Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521870 | XP_003603610.1 | 95.929 | 565 | 23 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1138 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521870 | sp|Q8LIY8|CCD8B_ORYSJ | 78.054 | 483 | 106 | 0 | 83 | 565 | 83 | 565 | 0.0 | 829 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521870 | G7J3F4 | 95.929 | 565 | 23 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1138 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0383640 | Msa0521870 | 0.901812 | 1.834882e-78 | -8.615850e-47 |
| Msa0434010 | Msa0521870 | 0.966179 | 1.412686e-125 | -8.615850e-47 |
| Msa0521870 | Msa0813610 | 0.803491 | 3.398334e-49 | -8.615850e-47 |
| Msa0521870 | Msa0840540 | 0.809698 | 1.664177e-50 | -8.615850e-47 |
| Msa0521870 | Msa0903420 | 0.802725 | 4.895494e-49 | -8.615850e-47 |
| Msa0521870 | Msa1154320 | 0.815981 | 6.996335e-52 | -8.615850e-47 |
| Msa0521870 | Msa1454190 | 0.967627 | 1.542280e-127 | -8.615850e-47 |
| Msa0521870 | Msa1463640 | 0.801903 | 7.228373e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521870 | MtrunA17_Chr3g0140171 | 95.929 | 565 | 23 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1138 |
| Msa0521870 | MtrunA17_Chr7g0239811 | 96.943 | 458 | 14 | 0 | 108 | 565 | 3 | 460 | 0.0 | 932 |
| Msa0521870 | MtrunA17_Chr7g0239801 | 83.178 | 107 | 18 | 0 | 1 | 107 | 1 | 107 | 2.53e-59 | 193 |
| Msa0521870 | MtrunA17_Chr5g0407931 | 25.651 | 499 | 289 | 22 | 97 | 562 | 160 | 609 | 2.46e-26 | 113 |
| Msa0521870 | MtrunA17_Chr5g0407941 | 25.749 | 501 | 284 | 24 | 98 | 562 | 120 | 568 | 5.48e-26 | 112 |
| Msa0521870 | MtrunA17_Chr5g0407951 | 24.949 | 493 | 299 | 20 | 98 | 562 | 121 | 570 | 1.17e-23 | 105 |
| Msa0521870 | MtrunA17_Chr2g0312951 | 24.644 | 491 | 305 | 22 | 97 | 562 | 151 | 601 | 4.39e-21 | 97.4 |
| Msa0521870 | MtrunA17_Chr8g0352321 | 24.405 | 504 | 313 | 23 | 96 | 565 | 63 | 532 | 2.05e-20 | 94.7 |
| Msa0521870 | MtrunA17_Chr8g0352261 | 23.576 | 509 | 303 | 23 | 96 | 562 | 100 | 564 | 2.27e-20 | 94.7 |
| Msa0521870 | MtrunA17_Chr8g0352301 | 23.483 | 511 | 301 | 24 | 96 | 562 | 100 | 564 | 7.87e-19 | 90.1 |
| Msa0521870 | MtrunA17_Chr8g0376401 | 25.519 | 482 | 308 | 24 | 97 | 562 | 151 | 597 | 2.29e-18 | 88.6 |
| Msa0521870 | MtrunA17_Chr8g0352311 | 23.772 | 509 | 302 | 23 | 96 | 562 | 101 | 565 | 7.49e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521870 | AT4G32810.1 | 69.094 | 508 | 149 | 5 | 64 | 564 | 63 | 569 | 0.0 | 756 |
| Msa0521870 | AT4G32810.2 | 65.730 | 534 | 149 | 6 | 64 | 564 | 63 | 595 | 0.0 | 741 |
| Msa0521870 | AT1G30100.1 | 26.744 | 516 | 318 | 22 | 71 | 562 | 101 | 580 | 1.16e-27 | 117 |
| Msa0521870 | AT3G24220.1 | 25.725 | 517 | 323 | 23 | 66 | 562 | 92 | 567 | 3.19e-24 | 107 |
| Msa0521870 | AT3G63520.1 | 25.889 | 506 | 300 | 25 | 96 | 565 | 64 | 530 | 3.16e-23 | 103 |
| Msa0521870 | AT3G14440.1 | 23.611 | 504 | 344 | 19 | 73 | 562 | 113 | 589 | 7.74e-19 | 90.5 |
| Msa0521870 | AT4G18350.1 | 24.131 | 518 | 326 | 24 | 73 | 562 | 96 | 574 | 3.44e-16 | 82.4 |
Find 183 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAACCTTCGCTCATTTAA+TGG | 0.163091 | 3_4:+74905710 | Msa0521870:CDS |
| TACTTCAACCCTAGATAATT+AGG | 0.195998 | 3_4:-74905974 | None:intergenic |
| CCCCATTTCAAAGCAAAATA+TGG | 0.236830 | 3_4:+74901977 | Msa0521870:CDS |
| ATGTAAAATTAGCAATTATA+TGG | 0.243487 | 3_4:+74906733 | Msa0521870:three_prime_UTR |
| CAATACCTCAATGGCATTTC+AGG | 0.243692 | 3_4:-74905337 | None:intergenic |
| ATTTGAGTACAGTGATTCTT+TGG | 0.245117 | 3_4:+74905108 | Msa0521870:CDS |
| ATGCCTTTCCCATGTTCATT+TGG | 0.256695 | 3_4:-74905932 | None:intergenic |
| TGCCTTTCCCATGTTCATTT+GGG | 0.293559 | 3_4:-74905931 | None:intergenic |
| GCCAGAGCTAAGTTCCCTTA+TGG | 0.303157 | 3_4:+74906418 | Msa0521870:CDS |
| CTTCATATGCATTTATGAAA+TGG | 0.332304 | 3_4:-74905598 | None:intergenic |
| TCCCCTATGTTCCACATACC+TGG | 0.339270 | 3_4:-74904746 | None:intergenic |
| CGAAACAAGGGCATCTATAA+AGG | 0.339727 | 3_4:+74902047 | Msa0521870:CDS |
| CCAATTGTCTCCAATGTGTC+GGG | 0.341840 | 3_4:-74905082 | None:intergenic |
| TCATACATGTACTTCCGTTA+TGG | 0.342945 | 3_4:-74906636 | None:intergenic |
| ACTTCAACCCTAGATAATTA+GGG | 0.351152 | 3_4:-74905973 | None:intergenic |
| TCTAATGAGAGGAAGGTTAT+TGG | 0.352894 | 3_4:+74905238 | Msa0521870:CDS |
| GACTGTTGTCATTATCGTAT+TGG | 0.353383 | 3_4:+74906497 | Msa0521870:three_prime_UTR |
| CATATGGATTGCATGGATGC+TGG | 0.364734 | 3_4:+74906446 | Msa0521870:CDS |
| TGTCTGACGGAGACACAAAA+AGG | 0.364914 | 3_4:+74905043 | Msa0521870:CDS |
| CTAGTATCTCTCAAGAGAAA+TGG | 0.369443 | 3_4:+74902198 | Msa0521870:CDS |
| TTCCCTTATGGACTTCCATA+TGG | 0.378303 | 3_4:+74906430 | Msa0521870:CDS |
| GTAACCTTGGTGAGGGTGTT+GGG | 0.379272 | 3_4:-74906040 | None:intergenic |
| ATGGGGTTTCGTATTATAGA+TGG | 0.382685 | 3_4:-74901960 | None:intergenic |
| CCTTATTAAACCAGGGTACT+TGG | 0.383045 | 3_4:+74905195 | Msa0521870:CDS |
| ACATGCTTGATAACACTTGT+AGG | 0.384774 | 3_4:+74902009 | Msa0521870:CDS |
| TTATTGGACGGGTCGATTGT+AGG | 0.384903 | 3_4:+74905254 | Msa0521870:CDS |
| TATTGGACGGGTCGATTGTA+GGG | 0.385865 | 3_4:+74905255 | Msa0521870:CDS |
| CCAAGTACCCTGGTTTAATA+AGG | 0.394224 | 3_4:-74905195 | None:intergenic |
| AGCATAAACCCTAATTATCT+AGG | 0.402596 | 3_4:+74905965 | Msa0521870:CDS |
| CACGCCTGTGTTGGCATTGT+CGG | 0.410914 | 3_4:-74904993 | None:intergenic |
| TTTGAGTACAGTGATTCTTT+GGG | 0.419607 | 3_4:+74905109 | Msa0521870:CDS |
| CATAACATGCATAAAAGCTT+TGG | 0.420483 | 3_4:-74905422 | None:intergenic |
| AAATGGAGAAGGATATGCTT+TGG | 0.421784 | 3_4:+74906366 | Msa0521870:CDS |
| CCCGACACATTGGAGACAAT+TGG | 0.425582 | 3_4:+74905082 | Msa0521870:CDS |
| GCTGCTTCTAATGTTCCATA+TGG | 0.430345 | 3_4:-74905902 | None:intergenic |
| GGGCGGTACATCACCCGGTT+GGG | 0.432763 | 3_4:+74905276 | Msa0521870:CDS |
| GTCGGCCTTCACTTCGAGGA+CGG | 0.433069 | 3_4:+74904809 | Msa0521870:CDS |
| TAGTATCTCTCAAGAGAAAT+GGG | 0.438986 | 3_4:+74902199 | Msa0521870:CDS |
| AACTTCAGGCATCTCTTTGA+CGG | 0.439182 | 3_4:+74904773 | Msa0521870:CDS |
| TCCTCTGTTGCTCCTGGTCG+AGG | 0.440338 | 3_4:-74906224 | None:intergenic |
| ATAACATAGTGTTCAGTAAC+GGG | 0.440855 | 3_4:-74905310 | None:intergenic |
| TATGAAGAGGAAGATGAAGA+TGG | 0.442587 | 3_4:+74905614 | Msa0521870:CDS |
| CCACTGGATGGAAGTCCATA+TGG | 0.442857 | 3_4:+74905887 | Msa0521870:CDS |
| TACCCTGGTTTAATAAGGTC+GGG | 0.450791 | 3_4:-74905190 | None:intergenic |
| TCGGCCTTCACTTCGAGGAC+GGG | 0.453191 | 3_4:+74904810 | Msa0521870:CDS |
| TGTGTCGGGGTCTATCACTA+TGG | 0.455071 | 3_4:-74905068 | None:intergenic |
| TCCAATTGTCTCCAATGTGT+CGG | 0.457857 | 3_4:-74905083 | None:intergenic |
| CTTGGTCGGCCTTCACTTCG+AGG | 0.458257 | 3_4:+74904805 | Msa0521870:CDS |
| AATCCATATGGAAGTCCATA+AGG | 0.458996 | 3_4:-74906433 | None:intergenic |
| ACATAGGGGACTACAACTTC+AGG | 0.459853 | 3_4:+74904759 | Msa0521870:CDS |
| TCATCTTCCTCTGTTGCTCC+TGG | 0.464373 | 3_4:-74906230 | None:intergenic |
| TGGTGAAGCTCGGCGATGGG+AGG | 0.464890 | 3_4:+74905014 | Msa0521870:CDS |
| GCCCAGGTATGTGGAACATA+GGG | 0.467857 | 3_4:+74904744 | Msa0521870:CDS |
| TCCATGCAACATGGTGTTGA+TGG | 0.469071 | 3_4:-74902175 | None:intergenic |
| AATCAGAAAGGGCTAAGAAC+TGG | 0.469124 | 3_4:+74906162 | Msa0521870:CDS |
| TGAAATTTGTACAATGGAGT+TGG | 0.476527 | 3_4:-74905385 | None:intergenic |
| CAGCATCCATGCAATCCATA+TGG | 0.477535 | 3_4:-74906445 | None:intergenic |
