Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434010 | XP_003603610.1 | 96.283 | 565 | 21 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434010 | sp|Q8LIY8|CCD8B_ORYSJ | 78.261 | 483 | 105 | 0 | 83 | 565 | 83 | 565 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434010 | G7J3F4 | 96.283 | 565 | 21 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1143 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0383640 | Msa0434010 | 0.924354 | 7.884243e-90 | -8.615850e-47 |
| Msa0434010 | Msa0521870 | 0.966179 | 1.412686e-125 | -8.615850e-47 |
| Msa0434010 | Msa1154320 | 0.800559 | 1.361940e-48 | -8.615850e-47 |
| Msa0434010 | Msa1454190 | 0.976264 | 1.708992e-141 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434010 | MtrunA17_Chr3g0140171 | 96.283 | 565 | 21 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1143 |
| Msa0434010 | MtrunA17_Chr7g0239811 | 97.162 | 458 | 13 | 0 | 108 | 565 | 3 | 460 | 0.0 | 935 |
| Msa0434010 | MtrunA17_Chr7g0239801 | 84.112 | 107 | 17 | 0 | 1 | 107 | 1 | 107 | 7.51e-60 | 195 |
| Msa0434010 | MtrunA17_Chr5g0407931 | 25.651 | 499 | 289 | 22 | 97 | 562 | 160 | 609 | 9.20e-27 | 114 |
| Msa0434010 | MtrunA17_Chr5g0407941 | 25.749 | 501 | 284 | 24 | 98 | 562 | 120 | 568 | 2.75e-26 | 113 |
| Msa0434010 | MtrunA17_Chr5g0407951 | 25.963 | 493 | 294 | 22 | 98 | 562 | 121 | 570 | 5.77e-24 | 105 |
| Msa0434010 | MtrunA17_Chr2g0312951 | 24.644 | 491 | 305 | 22 | 97 | 562 | 151 | 601 | 1.85e-21 | 98.6 |
| Msa0434010 | MtrunA17_Chr8g0352261 | 23.715 | 506 | 306 | 21 | 96 | 562 | 100 | 564 | 3.51e-21 | 97.4 |
| Msa0434010 | MtrunA17_Chr8g0352321 | 24.405 | 504 | 313 | 23 | 96 | 565 | 63 | 532 | 5.05e-20 | 93.6 |
| Msa0434010 | MtrunA17_Chr8g0352301 | 23.622 | 508 | 304 | 22 | 96 | 562 | 100 | 564 | 1.27e-19 | 92.4 |
| Msa0434010 | MtrunA17_Chr8g0376401 | 25.519 | 482 | 308 | 24 | 97 | 562 | 151 | 597 | 1.41e-18 | 89.4 |
| Msa0434010 | MtrunA17_Chr8g0352311 | 23.969 | 509 | 301 | 23 | 96 | 562 | 101 | 565 | 8.57e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0434010 | AT4G32810.1 | 69.094 | 508 | 149 | 5 | 64 | 564 | 63 | 569 | 0.0 | 757 |
| Msa0434010 | AT4G32810.2 | 65.730 | 534 | 149 | 6 | 64 | 564 | 63 | 595 | 0.0 | 742 |
| Msa0434010 | AT1G30100.1 | 26.744 | 516 | 318 | 22 | 71 | 562 | 101 | 580 | 5.42e-28 | 119 |
| Msa0434010 | AT3G24220.1 | 26.306 | 517 | 320 | 23 | 66 | 562 | 92 | 567 | 1.68e-24 | 108 |
| Msa0434010 | AT3G63520.1 | 25.889 | 506 | 300 | 25 | 96 | 565 | 64 | 530 | 6.27e-23 | 103 |
| Msa0434010 | AT3G14440.1 | 23.611 | 504 | 344 | 19 | 73 | 562 | 113 | 589 | 2.73e-19 | 92.0 |
| Msa0434010 | AT4G18350.1 | 23.938 | 518 | 327 | 24 | 73 | 562 | 96 | 574 | 1.32e-16 | 83.6 |
Find 180 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAACCTTCGCTCATTTAA+TGG | 0.163091 | 3_2:+86736265 | Msa0434010:CDS |
| TACTTCAACCCTAGATAATT+AGG | 0.195998 | 3_2:-86736529 | None:intergenic |
| CCCCATTTCAAAGCAAAATA+TGG | 0.236830 | 3_2:+86732532 | Msa0434010:CDS |
| CAATACCTCAATGGCATTTC+AGG | 0.243692 | 3_2:-86735892 | None:intergenic |
| ATTTGAGTATAGTGATTCTT+TGG | 0.245117 | 3_2:+86735663 | Msa0434010:CDS |
| ATGTAAAATTAGCGATTATA+TGG | 0.248887 | 3_2:+86737270 | Msa0434010:three_prime_UTR |
| ATGCCTTTCCCATGTTCATT+TGG | 0.256695 | 3_2:-86736487 | None:intergenic |
| TGCCTTTCCCATGTTCATTT+GGG | 0.293559 | 3_2:-86736486 | None:intergenic |
| GCCAGAGCTAAGTTCCCTTA+TGG | 0.303157 | 3_2:+86736973 | Msa0434010:CDS |
| CTTCATATGCATTTATGAAA+TGG | 0.332304 | 3_2:-86736153 | None:intergenic |
| TCCCCTATGTTCCACATACC+TGG | 0.339270 | 3_2:-86735301 | None:intergenic |
| CGAAACAAGGGCATCTATAA+AGG | 0.339727 | 3_2:+86732602 | Msa0434010:CDS |
| CCAATTGTCTCCAATGTGTC+GGG | 0.341840 | 3_2:-86735637 | None:intergenic |
| TCATACATGTACTTCCGTTA+TGG | 0.342945 | 3_2:-86737191 | None:intergenic |
| ACTTCAACCCTAGATAATTA+GGG | 0.351152 | 3_2:-86736528 | None:intergenic |
| TCTAATGAGAGGAAGGTTAT+TGG | 0.352894 | 3_2:+86735793 | Msa0434010:CDS |
| GACTGTTGTCATTATCGTAT+TGG | 0.353383 | 3_2:+86737052 | Msa0434010:three_prime_UTR |
| CATATGGATTGCATGGATGC+TGG | 0.364734 | 3_2:+86737001 | Msa0434010:CDS |
| TGTCTGACGGAGACACAAAA+AGG | 0.364914 | 3_2:+86735598 | Msa0434010:CDS |
| CTAGTATCTCTCAAGAGAAA+TGG | 0.369443 | 3_2:+86732753 | Msa0434010:CDS |
| TTCCCTTATGGACTTCCATA+TGG | 0.378303 | 3_2:+86736985 | Msa0434010:CDS |
| GTAACCTTGGTGAGGGTGTT+GGG | 0.379272 | 3_2:-86736595 | None:intergenic |
| ATGGGGTTTCGTATTATAGA+TGG | 0.382685 | 3_2:-86732515 | None:intergenic |
| ACATGCTTGATAACACTTGT+AGG | 0.384774 | 3_2:+86732564 | Msa0434010:CDS |
| TTATTGGACGGGTCGATTGT+AGG | 0.384903 | 3_2:+86735809 | Msa0434010:CDS |
| TATTGGACGGGTCGATTGTA+GGG | 0.385865 | 3_2:+86735810 | Msa0434010:CDS |
| AGCATAAACCCTAATTATCT+AGG | 0.402596 | 3_2:+86736520 | Msa0434010:CDS |
| TTTGAGTATAGTGATTCTTT+GGG | 0.403929 | 3_2:+86735664 | Msa0434010:CDS |
| CACGCCTGTGTTGGCATTGT+CGG | 0.410914 | 3_2:-86735548 | None:intergenic |
| CATAACATGCATAAAAGCTT+TGG | 0.420483 | 3_2:-86735977 | None:intergenic |
| AAATGGAGAAGGATATGCTT+TGG | 0.421784 | 3_2:+86736921 | Msa0434010:CDS |
| CCCGACACATTGGAGACAAT+TGG | 0.425582 | 3_2:+86735637 | Msa0434010:CDS |
| CCTTATAAAACCAGGGTACT+TGG | 0.426403 | 3_2:+86735750 | Msa0434010:CDS |
| GCTGCTTCTAATGTTCCATA+TGG | 0.430345 | 3_2:-86736457 | None:intergenic |
| GGGCGGTACATCACCCGGTT+GGG | 0.432763 | 3_2:+86735831 | Msa0434010:CDS |
| GTCGGCCTTCACTTCGAGGA+CGG | 0.433069 | 3_2:+86735364 | Msa0434010:CDS |
| TAGTATCTCTCAAGAGAAAT+GGG | 0.438986 | 3_2:+86732754 | Msa0434010:CDS |
| AACTTCAGGCATCTCTTTGA+CGG | 0.439182 | 3_2:+86735328 | Msa0434010:CDS |
| TCCTCTGTTGCTCCTGGTCG+AGG | 0.440338 | 3_2:-86736779 | None:intergenic |
| ATAACATAGTGTTCAGTAAC+GGG | 0.440855 | 3_2:-86735865 | None:intergenic |
| TATGAAGAGGAAGATGAAGA+TGG | 0.442587 | 3_2:+86736169 | Msa0434010:CDS |
| CCACTGGATGGAAGTCCATA+TGG | 0.442857 | 3_2:+86736442 | Msa0434010:CDS |
| TCGGCCTTCACTTCGAGGAC+GGG | 0.453191 | 3_2:+86735365 | Msa0434010:CDS |
| TGTGTCGGGGTCTATCACTA+TGG | 0.455071 | 3_2:-86735623 | None:intergenic |
| TCCAATTGTCTCCAATGTGT+CGG | 0.457857 | 3_2:-86735638 | None:intergenic |
| CTTGGTCGGCCTTCACTTCG+AGG | 0.458257 | 3_2:+86735360 | Msa0434010:CDS |
| AATCCATATGGAAGTCCATA+AGG | 0.458996 | 3_2:-86736988 | None:intergenic |
| ACATAGGGGACTACAACTTC+AGG | 0.459853 | 3_2:+86735314 | Msa0434010:CDS |
| TCATCTTCCTCTGTTGCTCC+TGG | 0.464373 | 3_2:-86736785 | None:intergenic |
| TGGTGAAGCTCGGCGATGGG+AGG | 0.464890 | 3_2:+86735569 | Msa0434010:CDS |
| GCCCAGGTATGTGGAACATA+GGG | 0.467857 | 3_2:+86735299 | Msa0434010:CDS |
| TCCATGCAACATGGTGTTGA+TGG | 0.469071 | 3_2:-86732730 | None:intergenic |
| AATCAGAAAGGGCTAAGAAC+TGG | 0.469124 | 3_2:+86736717 | Msa0434010:CDS |
| TGAAATTTGTACAATGGAGT+TGG | 0.476527 | 3_2:-86735940 | None:intergenic |
| CAGCATCCATGCAATCCATA+TGG | 0.477535 | 3_2:-86737000 | None:intergenic |
| ATGAAGAGGAAGATGAAGAT+GGG | 0.478254 | 3_2:+86736170 | Msa0434010:CDS |
| GACGGGTACGCCACCTTGGT+CGG | 0.481643 | 3_2:+86735346 | Msa0434010:CDS |
| TGCAGAAAGGAACGTACATA+AGG | 0.482926 | 3_2:+86735272 | Msa0434010:intron |
| TTGGTGGCGAGGATGGAAAC+TGG | 0.483277 | 3_2:+86735769 | Msa0434010:CDS |
| AACTCGCTATCCGTGACAAT+GGG | 0.483621 | 3_2:-86735709 | None:intergenic |
| GAAGGAGAACTGCTTGTTCA+AGG | 0.484767 | 3_2:+86732776 | Msa0434010:CDS |
