - | chr3_4:73394880-73394899 | None:intergenic | 40.0% |
| AAGCTGTACAAGGATCTTCA+AGG | - | chr3_4:73394891-73394910 | None:intergenic | 40.0% | |
| TTTAATGCAGAGTCGTTGCT+TGG | + | chr3_4:73395042-73395061 | Msa0520860:intron | 40.0% | |
| TTGTGATACCGACACTGATA+AGG | + | chr3_4:73395186-73395205 | Msa0520860:intron | 40.0% | |
| TGTGATACCGACACTGATAA+GGG | + | chr3_4:73395187-73395206 | Msa0520860:intron | 40.0% | |
| CTGTAACTTTCCTTTGCCAA+TGG | + | chr3_4:73395792-73395811 | Msa0520860:three_prime_UTR | 40.0% | |
| ATGTGTGTGTGAATTGAGAG+AGG | - | chr3_4:73395890-73395909 | None:intergenic | 40.0% | |
| CACACACATAACTGGACATA+TGG | + | chr3_4:73395901-73395920 | Msa0520860:three_prime_UTR | 40.0% | |
| AATTCCATACAGTGTGGATG+AGG | - | chr3_4:73396048-73396067 | None:intergenic | 40.0% | |
| ! | AGTTGGATTTTGGATGTTGG+TGG | + | chr3_4:73396086-73396105 | Msa0520860:three_prime_UTR | 40.0% |
| GGAAGTGAAAGTGAAAGCTG+TGG | + | chr3_4:73392374-73392393 | Msa0520860:CDS | 45.0% | |
| AGTGAAAGTGAAAGCTGTGG+AGG | + | chr3_4:73392377-73392396 | Msa0520860:CDS | 45.0% | |
| TTCACGAAGATTGGAGAGAG+TGG | - | chr3_4:73392435-73392454 | None:intergenic | 45.0% | |
| GAAGTTGGGAGAGAGTTTGA+GGG | - | chr3_4:73392496-73392515 | None:intergenic | 45.0% | |
| ACGTTCAAGAGGTGGAAGTT+GGG | - | chr3_4:73392510-73392529 | None:intergenic | 45.0% | |
| !! | GGGTAGAAGTGATTTTGGAG+AGG | - | chr3_4:73392550-73392569 | None:intergenic | 45.0% |
| ! | GAGGAGGGTAGAAGTGATTT+TGG | - | chr3_4:73392555-73392574 | None:intergenic | 45.0% |
| GATGATGATTACGTGTGAGG+AGG | - | chr3_4:73392571-73392590 | None:intergenic | 45.0% | |
| ! | CTCACAAGCTCTGATTTGAC+AGG | - | chr3_4:73392722-73392741 | None:intergenic | 45.0% |
| CAGAGTAAGCAACAAGGGTT+AGG | - | chr3_4:73392775-73392794 | None:intergenic | 45.0% | |
| GCACCAACACCTCATATTGA+AGG | - | chr3_4:73393094-73393113 | None:intergenic | 45.0% | |
| AACCAAGTTAACAACCCACC+TGG | - | chr3_4:73393282-73393301 | None:intergenic | 45.0% | |
| ! | TGGTTTATTGCTTCTAGGGG+TGG | + | chr3_4:73393297-73393316 | Msa0520860:CDS | 45.0% |
| GGGAAAGAAGAGGAAACATC+AGG | + | chr3_4:73393427-73393446 | Msa0520860:CDS | 45.0% | |
| ! | AGTTTCTGGAGAAAGCACAG+AGG | + | chr3_4:73393522-73393541 | Msa0520860:CDS | 45.0% |
| ! | GTTTCTGGAGAAAGCACAGA+GGG | + | chr3_4:73393523-73393542 | Msa0520860:CDS | 45.0% |
| TCGTTATACTAGCTGCAGTG+CGG | + | chr3_4:73393734-73393753 | Msa0520860:intron | 45.0% | |
| TATAAGAGGGGGAACGAATG+GGG | - | chr3_4:73394252-73394271 | None:intergenic | 45.0% | |
| GAGTAAGAAGGACATTGCAG+AGG | + | chr3_4:73394288-73394307 | Msa0520860:intron | 45.0% | |
| AAGAAGGACATTGCAGAGGA+TGG | + | chr3_4:73394292-73394311 | Msa0520860:intron | 45.0% | |
| !! | TGTCCTGTCAAGGTTTGTTG+TGG | + | chr3_4:73394395-73394414 | Msa0520860:intron | 45.0% |
| AGTCCACAACAAACCTTGAC+AGG | - | chr3_4:73394401-73394420 | None:intergenic | 45.0% | |