| ATGAAGAGGAAGATGAAGAT+GGG | 0.478254 | 3_4:+74905615 | Msa0521870:CDS |
| GACGGGTACGCCACCTTGGT+CGG | 0.481643 | 3_4:+74904791 | Msa0521870:CDS |
| TGCAGAAAGGAACGTACATA+AGG | 0.482926 | 3_4:+74904717 | Msa0521870:intron |
| TTGGTGGCGAGGATGGAAAC+TGG | 0.483277 | 3_4:+74905214 | Msa0521870:CDS |
| AACTCGCTATCCGTGACAAT+GGG | 0.483621 | 3_4:-74905154 | None:intergenic |
| GAAGGAGAACTGCTTGTTCA+AGG | 0.484767 | 3_4:+74902221 | Msa0521870:CDS |
| GGGGCGGTACATCACCCGGT+TGG | 0.485866 | 3_4:+74905275 | Msa0521870:CDS |
| CCATCGGCAAGTTGAATCTC+AGG | 0.486110 | 3_4:+74904847 | Msa0521870:CDS |
| ATTGTGCTCAGAATTTGCTC+AGG | 0.486746 | 3_4:+74905356 | Msa0521870:CDS |
| CAAAATACCTACCTAGCATC+TGG | 0.489402 | 3_4:-74905746 | None:intergenic |
| TGCATAAAAGCTTTGGACTC+AGG | 0.491550 | 3_4:-74905415 | None:intergenic |
| GGGAAAGGAATGGACCCAAC+CGG | 0.491902 | 3_4:-74905290 | None:intergenic |
| AGTAACCTTGGTGAGGGTGT+TGG | 0.493425 | 3_4:-74906041 | None:intergenic |
| AACACAGGCGTGGTGAAGCT+CGG | 0.493828 | 3_4:+74905004 | Msa0521870:CDS |
| TCCATAAGGGAACTTAGCTC+TGG | 0.495616 | 3_4:-74906419 | None:intergenic |
| GGCGTGGTGAAGCTCGGCGA+TGG | 0.496361 | 3_4:+74905010 | Msa0521870:CDS |
| ATATGGATTGCATGGATGCT+GGG | 0.496428 | 3_4:+74906447 | Msa0521870:CDS |
| GGTGAAGCTCGGCGATGGGA+GGG | 0.506441 | 3_4:+74905015 | Msa0521870:CDS |
| ACCATCAACACCATGTTGCA+TGG | 0.507173 | 3_4:+74902174 | Msa0521870:CDS |
| GGACTTCCATATGGATTGCA+TGG | 0.509757 | 3_4:+74906439 | Msa0521870:CDS |
| GATTGCTCCACCTCCGCCAC+CGG | 0.510166 | 3_4:+74902127 | Msa0521870:CDS |
| GGCGGTTAGTAGCCGGCCAT+CGG | 0.511442 | 3_4:+74904831 | Msa0521870:CDS |
| TAAGGAATGGCCCAGGTATG+TGG | 0.512064 | 3_4:+74904735 | Msa0521870:CDS |
| AGGGTACTTGGTGGCGAGGA+TGG | 0.513266 | 3_4:+74905207 | Msa0521870:CDS |
| ATCCATATGGAAGTCCATAA+GGG | 0.514145 | 3_4:-74906432 | None:intergenic |
| TGGTCGGTTTAGAATACCAC+TGG | 0.515307 | 3_4:+74905871 | Msa0521870:CDS |
| GCGCTGTGCTCCACAAGCAT+AGG | 0.517620 | 3_4:-74906005 | None:intergenic |
| TAAGTGAGAAACCAGAGAAA+AGG | 0.518286 | 3_4:-74904970 | None:intergenic |
| ACTTCAGGCATCTCTTTGAC+GGG | 0.518526 | 3_4:+74904774 | Msa0521870:CDS |
| AAAATTTCTTAGCCTACGTA+GGG | 0.521712 | 3_4:+74904936 | Msa0521870:CDS |
| AGATTCAACTTGCCGATGGC+CGG | 0.528502 | 3_4:-74904843 | None:intergenic |
| TACAGATATGCCTATGCTTG+TGG | 0.531718 | 3_4:+74905995 | Msa0521870:CDS |
| GAGCTTCACCACGCCTGTGT+TGG | 0.535944 | 3_4:-74905002 | None:intergenic |
| AGGGTGTTGGGGAAGTTACA+AGG | 0.536224 | 3_4:-74906028 | None:intergenic |
| AAACTCGCTATCCGTGACAA+TGG | 0.539476 | 3_4:-74905155 | None:intergenic |
| ATCCCCGACCTTATTAAACC+AGG | 0.542364 | 3_4:+74905187 | Msa0521870:CDS |
| TTCTGAGCACAATACCTCAA+TGG | 0.542740 | 3_4:-74905346 | None:intergenic |
| GAAGCTCGGCGATGGGAGGG+TGG | 0.544082 | 3_4:+74905018 | Msa0521870:CDS |
| CTTTGACGGGTACGCCACCT+TGG | 0.546670 | 3_4:+74904787 | Msa0521870:CDS |
| AGAGGAAGATGAAGATGGGA+GGG | 0.552579 | 3_4:+74905619 | Msa0521870:CDS |
| AGATCGATCTACAATCAGAA+AGG | 0.553319 | 3_4:+74906150 | Msa0521870:intron |
| GCGTGGTGAAGCTCGGCGAT+GGG | 0.553336 | 3_4:+74905011 | Msa0521870:CDS |
| GTAACGGTCAAGTGATCTTG+AGG | 0.554054 | 3_4:-74902080 | None:intergenic |
| AGGACATATTCCACTCTGGC+TGG | 0.554078 | 3_4:+74902241 | Msa0521870:CDS |
| TGAGAGGAAGGTTATTGGAC+GGG | 0.555588 | 3_4:+74905243 | Msa0521870:CDS |
| GGCCCAGGTATGTGGAACAT+AGG | 0.555855 | 3_4:+74904743 | Msa0521870:CDS |
| TGGGAGGGTGGTTTGTCTGA+CGG | 0.556766 | 3_4:+74905030 | Msa0521870:CDS |
| GAGTACAGTGATTCTTTGGG+AGG | 0.556860 | 3_4:+74905112 | Msa0521870:CDS |
| GAGGACGGGCGGTTAGTAGC+CGG | 0.562327 | 3_4:+74904824 | Msa0521870:CDS |
| GATCGATCTACAATCAGAAA+GGG | 0.563093 | 3_4:+74906151 | Msa0521870:intron |
| GCATTAGACCCAAATGAACA+TGG | 0.563212 | 3_4:+74905923 | Msa0521870:CDS |
| TTCAAGGACATATTCCACTC+TGG | 0.567527 | 3_4:+74902237 | Msa0521870:CDS |
| TTTCATAAATGCATATGAAG+AGG | 0.569019 | 3_4:+74905601 | Msa0521870:CDS |
| GTTCAGTAACGGGAAAGGAA+TGG | 0.569137 | 3_4:-74905300 | None:intergenic |
| AACTGGCTCTAATGAGAGGA+AGG | 0.569553 | 3_4:+74905231 | Msa0521870:CDS |
| ACCGCCCGTCCTCGAAGTGA+AGG | 0.571723 | 3_4:-74904814 | None:intergenic |
| ATTGAAATAATAGGGTTGGT+CGG | 0.571946 | 3_4:+74905855 | Msa0521870:intron |
| TCTGGCAATCTCTTCAAAAG+TGG | 0.572064 | 3_4:-74906401 | None:intergenic |
| ATCCTCGCCACCAAGTACCC+TGG | 0.572517 | 3_4:-74905205 | None:intergenic |
| AGTATAAGCGAACAACCACT+AGG | 0.575374 | 3_4:-74906760 | None:intergenic |
| ATTGGACGGGTCGATTGTAG+GGG | 0.575382 | 3_4:+74905256 | Msa0521870:CDS |
| TAACCTTGGTGAGGGTGTTG+GGG | 0.575449 | 3_4:-74906039 | None:intergenic |
| TATTAAACCAGGGTACTTGG+TGG | 0.575946 | 3_4:+74905198 | Msa0521870:CDS |
| AAGAGGAAGATGAAGATGGG+AGG | 0.578297 | 3_4:+74905618 | Msa0521870:CDS |
| TTGTGCTCAGAATTTGCTCA+GGG | 0.579588 | 3_4:+74905357 | Msa0521870:CDS |
| GCATAAACCCTAATTATCTA+GGG | 0.582367 | 3_4:+74905966 | Msa0521870:CDS |
| GTACCCTGGTTTAATAAGGT+CGG | 0.582888 | 3_4:-74905191 | None:intergenic |
| AAGATGTTCTACCAGATGCT+AGG | 0.584562 | 3_4:+74905735 | Msa0521870:CDS |
| AAGAAAAGTAACCTTGGTGA+GGG | 0.584819 | 3_4:-74906047 | None:intergenic |
| GCTAAGAACTGGTATGAAGA+AGG | 0.585069 | 3_4:+74906173 | Msa0521870:CDS |
| GAAAATTTCTTAGCCTACGT+AGG | 0.586815 | 3_4:+74904935 | Msa0521870:CDS |
| CCCCTATGTTCCACATACCT+GGG | 0.587485 | 3_4:-74904745 | None:intergenic |
| ATCTCTCAAGAGAAATGGGA+AGG | 0.587980 | 3_4:+74902203 | Msa0521870:CDS |
| ACCCTGGTTTAATAAGGTCG+GGG | 0.588706 | 3_4:-74905189 | None:intergenic |
| CTCCATTGTACAAATTTCAG+TGG | 0.589016 | 3_4:+74905389 | Msa0521870:CDS |
| AGTGATAGACCCCGACACAT+TGG | 0.593877 | 3_4:+74905072 | Msa0521870:CDS |
| AAAGGAACGTACATAAGGAA+TGG | 0.595708 | 3_4:+74904722 | Msa0521870:CDS |
| CTCGAAGTGAAGGCCGACCA+AGG | 0.599301 | 3_4:-74904804 | None:intergenic |
| GGTGGAGCAATCACACGTGA+TGG | 0.601929 | 3_4:-74902116 | None:intergenic |
| CTCTGCACATCCCATTGTCA+CGG | 0.602091 | 3_4:+74905144 | Msa0521870:CDS |
| GGAAAGGAATGGACCCAACC+GGG | 0.602396 | 3_4:-74905289 | None:intergenic |
| ATAGTGTTCAGTAACGGGAA+AGG | 0.603605 | 3_4:-74905305 | None:intergenic |
| GCCTTCACTTCGAGGACGGG+CGG | 0.605814 | 3_4:+74904813 | Msa0521870:CDS |
| TGTAGGGGCGGTACATCACC+CGG | 0.606513 | 3_4:+74905271 | Msa0521870:CDS |
| CGGTTTAGAATACCACTGGA+TGG | 0.607749 | 3_4:+74905875 | Msa0521870:CDS |
| CTTTGCCATTAAATGAGCGA+AGG | 0.609125 | 3_4:-74905715 | None:intergenic |
| AATAACATAGTGTTCAGTAA+CGG | 0.609373 | 3_4:-74905311 | None:intergenic |
| AACCAGGGTACTTGGTGGCG+AGG | 0.609453 | 3_4:+74905203 | Msa0521870:CDS |
| CATGTTATGTGCAAGACTAG+TGG | 0.609567 | 3_4:+74905436 | Msa0521870:CDS |
| AAAGAAAAGTAACCTTGGTG+AGG | 0.610236 | 3_4:-74906048 | None:intergenic |
| CAATTATATGGATTCCCTAG+TGG | 0.610877 | 3_4:+74906745 | Msa0521870:three_prime_UTR |
| GACCCAAATGAACATGGGAA+AGG | 0.610952 | 3_4:+74905929 | Msa0521870:CDS |
| TTGTGCCTGAAATGCCATTG+AGG | 0.611330 | 3_4:+74905332 | Msa0521870:CDS |
| AAATGAACATGGGAAAGGCA+TGG | 0.612023 | 3_4:+74905934 | Msa0521870:CDS |
| GTTTCGTATTATAGATGGTG+AGG | 0.614377 | 3_4:-74901955 | None:intergenic |
| TCCCCGACCTTATTAAACCA+GGG | 0.616538 | 3_4:+74905188 | Msa0521870:CDS |
| GGAGCAACAGAGGAAGATGA+TGG | 0.616543 | 3_4:+74906233 | Msa0521870:CDS |
| ATGAGAGGAAGGTTATTGGA+CGG | 0.618133 | 3_4:+74905242 | Msa0521870:CDS |
| TGCCACTGAAATTTGTACAA+TGG | 0.622547 | 3_4:-74905391 | None:intergenic |