| GGGGCGGTACATCACCCGGT+TGG | 0.485866 | 3_2:+86735830 | Msa0434010:CDS |
| CCATCGGCAAGTTGAATCTC+AGG | 0.486110 | 3_2:+86735402 | Msa0434010:CDS |
| ATTGTGCTCAGAATTTGCTC+AGG | 0.486746 | 3_2:+86735911 | Msa0434010:CDS |
| CAAAATACCTACCTAGCATC+TGG | 0.489402 | 3_2:-86736301 | None:intergenic |
| TGCATAAAAGCTTTGGACTC+AGG | 0.491550 | 3_2:-86735970 | None:intergenic |
| GGGAAAGGAATGGACCCAAC+CGG | 0.491902 | 3_2:-86735845 | None:intergenic |
| AGTAACCTTGGTGAGGGTGT+TGG | 0.493425 | 3_2:-86736596 | None:intergenic |
| AACACAGGCGTGGTGAAGCT+CGG | 0.493828 | 3_2:+86735559 | Msa0434010:CDS |
| TCCATAAGGGAACTTAGCTC+TGG | 0.495616 | 3_2:-86736974 | None:intergenic |
| GGCGTGGTGAAGCTCGGCGA+TGG | 0.496361 | 3_2:+86735565 | Msa0434010:CDS |
| ATATGGATTGCATGGATGCT+GGG | 0.496428 | 3_2:+86737002 | Msa0434010:CDS |
| GGTGAAGCTCGGCGATGGGA+GGG | 0.506441 | 3_2:+86735570 | Msa0434010:CDS |
| ACCATCAACACCATGTTGCA+TGG | 0.507173 | 3_2:+86732729 | Msa0434010:CDS |
| GGACTTCCATATGGATTGCA+TGG | 0.509757 | 3_2:+86736994 | Msa0434010:CDS |
| GGCGGTTAGTAGCCGGCCAT+CGG | 0.511442 | 3_2:+86735386 | Msa0434010:CDS |
| TAAGGAATGGCCCAGGTATG+TGG | 0.512064 | 3_2:+86735290 | Msa0434010:CDS |
| AGGGTACTTGGTGGCGAGGA+TGG | 0.513266 | 3_2:+86735762 | Msa0434010:CDS |
| ATCCATATGGAAGTCCATAA+GGG | 0.514145 | 3_2:-86736987 | None:intergenic |
| TGGTCGGTTTAGAATACCAC+TGG | 0.515307 | 3_2:+86736426 | Msa0434010:CDS |
| GCGCTGTGCTCCACAAGCAT+AGG | 0.517620 | 3_2:-86736560 | None:intergenic |
| ACTTCAGGCATCTCTTTGAC+GGG | 0.518526 | 3_2:+86735329 | Msa0434010:CDS |
| AAAATTTCTTAGCCTACGTA+GGG | 0.521712 | 3_2:+86735491 | Msa0434010:CDS |
| AGATTCAACTTGCCGATGGC+CGG | 0.528502 | 3_2:-86735398 | None:intergenic |
| TACAGATATGCCTATGCTTG+TGG | 0.531718 | 3_2:+86736550 | Msa0434010:CDS |
| GAGCTTCACCACGCCTGTGT+TGG | 0.535944 | 3_2:-86735557 | None:intergenic |
| AGGGTGTTGGGGAAGTTACA+AGG | 0.536224 | 3_2:-86736583 | None:intergenic |
| AAACTCGCTATCCGTGACAA+TGG | 0.539476 | 3_2:-86735710 | None:intergenic |
| TAAGTGAGGAACCAGAGAAA+AGG | 0.541857 | 3_2:-86735525 | None:intergenic |
| TTCTGAGCACAATACCTCAA+TGG | 0.542740 | 3_2:-86735901 | None:intergenic |
| GAAGCTCGGCGATGGGAGGG+TGG | 0.544082 | 3_2:+86735573 | Msa0434010:CDS |
| CTTTGACGGGTACGCCACCT+TGG | 0.546670 | 3_2:+86735342 | Msa0434010:CDS |
| AGAGGAAGATGAAGATGGGA+GGG | 0.552579 | 3_2:+86736174 | Msa0434010:CDS |
| GAGTATAGTGATTCTTTGGG+AGG | 0.552797 | 3_2:+86735667 | Msa0434010:CDS |
| AGATCGATCTACAATCAGAA+AGG | 0.553319 | 3_2:+86736705 | Msa0434010:intron |
| GCGTGGTGAAGCTCGGCGAT+GGG | 0.553336 | 3_2:+86735566 | Msa0434010:CDS |
| GTAACGGTCAAGTGATCTTG+AGG | 0.554054 | 3_2:-86732635 | None:intergenic |
| AGGACATATTCCACTCTGGC+TGG | 0.554078 | 3_2:+86732796 | Msa0434010:CDS |
| ATCCCCGACCTTATAAAACC+AGG | 0.554782 | 3_2:+86735742 | Msa0434010:CDS |
| TGAGAGGAAGGTTATTGGAC+GGG | 0.555588 | 3_2:+86735798 | Msa0434010:CDS |
| GGCCCAGGTATGTGGAACAT+AGG | 0.555855 | 3_2:+86735298 | Msa0434010:CDS |
| TGGGAGGGTGGTTTGTCTGA+CGG | 0.556766 | 3_2:+86735585 | Msa0434010:CDS |
| GAGGACGGGCGGTTAGTAGC+CGG | 0.562327 | 3_2:+86735379 | Msa0434010:CDS |
| GATCGATCTACAATCAGAAA+GGG | 0.563093 | 3_2:+86736706 | Msa0434010:intron |
| GCATTAGACCCAAATGAACA+TGG | 0.563212 | 3_2:+86736478 | Msa0434010:CDS |
| TTCAAGGACATATTCCACTC+TGG | 0.567527 | 3_2:+86732792 | Msa0434010:CDS |
| TTTCATAAATGCATATGAAG+AGG | 0.569019 | 3_2:+86736156 | Msa0434010:CDS |
| GTTCAGTAACGGGAAAGGAA+TGG | 0.569137 | 3_2:-86735855 | None:intergenic |
| AACTGGCTCTAATGAGAGGA+AGG | 0.569553 | 3_2:+86735786 | Msa0434010:CDS |
| ACCGCCCGTCCTCGAAGTGA+AGG | 0.571723 | 3_2:-86735369 | None:intergenic |
| ATTGAAATAATAGGGTTGGT+CGG | 0.571946 | 3_2:+86736410 | Msa0434010:intron |
| TCTGGCAATCTCTTCAAAAG+TGG | 0.572064 | 3_2:-86736956 | None:intergenic |
| ATCCTCGCCACCAAGTACCC+TGG | 0.572517 | 3_2:-86735760 | None:intergenic |
| ATTGGACGGGTCGATTGTAG+GGG | 0.575382 | 3_2:+86735811 | Msa0434010:CDS |
| TAACCTTGGTGAGGGTGTTG+GGG | 0.575449 | 3_2:-86736594 | None:intergenic |
| GATTGCTCCACCTCCACCAC+CGG | 0.575723 | 3_2:+86732682 | Msa0434010:CDS |
| AAGAGGAAGATGAAGATGGG+AGG | 0.578297 | 3_2:+86736173 | Msa0434010:CDS |
| TTGTGCTCAGAATTTGCTCA+GGG | 0.579588 | 3_2:+86735912 | Msa0434010:CDS |
| GCATAAACCCTAATTATCTA+GGG | 0.582367 | 3_2:+86736521 | Msa0434010:CDS |
| AGTATATGCGAACAACCACT+AGG | 0.584432 | 3_2:-86737297 | None:intergenic |
| AAGATGTTCTACCAGATGCT+AGG | 0.584562 | 3_2:+86736290 | Msa0434010:CDS |
| AAGAAAAGTAACCTTGGTGA+GGG | 0.584819 | 3_2:-86736602 | None:intergenic |
| GCTAAGAACTGGTATGAAGA+AGG | 0.585069 | 3_2:+86736728 | Msa0434010:CDS |
| CGATTATATGGATTCCCTAG+TGG | 0.585472 | 3_2:+86737282 | Msa0434010:three_prime_UTR |
| GAAAATTTCTTAGCCTACGT+AGG | 0.586815 | 3_2:+86735490 | Msa0434010:CDS |
| CCCCTATGTTCCACATACCT+GGG | 0.587485 | 3_2:-86735300 | None:intergenic |
| ATCTCTCAAGAGAAATGGGA+AGG | 0.587980 | 3_2:+86732758 | Msa0434010:CDS |
| CTCCATTGTACAAATTTCAG+TGG | 0.589016 | 3_2:+86735944 | Msa0434010:CDS |
| AGTGATAGACCCCGACACAT+TGG | 0.593877 | 3_2:+86735627 | Msa0434010:CDS |
| AAAGGAACGTACATAAGGAA+TGG | 0.595708 | 3_2:+86735277 | Msa0434010:CDS |
| TATAAAACCAGGGTACTTGG+TGG | 0.596183 | 3_2:+86735753 | Msa0434010:CDS |
| CTCGAAGTGAAGGCCGACCA+AGG | 0.599301 | 3_2:-86735359 | None:intergenic |
| CTCTGCACATCCCATTGTCA+CGG | 0.602091 | 3_2:+86735699 | Msa0434010:CDS |
| GGAAAGGAATGGACCCAACC+GGG | 0.602396 | 3_2:-86735844 | None:intergenic |
| AACCAGGGTACTTGGTGGCG+AGG | 0.602728 | 3_2:+86735758 | Msa0434010:CDS |
| ATAGTGTTCAGTAACGGGAA+AGG | 0.603605 | 3_2:-86735860 | None:intergenic |
| GCCTTCACTTCGAGGACGGG+CGG | 0.605814 | 3_2:+86735368 | Msa0434010:CDS |
| TGTAGGGGCGGTACATCACC+CGG | 0.606513 | 3_2:+86735826 | Msa0434010:CDS |
| CGGTTTAGAATACCACTGGA+TGG | 0.607749 | 3_2:+86736430 | Msa0434010:CDS |
| CTTTGCCATTAAATGAGCGA+AGG | 0.609125 | 3_2:-86736270 | None:intergenic |
| AATAACATAGTGTTCAGTAA+CGG | 0.609373 | 3_2:-86735866 | None:intergenic |
| CATGTTATGTGCAAGACTAG+TGG | 0.609567 | 3_2:+86735991 | Msa0434010:CDS |
| AAAGAAAAGTAACCTTGGTG+AGG | 0.610236 | 3_2:-86736603 | None:intergenic |
| GACCCAAATGAACATGGGAA+AGG | 0.610952 | 3_2:+86736484 | Msa0434010:CDS |
| TTGTGCCTGAAATGCCATTG+AGG | 0.611330 | 3_2:+86735887 | Msa0434010:CDS |
| AAATGAACATGGGAAAGGCA+TGG | 0.612023 | 3_2:+86736489 | Msa0434010:CDS |
| GTTTCGTATTATAGATGGTG+AGG | 0.614377 | 3_2:-86732510 | None:intergenic |
| GGAGCAACAGAGGAAGATGA+TGG | 0.616543 | 3_2:+86736788 | Msa0434010:CDS |
| ATGAGAGGAAGGTTATTGGA+CGG | 0.618133 | 3_2:+86735797 | Msa0434010:CDS |
| TGCCACTGAAATTTGTACAA+TGG | 0.622547 | 3_2:-86735946 | None:intergenic |
| GAGGGTGACTGCTGTTATTG+CGG | 0.628329 | 3_2:+86736192 | Msa0434010:CDS |
| AACATGGTGTTGATGGTCGC+CGG | 0.628701 | 3_2:-86732723 | None:intergenic |
| ACGTACATAAGGAATGGCCC+AGG | 0.629963 | 3_2:+86735283 | Msa0434010:CDS |
| ATCCCACTCACCAGCCAGAG+TGG | 0.630575 | 3_2:-86732806 | None:intergenic |
| GCCTCGACCAGGAGCAACAG+AGG | 0.630798 | 3_2:+86736778 | Msa0434010:CDS |
| TGGAAACTGGCTCTAATGAG+AGG | 0.631356 | 3_2:+86735782 | Msa0434010:CDS |
| CAATTGTCTCCAATGTGTCG+GGG | 0.633425 | 3_2:-86735636 | None:intergenic |
| TCCCCGACCTTATAAAACCA+GGG | 0.638042 | 3_2:+86735743 | Msa0434010:CDS |
| CCATATGGACTTCCATCCAG+TGG | 0.639234 | 3_2:-86736442 | None:intergenic |
| AAATGGAAAGTAACGAACAA+AGG | 0.641051 | 3_2:-86736136 | None:intergenic |