| !! | CTAGGATCAGGTTGGGATTA+TGG | - | chr3_4:73394475-73394494 | None:intergenic | 45.0% |
| !!! | GTTTTTTTTCCCTTCTCCGC+AGG | + | chr3_4:73395753-73395772 | Msa0520860:intron | 45.0% |
| AACACAAGCTCCATTGGCAA+AGG | - | chr3_4:73395805-73395824 | None:intergenic | 45.0% | |
| !! | TTGTGTTGTACTGGTTGGGA+AGG | + | chr3_4:73395995-73396014 | Msa0520860:three_prime_UTR | 45.0% |
| CTTCAACACTGTTACTGCGG+TGG | - | chr3_4:73392324-73392343 | None:intergenic | 50.0% | |
| ACTGAATCCATCACCGCTTC+GGG | - | chr3_4:73392407-73392426 | None:intergenic | 50.0% | |
| GACTGAATCCATCACCGCTT+CGG | - | chr3_4:73392408-73392427 | None:intergenic | 50.0% | |
| GGAAGTTGGGAGAGAGTTTG+AGG | - | chr3_4:73392497-73392516 | None:intergenic | 50.0% | |
| CACGTTCAAGAGGTGGAAGT+TGG | - | chr3_4:73392511-73392530 | None:intergenic | 50.0% | |
| GGAGAGGAGAAAGAGAGAGT+GGG | - | chr3_4:73392534-73392553 | None:intergenic | 50.0% | |
| TGGAGAGGAGAAAGAGAGAG+TGG | - | chr3_4:73392535-73392554 | None:intergenic | 50.0% | |
| GCAGTGAAATTGAGGTGCAG+TGG | + | chr3_4:73392677-73392696 | Msa0520860:intron | 50.0% | |
| TTAACAACCCACCTGGAGTG+AGG | - | chr3_4:73393275-73393294 | None:intergenic | 50.0% | |
| !! | CTCCAGGTGGGTTGTTAACT+TGG | + | chr3_4:73393277-73393296 | Msa0520860:CDS | 50.0% |
| CAGAACAACGGCAGAGAATG+AGG | + | chr3_4:73393387-73393406 | Msa0520860:intron | 50.0% | |
| AGGAACTTAAGTAGCGGCGA+GGG | + | chr3_4:73393407-73393426 | Msa0520860:CDS | 50.0% | |
| GAAGAGGAAACATCAGGAGC+AGG | + | chr3_4:73393433-73393452 | Msa0520860:CDS | 50.0% | |
| TTCTGTTCAAGCTGCTGCTC+AGG | + | chr3_4:73393499-73393518 | Msa0520860:CDS | 50.0% | |
| ! | GCACAGAGGGAACTTTTTGG+TGG | + | chr3_4:73393536-73393555 | Msa0520860:CDS | 50.0% |
| TCAAACTTGGGATCCTGCCT+AGG | + | chr3_4:73393876-73393895 | Msa0520860:intron | 50.0% | |
| GATCCTTTGTCACACCCTTC+CGG | - | chr3_4:73393903-73393922 | None:intergenic | 50.0% | |
| ATAAGAGGGGGAACGAATGG+GGG | - | chr3_4:73394251-73394270 | None:intergenic | 50.0% | |
| GCTGACGTGAGAGAGTAAGA+AGG | + | chr3_4:73394276-73394295 | Msa0520860:intron | 50.0% | |
| AAGGACATTGCAGAGGATGG+AGG | + | chr3_4:73394295-73394314 | Msa0520860:intron | 50.0% | |
| CATTGCAGAGGATGGAGGAA+CGG | + | chr3_4:73394300-73394319 | Msa0520860:intron | 50.0% | |
| GATGGAGGAACGGATCGATA+AGG | + | chr3_4:73394310-73394329 | Msa0520860:intron | 50.0% | |
| AGGAACGGATCGATAAGGAG+AGG | + | chr3_4:73394315-73394334 | Msa0520860:intron | 50.0% | |
| GGACTTAGTAAACTGGGCTG+TGG | + | chr3_4:73394357-73394376 | Msa0520860:intron | 50.0% | |
| AAGCATGCTGAATCGTGAGC+GGG | - | chr3_4:73394509-73394528 | None:intergenic | 50.0% | |
| CAAGCATGCTGAATCGTGAG+CGG | - | chr3_4:73394510-73394529 | None:intergenic | 50.0% | |
| GCAACTTCTCAGGACACACA+AGG | - | chr3_4:73395462-73395481 | None:intergenic | 50.0% | |
| TGTGTGTCCTGAGAAGTTGC+AGG | + | chr3_4:73395462-73395481 | Msa0520860:intron | 50.0% | |