| GAGGGTGACTGCTGTTATTG+CGG | 0.628329 | 3_4:+74905637 | Msa0521870:CDS |
| AACATGGTGTTGATGGTCGC+CGG | 0.628701 | 3_4:-74902168 | None:intergenic |
| ACGTACATAAGGAATGGCCC+AGG | 0.629963 | 3_4:+74904728 | Msa0521870:CDS |
| GCCTCGACCAGGAGCAACAG+AGG | 0.630798 | 3_4:+74906223 | Msa0521870:CDS |
| TGGAAACTGGCTCTAATGAG+AGG | 0.631356 | 3_4:+74905227 | Msa0521870:CDS |
| CAATTGTCTCCAATGTGTCG+GGG | 0.633425 | 3_4:-74905081 | None:intergenic |
| CCATATGGACTTCCATCCAG+TGG | 0.639234 | 3_4:-74905887 | None:intergenic |
| AAATGGAAAGTAACGAACAA+AGG | 0.641051 | 3_4:-74905581 | None:intergenic |
| AAGCTGATAGCAATCCATAA+CGG | 0.641754 | 3_4:+74906622 | Msa0521870:three_prime_UTR |
| AACCCACTCACCAGCCAGAG+TGG | 0.642994 | 3_4:-74902251 | None:intergenic |
| AGATACTAGTCCATGCAACA+TGG | 0.643055 | 3_4:-74902184 | None:intergenic |
| CCTGAGATTCAACTTGCCGA+TGG | 0.643276 | 3_4:-74904847 | None:intergenic |
| GAGAAAAGTTTAGAGACCAC+CGG | 0.644252 | 3_4:+74902149 | Msa0521870:CDS |
| CGACAATGCCAACACAGGCG+TGG | 0.649077 | 3_4:+74904994 | Msa0521870:CDS |
| TGGTGAGGCTGTGAAAGCCA+TGG | 0.651294 | 3_4:-74901940 | None:intergenic |
| CATTAGACCCAAATGAACAT+GGG | 0.657991 | 3_4:+74905924 | Msa0521870:CDS |
| GTATAAGCGAACAACCACTA+GGG | 0.661953 | 3_4:-74906759 | None:intergenic |
| TGGACTCGCAACATTTGTAA+CGG | 0.664964 | 3_4:-74902096 | None:intergenic |
| GGGTGTTGGGGAAGTTACAA+GGG | 0.668827 | 3_4:-74906027 | None:intergenic |
| GCTTGCTAGCTCCCCTACGT+AGG | 0.674811 | 3_4:-74904948 | None:intergenic |
| CTTACCGACAATGCCAACAC+AGG | 0.676631 | 3_4:+74904989 | Msa0521870:CDS |
| CCCAGGTATGTGGAACATAG+GGG | 0.677812 | 3_4:+74904745 | Msa0521870:CDS |
| CTTCCCCAACACCCTCACCA+AGG | 0.691072 | 3_4:+74906036 | Msa0521870:CDS |
| ATGGTGTTGATGGTCGCCGG+TGG | 0.692693 | 3_4:-74902165 | None:intergenic |
| GGACGGGTCGATTGTAGGGG+CGG | 0.705064 | 3_4:+74905259 | Msa0521870:CDS |
| GAAGTGAAGGCCGACCAAGG+TGG | 0.710579 | 3_4:-74904801 | None:intergenic |
| AAATTTCTTAGCCTACGTAG+GGG | 0.750129 | 3_4:+74904937 | Msa0521870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATTTTTAATAATATA+TGG | - | chr3_4:74902750-74902769 | None:intergenic | 0.0% |
| !! | TAATAATAAATAAAGATACA+TGG | + | chr3_4:74902556-74902575 | Msa0521870:intron | 10.0% |
| !!! | ATATTTTTAATAATATATGG+AGG | - | chr3_4:74902747-74902766 | None:intergenic | 10.0% |
| !!! | AATCAATTATTATACTTTTA+AGG | + | chr3_4:74902880-74902899 | Msa0521870:intron | 10.0% |
| !!! | ATCAATTATTATACTTTTAA+GGG | + | chr3_4:74902881-74902900 | Msa0521870:intron | 10.0% |
| !! | TGATACTATAAATCTTTAAA+TGG | - | chr3_4:74902478-74902497 | None:intergenic | 15.0% |
| !!! | TAGTATGTTTTAAATTTTGT+TGG | - | chr3_4:74902681-74902700 | None:intergenic | 15.0% |
| !!! | AAAATTTAAAACATACTAAG+CGG | + | chr3_4:74902683-74902702 | Msa0521870:intron | 15.0% |
| !!! | ATATTTTTGGAAATATTACA+GGG | - | chr3_4:74902972-74902991 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTAGTTTTTTAG+GGG | - | chr3_4:74903194-74903213 | None:intergenic | 15.0% |
| !!! | CAAATGTTTTTAGTTTTTTA+GGG | - | chr3_4:74903195-74903214 | None:intergenic | 15.0% |
| !!! | TCAAATGTTTTTAGTTTTTT+AGG | - | chr3_4:74903196-74903215 | None:intergenic | 15.0% |
| !! | AAAATACTAATAATTCATTC+CGG | + | chr3_4:74904272-74904291 | Msa0521870:intron | 15.0% |
| !! | GTAAATTTGGAAAAAAAATA+GGG | + | chr3_4:74904316-74904335 | Msa0521870:intron | 15.0% |
| !!! | ACATCTTAATTATTTTACAT+TGG | + | chr3_4:74905769-74905788 | Msa0521870:intron | 15.0% |
| !! | TCATTGTTTATTGAAATAAT+AGG | + | chr3_4:74905846-74905865 | Msa0521870:intron | 15.0% |
| !! | CATTGTTTATTGAAATAATA+GGG | + | chr3_4:74905847-74905866 | Msa0521870:intron | 15.0% |
| !! | ATGTAAAATTAGCAATTATA+TGG | + | chr3_4:74906733-74906752 | Msa0521870:three_prime_UTR | 15.0% |
| !! | CGGCAATAAAAATATAAAAT+TGG | - | chr3_4:74902324-74902343 | None:intergenic | 20.0% |
| !! | TAACATTTCTTAAAAGAAAG+AGG | + | chr3_4:74902422-74902441 | Msa0521870:intron | 20.0% |
| !!! | GATATTTTTGGAAATATTAC+AGG | - | chr3_4:74902973-74902992 | None:intergenic | 20.0% |
| !! | ATAGTCTAGATTATATAATC+CGG | - | chr3_4:74903002-74903021 | None:intergenic | 20.0% |
| !! | GGTAAATTTGGAAAAAAAAT+AGG | + | chr3_4:74904315-74904334 | Msa0521870:intron | 20.0% |
| !! | ATTTATAGTAAGAACTTACA+TGG | + | chr3_4:74904562-74904581 | Msa0521870:intron | 20.0% |
| !!! | TATTAACTTGTGACATAAAA+AGG | + | chr3_4:74904639-74904658 | Msa0521870:intron | 20.0% |
| !! | TGACATAAAAAGGTTATTAT+TGG | + | chr3_4:74904649-74904668 | Msa0521870:intron | 20.0% |
| !!! | ACCATATTTTGCTTTGAAAT+GGG | - | chr3_4:74901981-74902000 | None:intergenic | 25.0% |
| !!! | AACCATATTTTGCTTTGAAA+TGG | - | chr3_4:74901982-74902001 | None:intergenic | 25.0% |
| !! | AAGTTTTCATTTCGAAACAA+GGG | + | chr3_4:74902035-74902054 | Msa0521870:CDS | 25.0% |
| ! | GATAAAAACTATGAGTGTTA+GGG | - | chr3_4:74902293-74902312 | None:intergenic | 25.0% |
| ! | TGATAAAAACTATGAGTGTT+AGG | - | chr3_4:74902294-74902313 | None:intergenic | 25.0% |
| ! | TAAATCTTTAAATGGAGTAG+TGG | - | chr3_4:74902470-74902489 | None:intergenic | 25.0% |
| !!! | TTATACTTTTAAGGGATCTA+CGG | + | chr3_4:74902889-74902908 | Msa0521870:intron | 25.0% |
| ! | AAATATCATGTACGAATCAA+TGG | - | chr3_4:74902919-74902938 | None:intergenic | 25.0% |
| ! | ACTATATTGTTAGTGATTTC+CGG | + | chr3_4:74903017-74903036 | Msa0521870:intron | 25.0% |
| ! | TGAAGAAAATTGAAGAAAAG+AGG | + | chr3_4:74903213-74903232 | Msa0521870:intron | 25.0% |
| !! | ACTTGTTTAAGGCTATAAAT+TGG | - | chr3_4:74903276-74903295 | None:intergenic | 25.0% |
| !! | TTAATCTGGAAAGTATAGTT+CGG | + | chr3_4:74903469-74903488 | Msa0521870:intron | 25.0% |
| ! | ATAAATTCAGTCAAAAAACG+TGG | - | chr3_4:74903603-74903622 | None:intergenic | 25.0% |
| ! | AGGAGATTAGAAATAGATTT+AGG | + | chr3_4:74904048-74904067 | Msa0521870:intron | 25.0% |
| !!! | TAGTATTTTTCAGATGATTC+CGG | - | chr3_4:74904261-74904280 | None:intergenic | 25.0% |
| ! | GATGAAAAAAGTAATACTCT+TGG | + | chr3_4:74904358-74904377 | Msa0521870:intron | 25.0% |
| ! | CCAAATTCAAAAAAACTAGT+GGG | - | chr3_4:74904463-74904482 | None:intergenic | 25.0% |
| ! | ACCAAATTCAAAAAAACTAG+TGG | - | chr3_4:74904464-74904483 | None:intergenic | 25.0% |
| ! | CCAAATTCAAAAAAACTAGT+GGG | - | chr3_4:74904463-74904482 | None:intergenic | 25.0% |
| ! | ACCAAATTCAAAAAAACTAG+TGG | - | chr3_4:74904464-74904483 | None:intergenic | 25.0% |
| !! | AATTATTTCTCCTCAAGAAA+GGG | - | chr3_4:74904617-74904636 | None:intergenic | 25.0% |
| !! | TAATTATTTCTCCTCAAGAA+AGG | - | chr3_4:74904618-74904637 | None:intergenic | 25.0% |
| ! | AATTGATAAATGCAAACCTA+AGG | + | chr3_4:74904675-74904694 | Msa0521870:intron | 25.0% |
| ! | AAAATTATCAACTCTTCCTT+AGG | - | chr3_4:74904694-74904713 | None:intergenic | 25.0% |
| !! | TGATAATTTTACATGCAGAA+AGG | + | chr3_4:74904704-74904723 | Msa0521870:intron | 25.0% |
| ! | AATAACATAGTGTTCAGTAA+CGG | - | chr3_4:74905314-74905333 | None:intergenic | 25.0% |
| !!! | ATTTTGGTATGTGATTTTGA+AGG | + | chr3_4:74905541-74905560 | Msa0521870:intron | 25.0% |
| ! | CTTCATATGCATTTATGAAA+TGG | - | chr3_4:74905601-74905620 | None:intergenic | 25.0% |
| ! | TTTCATAAATGCATATGAAG+AGG | + | chr3_4:74905601-74905620 | Msa0521870:CDS | 25.0% |
| ! | GTTTATTGAAATAATAGGGT+TGG | + | chr3_4:74905851-74905870 | Msa0521870:intron | 25.0% |
| ! | AAAAAAAGTTAGAACAAGGA+GGG | - | chr3_4:74906302-74906321 | None:intergenic | 25.0% |