| AAGCTGATAGCAATCCATAA+CGG | 0.641754 | 3_2:+86737177 | Msa0434010:three_prime_UTR |
| AGATACTAGTCCATGCAACA+TGG | 0.643055 | 3_2:-86732739 | None:intergenic |
| CCTGAGATTCAACTTGCCGA+TGG | 0.643276 | 3_2:-86735402 | None:intergenic |
| GAGAAAAGTTTAGAGACCAC+CGG | 0.644252 | 3_2:+86732704 | Msa0434010:CDS |
| GGTGGAGCAATCACACGCGA+TGG | 0.648183 | 3_2:-86732671 | None:intergenic |
| CGACAATGCCAACACAGGCG+TGG | 0.649077 | 3_2:+86735549 | Msa0434010:CDS |
| TGGACTCACAACATTTGTAA+CGG | 0.649095 | 3_2:-86732651 | None:intergenic |
| TGGTGAGGCTGTGAAAGCCA+TGG | 0.651294 | 3_2:-86732495 | None:intergenic |
| CATTAGACCCAAATGAACAT+GGG | 0.657991 | 3_2:+86736479 | Msa0434010:CDS |
| GTTGGCATTGTCGGTAAGTG+AGG | 0.658851 | 3_2:-86735539 | None:intergenic |
| GGGTGTTGGGGAAGTTACAA+GGG | 0.668827 | 3_2:-86736582 | None:intergenic |
| GTATATGCGAACAACCACTA+GGG | 0.671011 | 3_2:-86737296 | None:intergenic |
| GCTTGCTAGCTCCCCTACGT+AGG | 0.674811 | 3_2:-86735503 | None:intergenic |
| CTTACCGACAATGCCAACAC+AGG | 0.676631 | 3_2:+86735544 | Msa0434010:CDS |
| CCCAGGTATGTGGAACATAG+GGG | 0.677812 | 3_2:+86735300 | Msa0434010:CDS |
| CTTCCCCAACACCCTCACCA+AGG | 0.691072 | 3_2:+86736591 | Msa0434010:CDS |
| ATGGTGTTGATGGTCGCCGG+TGG | 0.692693 | 3_2:-86732720 | None:intergenic |
| GGACGGGTCGATTGTAGGGG+CGG | 0.705064 | 3_2:+86735814 | Msa0434010:CDS |
| GAAGTGAAGGCCGACCAAGG+TGG | 0.710579 | 3_2:-86735356 | None:intergenic |
| AAATTTCTTAGCCTACGTAG+GGG | 0.750129 | 3_2:+86735492 | Msa0434010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATTTTTAATAATATA+TGG | - | chr3_2:86733305-86733324 | None:intergenic | 0.0% |
| !! | TAATAATAAATAAAGATACA+TGG | + | chr3_2:86733111-86733130 | Msa0434010:intron | 10.0% |
| !!! | ATATTTTTAATAATATATGG+AGG | - | chr3_2:86733302-86733321 | None:intergenic | 10.0% |
| !!! | AATAATCAATTATACTTTTA+AGG | + | chr3_2:86733432-86733451 | Msa0434010:intron | 10.0% |
| !!! | ATAATCAATTATACTTTTAA+GGG | + | chr3_2:86733433-86733452 | Msa0434010:intron | 10.0% |
| !! | GTAAAATTGAAAAAAAAAAT+AGG | + | chr3_2:86734870-86734889 | Msa0434010:intron | 10.0% |
| !! | TGATACTATAAATCTTTAAA+TGG | - | chr3_2:86733033-86733052 | None:intergenic | 15.0% |
| !!! | TAGTATGTTTTAAATTTTGT+TGG | - | chr3_2:86733236-86733255 | None:intergenic | 15.0% |
| !!! | AAAATTTAAAACATACTAAG+CGG | + | chr3_2:86733238-86733257 | Msa0434010:intron | 15.0% |
| !!! | AAATGTTTTTAGTTTTTTAG+GGG | - | chr3_2:86733746-86733765 | None:intergenic | 15.0% |
| !!! | CAAATGTTTTTAGTTTTTTA+GGG | - | chr3_2:86733747-86733766 | None:intergenic | 15.0% |
| !!! | TCAAATGTTTTTAGTTTTTT+AGG | - | chr3_2:86733748-86733767 | None:intergenic | 15.0% |
| !! | AGGAGATTATAATTAAATTT+AGG | + | chr3_2:86734601-86734620 | Msa0434010:intron | 15.0% |
| !! | AAAATACTAATAATTCATTC+TGG | + | chr3_2:86734826-86734845 | Msa0434010:intron | 15.0% |
| !!! | ACATCTTAATTATTTTACAT+TGG | + | chr3_2:86736324-86736343 | Msa0434010:intron | 15.0% |
| !! | TCATTGTTTATTGAAATAAT+AGG | + | chr3_2:86736401-86736420 | Msa0434010:intron | 15.0% |
| !! | CATTGTTTATTGAAATAATA+GGG | + | chr3_2:86736402-86736421 | Msa0434010:intron | 15.0% |
| !! | CGGCAATAAAAATATAAAAT+TGG | - | chr3_2:86732879-86732898 | None:intergenic | 20.0% |
| !! | AACTATACGTTAAAAAGAAA+AGG | + | chr3_2:86732928-86732947 | Msa0434010:intron | 20.0% |
| !! | TAACATTTCTTAAAAGAAAG+AGG | + | chr3_2:86732977-86732996 | Msa0434010:intron | 20.0% |
| !! | GATTTCCAGAAAATTAAATT+TGG | + | chr3_2:86733583-86733602 | Msa0434010:intron | 20.0% |
| !!! | ACTTGTTTAAGACTATAAAT+AGG | - | chr3_2:86733828-86733847 | None:intergenic | 20.0% |
| !! | ATTTATAGTAAGAACTTACA+TGG | + | chr3_2:86735117-86735136 | Msa0434010:intron | 20.0% |
| !!! | TATTAACTTGTGACATAAAA+AGG | + | chr3_2:86735194-86735213 | Msa0434010:intron | 20.0% |
| !! | ATGTAAAATTAGCGATTATA+TGG | + | chr3_2:86737270-86737289 | Msa0434010:three_prime_UTR | 20.0% |
| !!! | ACCATATTTTGCTTTGAAAT+GGG | - | chr3_2:86732536-86732555 | None:intergenic | 25.0% |
| !!! | AACCATATTTTGCTTTGAAA+TGG | - | chr3_2:86732537-86732556 | None:intergenic | 25.0% |
| !! | AAGTTTTCATTTCGAAACAA+GGG | + | chr3_2:86732590-86732609 | Msa0434010:CDS | 25.0% |
| ! | GATAAAAACTATGAGTGTTA+GGG | - | chr3_2:86732848-86732867 | None:intergenic | 25.0% |
| ! | TGATAAAAACTATGAGTGTT+AGG | - | chr3_2:86732849-86732868 | None:intergenic | 25.0% |
| ! | TAAATCTTTAAATGGAGTAG+TGG | - | chr3_2:86733025-86733044 | None:intergenic | 25.0% |
| !!! | TTATACTTTTAAGGGATCTA+CGG | + | chr3_2:86733441-86733460 | Msa0434010:intron | 25.0% |
| ! | AAATATCATGTACGAATCAA+TGG | - | chr3_2:86733471-86733490 | None:intergenic | 25.0% |
| !!! | GGTATTTTTGGAAATTTTAC+AGG | - | chr3_2:86733525-86733544 | None:intergenic | 25.0% |
| ! | TGAAGAAAATTGAAGAAAAG+AGG | + | chr3_2:86733765-86733784 | Msa0434010:intron | 25.0% |
| ! | ATAAATTCAGTCAAAAAACG+TGG | - | chr3_2:86734155-86734174 | None:intergenic | 25.0% |
| !!! | TAGTATTTTTCAGATGATTC+CGG | - | chr3_2:86734815-86734834 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCAATTTTACCCC+TGG | - | chr3_2:86734867-86734886 | None:intergenic | 25.0% |
| ! | CCAAATTCAAAAAAACTAGT+GGG | - | chr3_2:86735018-86735037 | None:intergenic | 25.0% |
| ! | ACCAAATTCAAAAAAACTAG+TGG | - | chr3_2:86735019-86735038 | None:intergenic | 25.0% |
| ! | CCAAATTCAAAAAAACTAGT+GGG | - | chr3_2:86735018-86735037 | None:intergenic | 25.0% |
| ! | ACCAAATTCAAAAAAACTAG+TGG | - | chr3_2:86735019-86735038 | None:intergenic | 25.0% |
| !! | AATTATTTCTCCTCAAGAAA+AGG | - | chr3_2:86735172-86735191 | None:intergenic | 25.0% |
| ! | TGACATAAAAAGGTTATTGT+TGG | + | chr3_2:86735204-86735223 | Msa0434010:intron | 25.0% |
| ! | AATTGATAAATGCAAACCTA+AGG | + | chr3_2:86735230-86735249 | Msa0434010:intron | 25.0% |
| ! | AAAATTATCAACTCTTCCTT+AGG | - | chr3_2:86735249-86735268 | None:intergenic | 25.0% |
| !! | TGATAATTTTACATGCAGAA+AGG | + | chr3_2:86735259-86735278 | Msa0434010:intron | 25.0% |
| ! | ATTTGAGTATAGTGATTCTT+TGG | + | chr3_2:86735663-86735682 | Msa0434010:CDS | 25.0% |
| ! | TTTGAGTATAGTGATTCTTT+GGG | + | chr3_2:86735664-86735683 | Msa0434010:CDS | 25.0% |
| ! | AATAACATAGTGTTCAGTAA+CGG | - | chr3_2:86735869-86735888 | None:intergenic | 25.0% |
| !!! | ATTTTGGTATGTGATTTTGA+AGG | + | chr3_2:86736096-86736115 | Msa0434010:intron | 25.0% |
| ! | CTTCATATGCATTTATGAAA+TGG | - | chr3_2:86736156-86736175 | None:intergenic | 25.0% |
| ! | TTTCATAAATGCATATGAAG+AGG | + | chr3_2:86736156-86736175 | Msa0434010:CDS | 25.0% |
| ! | GTTTATTGAAATAATAGGGT+TGG | + | chr3_2:86736406-86736425 | Msa0434010:intron | 25.0% |
| ! | AAAAAAAGTTAGAACAAGGA+GGG | - | chr3_2:86736857-86736876 | None:intergenic | 25.0% |
| ! | AAAAAAAAGTTAGAACAAGG+AGG | - | chr3_2:86736858-86736877 | None:intergenic | 25.0% |
| ! | GGTAAAAAAAAGTTAGAACA+AGG | - | chr3_2:86736861-86736880 | None:intergenic | 25.0% |
| !!! | CCATATTTTGCTTTGAAATG+GGG | - | chr3_2:86732535-86732554 | None:intergenic | 30.0% |
| ! | CAAGTTTTCATTTCGAAACA+AGG | + | chr3_2:86732589-86732608 | Msa0434010:CDS | 30.0% |
| TAGTATCTCTCAAGAGAAAT+GGG | + | chr3_2:86732754-86732773 | Msa0434010:CDS | 30.0% | |
| AAGTAGAACTCGACTAATAA+TGG | - | chr3_2:86733198-86733217 | None:intergenic | 30.0% | |
| TTAAAACATACTAAGCGGAA+AGG | + | chr3_2:86733243-86733262 | Msa0434010:intron | 30.0% | |