| TGCTCTTCCTGCAACTTCTC+AGG | - | chr3_4:73395472-73395491 | None:intergenic | 50.0% | |
| CTGACGAACACAAGCTCCAT+TGG | - | chr3_4:73395811-73395830 | None:intergenic | 50.0% | |
| TGGAGCTTGTGTTCGTCAGA+TGG | + | chr3_4:73395812-73395831 | Msa0520860:three_prime_UTR | 50.0% | |
| CATGCCTCATCCACACTGTA+TGG | + | chr3_4:73396041-73396060 | Msa0520860:three_prime_UTR | 50.0% | |
| CAACACTGTTACTGCGGTGG+AGG | - | chr3_4:73392321-73392340 | None:intergenic | 55.0% | |
| AGAGAGTGGGCACGTTCAAG+AGG | - | chr3_4:73392521-73392540 | None:intergenic | 55.0% | |
| TCTTTGCCTGACCTCACTCC+AGG | + | chr3_4:73393261-73393280 | Msa0520860:CDS | 55.0% | |
| GAGGAACTTAAGTAGCGGCG+AGG | + | chr3_4:73393406-73393425 | Msa0520860:CDS | 55.0% | |
| AGGAAACATCAGGAGCAGGC+TGG | + | chr3_4:73393437-73393456 | Msa0520860:CDS | 55.0% | |
| ! | AGGAGCAGGCTGGTCAAAAG+AGG | + | chr3_4:73393447-73393466 | Msa0520860:CDS | 55.0% |
| AGCTGCTGCTCAGGAGTTTC+TGG | + | chr3_4:73393508-73393527 | Msa0520860:CDS | 55.0% | |
| GGAACGAATGGGGGAATAGG+CGG | - | chr3_4:73394242-73394261 | None:intergenic | 55.0% | |
| GTAAACTGGGCTGTGGAACC+TGG | + | chr3_4:73394364-73394383 | Msa0520860:intron | 55.0% | |
| TGACAGGACAGTTTCCAGCC+AGG | - | chr3_4:73394385-73394404 | None:intergenic | 55.0% | |
| GGCTGGAAACTGTCCTGTCA+AGG | + | chr3_4:73394385-73394404 | Msa0520860:intron | 55.0% | |
| !! | CGGAGCTCTAGGATCAGGTT+GGG | - | chr3_4:73394482-73394501 | None:intergenic | 55.0% |
| !! | ACGGAGCTCTAGGATCAGGT+TGG | - | chr3_4:73394483-73394502 | None:intergenic | 55.0% |
| !! | GATCACGGAGCTCTAGGATC+AGG | - | chr3_4:73394487-73394506 | None:intergenic | 55.0% |
| CTGAATCGTGAGCGGGATCA+CGG | - | chr3_4:73394502-73394521 | None:intergenic | 55.0% | |
| !! | CTGTGGAGGAGTACCCGAAG+CGG | + | chr3_4:73392391-73392410 | Msa0520860:CDS | 60.0% |
| !! | AGGAGTACCCGAAGCGGTGA+TGG | + | chr3_4:73392397-73392416 | Msa0520860:CDS | 60.0% |
| GAGTGGGCACGTTCAAGAGG+TGG | - | chr3_4:73392518-73392537 | None:intergenic | 60.0% | |
| TTGCCTGACCTCACTCCAGG+TGG | + | chr3_4:73393264-73393283 | Msa0520860:CDS | 60.0% | |
| TGCCTGACCTCACTCCAGGT+GGG | + | chr3_4:73393265-73393284 | Msa0520860:CDS | 60.0% | |
| AACCCACCTGGAGTGAGGTC+AGG | - | chr3_4:73393270-73393289 | None:intergenic | 60.0% | |
| GTAGCGGCGAGGGAAAGAAG+AGG | + | chr3_4:73393417-73393436 | Msa0520860:CDS | 60.0% | |
| CTTGGGATCCTGCCTAGGAC+CGG | + | chr3_4:73393881-73393900 | Msa0520860:intron | 60.0% | |
| GATCCTGCCTAGGACCGGAA+GGG | + | chr3_4:73393886-73393905 | Msa0520860:intron | 60.0% | |
| TGTCACACCCTTCCGGTCCT+AGG | - | chr3_4:73393896-73393915 | None:intergenic | 60.0% | |
| ! | GGACCGGAAGGGTGTGACAA+AGG | + | chr3_4:73393897-73393916 | Msa0520860:intron | 60.0% |
| GCGGCAGGGTTGCATGTGTT+TGG | - | chr3_4:73394223-73394242 | None:intergenic | 60.0% | |
| GAATGGGGGAATAGGCGGCA+GGG | - | chr3_4:73394237-73394256 | None:intergenic | 60.0% | |
| GGGGGAACGAATGGGGGAAT+AGG | - | chr3_4:73394245-73394264 | None:intergenic | 60.0% | |