| ! | AAAAAAAAGTTAGAACAAGG+AGG | - | chr3_4:74906303-74906322 | None:intergenic | 25.0% |
| ! | GGTAAAAAAAAGTTAGAACA+AGG | - | chr3_4:74906306-74906325 | None:intergenic | 25.0% |
| !!! | CCATATTTTGCTTTGAAATG+GGG | - | chr3_4:74901980-74901999 | None:intergenic | 30.0% |
| ! | CAAGTTTTCATTTCGAAACA+AGG | + | chr3_4:74902034-74902053 | Msa0521870:CDS | 30.0% |
| TAGTATCTCTCAAGAGAAAT+GGG | + | chr3_4:74902199-74902218 | Msa0521870:CDS | 30.0% | |
| AAGTAGAACTCGACTAATAA+TGG | - | chr3_4:74902643-74902662 | None:intergenic | 30.0% | |
| TTAAAACATACTAAGCGGAA+AGG | + | chr3_4:74902688-74902707 | Msa0521870:intron | 30.0% | |
| !! | TATACTTTTAAGGGATCTAC+GGG | + | chr3_4:74902890-74902909 | Msa0521870:intron | 30.0% |
| AGATTATATAATCCGGACTA+GGG | - | chr3_4:74902995-74903014 | None:intergenic | 30.0% | |
| TAGATTATATAATCCGGACT+AGG | - | chr3_4:74902996-74903015 | None:intergenic | 30.0% | |
| TTTGTCTTTCTTTGATGTCA+TGG | + | chr3_4:74903075-74903094 | Msa0521870:intron | 30.0% | |
| TTGTCTTTCTTTGATGTCAT+GGG | + | chr3_4:74903076-74903095 | Msa0521870:intron | 30.0% | |
| CTTGTGTGGAGTTTATATAA+CGG | - | chr3_4:74903112-74903131 | None:intergenic | 30.0% | |
| TATTACAGGGTTCATATGAA+CGG | + | chr3_4:74903141-74903160 | Msa0521870:intron | 30.0% | |
| !!! | TTTTAGTTTTTTAGGGGTGT+CGG | - | chr3_4:74903188-74903207 | None:intergenic | 30.0% |
| !! | ATGGAGGTATTTATTGAAGA+TGG | + | chr3_4:74903247-74903266 | Msa0521870:intron | 30.0% |
| ATTGACTGTATTAATGACCT+AGG | - | chr3_4:74903299-74903318 | None:intergenic | 30.0% | |
| TGAAAGAGAGTCATTAATGT+GGG | - | chr3_4:74903353-74903372 | None:intergenic | 30.0% | |
| TTGAAAGAGAGTCATTAATG+TGG | - | chr3_4:74903354-74903373 | None:intergenic | 30.0% | |
| AATCCAATGCTGAATATTTC+CGG | + | chr3_4:74903377-74903396 | Msa0521870:intron | 30.0% | |
| ! | TATTTCCGGATTTTACATTC+CGG | + | chr3_4:74903391-74903410 | Msa0521870:intron | 30.0% |
| TTTCCAGATTAATGCGATAA+TGG | - | chr3_4:74903461-74903480 | None:intergenic | 30.0% | |
| ATATTCCGGATTGTATATTC+CGG | + | chr3_4:74903503-74903522 | Msa0521870:intron | 30.0% | |
| TGGAAAATCATAGTTGTAGA+AGG | - | chr3_4:74903724-74903743 | None:intergenic | 30.0% | |
| !!! | TGATTCCGGATTTTAAAATC+CGG | - | chr3_4:74904247-74904266 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCAAATTTACCCC+TGG | - | chr3_4:74904313-74904332 | None:intergenic | 30.0% |
| ATCATGTCGTTAGCTATAAA+CGG | + | chr3_4:74904400-74904419 | Msa0521870:intron | 30.0% | |
| !!! | CCCACTAGTTTTTTTGAATT+TGG | + | chr3_4:74904460-74904479 | Msa0521870:intron | 30.0% |
| !!! | CCCACTAGTTTTTTTGAATT+TGG | + | chr3_4:74904460-74904479 | Msa0521870:intron | 30.0% |
| ! | CTAAGAAATTTTCAGCCTTA+GGG | - | chr3_4:74904928-74904947 | None:intergenic | 30.0% |
| AAAATTTCTTAGCCTACGTA+GGG | + | chr3_4:74904936-74904955 | Msa0521870:CDS | 30.0% | |
| ATTTGAGTACAGTGATTCTT+TGG | + | chr3_4:74905108-74905127 | Msa0521870:CDS | 30.0% | |
| TTTGAGTACAGTGATTCTTT+GGG | + | chr3_4:74905109-74905128 | Msa0521870:CDS | 30.0% | |
| ATAACATAGTGTTCAGTAAC+GGG | - | chr3_4:74905313-74905332 | None:intergenic | 30.0% | |
| TGAAATTTGTACAATGGAGT+TGG | - | chr3_4:74905388-74905407 | None:intergenic | 30.0% | |
| CATAACATGCATAAAAGCTT+TGG | - | chr3_4:74905425-74905444 | None:intergenic | 30.0% | |
| AAATGGAAAGTAACGAACAA+AGG | - | chr3_4:74905584-74905603 | None:intergenic | 30.0% | |
| GTATTCAATTATGACCTTAC+AGG | - | chr3_4:74905800-74905819 | None:intergenic | 30.0% | |
| ! | ATTGAAATAATAGGGTTGGT+CGG | + | chr3_4:74905855-74905874 | Msa0521870:intron | 30.0% |
| AGCATAAACCCTAATTATCT+AGG | + | chr3_4:74905965-74905984 | Msa0521870:CDS | 30.0% | |
| GCATAAACCCTAATTATCTA+GGG | + | chr3_4:74905966-74905985 | Msa0521870:CDS | 30.0% | |
| ACTTCAACCCTAGATAATTA+GGG | - | chr3_4:74905976-74905995 | None:intergenic | 30.0% | |
| TACTTCAACCCTAGATAATT+AGG | - | chr3_4:74905977-74905996 | None:intergenic | 30.0% | |
| CATACAAAGAAAAGTAACCT+TGG | - | chr3_4:74906056-74906075 | None:intergenic | 30.0% | |
| TCAACTAAATGTATGTTGGT+GGG | - | chr3_4:74906108-74906127 | None:intergenic | 30.0% | |
| TTCAACTAAATGTATGTTGG+TGG | - | chr3_4:74906109-74906128 | None:intergenic | 30.0% | |
| ACGTTCAACTAAATGTATGT+TGG | - | chr3_4:74906112-74906131 | None:intergenic | 30.0% | |
| AAAAAAGTTAGAACAAGGAG+GGG | - | chr3_4:74906301-74906320 | None:intergenic | 30.0% | |
| !!! | TTTTTTTACCCTCATATGAC+AGG | + | chr3_4:74906316-74906335 | Msa0521870:intron | 30.0% |
| ! | TAGTCACACTTTTACTGTTT+TGG | - | chr3_4:74906475-74906494 | None:intergenic | 30.0% |
| GTTTCGTATTATAGATGGTG+AGG | - | chr3_4:74901958-74901977 | None:intergenic | 35.0% | |
| ATGGGGTTTCGTATTATAGA+TGG | - | chr3_4:74901963-74901982 | None:intergenic | 35.0% | |
| CCCCATTTCAAAGCAAAATA+TGG | + | chr3_4:74901977-74901996 | Msa0521870:CDS | 35.0% | |
| ! | ACATGCTTGATAACACTTGT+AGG | + | chr3_4:74902009-74902028 | Msa0521870:CDS | 35.0% |
| CTAGTATCTCTCAAGAGAAA+TGG | + | chr3_4:74902198-74902217 | Msa0521870:CDS | 35.0% | |
| GTAACATTCACTTCAAGTAG+AGG | - | chr3_4:74902618-74902637 | None:intergenic | 35.0% | |
| TAGAACTCGACTAATAATGG+TGG | - | chr3_4:74902640-74902659 | None:intergenic | 35.0% | |
| GACAAACCAATATTACGTGT+AGG | - | chr3_4:74902785-74902804 | None:intergenic | 35.0% | |
| TTCCAAAAATATCCCTAGTC+CGG | + | chr3_4:74902980-74902999 | Msa0521870:intron | 35.0% | |
| !!! | CTGGTTCGGATTTAATTTTC+CGG | - | chr3_4:74903039-74903058 | None:intergenic | 35.0% |
| ! | AAAAAAAAGCGCACAACATC+TGG | - | chr3_4:74903058-74903077 | None:intergenic | 35.0% |
| TAATAGCATTTCAGCTTGTG+TGG | - | chr3_4:74903126-74903145 | None:intergenic | 35.0% | |
| ACAAGCTGAAATGCTATTAC+AGG | + | chr3_4:74903127-74903146 | Msa0521870:intron | 35.0% | |
| CAAGCTGAAATGCTATTACA+GGG | + | chr3_4:74903128-74903147 | Msa0521870:intron | 35.0% | |
| AAAAGAGGTGAAGTGAAGAA+TGG | + | chr3_4:74903228-74903247 | Msa0521870:intron | 35.0% | |
| ! | TATAGCCTTAAACAAGTCCT+AGG | + | chr3_4:74903279-74903298 | Msa0521870:intron | 35.0% |
| ! | AATGACCTAGGACTTGTTTA+AGG | - | chr3_4:74903287-74903306 | None:intergenic | 35.0% |
| AGTCAATGAAAACGTGTTAG+TGG | + | chr3_4:74903312-74903331 | Msa0521870:intron | 35.0% | |
| AATCCGGAAATATTCAGCAT+TGG | - | chr3_4:74903383-74903402 | None:intergenic | 35.0% | |
| ACATTCCGGAATGTAAAATC+CGG | - | chr3_4:74903399-74903418 | None:intergenic | 35.0% | |
| TCACCATTATCGCATTAATC+TGG | + | chr3_4:74903455-74903474 | Msa0521870:intron | 35.0% | |
| AAGTATAGTTCGGAAACCAA+AGG | + | chr3_4:74903479-74903498 | Msa0521870:intron | 35.0% | |
| TACAATCCGGAATATACCTT+TGG | - | chr3_4:74903498-74903517 | None:intergenic | 35.0% | |
| GGTTTGGAAGGCTATTTATA+GGG | - | chr3_4:74903655-74903674 | None:intergenic | 35.0% | |
| ATAGTTGTAGAAGGAAGAAG+AGG | - | chr3_4:74903715-74903734 | None:intergenic | 35.0% | |
| ! | CAACTATGATTTTCCATCGT+TGG | + | chr3_4:74903728-74903747 | Msa0521870:intron | 35.0% |
| GTTTGTATGAACAGTCAATG+AGG | + | chr3_4:74903788-74903807 | Msa0521870:intron | 35.0% | |
| TATAGCAGTAGTTTGGCTAT+TGG | - | chr3_4:74903977-74903996 | None:intergenic | 35.0% | |
| GATAGGATATAGCAGTAGTT+TGG | - | chr3_4:74903984-74904003 | None:intergenic | 35.0% | |
| TATATCCTATCACATACCAG+TGG | + | chr3_4:74903993-74904012 | Msa0521870:intron | 35.0% | |
| GCTCTTAGGAGATTAGAATT+AGG | + | chr3_4:74904020-74904039 | Msa0521870:intron | 35.0% | |
| GAGATTAGAATTAGGCTCTT+AGG | + | chr3_4:74904028-74904047 | Msa0521870:intron | 35.0% | |