| !! | TATACTTTTAAGGGATCTAC+GGG | + | chr3_2:86733442-86733461 | Msa0434010:intron | 30.0% |
| AAATCACTAACAATATGGTC+CGG | - | chr3_2:86733568-86733587 | None:intergenic | 30.0% | |
| TCTGGAAATCACTAACAATA+TGG | - | chr3_2:86733573-86733592 | None:intergenic | 30.0% | |
| !! | CTGGTCCAAATTTAATTTTC+TGG | - | chr3_2:86733591-86733610 | None:intergenic | 30.0% |
| AATAACATTTCAGCTTGTGT+GGG | - | chr3_2:86733677-86733696 | None:intergenic | 30.0% | |
| !!! | TTTTAGTTTTTTAGGGGTGT+CGG | - | chr3_2:86733740-86733759 | None:intergenic | 30.0% |
| !! | ATGGAGGTATTTATTGAAGA+TGG | + | chr3_2:86733799-86733818 | Msa0434010:intron | 30.0% |
| TGAAAGAGAGTCATTAATGT+GGG | - | chr3_2:86733905-86733924 | None:intergenic | 30.0% | |
| TTGAAAGAGAGTCATTAATG+TGG | - | chr3_2:86733906-86733925 | None:intergenic | 30.0% | |
| AATCCAATGCTGAATATTTC+CGG | + | chr3_2:86733929-86733948 | Msa0434010:intron | 30.0% | |
| ! | TATTTCCGGATTTTACATTC+CGG | + | chr3_2:86733943-86733962 | Msa0434010:intron | 30.0% |
| TCATCATTATCGCATTAATC+CGG | + | chr3_2:86734007-86734026 | Msa0434010:intron | 30.0% | |
| ! | TTAATCCGGAAAGTATAGTT+CGG | + | chr3_2:86734021-86734040 | Msa0434010:intron | 30.0% |
| ATCATGTCGTTAGCTATAAA+CGG | + | chr3_2:86734955-86734974 | Msa0434010:intron | 30.0% | |
| !!! | CCCACTAGTTTTTTTGAATT+TGG | + | chr3_2:86735015-86735034 | Msa0434010:intron | 30.0% |
| !!! | CCCACTAGTTTTTTTGAATT+TGG | + | chr3_2:86735015-86735034 | Msa0434010:intron | 30.0% |
| ! | CTAATAACTTCCTTTTCTTG+AGG | + | chr3_2:86735159-86735178 | Msa0434010:intron | 30.0% |
| ! | CTAAGAAATTTTCAGCCTTA+GGG | - | chr3_2:86735483-86735502 | None:intergenic | 30.0% |
| AAAATTTCTTAGCCTACGTA+GGG | + | chr3_2:86735491-86735510 | Msa0434010:CDS | 30.0% | |
| ATAACATAGTGTTCAGTAAC+GGG | - | chr3_2:86735868-86735887 | None:intergenic | 30.0% | |
| TGAAATTTGTACAATGGAGT+TGG | - | chr3_2:86735943-86735962 | None:intergenic | 30.0% | |
| CATAACATGCATAAAAGCTT+TGG | - | chr3_2:86735980-86735999 | None:intergenic | 30.0% | |
| AAATGGAAAGTAACGAACAA+AGG | - | chr3_2:86736139-86736158 | None:intergenic | 30.0% | |
| GTATTCAATTATGACCTTAC+AGG | - | chr3_2:86736355-86736374 | None:intergenic | 30.0% | |
| ! | ATTGAAATAATAGGGTTGGT+CGG | + | chr3_2:86736410-86736429 | Msa0434010:intron | 30.0% |
| AGCATAAACCCTAATTATCT+AGG | + | chr3_2:86736520-86736539 | Msa0434010:CDS | 30.0% | |
| GCATAAACCCTAATTATCTA+GGG | + | chr3_2:86736521-86736540 | Msa0434010:CDS | 30.0% | |
| ACTTCAACCCTAGATAATTA+GGG | - | chr3_2:86736531-86736550 | None:intergenic | 30.0% | |
| TACTTCAACCCTAGATAATT+AGG | - | chr3_2:86736532-86736551 | None:intergenic | 30.0% | |
| CATACAAAGAAAAGTAACCT+TGG | - | chr3_2:86736611-86736630 | None:intergenic | 30.0% | |
| TCAACTAAATGTATGTTGGT+GGG | - | chr3_2:86736663-86736682 | None:intergenic | 30.0% | |
| TTCAACTAAATGTATGTTGG+TGG | - | chr3_2:86736664-86736683 | None:intergenic | 30.0% | |
| ACGTTCAACTAAATGTATGT+TGG | - | chr3_2:86736667-86736686 | None:intergenic | 30.0% | |
| AAAAAAGTTAGAACAAGGAG+GGG | - | chr3_2:86736856-86736875 | None:intergenic | 30.0% | |
| !!! | TTTTTTTACCCTCATATGAC+AGG | + | chr3_2:86736871-86736890 | Msa0434010:intron | 30.0% |
| ! | TAGTCACACTTTTACTGTTT+TGG | - | chr3_2:86737030-86737049 | None:intergenic | 30.0% |
| GTTTCGTATTATAGATGGTG+AGG | - | chr3_2:86732513-86732532 | None:intergenic | 35.0% | |
| ATGGGGTTTCGTATTATAGA+TGG | - | chr3_2:86732518-86732537 | None:intergenic | 35.0% | |
| CCCCATTTCAAAGCAAAATA+TGG | + | chr3_2:86732532-86732551 | Msa0434010:CDS | 35.0% | |
| ! | ACATGCTTGATAACACTTGT+AGG | + | chr3_2:86732564-86732583 | Msa0434010:CDS | 35.0% |
| TGGACTCACAACATTTGTAA+CGG | - | chr3_2:86732654-86732673 | None:intergenic | 35.0% | |
| CTAGTATCTCTCAAGAGAAA+TGG | + | chr3_2:86732753-86732772 | Msa0434010:CDS | 35.0% | |
| GTAACATTCACTTCAAGTAG+AGG | - | chr3_2:86733173-86733192 | None:intergenic | 35.0% | |
| TAGAACTCGACTAATAATGG+TGG | - | chr3_2:86733195-86733214 | None:intergenic | 35.0% | |
| GACAAACCAATATTACGTGT+AGG | - | chr3_2:86733340-86733359 | None:intergenic | 35.0% | |
| ! | GATTATATAATCCGGACTAG+GGG | - | chr3_2:86733546-86733565 | None:intergenic | 35.0% |
| GGATTATATAATCCGGACTA+GGG | - | chr3_2:86733547-86733566 | None:intergenic | 35.0% | |
| CTAGTCCGGATTATATAATC+CGG | + | chr3_2:86733546-86733565 | Msa0434010:intron | 35.0% | |
| ATGGTCCGGATTATATAATC+CGG | - | chr3_2:86733554-86733573 | None:intergenic | 35.0% | |
| ACAAAAAAGCGAACAACATC+TGG | - | chr3_2:86733610-86733629 | None:intergenic | 35.0% | |
| TGTGTCTTTCTTTGATGTCA+TGG | + | chr3_2:86733627-86733646 | Msa0434010:intron | 35.0% | |
| GTGTCTTTCTTTGATGTCAT+GGG | + | chr3_2:86733628-86733647 | Msa0434010:intron | 35.0% | |
| ATAACATTTCAGCTTGTGTG+GGG | - | chr3_2:86733676-86733695 | None:intergenic | 35.0% | |
| CAATAACATTTCAGCTTGTG+TGG | - | chr3_2:86733678-86733697 | None:intergenic | 35.0% | |
| ACAAGCTGAAATGTTATTGC+AGG | + | chr3_2:86733679-86733698 | Msa0434010:intron | 35.0% | |
| CAAGCTGAAATGTTATTGCA+GGG | + | chr3_2:86733680-86733699 | Msa0434010:intron | 35.0% | |
| TATTGCAGGGTTCATATGAA+TGG | + | chr3_2:86733693-86733712 | Msa0434010:intron | 35.0% | |
| AAAAGAGGTGAAGTGAAGAA+TGG | + | chr3_2:86733780-86733799 | Msa0434010:intron | 35.0% | |
| AGTCAATGAAAACGTGTTAG+TGG | + | chr3_2:86733864-86733883 | Msa0434010:intron | 35.0% | |
| AATCCGGAAATATTCAGCAT+TGG | - | chr3_2:86733935-86733954 | None:intergenic | 35.0% | |
| ACATTCCGGAATGTAAAATC+CGG | - | chr3_2:86733951-86733970 | None:intergenic | 35.0% | |
| AAAAGTTGACACTTCCTGTA+GGG | - | chr3_2:86733980-86733999 | None:intergenic | 35.0% | |
| AATGCGATAATGATGAACGA+GGG | - | chr3_2:86734003-86734022 | None:intergenic | 35.0% | |
| TAATGCGATAATGATGAACG+AGG | - | chr3_2:86734004-86734023 | None:intergenic | 35.0% | |
| AAGTATAGTTCGGAAACCAA+AGG | + | chr3_2:86734031-86734050 | Msa0434010:intron | 35.0% | |
| !! | GCATTCTGGAATATACAATC+CGG | - | chr3_2:86734063-86734082 | None:intergenic | 35.0% |
| GGTTTGGAAGGCTATTTATA+GGG | - | chr3_2:86734207-86734226 | None:intergenic | 35.0% | |
| TTGTAGAAGAAAGAAGAGGA+GGG | - | chr3_2:86734263-86734282 | None:intergenic | 35.0% | |
| ATGGTTGTAGAAGAAAGAAG+AGG | - | chr3_2:86734267-86734286 | None:intergenic | 35.0% | |
| TATCTATAAAAGGCCAACGA+TGG | - | chr3_2:86734296-86734315 | None:intergenic | 35.0% | |
| !!! | TCGTTGGCCTTTTATAGATA+AGG | + | chr3_2:86734296-86734315 | Msa0434010:intron | 35.0% |
| !!! | CGTTGGCCTTTTATAGATAA+GGG | + | chr3_2:86734297-86734316 | Msa0434010:intron | 35.0% |
| ATGAGGCCCTTATCTATAAA+AGG | - | chr3_2:86734306-86734325 | None:intergenic | 35.0% | |
| ! | AACCCTGAAAGTTTTCAATG+AGG | - | chr3_2:86734323-86734342 | None:intergenic | 35.0% |
| ACTTTCAGGGTTTGTATGAA+CGG | + | chr3_2:86734331-86734350 | Msa0434010:intron | 35.0% | |
| GCTCTTAGGAGATTAGAATT+AGG | + | chr3_2:86734573-86734592 | Msa0434010:intron | 35.0% | |
| GAGATTAGAATTAGGCTCTT+AGG | + | chr3_2:86734581-86734600 | Msa0434010:intron | 35.0% | |
| GTTCTGCTAAAATACTGTTC+CGG | + | chr3_2:86734779-86734798 | Msa0434010:intron | 35.0% | |
| TTCTGCTAAAATACTGTTCC+GGG | + | chr3_2:86734780-86734799 | Msa0434010:intron | 35.0% | |
| !!! | TGATTCCGGATTTTAAAACC+CGG | - | chr3_2:86734801-86734820 | None:intergenic | 35.0% |
| !! | TCATTCTGGAATACGAAATC+CGG | + | chr3_2:86734840-86734859 | Msa0434010:intron | 35.0% |