| CCACACACACCTGCGGAGAA+GGG | - | chr3_4:73395765-73395784 | None:intergenic | 60.0% | |
| CCTTCTCCGCAGGTGTGTGT+GGG | + | chr3_4:73395763-73395782 | Msa0520860:intron | 60.0% | |
| ACCTCTCCCACACACACCTG+CGG | - | chr3_4:73395772-73395791 | None:intergenic | 60.0% | |
| GGATCCTGCCTAGGACCGGA+AGG | + | chr3_4:73393885-73393904 | Msa0520860:intron | 65.0% | |
| ACACCCTTCCGGTCCTAGGC+AGG | - | chr3_4:73393892-73393911 | None:intergenic | 65.0% | |
| CGAATGGGGGAATAGGCGGC+AGG | - | chr3_4:73394238-73394257 | None:intergenic | 65.0% | |
| ACTGGGCTGTGGAACCTGGC+TGG | + | chr3_4:73394368-73394387 | Msa0520860:intron | 65.0% | |
| GAGCGGGATCACGGAGCTCT+AGG | - | chr3_4:73394493-73394512 | None:intergenic | 65.0% | |
| CCCTTCTCCGCAGGTGTGTG+TGG | + | chr3_4:73395762-73395781 | Msa0520860:intron | 65.0% | |
| CCCACACACACCTGCGGAGA+AGG | - | chr3_4:73395766-73395785 | None:intergenic | 65.0% | |
| TCCGCAGGTGTGTGTGGGAG+AGG | + | chr3_4:73395768-73395787 | Msa0520860:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 73392226 | 73396110 | 73392226 | ID=Msa0520860;Name=Msa0520860 |
| chr3_4 | mRNA | 73392226 | 73396110 | 73392226 | ID=Msa0520860-mRNA-1;Parent=Msa0520860;Name=Msa0520860-mRNA-1;_AED=0.04;_eAED=0.04;_QI=139|0.8|0.83|1|0.8|0.66|6|350|240 |
| chr3_4 | exon | 73392226 | 73392578 | 73392226 | ID=Msa0520860-mRNA-1:exon:20593;Parent=Msa0520860-mRNA-1 |
| chr3_4 | exon | 73392681 | 73392736 | 73392681 | ID=Msa0520860-mRNA-1:exon:20594;Parent=Msa0520860-mRNA-1 |
| chr3_4 | exon | 73392820 | 73392874 | 73392820 | ID=Msa0520860-mRNA-1:exon:20595;Parent=Msa0520860-mRNA-1 |
| chr3_4 | exon | 73393202 | 73393318 | 73393202 | ID=Msa0520860-mRNA-1:exon:20596;Parent=Msa0520860-mRNA-1 |
| chr3_4 | exon | 73393390 | 73393684 | 73393390 | ID=Msa0520860-mRNA-1:exon:20597;Parent=Msa0520860-mRNA-1 |
| chr3_4 | exon | 73395775 | 73396110 | 73395775 | ID=Msa0520860-mRNA-1:exon:20598;Parent=Msa0520860-mRNA-1 |
| chr3_4 | five_prime_UTR | 73392226 | 73392364 | 73392226 | ID=Msa0520860-mRNA-1:five_prime_utr;Parent=Msa0520860-mRNA-1 |
| chr3_4 | CDS | 73392365 | 73392578 | 73392365 | ID=Msa0520860-mRNA-1:cds;Parent=Msa0520860-mRNA-1 |
| chr3_4 | CDS | 73392681 | 73392736 | 73392681 | ID=Msa0520860-mRNA-1:cds;Parent=Msa0520860-mRNA-1 |
| chr3_4 | CDS | 73392820 | 73392874 | 73392820 | ID=Msa0520860-mRNA-1:cds;Parent=Msa0520860-mRNA-1 |
| chr3_4 | CDS | 73393202 | 73393318 | 73393202 | ID=Msa0520860-mRNA-1:cds;Parent=Msa0520860-mRNA-1 |
| chr3_4 | CDS | 73393390 | 73393670 | 73393390 | ID=Msa0520860-mRNA-1:cds;Parent=Msa0520860-mRNA-1 |
| chr3_4 | three_prime_UTR | 73393671 | 73393684 | 73393671 | ID=Msa0520860-mRNA-1:three_prime_utr;Parent=Msa0520860-mRNA-1 |
| chr3_4 | three_prime_UTR | 73395775 | 73396110 | 73395775 | ID=Msa0520860-mRNA-1:three_prime_utr;Parent=Msa0520860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