| GTTCTGCTAAAATACTGTTC+CGG | + | chr3_4:74904225-74904244 | Msa0521870:intron | 35.0% | |
| !!! | CTGTTCCGGATTTTAAAATC+CGG | + | chr3_4:74904239-74904258 | Msa0521870:intron | 35.0% |
| GTTTATAGCTAACGACATGA+TGG | - | chr3_4:74904401-74904420 | None:intergenic | 35.0% | |
| CTAATAACTTCCCTTTCTTG+AGG | + | chr3_4:74904604-74904623 | Msa0521870:intron | 35.0% | |
| AAAGGAACGTACATAAGGAA+TGG | + | chr3_4:74904722-74904741 | Msa0521870:CDS | 35.0% | |
| ! | GCTAAGAAATTTTCAGCCTT+AGG | - | chr3_4:74904929-74904948 | None:intergenic | 35.0% |
| GAAAATTTCTTAGCCTACGT+AGG | + | chr3_4:74904935-74904954 | Msa0521870:CDS | 35.0% | |
| AAATTTCTTAGCCTACGTAG+GGG | + | chr3_4:74904937-74904956 | Msa0521870:CDS | 35.0% | |
| TAAGTGAGAAACCAGAGAAA+AGG | - | chr3_4:74904973-74904992 | None:intergenic | 35.0% | |
| TCTAATGAGAGGAAGGTTAT+TGG | + | chr3_4:74905238-74905257 | Msa0521870:CDS | 35.0% | |
| CTCCATTGTACAAATTTCAG+TGG | + | chr3_4:74905389-74905408 | Msa0521870:CDS | 35.0% | |
| TGCCACTGAAATTTGTACAA+TGG | - | chr3_4:74905394-74905413 | None:intergenic | 35.0% | |
| !! | TTGGTATGTGATTTTGAAGG+TGG | + | chr3_4:74905544-74905563 | Msa0521870:intron | 35.0% |
| TATGAAGAGGAAGATGAAGA+TGG | + | chr3_4:74905614-74905633 | Msa0521870:CDS | 35.0% | |
| ATGAAGAGGAAGATGAAGAT+GGG | + | chr3_4:74905615-74905634 | Msa0521870:CDS | 35.0% | |
| CAATTATGACCTTACAGGAA+GGG | - | chr3_4:74905795-74905814 | None:intergenic | 35.0% | |
| TCAATTATGACCTTACAGGA+AGG | - | chr3_4:74905796-74905815 | None:intergenic | 35.0% | |
| CATTAGACCCAAATGAACAT+GGG | + | chr3_4:74905924-74905943 | Msa0521870:CDS | 35.0% | |
| AAGAAAAGTAACCTTGGTGA+GGG | - | chr3_4:74906050-74906069 | None:intergenic | 35.0% | |
| AAAGAAAAGTAACCTTGGTG+AGG | - | chr3_4:74906051-74906070 | None:intergenic | 35.0% | |
| AGATCGATCTACAATCAGAA+AGG | + | chr3_4:74906150-74906169 | Msa0521870:intron | 35.0% | |
| GATCGATCTACAATCAGAAA+GGG | + | chr3_4:74906151-74906170 | Msa0521870:intron | 35.0% | |
| TCCATCATCAGTGAGAAAAA+TGG | + | chr3_4:74906349-74906368 | Msa0521870:CDS | 35.0% | |
| !! | TCCATTTTTCTCACTGATGA+TGG | - | chr3_4:74906353-74906372 | None:intergenic | 35.0% |
| ATCAGTGAGAAAAATGGAGA+AGG | + | chr3_4:74906355-74906374 | Msa0521870:CDS | 35.0% | |
| AAATGGAGAAGGATATGCTT+TGG | + | chr3_4:74906366-74906385 | Msa0521870:CDS | 35.0% | |
| !!! | GGATATGCTTTGGTTTTAGA+TGG | + | chr3_4:74906376-74906395 | Msa0521870:CDS | 35.0% |
| ATCCATATGGAAGTCCATAA+GGG | - | chr3_4:74906435-74906454 | None:intergenic | 35.0% | |
| AATCCATATGGAAGTCCATA+AGG | - | chr3_4:74906436-74906455 | None:intergenic | 35.0% | |
| GACTGTTGTCATTATCGTAT+TGG | + | chr3_4:74906497-74906516 | Msa0521870:three_prime_UTR | 35.0% | |
| AAGCTGATAGCAATCCATAA+CGG | + | chr3_4:74906622-74906641 | Msa0521870:three_prime_UTR | 35.0% | |
| TCATACATGTACTTCCGTTA+TGG | - | chr3_4:74906639-74906658 | None:intergenic | 35.0% | |
| CAATTATATGGATTCCCTAG+TGG | + | chr3_4:74906745-74906764 | Msa0521870:three_prime_UTR | 35.0% | |
| !! | CGAAACAAGGGCATCTATAA+AGG | + | chr3_4:74902047-74902066 | Msa0521870:CDS | 40.0% |
| TGGACTCGCAACATTTGTAA+CGG | - | chr3_4:74902099-74902118 | None:intergenic | 40.0% | |
| ! | GTGGTCTCTAAACTTTTCTC+CGG | - | chr3_4:74902149-74902168 | None:intergenic | 40.0% |
| GAGAAAAGTTTAGAGACCAC+CGG | + | chr3_4:74902149-74902168 | Msa0521870:CDS | 40.0% | |
| AGATACTAGTCCATGCAACA+TGG | - | chr3_4:74902187-74902206 | None:intergenic | 40.0% | |
| ATCTCTCAAGAGAAATGGGA+AGG | + | chr3_4:74902203-74902222 | Msa0521870:CDS | 40.0% | |
| TTCAAGGACATATTCCACTC+TGG | + | chr3_4:74902237-74902256 | Msa0521870:CDS | 40.0% | |
| GCTGATCCTACACGTAATAT+TGG | + | chr3_4:74902776-74902795 | Msa0521870:intron | 40.0% | |
| ATTCCCGTAATATACCTGGT+GGG | - | chr3_4:74902832-74902851 | None:intergenic | 40.0% | |
| CTTGATTCCCGTAATATACC+TGG | - | chr3_4:74902836-74902855 | None:intergenic | 40.0% | |
| !! | ATCCGGACTAGGGATATTTT+TGG | - | chr3_4:74902985-74903004 | None:intergenic | 40.0% |
| GTCATTAATGTGGGTTTGGA+CGG | - | chr3_4:74903344-74903363 | None:intergenic | 40.0% | |
| GAGAGTCATTAATGTGGGTT+TGG | - | chr3_4:74903348-74903367 | None:intergenic | 40.0% | |
| AAAAGTTGGCACTTCCTGTA+GGG | - | chr3_4:74903428-74903447 | None:intergenic | 40.0% | |
| ! | AATGCGATAATGGTGAACGA+GGG | - | chr3_4:74903451-74903470 | None:intergenic | 40.0% |
| ! | TAATGCGATAATGGTGAACG+AGG | - | chr3_4:74903452-74903471 | None:intergenic | 40.0% |
| ! | CGGAAACCAAAGGTATATTC+CGG | + | chr3_4:74903489-74903508 | Msa0521870:intron | 40.0% |
| GCATTCCGGAATATACAATC+CGG | - | chr3_4:74903511-74903530 | None:intergenic | 40.0% | |
| TGGAAGGCTATTTATAGGGA+GGG | - | chr3_4:74903651-74903670 | None:intergenic | 40.0% | |
| TTGGAAGGCTATTTATAGGG+AGG | - | chr3_4:74903652-74903671 | None:intergenic | 40.0% | |
| GGGTTTGGAAGGCTATTTAT+AGG | - | chr3_4:74903656-74903675 | None:intergenic | 40.0% | |
| AGGATGATGTGAGAAATGGT+GGG | - | chr3_4:74903677-74903696 | None:intergenic | 40.0% | |
| TATCTATGAAAGGCCAACGA+TGG | - | chr3_4:74903744-74903763 | None:intergenic | 40.0% | |
| !! | TCGTTGGCCTTTCATAGATA+AGG | + | chr3_4:74903744-74903763 | Msa0521870:intron | 40.0% |
| !! | CGTTGGCCTTTCATAGATAA+GGG | + | chr3_4:74903745-74903764 | Msa0521870:intron | 40.0% |
| ! | AACCCTGAAAGTTTTCAACG+AGG | - | chr3_4:74903771-74903790 | None:intergenic | 40.0% |
| GTATGAACAGTCAATGAGGA+TGG | + | chr3_4:74903792-74903811 | Msa0521870:intron | 40.0% | |
| TCATTCCGGAATACGAAATC+CGG | + | chr3_4:74904286-74904305 | Msa0521870:intron | 40.0% | |
| TGCAGAAAGGAACGTACATA+AGG | + | chr3_4:74904717-74904736 | Msa0521870:intron | 40.0% | |
| AACTTCAGGCATCTCTTTGA+CGG | + | chr3_4:74904773-74904792 | Msa0521870:CDS | 40.0% | |
| !!! | TGAGTTTTCTGAAGTCCCTA+AGG | + | chr3_4:74904910-74904929 | Msa0521870:CDS | 40.0% |
| TCCAATTGTCTCCAATGTGT+CGG | - | chr3_4:74905086-74905105 | None:intergenic | 40.0% | |
| TACCCTGGTTTAATAAGGTC+GGG | - | chr3_4:74905193-74905212 | None:intergenic | 40.0% | |
| GTACCCTGGTTTAATAAGGT+CGG | - | chr3_4:74905194-74905213 | None:intergenic | 40.0% | |
| CCAAGTACCCTGGTTTAATA+AGG | - | chr3_4:74905198-74905217 | None:intergenic | 40.0% | |
| ! | CCTTATTAAACCAGGGTACT+TGG | + | chr3_4:74905195-74905214 | Msa0521870:CDS | 40.0% |
| ! | TATTAAACCAGGGTACTTGG+TGG | + | chr3_4:74905198-74905217 | Msa0521870:CDS | 40.0% |
| ATGAGAGGAAGGTTATTGGA+CGG | + | chr3_4:74905242-74905261 | Msa0521870:CDS | 40.0% | |
| ! | ATAGTGTTCAGTAACGGGAA+AGG | - | chr3_4:74905308-74905327 | None:intergenic | 40.0% |
| CAATACCTCAATGGCATTTC+AGG | - | chr3_4:74905340-74905359 | None:intergenic | 40.0% | |
| TTCTGAGCACAATACCTCAA+TGG | - | chr3_4:74905349-74905368 | None:intergenic | 40.0% | |
| ! | ATTGTGCTCAGAATTTGCTC+AGG | + | chr3_4:74905356-74905375 | Msa0521870:CDS | 40.0% |
| ! | TTGTGCTCAGAATTTGCTCA+GGG | + | chr3_4:74905357-74905376 | Msa0521870:CDS | 40.0% |
| !! | TGCATAAAAGCTTTGGACTC+AGG | - | chr3_4:74905418-74905437 | None:intergenic | 40.0% |
| CATGTTATGTGCAAGACTAG+TGG | + | chr3_4:74905436-74905455 | Msa0521870:CDS | 40.0% | |
| CAGAACCTTCGCTCATTTAA+TGG | + | chr3_4:74905710-74905729 | Msa0521870:CDS | 40.0% | |
| CTTTGCCATTAAATGAGCGA+AGG | - | chr3_4:74905718-74905737 | None:intergenic | 40.0% | |
| AAGATGTTCTACCAGATGCT+AGG | + | chr3_4:74905735-74905754 | Msa0521870:CDS | 40.0% | |
| CAAAATACCTACCTAGCATC+TGG | - | chr3_4:74905749-74905768 | None:intergenic | 40.0% | |