| AAAAAAAAATAGGACGCGCA+AGG | + | chr3_2:86734880-86734899 | Msa0434010:intron | 35.0% | |
| GGTGGAAAAAGTAATACTCT+TGG | + | chr3_2:86734913-86734932 | Msa0434010:intron | 35.0% | |
| GTTTATAGCTAACGACATGA+TGG | - | chr3_2:86734956-86734975 | None:intergenic | 35.0% | |
| AAAGGAACGTACATAAGGAA+TGG | + | chr3_2:86735277-86735296 | Msa0434010:CDS | 35.0% | |
| ! | GCTAAGAAATTTTCAGCCTT+AGG | - | chr3_2:86735484-86735503 | None:intergenic | 35.0% |
| GAAAATTTCTTAGCCTACGT+AGG | + | chr3_2:86735490-86735509 | Msa0434010:CDS | 35.0% | |
| AAATTTCTTAGCCTACGTAG+GGG | + | chr3_2:86735492-86735511 | Msa0434010:CDS | 35.0% | |
| TCTAATGAGAGGAAGGTTAT+TGG | + | chr3_2:86735793-86735812 | Msa0434010:CDS | 35.0% | |
| CTCCATTGTACAAATTTCAG+TGG | + | chr3_2:86735944-86735963 | Msa0434010:CDS | 35.0% | |
| TGCCACTGAAATTTGTACAA+TGG | - | chr3_2:86735949-86735968 | None:intergenic | 35.0% | |
| !! | TTGGTATGTGATTTTGAAGG+TGG | + | chr3_2:86736099-86736118 | Msa0434010:intron | 35.0% |
| TATGAAGAGGAAGATGAAGA+TGG | + | chr3_2:86736169-86736188 | Msa0434010:CDS | 35.0% | |
| ATGAAGAGGAAGATGAAGAT+GGG | + | chr3_2:86736170-86736189 | Msa0434010:CDS | 35.0% | |
| CAATTATGACCTTACAGGAA+GGG | - | chr3_2:86736350-86736369 | None:intergenic | 35.0% | |
| TCAATTATGACCTTACAGGA+AGG | - | chr3_2:86736351-86736370 | None:intergenic | 35.0% | |
| CATTAGACCCAAATGAACAT+GGG | + | chr3_2:86736479-86736498 | Msa0434010:CDS | 35.0% | |
| AAGAAAAGTAACCTTGGTGA+GGG | - | chr3_2:86736605-86736624 | None:intergenic | 35.0% | |
| AAAGAAAAGTAACCTTGGTG+AGG | - | chr3_2:86736606-86736625 | None:intergenic | 35.0% | |
| AGATCGATCTACAATCAGAA+AGG | + | chr3_2:86736705-86736724 | Msa0434010:intron | 35.0% | |
| GATCGATCTACAATCAGAAA+GGG | + | chr3_2:86736706-86736725 | Msa0434010:intron | 35.0% | |
| TCCATCATCAGTGAGAAAAA+TGG | + | chr3_2:86736904-86736923 | Msa0434010:CDS | 35.0% | |
| !! | TCCATTTTTCTCACTGATGA+TGG | - | chr3_2:86736908-86736927 | None:intergenic | 35.0% |
| ATCAGTGAGAAAAATGGAGA+AGG | + | chr3_2:86736910-86736929 | Msa0434010:CDS | 35.0% | |
| AAATGGAGAAGGATATGCTT+TGG | + | chr3_2:86736921-86736940 | Msa0434010:CDS | 35.0% | |
| !!! | GGATATGCTTTGGTTTTAGA+TGG | + | chr3_2:86736931-86736950 | Msa0434010:CDS | 35.0% |
| ATCCATATGGAAGTCCATAA+GGG | - | chr3_2:86736990-86737009 | None:intergenic | 35.0% | |
| AATCCATATGGAAGTCCATA+AGG | - | chr3_2:86736991-86737010 | None:intergenic | 35.0% | |
| GACTGTTGTCATTATCGTAT+TGG | + | chr3_2:86737052-86737071 | Msa0434010:three_prime_UTR | 35.0% | |
| AAGCTGATAGCAATCCATAA+CGG | + | chr3_2:86737177-86737196 | Msa0434010:three_prime_UTR | 35.0% | |
| TCATACATGTACTTCCGTTA+TGG | - | chr3_2:86737194-86737213 | None:intergenic | 35.0% | |
| !! | CGAAACAAGGGCATCTATAA+AGG | + | chr3_2:86732602-86732621 | Msa0434010:CDS | 40.0% |
| ! | GTGGTCTCTAAACTTTTCTC+CGG | - | chr3_2:86732704-86732723 | None:intergenic | 40.0% |
| GAGAAAAGTTTAGAGACCAC+CGG | + | chr3_2:86732704-86732723 | Msa0434010:CDS | 40.0% | |
| AGATACTAGTCCATGCAACA+TGG | - | chr3_2:86732742-86732761 | None:intergenic | 40.0% | |
| ATCTCTCAAGAGAAATGGGA+AGG | + | chr3_2:86732758-86732777 | Msa0434010:CDS | 40.0% | |
| TTCAAGGACATATTCCACTC+TGG | + | chr3_2:86732792-86732811 | Msa0434010:CDS | 40.0% | |
| GCTGATCCTACACGTAATAT+TGG | + | chr3_2:86733331-86733350 | Msa0434010:intron | 40.0% | |
| ATTCCCGTAATATACCTGGT+GGG | - | chr3_2:86733387-86733406 | None:intergenic | 40.0% | |
| CTTGATTCCCGTAATATACC+TGG | - | chr3_2:86733391-86733410 | None:intergenic | 40.0% | |
| ! | ATTTTACAGGACGTGCAAGA+AGG | - | chr3_2:86733512-86733531 | None:intergenic | 40.0% |
| TTCCAAAAATACCCCTAGTC+CGG | + | chr3_2:86733532-86733551 | Msa0434010:intron | 40.0% | |
| CGGATTATATAATCCGGACT+AGG | - | chr3_2:86733548-86733567 | None:intergenic | 40.0% | |
| CTTGTGTGGGGTTCATATAA+CGG | - | chr3_2:86733664-86733683 | None:intergenic | 40.0% | |
| GTCATTAATGTGGGTTTGGA+CGG | - | chr3_2:86733896-86733915 | None:intergenic | 40.0% | |
| GAGAGTCATTAATGTGGGTT+TGG | - | chr3_2:86733900-86733919 | None:intergenic | 40.0% | |
| GAAAAGTTGACACTTCCTGT+AGG | - | chr3_2:86733981-86734000 | None:intergenic | 40.0% | |
| GGTTTCCGAACTATACTTTC+CGG | - | chr3_2:86734029-86734048 | None:intergenic | 40.0% | |
| TACAATCCGGAATACACCTT+TGG | - | chr3_2:86734050-86734069 | None:intergenic | 40.0% | |
| TGGAAGGCTATTTATAGGGA+GGG | - | chr3_2:86734203-86734222 | None:intergenic | 40.0% | |
| TTGGAAGGCTATTTATAGGG+AGG | - | chr3_2:86734204-86734223 | None:intergenic | 40.0% | |
| GGGTTTGGAAGGCTATTTAT+AGG | - | chr3_2:86734208-86734227 | None:intergenic | 40.0% | |
| TGTAGAAGAAAGAAGAGGAG+GGG | - | chr3_2:86734262-86734281 | None:intergenic | 40.0% | |
| GTTGTAGAAGAAAGAAGAGG+AGG | - | chr3_2:86734264-86734283 | None:intergenic | 40.0% | |
| ! | CAACCATGATTTTCCATCGT+TGG | + | chr3_2:86734280-86734299 | Msa0434010:intron | 40.0% |
| GGCCTCATTGAAAACTTTCA+GGG | + | chr3_2:86734318-86734337 | Msa0434010:intron | 40.0% | |
| GTTTGTATGAACGGTCAATG+AGG | + | chr3_2:86734340-86734359 | Msa0434010:intron | 40.0% | |
| CATAGCAGTAGTTTGGCTAT+TGG | - | chr3_2:86734530-86734549 | None:intergenic | 40.0% | |
| GATAGGACATAGCAGTAGTT+TGG | - | chr3_2:86734537-86734556 | None:intergenic | 40.0% | |
| TATGTCCTATCACATACCAG+TGG | + | chr3_2:86734546-86734565 | Msa0434010:intron | 40.0% | |
| !!! | CTGTTCCGGGTTTTAAAATC+CGG | + | chr3_2:86734793-86734812 | Msa0434010:intron | 40.0% |
| ! | TTTCAATTTTACCCCTGGTC+CGG | - | chr3_2:86734862-86734881 | None:intergenic | 40.0% |
| TGCAGAAAGGAACGTACATA+AGG | + | chr3_2:86735272-86735291 | Msa0434010:intron | 40.0% | |
| AACTTCAGGCATCTCTTTGA+CGG | + | chr3_2:86735328-86735347 | Msa0434010:CDS | 40.0% | |
| !!! | TGAGTTTTCTGAAGTCCCTA+AGG | + | chr3_2:86735465-86735484 | Msa0434010:CDS | 40.0% |
| TAAGTGAGGAACCAGAGAAA+AGG | - | chr3_2:86735528-86735547 | None:intergenic | 40.0% | |
| TCCAATTGTCTCCAATGTGT+CGG | - | chr3_2:86735641-86735660 | None:intergenic | 40.0% | |
| GAGTATAGTGATTCTTTGGG+AGG | + | chr3_2:86735667-86735686 | Msa0434010:CDS | 40.0% | |
| !!! | TACCCTGGTTTTATAAGGTC+GGG | - | chr3_2:86735748-86735767 | None:intergenic | 40.0% |
| !!! | GTACCCTGGTTTTATAAGGT+CGG | - | chr3_2:86735749-86735768 | None:intergenic | 40.0% |
| !!! | CCAAGTACCCTGGTTTTATA+AGG | - | chr3_2:86735753-86735772 | None:intergenic | 40.0% |
| ! | CCTTATAAAACCAGGGTACT+TGG | + | chr3_2:86735750-86735769 | Msa0434010:CDS | 40.0% |
| ! | TATAAAACCAGGGTACTTGG+TGG | + | chr3_2:86735753-86735772 | Msa0434010:CDS | 40.0% |
| ATGAGAGGAAGGTTATTGGA+CGG | + | chr3_2:86735797-86735816 | Msa0434010:CDS | 40.0% | |
| ! | ATAGTGTTCAGTAACGGGAA+AGG | - | chr3_2:86735863-86735882 | None:intergenic | 40.0% |
| CAATACCTCAATGGCATTTC+AGG | - | chr3_2:86735895-86735914 | None:intergenic | 40.0% | |
| TTCTGAGCACAATACCTCAA+TGG | - | chr3_2:86735904-86735923 | None:intergenic | 40.0% | |
| ! | ATTGTGCTCAGAATTTGCTC+AGG | + | chr3_2:86735911-86735930 | Msa0434010:CDS | 40.0% |
| ! | TTGTGCTCAGAATTTGCTCA+GGG | + | chr3_2:86735912-86735931 | Msa0434010:CDS | 40.0% |
| !! | TGCATAAAAGCTTTGGACTC+AGG | - | chr3_2:86735973-86735992 | None:intergenic | 40.0% |
| CATGTTATGTGCAAGACTAG+TGG | + | chr3_2:86735991-86736010 | Msa0434010:CDS | 40.0% | |
| CAGAACCTTCGCTCATTTAA+TGG | + | chr3_2:86736265-86736284 | Msa0434010:CDS | 40.0% | |
| CTTTGCCATTAAATGAGCGA+AGG | - | chr3_2:86736273-86736292 | None:intergenic | 40.0% | |
| AAGATGTTCTACCAGATGCT+AGG | + | chr3_2:86736290-86736309 | Msa0434010:CDS | 40.0% | |
| CAAAATACCTACCTAGCATC+TGG | - | chr3_2:86736304-86736323 | None:intergenic | 40.0% | |
| GCTGCTTCTAATGTTCCATA+TGG | - | chr3_2:86736460-86736479 | None:intergenic | 40.0% | |
| GCATTAGACCCAAATGAACA+TGG | + | chr3_2:86736478-86736497 | Msa0434010:CDS | 40.0% | |
| TGCCTTTCCCATGTTCATTT+GGG | - | chr3_2:86736489-86736508 | None:intergenic | 40.0% | |
| ATGCCTTTCCCATGTTCATT+TGG | - | chr3_2:86736490-86736509 | None:intergenic | 40.0% | |
| AAATGAACATGGGAAAGGCA+TGG | + | chr3_2:86736489-86736508 | Msa0434010:CDS | 40.0% | |
| TACAGATATGCCTATGCTTG+TGG | + | chr3_2:86736550-86736569 | Msa0434010:CDS | 40.0% | |
| AATCAGAAAGGGCTAAGAAC+TGG | + | chr3_2:86736717-86736736 | Msa0434010:CDS | 40.0% | |
| GCTAAGAACTGGTATGAAGA+AGG | + | chr3_2:86736728-86736747 | Msa0434010:CDS | 40.0% | |
| !! | GGCACAAAAAATGGTTCTGA+GGG | - | chr3_2:86736761-86736780 | None:intergenic | 40.0% |
| ! | AGGCACAAAAAATGGTTCTG+AGG | - | chr3_2:86736762-86736781 | None:intergenic | 40.0% |
| TTACCACACCTGTCATATGA+GGG | - | chr3_2:86736882-86736901 | None:intergenic | 40.0% | |
| ATTACCACACCTGTCATATG+AGG | - | chr3_2:86736883-86736902 | None:intergenic | 40.0% | |
| TCTGGCAATCTCTTCAAAAG+TGG | - | chr3_2:86736959-86736978 | None:intergenic | 40.0% | |
| TTCCCTTATGGACTTCCATA+TGG | + | chr3_2:86736985-86737004 | Msa0434010:CDS | 40.0% | |
| ! | ATATGGATTGCATGGATGCT+GGG | + | chr3_2:86737002-86737021 | Msa0434010:CDS | 40.0% |
| CGATTATATGGATTCCCTAG+TGG | + | chr3_2:86737282-86737301 | Msa0434010:three_prime_UTR | 40.0% | |
| GTATATGCGAACAACCACTA+GGG | - | chr3_2:86737299-86737318 | None:intergenic | 40.0% | |
| AGTATATGCGAACAACCACT+AGG | - | chr3_2:86737300-86737319 | None:intergenic | 40.0% | |
| GTAACGGTCAAGTGATCTTG+AGG | - | chr3_2:86732638-86732657 | None:intergenic | 45.0% | |
| ! | TCTAAACTTTTCTCCGGTGG+TGG | - | chr3_2:86732698-86732717 | None:intergenic | 45.0% |
| ! | GTCTCTAAACTTTTCTCCGG+TGG | - | chr3_2:86732701-86732720 | None:intergenic | 45.0% |
| ACCATCAACACCATGTTGCA+TGG | + | chr3_2:86732729-86732748 | Msa0434010:CDS | 45.0% | |
| ! | TCCATGCAACATGGTGTTGA+TGG | - | chr3_2:86732733-86732752 | None:intergenic | 45.0% |
| GAAGGAGAACTGCTTGTTCA+AGG | + | chr3_2:86732776-86732795 | Msa0434010:CDS | 45.0% | |
| TCCAGTAACGTGTCAGCAAA+TGG | + | chr3_2:86733358-86733377 | Msa0434010:intron | 45.0% | |
| CCAGTAACGTGTCAGCAAAT+GGG | + | chr3_2:86733359-86733378 | Msa0434010:intron | 45.0% | |
| GGTACCCACCAGGTATATTA+CGG | + | chr3_2:86733380-86733399 | Msa0434010:intron | 45.0% | |
| GTACCCACCAGGTATATTAC+GGG | + | chr3_2:86733381-86733400 | Msa0434010:intron | 45.0% | |
| GATTCCCGTAATATACCTGG+TGG | - | chr3_2:86733388-86733407 | None:intergenic | 45.0% | |
| !!! | ATCCGGACTAGGGGTATTTT+TGG | - | chr3_2:86733537-86733556 | None:intergenic | 45.0% |
| !!! | TAGTTTTTTAGGGGTGTCGG+TGG | - | chr3_2:86733737-86733756 | None:intergenic | 45.0% |
| AGAGGTGAAGTGAAGAATGG+AGG | + | chr3_2:86733783-86733802 | Msa0434010:intron | 45.0% | |
| ! | CGGAAACCAAAGGTGTATTC+CGG | + | chr3_2:86734041-86734060 | Msa0434010:intron | 45.0% |
| TCCAGAATGCATCAGTGTCA+TGG | + | chr3_2:86734073-86734092 | Msa0434010:intron | 45.0% | |
| GGAAGGCTATTTATAGGGAG+GGG | - | chr3_2:86734202-86734221 | None:intergenic | 45.0% | |
| AGGATGGTGTGAGAAATGGT+GGG | - | chr3_2:86734229-86734248 | None:intergenic | 45.0% | |
| AGGCCAACGATGGAAAATCA+TGG | - | chr3_2:86734286-86734305 | None:intergenic | 45.0% | |
| GGGCCTCATTGAAAACTTTC+AGG | + | chr3_2:86734317-86734336 | Msa0434010:intron | 45.0% | |
| GTATGAACGGTCAATGAGGA+TGG | + | chr3_2:86734344-86734363 | Msa0434010:intron | 45.0% | |
| AGAAGAAACAAATGCCCCTG+AGG | - | chr3_2:86734471-86734490 | None:intergenic | 45.0% | |
| AAACCGAAGGAGAAGAGAAG+AGG | - | chr3_2:86734503-86734522 | None:intergenic | 45.0% | |
| AGCAGTAGTTTGGCTATTGG+AGG | - | chr3_2:86734527-86734546 | None:intergenic | 45.0% | |
| CCTAACCACTGGTATGTGAT+AGG | - | chr3_2:86734554-86734573 | None:intergenic | 45.0% | |
| CCTATCACATACCAGTGGTT+AGG | + | chr3_2:86734551-86734570 | Msa0434010:intron | 45.0% | |
| ATACCAGTGGTTAGGCTCTT+AGG | + | chr3_2:86734559-86734578 | Msa0434010:intron | 45.0% | |
| ACATAGGGGACTACAACTTC+AGG | + | chr3_2:86735314-86735333 | Msa0434010:CDS | 45.0% | |
| ACTTCAGGCATCTCTTTGAC+GGG | + | chr3_2:86735329-86735348 | Msa0434010:CDS | 45.0% | |
| TGTCTGACGGAGACACAAAA+AGG | + | chr3_2:86735598-86735617 | Msa0434010:CDS | 45.0% | |
| GTCTGACGGAGACACAAAAA+GGG | + | chr3_2:86735599-86735618 | Msa0434010:CDS | 45.0% | |
| CAATTGTCTCCAATGTGTCG+GGG | - | chr3_2:86735639-86735658 | None:intergenic | 45.0% | |
| CCAATTGTCTCCAATGTGTC+GGG | - | chr3_2:86735640-86735659 | None:intergenic | 45.0% | |
| AACTCGCTATCCGTGACAAT+GGG | - | chr3_2:86735712-86735731 | None:intergenic | 45.0% | |
| AAACTCGCTATCCGTGACAA+TGG | - | chr3_2:86735713-86735732 | None:intergenic | 45.0% | |
| ATCCCCGACCTTATAAAACC+AGG | + | chr3_2:86735742-86735761 | Msa0434010:CDS | 45.0% | |
| TCCCCGACCTTATAAAACCA+GGG | + | chr3_2:86735743-86735762 | Msa0434010:CDS | 45.0% | |
| !!! | ACCCTGGTTTTATAAGGTCG+GGG | - | chr3_2:86735747-86735766 | None:intergenic | 45.0% |
| !! | TGGAAACTGGCTCTAATGAG+AGG | + | chr3_2:86735782-86735801 | Msa0434010:CDS | 45.0% |
| !! | AACTGGCTCTAATGAGAGGA+AGG | + | chr3_2:86735786-86735805 | Msa0434010:CDS | 45.0% |
| TGAGAGGAAGGTTATTGGAC+GGG | + | chr3_2:86735798-86735817 | Msa0434010:CDS | 45.0% | |
| TTATTGGACGGGTCGATTGT+AGG | + | chr3_2:86735809-86735828 | Msa0434010:CDS | 45.0% | |
| TATTGGACGGGTCGATTGTA+GGG | + | chr3_2:86735810-86735829 | Msa0434010:CDS | 45.0% | |
| ! | GTTCAGTAACGGGAAAGGAA+TGG | - | chr3_2:86735858-86735877 | None:intergenic | 45.0% |
| TTGTGCCTGAAATGCCATTG+AGG | + | chr3_2:86735887-86735906 | Msa0434010:CDS | 45.0% | |
| !! | GATTTTGAAGGTGGCAAGTG+TGG | + | chr3_2:86736108-86736127 | Msa0434010:intron | 45.0% |
| AAGAGGAAGATGAAGATGGG+AGG | + | chr3_2:86736173-86736192 | Msa0434010:CDS | 45.0% | |
| AGAGGAAGATGAAGATGGGA+GGG | + | chr3_2:86736174-86736193 | Msa0434010:CDS | 45.0% | |
| TGTTCTACCAGATGCTAGGT+AGG | + | chr3_2:86736294-86736313 | Msa0434010:intron | 45.0% | |
| TTACATTGGCCCTTCCTGTA+AGG | + | chr3_2:86736338-86736357 | Msa0434010:intron | 45.0% | |
| ! | TGGTCGGTTTAGAATACCAC+TGG | + | chr3_2:86736426-86736445 | Msa0434010:CDS | 45.0% |
| ! | CGGTTTAGAATACCACTGGA+TGG | + | chr3_2:86736430-86736449 | Msa0434010:CDS | 45.0% |
| GACCCAAATGAACATGGGAA+AGG | + | chr3_2:86736484-86736503 | Msa0434010:CDS | 45.0% | |
| TTACCCTCATATGACAGGTG+TGG | + | chr3_2:86736876-86736895 | Msa0434010:intron | 45.0% | |
| TCCATAAGGGAACTTAGCTC+TGG | - | chr3_2:86736977-86736996 | None:intergenic | 45.0% | |
| ! | GGACTTCCATATGGATTGCA+TGG | + | chr3_2:86736994-86737013 | Msa0434010:CDS | 45.0% |
| CAGCATCCATGCAATCCATA+TGG | - | chr3_2:86737003-86737022 | None:intergenic | 45.0% | |
| ! | CATATGGATTGCATGGATGC+TGG | + | chr3_2:86737001-86737020 | Msa0434010:CDS | 45.0% |
| !!! | AAATTAATAATGTATTTTTT+CGG | - | chr3_2:86732899-86732918 | None:intergenic | 5.0% |
| !!! | TATTATTATTTTTTTTTGAA+AGG | - | chr3_2:86733099-86733118 | None:intergenic | 5.0% |
| !!! | ATTAATTTTGTTTTTAATTT+TGG | + | chr3_2:86736080-86736099 | Msa0434010:intron | 5.0% |
| !! | AAACTTTTCTCCGGTGGTGG+AGG | - | chr3_2:86732695-86732714 | None:intergenic | 50.0% |