| GCTGCTTCTAATGTTCCATA+TGG | - | chr3_4:74905905-74905924 | None:intergenic | 40.0% | |
| GCATTAGACCCAAATGAACA+TGG | + | chr3_4:74905923-74905942 | Msa0521870:CDS | 40.0% | |
| TGCCTTTCCCATGTTCATTT+GGG | - | chr3_4:74905934-74905953 | None:intergenic | 40.0% | |
| ATGCCTTTCCCATGTTCATT+TGG | - | chr3_4:74905935-74905954 | None:intergenic | 40.0% | |
| AAATGAACATGGGAAAGGCA+TGG | + | chr3_4:74905934-74905953 | Msa0521870:CDS | 40.0% | |
| TACAGATATGCCTATGCTTG+TGG | + | chr3_4:74905995-74906014 | Msa0521870:CDS | 40.0% | |
| AATCAGAAAGGGCTAAGAAC+TGG | + | chr3_4:74906162-74906181 | Msa0521870:CDS | 40.0% | |
| GCTAAGAACTGGTATGAAGA+AGG | + | chr3_4:74906173-74906192 | Msa0521870:CDS | 40.0% | |
| !! | GGCACAAAAAATGGTTCTGA+GGG | - | chr3_4:74906206-74906225 | None:intergenic | 40.0% |
| ! | AGGCACAAAAAATGGTTCTG+AGG | - | chr3_4:74906207-74906226 | None:intergenic | 40.0% |
| TTACCACACCTGTCATATGA+GGG | - | chr3_4:74906327-74906346 | None:intergenic | 40.0% | |
| ATTACCACACCTGTCATATG+AGG | - | chr3_4:74906328-74906347 | None:intergenic | 40.0% | |
| TCTGGCAATCTCTTCAAAAG+TGG | - | chr3_4:74906404-74906423 | None:intergenic | 40.0% | |
| TTCCCTTATGGACTTCCATA+TGG | + | chr3_4:74906430-74906449 | Msa0521870:CDS | 40.0% | |
| ! | ATATGGATTGCATGGATGCT+GGG | + | chr3_4:74906447-74906466 | Msa0521870:CDS | 40.0% |
| GTATAAGCGAACAACCACTA+GGG | - | chr3_4:74906762-74906781 | None:intergenic | 40.0% | |
| AGTATAAGCGAACAACCACT+AGG | - | chr3_4:74906763-74906782 | None:intergenic | 40.0% | |
| GTAACGGTCAAGTGATCTTG+AGG | - | chr3_4:74902083-74902102 | None:intergenic | 45.0% | |
| ! | TCTAAACTTTTCTCCGGTGG+CGG | - | chr3_4:74902143-74902162 | None:intergenic | 45.0% |
| ! | GTCTCTAAACTTTTCTCCGG+TGG | - | chr3_4:74902146-74902165 | None:intergenic | 45.0% |
| ACCATCAACACCATGTTGCA+TGG | + | chr3_4:74902174-74902193 | Msa0521870:CDS | 45.0% | |
| ! | TCCATGCAACATGGTGTTGA+TGG | - | chr3_4:74902178-74902197 | None:intergenic | 45.0% |
| GAAGGAGAACTGCTTGTTCA+AGG | + | chr3_4:74902221-74902240 | Msa0521870:CDS | 45.0% | |
| TCCAGTAACGTGTCAGCAAA+TGG | + | chr3_4:74902803-74902822 | Msa0521870:intron | 45.0% | |
| CCAGTAACGTGTCAGCAAAT+GGG | + | chr3_4:74902804-74902823 | Msa0521870:intron | 45.0% | |
| GGTACCCACCAGGTATATTA+CGG | + | chr3_4:74902825-74902844 | Msa0521870:intron | 45.0% | |
| GTACCCACCAGGTATATTAC+GGG | + | chr3_4:74902826-74902845 | Msa0521870:intron | 45.0% | |
| GATTCCCGTAATATACCTGG+TGG | - | chr3_4:74902833-74902852 | None:intergenic | 45.0% | |
| AAAGCGCACAACATCTGGTT+CGG | - | chr3_4:74903053-74903072 | None:intergenic | 45.0% | |
| !!! | TAGTTTTTTAGGGGTGTCGG+TGG | - | chr3_4:74903185-74903204 | None:intergenic | 45.0% |
| AGAGGTGAAGTGAAGAATGG+AGG | + | chr3_4:74903231-74903250 | Msa0521870:intron | 45.0% | |
| GAAAAGTTGGCACTTCCTGT+AGG | - | chr3_4:74903429-74903448 | None:intergenic | 45.0% | |
| ATGGTGAACGAGGGAAAAGT+TGG | - | chr3_4:74903442-74903461 | None:intergenic | 45.0% | |
| ! | GTACCACACGTTTTTGTCAG+TGG | + | chr3_4:74903554-74903573 | Msa0521870:intron | 45.0% |
| TGACCACTGACAAAAACGTG+TGG | - | chr3_4:74903560-74903579 | None:intergenic | 45.0% | |
| GGAAGGCTATTTATAGGGAG+GGG | - | chr3_4:74903650-74903669 | None:intergenic | 45.0% | |
| ! | ATGTGAGAAATGGTGGGGTT+TGG | - | chr3_4:74903671-74903690 | None:intergenic | 45.0% |
| GGATGATGTGAGAAATGGTG+GGG | - | chr3_4:74903676-74903695 | None:intergenic | 45.0% | |
| GAGGATGATGTGAGAAATGG+TGG | - | chr3_4:74903678-74903697 | None:intergenic | 45.0% | |
| GGAGAGGATGATGTGAGAAA+TGG | - | chr3_4:74903681-74903700 | None:intergenic | 45.0% | |
| GTTGTAGAAGGAAGAAGAGG+AGG | - | chr3_4:74903712-74903731 | None:intergenic | 45.0% | |
| ACGAGGCCCTTATCTATGAA+AGG | - | chr3_4:74903754-74903773 | None:intergenic | 45.0% | |
| GGCCTCGTTGAAAACTTTCA+GGG | + | chr3_4:74903766-74903785 | Msa0521870:intron | 45.0% | |
| GAAGAAACAAATGCCCCTGA+GGG | - | chr3_4:74903917-74903936 | None:intergenic | 45.0% | |
| AGAAGAAACAAATGCCCCTG+AGG | - | chr3_4:74903918-74903937 | None:intergenic | 45.0% | |
| TATTGGAGGAAAACCGAAGG+AGG | - | chr3_4:74903960-74903979 | None:intergenic | 45.0% | |
| AGCAGTAGTTTGGCTATTGG+AGG | - | chr3_4:74903974-74903993 | None:intergenic | 45.0% | |
| CCTAACCACTGGTATGTGAT+AGG | - | chr3_4:74904001-74904020 | None:intergenic | 45.0% | |
| CCTATCACATACCAGTGGTT+AGG | + | chr3_4:74903998-74904017 | Msa0521870:intron | 45.0% | |
| ATACCAGTGGTTAGGCTCTT+AGG | + | chr3_4:74904006-74904025 | Msa0521870:intron | 45.0% | |
| TTCCAAATTTACCCCTGGTC+CGG | - | chr3_4:74904308-74904327 | None:intergenic | 45.0% | |
| ACATAGGGGACTACAACTTC+AGG | + | chr3_4:74904759-74904778 | Msa0521870:CDS | 45.0% | |
| ACTTCAGGCATCTCTTTGAC+GGG | + | chr3_4:74904774-74904793 | Msa0521870:CDS | 45.0% | |
| TGTCTGACGGAGACACAAAA+AGG | + | chr3_4:74905043-74905062 | Msa0521870:CDS | 45.0% | |
| GTCTGACGGAGACACAAAAA+GGG | + | chr3_4:74905044-74905063 | Msa0521870:CDS | 45.0% | |
| CAATTGTCTCCAATGTGTCG+GGG | - | chr3_4:74905084-74905103 | None:intergenic | 45.0% | |
| CCAATTGTCTCCAATGTGTC+GGG | - | chr3_4:74905085-74905104 | None:intergenic | 45.0% | |
| GAGTACAGTGATTCTTTGGG+AGG | + | chr3_4:74905112-74905131 | Msa0521870:CDS | 45.0% | |
| AACTCGCTATCCGTGACAAT+GGG | - | chr3_4:74905157-74905176 | None:intergenic | 45.0% | |
| AAACTCGCTATCCGTGACAA+TGG | - | chr3_4:74905158-74905177 | None:intergenic | 45.0% | |
| ATCCCCGACCTTATTAAACC+AGG | + | chr3_4:74905187-74905206 | Msa0521870:CDS | 45.0% | |
| TCCCCGACCTTATTAAACCA+GGG | + | chr3_4:74905188-74905207 | Msa0521870:CDS | 45.0% | |
| ACCCTGGTTTAATAAGGTCG+GGG | - | chr3_4:74905192-74905211 | None:intergenic | 45.0% | |
| !! | TGGAAACTGGCTCTAATGAG+AGG | + | chr3_4:74905227-74905246 | Msa0521870:CDS | 45.0% |
| !! | AACTGGCTCTAATGAGAGGA+AGG | + | chr3_4:74905231-74905250 | Msa0521870:CDS | 45.0% |
| TGAGAGGAAGGTTATTGGAC+GGG | + | chr3_4:74905243-74905262 | Msa0521870:CDS | 45.0% | |
| TTATTGGACGGGTCGATTGT+AGG | + | chr3_4:74905254-74905273 | Msa0521870:CDS | 45.0% | |
| TATTGGACGGGTCGATTGTA+GGG | + | chr3_4:74905255-74905274 | Msa0521870:CDS | 45.0% | |
| ! | GTTCAGTAACGGGAAAGGAA+TGG | - | chr3_4:74905303-74905322 | None:intergenic | 45.0% |
| TTGTGCCTGAAATGCCATTG+AGG | + | chr3_4:74905332-74905351 | Msa0521870:CDS | 45.0% | |
| !! | GATTTTGAAGGTGGCAAGTG+TGG | + | chr3_4:74905553-74905572 | Msa0521870:intron | 45.0% |
| AAGAGGAAGATGAAGATGGG+AGG | + | chr3_4:74905618-74905637 | Msa0521870:CDS | 45.0% | |
| AGAGGAAGATGAAGATGGGA+GGG | + | chr3_4:74905619-74905638 | Msa0521870:CDS | 45.0% | |
| TGTTCTACCAGATGCTAGGT+AGG | + | chr3_4:74905739-74905758 | Msa0521870:intron | 45.0% | |
| TTACATTGGCCCTTCCTGTA+AGG | + | chr3_4:74905783-74905802 | Msa0521870:intron | 45.0% | |
| ! | TGGTCGGTTTAGAATACCAC+TGG | + | chr3_4:74905871-74905890 | Msa0521870:CDS | 45.0% |
| ! | CGGTTTAGAATACCACTGGA+TGG | + | chr3_4:74905875-74905894 | Msa0521870:CDS | 45.0% |
| GACCCAAATGAACATGGGAA+AGG | + | chr3_4:74905929-74905948 | Msa0521870:CDS | 45.0% | |
| TTACCCTCATATGACAGGTG+TGG | + | chr3_4:74906321-74906340 | Msa0521870:intron | 45.0% | |
| TCCATAAGGGAACTTAGCTC+TGG | - | chr3_4:74906422-74906441 | None:intergenic | 45.0% | |
| ! | GGACTTCCATATGGATTGCA+TGG | + | chr3_4:74906439-74906458 | Msa0521870:CDS | 45.0% |
| CAGCATCCATGCAATCCATA+TGG | - | chr3_4:74906448-74906467 | None:intergenic | 45.0% | |
| ! | CATATGGATTGCATGGATGC+TGG | + | chr3_4:74906446-74906465 | Msa0521870:CDS | 45.0% |