| !! | AACATGGTGTTGATGGTCGC+CGG | - | chr3_2:86732726-86732745 | None:intergenic | 50.0% |
| AGGACATATTCCACTCTGGC+TGG | + | chr3_2:86732796-86732815 | Msa0434010:CDS | 50.0% | |
| ! | CCCATTTGCTGACACGTTAC+TGG | - | chr3_2:86733362-86733381 | None:intergenic | 50.0% |
| CTGTAGGGCTAAGGACATTC+CGG | - | chr3_2:86733965-86733984 | None:intergenic | 50.0% | |
| TGACACTTCCTGTAGGGCTA+AGG | - | chr3_2:86733974-86733993 | None:intergenic | 50.0% | |
| GCCATGACACTGATGCATTC+TGG | - | chr3_2:86734077-86734096 | None:intergenic | 50.0% | |
| GAATGCATCAGTGTCATGGC+CGG | + | chr3_2:86734077-86734096 | Msa0434010:intron | 50.0% | |
| TGACCACTGACAAACACGTG+TGG | - | chr3_2:86734112-86734131 | None:intergenic | 50.0% | |
| GTGGGTCAAAAATGGTTGGG+AGG | - | chr3_2:86734180-86734199 | None:intergenic | 50.0% | |
| GGGGTGGGTCAAAAATGGTT+GGG | - | chr3_2:86734183-86734202 | None:intergenic | 50.0% | |
| AGGGGTGGGTCAAAAATGGT+TGG | - | chr3_2:86734184-86734203 | None:intergenic | 50.0% | |
| GGCTATTTATAGGGAGGGGT+GGG | - | chr3_2:86734198-86734217 | None:intergenic | 50.0% | |
| AGGCTATTTATAGGGAGGGG+TGG | - | chr3_2:86734199-86734218 | None:intergenic | 50.0% | |
| ! | GAGAAATGGTGGGGTTTGGA+AGG | - | chr3_2:86734219-86734238 | None:intergenic | 50.0% |
| ! | GTGTGAGAAATGGTGGGGTT+TGG | - | chr3_2:86734223-86734242 | None:intergenic | 50.0% |
| GGATGGTGTGAGAAATGGTG+GGG | - | chr3_2:86734228-86734247 | None:intergenic | 50.0% | |
| GAGGATGGTGTGAGAAATGG+TGG | - | chr3_2:86734230-86734249 | None:intergenic | 50.0% | |
| GGAGAGGATGGTGTGAGAAA+TGG | - | chr3_2:86734233-86734252 | None:intergenic | 50.0% | |
| GAAGAAAGAAGAGGAGGGGA+GGG | - | chr3_2:86734258-86734277 | None:intergenic | 50.0% | |
| AGAAGAAAGAAGAGGAGGGG+AGG | - | chr3_2:86734259-86734278 | None:intergenic | 50.0% | |
| AAGAACCATACCGACCCACA+TGG | - | chr3_2:86734405-86734424 | None:intergenic | 50.0% | |
| GTTCTTAGCTTCGCCTGTCT+GGG | + | chr3_2:86734419-86734438 | Msa0434010:intron | 50.0% | |
| GAAACAAATGCCCCTGAGGA+AGG | - | chr3_2:86734467-86734486 | None:intergenic | 50.0% | |
| CGAAGGAGAAGAGAAGAGGA+GGG | - | chr3_2:86734499-86734518 | None:intergenic | 50.0% | |
| CCTCCTCTTCTCTTCTCCTT+CGG | + | chr3_2:86734497-86734516 | Msa0434010:intron | 50.0% | |
| GGCTATTGGAGGAAAACCGA+AGG | - | chr3_2:86734516-86734535 | None:intergenic | 50.0% | |
| TCTCCTAAGAGCCTAACCAC+TGG | - | chr3_2:86734565-86734584 | None:intergenic | 50.0% | |
| TGGAATACGAAATCCGGACC+AGG | + | chr3_2:86734846-86734865 | Msa0434010:intron | 50.0% | |
| GGAATACGAAATCCGGACCA+GGG | + | chr3_2:86734847-86734866 | Msa0434010:intron | 50.0% | |
| GAATACGAAATCCGGACCAG+GGG | + | chr3_2:86734848-86734867 | Msa0434010:intron | 50.0% | |
| GACGCGCAAGGAAAGACATA+GGG | + | chr3_2:86734892-86734911 | Msa0434010:intron | 50.0% | |
| ACGTACATAAGGAATGGCCC+AGG | + | chr3_2:86735283-86735302 | Msa0434010:CDS | 50.0% | |
| TAAGGAATGGCCCAGGTATG+TGG | + | chr3_2:86735290-86735309 | Msa0434010:CDS | 50.0% | |
| GCCCAGGTATGTGGAACATA+GGG | + | chr3_2:86735299-86735318 | Msa0434010:CDS | 50.0% | |
| CCCCTATGTTCCACATACCT+GGG | - | chr3_2:86735303-86735322 | None:intergenic | 50.0% | |
| CCCAGGTATGTGGAACATAG+GGG | + | chr3_2:86735300-86735319 | Msa0434010:CDS | 50.0% | |
| TCCCCTATGTTCCACATACC+TGG | - | chr3_2:86735304-86735323 | None:intergenic | 50.0% | |
| AGATTCAACTTGCCGATGGC+CGG | - | chr3_2:86735401-86735420 | None:intergenic | 50.0% | |
| CCTGAGATTCAACTTGCCGA+TGG | - | chr3_2:86735405-86735424 | None:intergenic | 50.0% | |
| ! | CCATCGGCAAGTTGAATCTC+AGG | + | chr3_2:86735402-86735421 | Msa0434010:CDS | 50.0% |
| ! | GAGCTAGCAAGCCTTTTCTC+TGG | + | chr3_2:86735514-86735533 | Msa0434010:CDS | 50.0% |
| GTTGGCATTGTCGGTAAGTG+AGG | - | chr3_2:86735542-86735561 | None:intergenic | 50.0% | |
| CTTACCGACAATGCCAACAC+AGG | + | chr3_2:86735544-86735563 | Msa0434010:CDS | 50.0% | |
| TGTGTCGGGGTCTATCACTA+TGG | - | chr3_2:86735626-86735645 | None:intergenic | 50.0% | |
| AGTGATAGACCCCGACACAT+TGG | + | chr3_2:86735627-86735646 | Msa0434010:CDS | 50.0% | |
| CCCGACACATTGGAGACAAT+TGG | + | chr3_2:86735637-86735656 | Msa0434010:CDS | 50.0% | |
| CTCTGCACATCCCATTGTCA+CGG | + | chr3_2:86735699-86735718 | Msa0434010:CDS | 50.0% | |
| ATTGGACGGGTCGATTGTAG+GGG | + | chr3_2:86735811-86735830 | Msa0434010:CDS | 50.0% | |
| GAGGGTGACTGCTGTTATTG+CGG | + | chr3_2:86736192-86736211 | Msa0434010:CDS | 50.0% | |
| CCATATGGACTTCCATCCAG+TGG | - | chr3_2:86736445-86736464 | None:intergenic | 50.0% | |
| CCACTGGATGGAAGTCCATA+TGG | + | chr3_2:86736442-86736461 | Msa0434010:CDS | 50.0% | |
| !! | GGGTGTTGGGGAAGTTACAA+GGG | - | chr3_2:86736585-86736604 | None:intergenic | 50.0% |
| !! | AGGGTGTTGGGGAAGTTACA+AGG | - | chr3_2:86736586-86736605 | None:intergenic | 50.0% |
| !! | TAACCTTGGTGAGGGTGTTG+GGG | - | chr3_2:86736597-86736616 | None:intergenic | 50.0% |
| !! | GTAACCTTGGTGAGGGTGTT+GGG | - | chr3_2:86736598-86736617 | None:intergenic | 50.0% |
| ! | AGTAACCTTGGTGAGGGTGT+TGG | - | chr3_2:86736599-86736618 | None:intergenic | 50.0% |
| CCTGGTCGAGGCACAAAAAA+TGG | - | chr3_2:86736770-86736789 | None:intergenic | 50.0% | |
| !!! | CCATTTTTTGTGCCTCGACC+AGG | + | chr3_2:86736767-86736786 | Msa0434010:CDS | 50.0% |
| TCATCTTCCTCTGTTGCTCC+TGG | - | chr3_2:86736788-86736807 | None:intergenic | 50.0% | |
| GGAGCAACAGAGGAAGATGA+TGG | + | chr3_2:86736788-86736807 | Msa0434010:CDS | 50.0% | |
| GCCAGAGCTAAGTTCCCTTA+TGG | + | chr3_2:86736973-86736992 | Msa0434010:CDS | 50.0% | |
| ATTCCACTCTGGCTGGTGAG+TGG | + | chr3_2:86732803-86732822 | Msa0434010:intron | 55.0% | |
| TTCCACTCTGGCTGGTGAGT+GGG | + | chr3_2:86732804-86732823 | Msa0434010:intron | 55.0% | |
| TCAGCAAATGGGTACCCACC+AGG | + | chr3_2:86733370-86733389 | Msa0434010:intron | 55.0% | |
| GGACGTGCAAGAAGGCAGTA+GGG | - | chr3_2:86733504-86733523 | None:intergenic | 55.0% | |
| AGGACGTGCAAGAAGGCAGT+AGG | - | chr3_2:86733505-86733524 | None:intergenic | 55.0% | |
| CGGAATGTCCTTAGCCCTAC+AGG | + | chr3_2:86733963-86733982 | Msa0434010:intron | 55.0% | |
| GCACCACACGTGTTTGTCAG+TGG | + | chr3_2:86734106-86734125 | Msa0434010:intron | 55.0% | |
| AGGGAGGGGTGGGTCAAAAA+TGG | - | chr3_2:86734188-86734207 | None:intergenic | 55.0% | |
| AAAGAAGAGGAGGGGAGGGT+GGG | - | chr3_2:86734254-86734273 | None:intergenic | 55.0% | |
| AACGAAGGGCGGTTCATCTG+AGG | + | chr3_2:86734378-86734397 | Msa0434010:intron | 55.0% | |
| ACGAAGGGCGGTTCATCTGA+GGG | + | chr3_2:86734379-86734398 | Msa0434010:intron | 55.0% | |
| GGTTCATCTGAGGGCCATGT+GGG | + | chr3_2:86734388-86734407 | Msa0434010:intron | 55.0% | |
| GGTTCTTAGCTTCGCCTGTC+TGG | + | chr3_2:86734418-86734437 | Msa0434010:intron | 55.0% | |
| AAATGCCCCTGAGGAAGGTG+GGG | - | chr3_2:86734462-86734481 | None:intergenic | 55.0% | |
| CAAATGCCCCTGAGGAAGGT+GGG | - | chr3_2:86734463-86734482 | None:intergenic | 55.0% | |
| ACAAATGCCCCTGAGGAAGG+TGG | - | chr3_2:86734464-86734483 | None:intergenic | 55.0% | |
| AGGAGAAGAGAAGAGGAGGG+CGG | - | chr3_2:86734496-86734515 | None:intergenic | 55.0% | |
| CCGAAGGAGAAGAGAAGAGG+AGG | - | chr3_2:86734500-86734519 | None:intergenic | 55.0% | |
| GGACGCGCAAGGAAAGACAT+AGG | + | chr3_2:86734891-86734910 | Msa0434010:intron | 55.0% | |
| GCGCAAGGAAAGACATAGGG+TGG | + | chr3_2:86734895-86734914 | Msa0434010:intron | 55.0% | |