| !!! | AAATTAATAATGTATTTTTT+CGG | - | chr3_4:74902344-74902363 | None:intergenic | 5.0% |
| !!! | TATTATTATTTTTTTTTGAA+AGG | - | chr3_4:74902544-74902563 | None:intergenic | 5.0% |
| !!! | ATTAATTTTGTTTTTAATTT+TGG | + | chr3_4:74905525-74905544 | Msa0521870:intron | 5.0% |
| !! | AACATGGTGTTGATGGTCGC+CGG | - | chr3_4:74902171-74902190 | None:intergenic | 50.0% |
| AGGACATATTCCACTCTGGC+TGG | + | chr3_4:74902241-74902260 | Msa0521870:CDS | 50.0% | |
| ! | CCCATTTGCTGACACGTTAC+TGG | - | chr3_4:74902807-74902826 | None:intergenic | 50.0% |
| CTGTAGGGCTAAGGACATTC+CGG | - | chr3_4:74903413-74903432 | None:intergenic | 50.0% | |
| TCCGGAATGCATCAGTGTCA+TGG | + | chr3_4:74903521-74903540 | Msa0521870:intron | 50.0% | |
| GCCATGACACTGATGCATTC+CGG | - | chr3_4:74903525-74903544 | None:intergenic | 50.0% | |
| GAATGCATCAGTGTCATGGC+CGG | + | chr3_4:74903525-74903544 | Msa0521870:intron | 50.0% | |
| AAACGTGTGGTACAGACCAC+CGG | - | chr3_4:74903547-74903566 | None:intergenic | 50.0% | |
| GTGGGTCAAAAATGGTTGGG+AGG | - | chr3_4:74903628-74903647 | None:intergenic | 50.0% | |
| GGGGTGGGTCAAAAATGGTT+GGG | - | chr3_4:74903631-74903650 | None:intergenic | 50.0% | |
| AGGGGTGGGTCAAAAATGGT+TGG | - | chr3_4:74903632-74903651 | None:intergenic | 50.0% | |
| GGCTATTTATAGGGAGGGGT+GGG | - | chr3_4:74903646-74903665 | None:intergenic | 50.0% | |
| AGGCTATTTATAGGGAGGGG+TGG | - | chr3_4:74903647-74903666 | None:intergenic | 50.0% | |
| ! | GAGAAATGGTGGGGTTTGGA+AGG | - | chr3_4:74903667-74903686 | None:intergenic | 50.0% |
| GAAGGAAGAAGAGGAGGAGA+GGG | - | chr3_4:74903706-74903725 | None:intergenic | 50.0% | |
| AGAAGGAAGAAGAGGAGGAG+AGG | - | chr3_4:74903707-74903726 | None:intergenic | 50.0% | |
| GGGCCTCGTTGAAAACTTTC+AGG | + | chr3_4:74903765-74903784 | Msa0521870:intron | 50.0% | |
| GGTTCATCTGAGGGTCATGT+GGG | + | chr3_4:74903836-74903855 | Msa0521870:intron | 50.0% | |
| GGCTATTGGAGGAAAACCGA+AGG | - | chr3_4:74903963-74903982 | None:intergenic | 50.0% | |
| TCTCCTAAGAGCCTAACCAC+TGG | - | chr3_4:74904012-74904031 | None:intergenic | 50.0% | |
| CTGGTCCGGATTTCGTATTC+CGG | - | chr3_4:74904294-74904313 | None:intergenic | 50.0% | |
| GGAATACGAAATCCGGACCA+GGG | + | chr3_4:74904293-74904312 | Msa0521870:intron | 50.0% | |
| GAATACGAAATCCGGACCAG+GGG | + | chr3_4:74904294-74904313 | Msa0521870:intron | 50.0% | |
| ATCCGGACCAGGGGTAAATT+TGG | + | chr3_4:74904303-74904322 | Msa0521870:intron | 50.0% | |
| GAAAAAAAATAGGGCGCGCG+AGG | + | chr3_4:74904325-74904344 | Msa0521870:intron | 50.0% | |
| ACGTACATAAGGAATGGCCC+AGG | + | chr3_4:74904728-74904747 | Msa0521870:CDS | 50.0% | |
| TAAGGAATGGCCCAGGTATG+TGG | + | chr3_4:74904735-74904754 | Msa0521870:CDS | 50.0% | |
| GCCCAGGTATGTGGAACATA+GGG | + | chr3_4:74904744-74904763 | Msa0521870:CDS | 50.0% | |
| CCCCTATGTTCCACATACCT+GGG | - | chr3_4:74904748-74904767 | None:intergenic | 50.0% | |
| CCCAGGTATGTGGAACATAG+GGG | + | chr3_4:74904745-74904764 | Msa0521870:CDS | 50.0% | |
| TCCCCTATGTTCCACATACC+TGG | - | chr3_4:74904749-74904768 | None:intergenic | 50.0% | |
| AGATTCAACTTGCCGATGGC+CGG | - | chr3_4:74904846-74904865 | None:intergenic | 50.0% | |
| CCTGAGATTCAACTTGCCGA+TGG | - | chr3_4:74904850-74904869 | None:intergenic | 50.0% | |
| ! | CCATCGGCAAGTTGAATCTC+AGG | + | chr3_4:74904847-74904866 | Msa0521870:CDS | 50.0% |
| ! | GAGCTAGCAAGCCTTTTCTC+TGG | + | chr3_4:74904959-74904978 | Msa0521870:CDS | 50.0% |
| CTTACCGACAATGCCAACAC+AGG | + | chr3_4:74904989-74905008 | Msa0521870:CDS | 50.0% | |
| TGTGTCGGGGTCTATCACTA+TGG | - | chr3_4:74905071-74905090 | None:intergenic | 50.0% | |
| AGTGATAGACCCCGACACAT+TGG | + | chr3_4:74905072-74905091 | Msa0521870:CDS | 50.0% | |
| CCCGACACATTGGAGACAAT+TGG | + | chr3_4:74905082-74905101 | Msa0521870:CDS | 50.0% | |
| CTCTGCACATCCCATTGTCA+CGG | + | chr3_4:74905144-74905163 | Msa0521870:CDS | 50.0% | |
| ATTGGACGGGTCGATTGTAG+GGG | + | chr3_4:74905256-74905275 | Msa0521870:CDS | 50.0% | |
| GAGGGTGACTGCTGTTATTG+CGG | + | chr3_4:74905637-74905656 | Msa0521870:CDS | 50.0% | |
| CCATATGGACTTCCATCCAG+TGG | - | chr3_4:74905890-74905909 | None:intergenic | 50.0% | |
| CCACTGGATGGAAGTCCATA+TGG | + | chr3_4:74905887-74905906 | Msa0521870:CDS | 50.0% | |
| !! | GGGTGTTGGGGAAGTTACAA+GGG | - | chr3_4:74906030-74906049 | None:intergenic | 50.0% |
| !! | AGGGTGTTGGGGAAGTTACA+AGG | - | chr3_4:74906031-74906050 | None:intergenic | 50.0% |
| !! | TAACCTTGGTGAGGGTGTTG+GGG | - | chr3_4:74906042-74906061 | None:intergenic | 50.0% |
| !! | GTAACCTTGGTGAGGGTGTT+GGG | - | chr3_4:74906043-74906062 | None:intergenic | 50.0% |
| ! | AGTAACCTTGGTGAGGGTGT+TGG | - | chr3_4:74906044-74906063 | None:intergenic | 50.0% |
| CCTGGTCGAGGCACAAAAAA+TGG | - | chr3_4:74906215-74906234 | None:intergenic | 50.0% | |
| !!! | CCATTTTTTGTGCCTCGACC+AGG | + | chr3_4:74906212-74906231 | Msa0521870:CDS | 50.0% |
| TCATCTTCCTCTGTTGCTCC+TGG | - | chr3_4:74906233-74906252 | None:intergenic | 50.0% | |
| GGAGCAACAGAGGAAGATGA+TGG | + | chr3_4:74906233-74906252 | Msa0521870:CDS | 50.0% | |
| GCCAGAGCTAAGTTCCCTTA+TGG | + | chr3_4:74906418-74906437 | Msa0521870:CDS | 50.0% | |
| GGTGGAGCAATCACACGTGA+TGG | - | chr3_4:74902119-74902138 | None:intergenic | 55.0% | |
| !! | AAACTTTTCTCCGGTGGCGG+AGG | - | chr3_4:74902140-74902159 | None:intergenic | 55.0% |
| ATTCCACTCTGGCTGGTGAG+TGG | + | chr3_4:74902248-74902267 | Msa0521870:intron | 55.0% | |
| TTCCACTCTGGCTGGTGAGT+GGG | + | chr3_4:74902249-74902268 | Msa0521870:intron | 55.0% | |
| TCAGCAAATGGGTACCCACC+AGG | + | chr3_4:74902815-74902834 | Msa0521870:intron | 55.0% | |
| CGGAATGTCCTTAGCCCTAC+AGG | + | chr3_4:74903411-74903430 | Msa0521870:intron | 55.0% | |
| TGGCACTTCCTGTAGGGCTA+AGG | - | chr3_4:74903422-74903441 | None:intergenic | 55.0% | |
| AGGGAGGGGTGGGTCAAAAA+TGG | - | chr3_4:74903636-74903655 | None:intergenic | 55.0% | |
| GAAGAAGAGGAGGAGAGGGT+GGG | - | chr3_4:74903702-74903721 | None:intergenic | 55.0% | |
| AACGAAGGGCGGTTCATCTG+AGG | + | chr3_4:74903826-74903845 | Msa0521870:intron | 55.0% | |
| ACGAAGGGCGGTTCATCTGA+GGG | + | chr3_4:74903827-74903846 | Msa0521870:intron | 55.0% | |
| CGGTTCATCTGAGGGTCATG+TGG | + | chr3_4:74903835-74903854 | Msa0521870:intron | 55.0% | |
| CATCTGAGGGTCATGTGGGT+CGG | + | chr3_4:74903840-74903859 | Msa0521870:intron | 55.0% | |
| GGTTCTTAGCTTCGCCTGTC+TGG | + | chr3_4:74903866-74903885 | Msa0521870:intron | 55.0% | |
| GTGGGGGTTGCTCAGACTTA+CGG | - | chr3_4:74903892-74903911 | None:intergenic | 55.0% | |
| GAAACAAATGCCCCTGAGGG+AGG | - | chr3_4:74903914-74903933 | None:intergenic | 55.0% | |
| AAACCGAAGGAGGAGGGAAG+AGG | - | chr3_4:74903950-74903969 | None:intergenic | 55.0% | |
| GGAGGAAAACCGAAGGAGGA+GGG | - | chr3_4:74903956-74903975 | None:intergenic | 55.0% | |
| TGGAGGAAAACCGAAGGAGG+AGG | - | chr3_4:74903957-74903976 | None:intergenic | 55.0% | |
| CGGAATACGAAATCCGGACC+AGG | + | chr3_4:74904292-74904311 | Msa0521870:intron | 55.0% | |
| GGCCCAGGTATGTGGAACAT+AGG | + | chr3_4:74904743-74904762 | Msa0521870:CDS | 55.0% | |
| ! | CACGCCTGTGTTGGCATTGT+CGG | - | chr3_4:74904996-74905015 | None:intergenic | 55.0% |
| AACACAGGCGTGGTGAAGCT+CGG | + | chr3_4:74905004-74905023 | Msa0521870:CDS | 55.0% | |
| ! | TGGGAGGGTGGTTTGTCTGA+CGG | + | chr3_4:74905030-74905049 | Msa0521870:CDS | 55.0% |
| !! | TTGGTGGCGAGGATGGAAAC+TGG | + | chr3_4:74905214-74905233 | Msa0521870:CDS | 55.0% |