| GGCCCAGGTATGTGGAACAT+AGG | + | chr3_2:86735298-86735317 | Msa0434010:CDS | 55.0% | |
| ! | CACGCCTGTGTTGGCATTGT+CGG | - | chr3_2:86735551-86735570 | None:intergenic | 55.0% |
| AACACAGGCGTGGTGAAGCT+CGG | + | chr3_2:86735559-86735578 | Msa0434010:CDS | 55.0% | |
| ! | TGGGAGGGTGGTTTGTCTGA+CGG | + | chr3_2:86735585-86735604 | Msa0434010:CDS | 55.0% |
| !! | TTGGTGGCGAGGATGGAAAC+TGG | + | chr3_2:86735769-86735788 | Msa0434010:CDS | 55.0% |
| GGAAAGGAATGGACCCAACC+GGG | - | chr3_2:86735847-86735866 | None:intergenic | 55.0% | |
| GGGAAAGGAATGGACCCAAC+CGG | - | chr3_2:86735848-86735867 | None:intergenic | 55.0% | |
| GGTGGAGCAATCACACGCGA+TGG | - | chr3_2:86732674-86732693 | None:intergenic | 60.0% | |
| GATTGCTCCACCTCCACCAC+CGG | + | chr3_2:86732682-86732701 | Msa0434010:CDS | 60.0% | |
| !!! | CTTTTCTCCGGTGGTGGAGG+TGG | - | chr3_2:86732692-86732711 | None:intergenic | 60.0% |
| !! | ATGGTGTTGATGGTCGCCGG+TGG | - | chr3_2:86732723-86732742 | None:intergenic | 60.0% |
| ATCCCACTCACCAGCCAGAG+TGG | - | chr3_2:86732809-86732828 | None:intergenic | 60.0% | |
| !! | TAGGGGTGTCGGTGGTGTCA+TGG | - | chr3_2:86733729-86733748 | None:intergenic | 60.0% |
| TGCATCAGTGTCATGGCCGG+TGG | + | chr3_2:86734080-86734099 | Msa0434010:intron | 60.0% | |
| ACACGTGTGGTGCAGACCAC+CGG | - | chr3_2:86734099-86734118 | None:intergenic | 60.0% | |
| GAAAGAAGAGGAGGGGAGGG+TGG | - | chr3_2:86734255-86734274 | None:intergenic | 60.0% | |
| ATGGAACCGCGCTGCAACGA+AGG | + | chr3_2:86734363-86734382 | Msa0434010:intron | 60.0% | |
| TGGAACCGCGCTGCAACGAA+GGG | + | chr3_2:86734364-86734383 | Msa0434010:intron | 60.0% | |
| CGGTTCATCTGAGGGCCATG+TGG | + | chr3_2:86734387-86734406 | Msa0434010:intron | 60.0% | |
| CATCTGAGGGCCATGTGGGT+CGG | + | chr3_2:86734392-86734411 | Msa0434010:intron | 60.0% | |
| GCTCAGACTTACGCCCAGAC+AGG | - | chr3_2:86734435-86734454 | None:intergenic | 60.0% | |
| AATGCCCCTGAGGAAGGTGG+GGG | - | chr3_2:86734461-86734480 | None:intergenic | 60.0% | |
| GGAGAAGAGAAGAGGAGGGC+GGG | - | chr3_2:86734495-86734514 | None:intergenic | 60.0% | |
| ! | CTTTGACGGGTACGCCACCT+TGG | + | chr3_2:86735342-86735361 | Msa0434010:CDS | 60.0% |
| GAAGTGAAGGCCGACCAAGG+TGG | - | chr3_2:86735359-86735378 | None:intergenic | 60.0% | |
| CTCGAAGTGAAGGCCGACCA+AGG | - | chr3_2:86735362-86735381 | None:intergenic | 60.0% | |
| CTTGGTCGGCCTTCACTTCG+AGG | + | chr3_2:86735360-86735379 | Msa0434010:CDS | 60.0% | |
| GTCGGCCTTCACTTCGAGGA+CGG | + | chr3_2:86735364-86735383 | Msa0434010:CDS | 60.0% | |
| TCGGCCTTCACTTCGAGGAC+GGG | + | chr3_2:86735365-86735384 | Msa0434010:CDS | 60.0% | |
| ! | GCTTGCTAGCTCCCCTACGT+AGG | - | chr3_2:86735506-86735525 | None:intergenic | 60.0% |
| CGACAATGCCAACACAGGCG+TGG | + | chr3_2:86735549-86735568 | Msa0434010:CDS | 60.0% | |
| GAGCTTCACCACGCCTGTGT+TGG | - | chr3_2:86735560-86735579 | None:intergenic | 60.0% | |
| !! | AACCAGGGTACTTGGTGGCG+AGG | + | chr3_2:86735758-86735777 | Msa0434010:CDS | 60.0% |
| ATCCTCGCCACCAAGTACCC+TGG | - | chr3_2:86735763-86735782 | None:intergenic | 60.0% | |
| !! | AGGGTACTTGGTGGCGAGGA+TGG | + | chr3_2:86735762-86735781 | Msa0434010:CDS | 60.0% |
| TGTAGGGGCGGTACATCACC+CGG | + | chr3_2:86735826-86735845 | Msa0434010:CDS | 60.0% | |
| GCGCTGTGCTCCACAAGCAT+AGG | - | chr3_2:86736563-86736582 | None:intergenic | 60.0% | |
| CTTCCCCAACACCCTCACCA+AGG | + | chr3_2:86736591-86736610 | Msa0434010:CDS | 60.0% | |
| TCCTCTGTTGCTCCTGGTCG+AGG | - | chr3_2:86736782-86736801 | None:intergenic | 60.0% | |
| AACCGCGCTGCAACGAAGGG+CGG | + | chr3_2:86734367-86734386 | Msa0434010:intron | 65.0% | |
| AACCGCCCTTCGTTGCAGCG+CGG | - | chr3_2:86734372-86734391 | None:intergenic | 65.0% | |
| GAGGGCCATGTGGGTCGGTA+TGG | + | chr3_2:86734397-86734416 | Msa0434010:intron | 65.0% | |
| ATGCCCCTGAGGAAGGTGGG+GGG | - | chr3_2:86734460-86734479 | None:intergenic | 65.0% | |
| GACGGGTACGCCACCTTGGT+CGG | + | chr3_2:86735346-86735365 | Msa0434010:CDS | 65.0% | |
| GCCTTCACTTCGAGGACGGG+CGG | + | chr3_2:86735368-86735387 | Msa0434010:CDS | 65.0% | |
| ACCGCCCGTCCTCGAAGTGA+AGG | - | chr3_2:86735372-86735391 | None:intergenic | 65.0% | |
| GAGGACGGGCGGTTAGTAGC+CGG | + | chr3_2:86735379-86735398 | Msa0434010:CDS | 65.0% | |
| GGCGGTTAGTAGCCGGCCAT+CGG | + | chr3_2:86735386-86735405 | Msa0434010:CDS | 65.0% | |
| GCGTGGTGAAGCTCGGCGAT+GGG | + | chr3_2:86735566-86735585 | Msa0434010:CDS | 65.0% | |
| TGGTGAAGCTCGGCGATGGG+AGG | + | chr3_2:86735569-86735588 | Msa0434010:CDS | 65.0% | |
| GGTGAAGCTCGGCGATGGGA+GGG | + | chr3_2:86735570-86735589 | Msa0434010:CDS | 65.0% | |
| GGACGGGTCGATTGTAGGGG+CGG | + | chr3_2:86735814-86735833 | Msa0434010:CDS | 65.0% | |
| GGGCGGTACATCACCCGGTT+GGG | + | chr3_2:86735831-86735850 | Msa0434010:CDS | 65.0% | |
| GCCTCGACCAGGAGCAACAG+AGG | + | chr3_2:86736778-86736797 | Msa0434010:CDS | 65.0% | |
| GAGGGGAGGGTGGGAGAGGA+TGG | - | chr3_2:86734245-86734264 | None:intergenic | 70.0% | |
| AGAGGAGGGGAGGGTGGGAG+AGG | - | chr3_2:86734249-86734268 | None:intergenic | 70.0% | |
| AGCACCCCCCCACCTTCCTC+AGG | + | chr3_2:86734452-86734471 | Msa0434010:intron | 70.0% | |
| GCACCCCCCCACCTTCCTCA+GGG | + | chr3_2:86734453-86734472 | Msa0434010:intron | 70.0% | |
| CACCCCCCCACCTTCCTCAG+GGG | + | chr3_2:86734454-86734473 | Msa0434010:intron | 70.0% | |
| TGCCCCTGAGGAAGGTGGGG+GGG | - | chr3_2:86734459-86734478 | None:intergenic | 70.0% | |
| GGCGTGGTGAAGCTCGGCGA+TGG | + | chr3_2:86735565-86735584 | Msa0434010:CDS | 70.0% | |
| GAAGCTCGGCGATGGGAGGG+TGG | + | chr3_2:86735573-86735592 | Msa0434010:CDS | 70.0% | |
| GGGGCGGTACATCACCCGGT+TGG | + | chr3_2:86735830-86735849 | Msa0434010:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 86732497 | 86737385 | 86732497 | ID=Msa0434010;Name=Msa0434010 |
| chr3_2 | mRNA | 86732497 | 86737385 | 86732497 | ID=Msa0434010-mRNA-1;Parent=Msa0434010;Name=Msa0434010-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0.83|1|1|1|6|347|565 |
| chr3_2 | exon | 86732497 | 86732817 | 86732497 | ID=Msa0434010-mRNA-1:exon:25149;Parent=Msa0434010-mRNA-1 |
| chr3_2 | exon | 86735277 | 86736020 | 86735277 | ID=Msa0434010-mRNA-1:exon:25150;Parent=Msa0434010-mRNA-1 |
| chr3_2 | exon | 86736118 | 86736311 | 86736118 | ID=Msa0434010-mRNA-1:exon:25151;Parent=Msa0434010-mRNA-1 |
| chr3_2 | exon | 86736423 | 86736612 | 86736423 | ID=Msa0434010-mRNA-1:exon:25152;Parent=Msa0434010-mRNA-1 |
| chr3_2 | exon | 86736707 | 86736809 | 86736707 | ID=Msa0434010-mRNA-1:exon:25153;Parent=Msa0434010-mRNA-1 |
| chr3_2 | exon | 86736893 | 86737385 | 86736893 | ID=Msa0434010-mRNA-1:exon:25154;Parent=Msa0434010-mRNA-1 |
| chr3_2 | CDS | 86732497 | 86732817 | 86732497 | ID=Msa0434010-mRNA-1:cds;Parent=Msa0434010-mRNA-1 |
| chr3_2 | CDS | 86735277 | 86736020 | 86735277 | ID=Msa0434010-mRNA-1:cds;Parent=Msa0434010-mRNA-1 |
| chr3_2 | CDS | 86736118 | 86736311 | 86736118 | ID=Msa0434010-mRNA-1:cds;Parent=Msa0434010-mRNA-1 |
| chr3_2 | CDS | 86736423 | 86736612 | 86736423 | ID=Msa0434010-mRNA-1:cds;Parent=Msa0434010-mRNA-1 |
| chr3_2 | CDS | 86736707 | 86736809 | 86736707 | ID=Msa0434010-mRNA-1:cds;Parent=Msa0434010-mRNA-1 |
| chr3_2 | CDS | 86736893 | 86737038 | 86736893 | ID=Msa0434010-mRNA-1:cds;Parent=Msa0434010-mRNA-1 |
| chr3_2 | three_prime_UTR | 86737039 | 86737385 | 86737039 | ID=Msa0434010-mRNA-1:three_prime_utr;Parent=Msa0434010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