| GGAAAGGAATGGACCCAACC+GGG | - | chr3_4:74905292-74905311 | None:intergenic | 55.0% | |
| GGGAAAGGAATGGACCCAAC+CGG | - | chr3_4:74905293-74905312 | None:intergenic | 55.0% | |
| !! | ATGGTGTTGATGGTCGCCGG+TGG | - | chr3_4:74902168-74902187 | None:intergenic | 60.0% |
| AACCCACTCACCAGCCAGAG+TGG | - | chr3_4:74902254-74902273 | None:intergenic | 60.0% | |
| GCGCGAGAAAGCAGTAGGGT+GGG | - | chr3_4:74902948-74902967 | None:intergenic | 60.0% | |
| !! | TAGGGGTGTCGGTGGTGTCA+TGG | - | chr3_4:74903177-74903196 | None:intergenic | 60.0% |
| TGCATCAGTGTCATGGCCGG+TGG | + | chr3_4:74903528-74903547 | Msa0521870:intron | 60.0% | |
| GGAAGAAGAGGAGGAGAGGG+TGG | - | chr3_4:74903703-74903722 | None:intergenic | 60.0% | |
| ATGGAACCGCGCTGCAACGA+AGG | + | chr3_4:74903811-74903830 | Msa0521870:intron | 60.0% | |
| TGGAACCGCGCTGCAACGAA+GGG | + | chr3_4:74903812-74903831 | Msa0521870:intron | 60.0% | |
| GCTCAGACTTACGGCCAGAC+AGG | - | chr3_4:74903883-74903902 | None:intergenic | 60.0% | |
| AAATGCCCCTGAGGGAGGTG+GGG | - | chr3_4:74903909-74903928 | None:intergenic | 60.0% | |
| CAAATGCCCCTGAGGGAGGT+GGG | - | chr3_4:74903910-74903929 | None:intergenic | 60.0% | |
| ACAAATGCCCCTGAGGGAGG+TGG | - | chr3_4:74903911-74903930 | None:intergenic | 60.0% | |
| CGAAGGAGGAGGGAAGAGGA+GGG | - | chr3_4:74903946-74903965 | None:intergenic | 60.0% | |
| CCTCCTCTTCCCTCCTCCTT+CGG | + | chr3_4:74903944-74903963 | Msa0521870:intron | 60.0% | |
| ! | CTTTGACGGGTACGCCACCT+TGG | + | chr3_4:74904787-74904806 | Msa0521870:CDS | 60.0% |
| GAAGTGAAGGCCGACCAAGG+TGG | - | chr3_4:74904804-74904823 | None:intergenic | 60.0% | |
| CTCGAAGTGAAGGCCGACCA+AGG | - | chr3_4:74904807-74904826 | None:intergenic | 60.0% | |
| CTTGGTCGGCCTTCACTTCG+AGG | + | chr3_4:74904805-74904824 | Msa0521870:CDS | 60.0% | |
| GTCGGCCTTCACTTCGAGGA+CGG | + | chr3_4:74904809-74904828 | Msa0521870:CDS | 60.0% | |
| TCGGCCTTCACTTCGAGGAC+GGG | + | chr3_4:74904810-74904829 | Msa0521870:CDS | 60.0% | |
| ! | GCTTGCTAGCTCCCCTACGT+AGG | - | chr3_4:74904951-74904970 | None:intergenic | 60.0% |
| CGACAATGCCAACACAGGCG+TGG | + | chr3_4:74904994-74905013 | Msa0521870:CDS | 60.0% | |
| GAGCTTCACCACGCCTGTGT+TGG | - | chr3_4:74905005-74905024 | None:intergenic | 60.0% | |
| !! | AACCAGGGTACTTGGTGGCG+AGG | + | chr3_4:74905203-74905222 | Msa0521870:CDS | 60.0% |
| ATCCTCGCCACCAAGTACCC+TGG | - | chr3_4:74905208-74905227 | None:intergenic | 60.0% | |
| !! | AGGGTACTTGGTGGCGAGGA+TGG | + | chr3_4:74905207-74905226 | Msa0521870:CDS | 60.0% |
| TGTAGGGGCGGTACATCACC+CGG | + | chr3_4:74905271-74905290 | Msa0521870:CDS | 60.0% | |
| GCGCTGTGCTCCACAAGCAT+AGG | - | chr3_4:74906008-74906027 | None:intergenic | 60.0% | |
| CTTCCCCAACACCCTCACCA+AGG | + | chr3_4:74906036-74906055 | Msa0521870:CDS | 60.0% | |
| TCCTCTGTTGCTCCTGGTCG+AGG | - | chr3_4:74906227-74906246 | None:intergenic | 60.0% | |
| GATTGCTCCACCTCCGCCAC+CGG | + | chr3_4:74902127-74902146 | Msa0521870:CDS | 65.0% | |
| !!! | CTTTTCTCCGGTGGCGGAGG+TGG | - | chr3_4:74902137-74902156 | None:intergenic | 65.0% |
| CGCGCGAGAAAGCAGTAGGG+TGG | - | chr3_4:74902949-74902968 | None:intergenic | 65.0% | |
| GGGCGCGCGAGAAAGCAGTA+GGG | - | chr3_4:74902952-74902971 | None:intergenic | 65.0% | |
| AGGGCGCGCGAGAAAGCAGT+AGG | - | chr3_4:74902953-74902972 | None:intergenic | 65.0% | |
| AGAGGAGGAGAGGGTGGGAG+AGG | - | chr3_4:74903697-74903716 | None:intergenic | 65.0% | |
| AACCGCGCTGCAACGAAGGG+CGG | + | chr3_4:74903815-74903834 | Msa0521870:intron | 65.0% | |
| AACCGCCCTTCGTTGCAGCG+CGG | - | chr3_4:74903820-74903839 | None:intergenic | 65.0% | |
| GAGGGTCATGTGGGTCGGTG+TGG | + | chr3_4:74903845-74903864 | Msa0521870:intron | 65.0% | |
| AGCAACCCCCACCTCCCTCA+GGG | + | chr3_4:74903900-74903919 | Msa0521870:intron | 65.0% | |
| AATGCCCCTGAGGGAGGTGG+GGG | - | chr3_4:74903908-74903927 | None:intergenic | 65.0% | |
| AGGAGGAGGGAAGAGGAGGG+CGG | - | chr3_4:74903943-74903962 | None:intergenic | 65.0% | |
| CCGAAGGAGGAGGGAAGAGG+AGG | - | chr3_4:74903947-74903966 | None:intergenic | 65.0% | |
| GGGCGCGCGAGGAAATGCAT+AGG | + | chr3_4:74904336-74904355 | Msa0521870:intron | 65.0% | |
| GACGGGTACGCCACCTTGGT+CGG | + | chr3_4:74904791-74904810 | Msa0521870:CDS | 65.0% | |
| GCCTTCACTTCGAGGACGGG+CGG | + | chr3_4:74904813-74904832 | Msa0521870:CDS | 65.0% | |
| ACCGCCCGTCCTCGAAGTGA+AGG | - | chr3_4:74904817-74904836 | None:intergenic | 65.0% | |
| GAGGACGGGCGGTTAGTAGC+CGG | + | chr3_4:74904824-74904843 | Msa0521870:CDS | 65.0% | |
| GGCGGTTAGTAGCCGGCCAT+CGG | + | chr3_4:74904831-74904850 | Msa0521870:CDS | 65.0% | |
| GCGTGGTGAAGCTCGGCGAT+GGG | + | chr3_4:74905011-74905030 | Msa0521870:CDS | 65.0% | |
| TGGTGAAGCTCGGCGATGGG+AGG | + | chr3_4:74905014-74905033 | Msa0521870:CDS | 65.0% | |
| GGTGAAGCTCGGCGATGGGA+GGG | + | chr3_4:74905015-74905034 | Msa0521870:CDS | 65.0% | |
| GGACGGGTCGATTGTAGGGG+CGG | + | chr3_4:74905259-74905278 | Msa0521870:CDS | 65.0% | |
| GGGCGGTACATCACCCGGTT+GGG | + | chr3_4:74905276-74905295 | Msa0521870:CDS | 65.0% | |
| GCCTCGACCAGGAGCAACAG+AGG | + | chr3_4:74906223-74906242 | Msa0521870:CDS | 65.0% | |
| GAGCAACCCCCACCTCCCTC+AGG | + | chr3_4:74903899-74903918 | Msa0521870:intron | 70.0% | |
| GCAACCCCCACCTCCCTCAG+GGG | + | chr3_4:74903901-74903920 | Msa0521870:intron | 70.0% | |
| GGAGGAGGGAAGAGGAGGGC+GGG | - | chr3_4:74903942-74903961 | None:intergenic | 70.0% | |
| GGCGTGGTGAAGCTCGGCGA+TGG | + | chr3_4:74905010-74905029 | Msa0521870:CDS | 70.0% | |
| GAAGCTCGGCGATGGGAGGG+TGG | + | chr3_4:74905018-74905037 | Msa0521870:CDS | 70.0% | |
| GGGGCGGTACATCACCCGGT+TGG | + | chr3_4:74905275-74905294 | Msa0521870:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 74901942 | 74906848 | 74901942 | ID=Msa0521870;Name=Msa0521870 |
| chr3_4 | mRNA | 74901942 | 74906848 | 74901942 | ID=Msa0521870-mRNA-1;Parent=Msa0521870;Name=Msa0521870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0.83|1|1|1|6|365|565 |
| chr3_4 | exon | 74901942 | 74902262 | 74901942 | ID=Msa0521870-mRNA-1:exon:21320;Parent=Msa0521870-mRNA-1 |
| chr3_4 | exon | 74904722 | 74905465 | 74904722 | ID=Msa0521870-mRNA-1:exon:21321;Parent=Msa0521870-mRNA-1 |
| chr3_4 | exon | 74905563 | 74905756 | 74905563 | ID=Msa0521870-mRNA-1:exon:21322;Parent=Msa0521870-mRNA-1 |
| chr3_4 | exon | 74905868 | 74906057 | 74905868 | ID=Msa0521870-mRNA-1:exon:21323;Parent=Msa0521870-mRNA-1 |
| chr3_4 | exon | 74906152 | 74906254 | 74906152 | ID=Msa0521870-mRNA-1:exon:21324;Parent=Msa0521870-mRNA-1 |
| chr3_4 | exon | 74906338 | 74906848 | 74906338 | ID=Msa0521870-mRNA-1:exon:21325;Parent=Msa0521870-mRNA-1 |
| chr3_4 | CDS | 74901942 | 74902262 | 74901942 | ID=Msa0521870-mRNA-1:cds;Parent=Msa0521870-mRNA-1 |
| chr3_4 | CDS | 74904722 | 74905465 | 74904722 | ID=Msa0521870-mRNA-1:cds;Parent=Msa0521870-mRNA-1 |
| chr3_4 | CDS | 74905563 | 74905756 | 74905563 | ID=Msa0521870-mRNA-1:cds;Parent=Msa0521870-mRNA-1 |
| chr3_4 | CDS | 74905868 | 74906057 | 74905868 | ID=Msa0521870-mRNA-1:cds;Parent=Msa0521870-mRNA-1 |
| chr3_4 | CDS | 74906152 | 74906254 | 74906152 | ID=Msa0521870-mRNA-1:cds;Parent=Msa0521870-mRNA-1 |
| chr3_4 | CDS | 74906338 | 74906483 | 74906338 | ID=Msa0521870-mRNA-1:cds;Parent=Msa0521870-mRNA-1 |
| chr3_4 | three_prime_UTR | 74906484 | 74906848 | 74906484 | ID=Msa0521870-mRNA-1:three_prime_utr;Parent=Msa0521870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
