AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0438260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0438260 MtrunA17_Chr3g0094061 94.964 278 7 2 1 274 1 275 0.0 531
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0438260 AT2G26840.1 51.181 254 96 5 20 268 14 244 3.72e-79 241
Msa0438260 AT2G26840.2 41.694 307 98 7 20 268 14 297 5.09e-68 214
Msa0438260 AT3G43910.1 43.125 160 83 6 109 267 28 180 2.02e-32 119

Find 71 sgRNAs with CRISPR-Local

Find 888 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTACGGGAACTATGATTTC+AGG 0.200792 3_3:+2569999 None:intergenic
GAACTATGATTTCAGGGTTT+TGG 0.206905 3_3:+2570006 None:intergenic
GTTTGGGTTTGGTGAAATTC+TGG 0.207215 3_3:+2570116 None:intergenic
TAGGCACTTGGCTTTGGTTT+TGG 0.236356 3_3:+2560117 None:intergenic
GGAATTGACCCAGATGTTTC+TGG 0.244410 3_3:-2569810 Msa0438260:CDS
GGCTGGTGGAGTGGAGGATT+CGG 0.301141 3_3:-2562925 Msa0438260:CDS
TGAGACCATCATTGACAAAT+TGG 0.305971 3_3:-2560093 Msa0438260:CDS
ATGCTCAACTCAAGGAAAAT+TGG 0.311081 3_3:-2569932 Msa0438260:CDS
CGAAAATCGAGGGCTCTAAA+TGG 0.325160 3_3:-2569839 Msa0438260:CDS
TCGGGTATGGGCTGTGGATT+GGG 0.326541 3_3:-2562906 Msa0438260:CDS
TTAATGATGATGAAAATAAA+AGG 0.330177 3_3:+2570175 None:intergenic
ACATAGTATACAATATAATT+AGG 0.335986 3_3:+2559982 None:intergenic
AAGAGAGTTTGTTCATGAAA+TGG 0.342814 3_3:+2570093 None:intergenic
TCTCAGTAGGCACTTGGCTT+TGG 0.349465 3_3:+2560111 None:intergenic
AGAAATGATGGGTTTGAGTT+TGG 0.349587 3_3:+2570070 None:intergenic
GCTTTATTAATTGCTGCATA+TGG 0.364730 3_3:-2560146 Msa0438260:CDS
TGCTTCCCATCTTGTGGAAA+AGG 0.367201 3_3:+2566548 None:intergenic
GTTTGTTCATGAAATGGGTT+TGG 0.371212 3_3:+2570099 None:intergenic
AGAGAGTTTGTTCATGAAAT+GGG 0.371272 3_3:+2570094 None:intergenic
GGTTTCCAATTTGTCAATGA+TGG 0.375597 3_3:+2560088 None:intergenic
TTCGGGTATGGGCTGTGGAT+TGG 0.377909 3_3:-2562907 Msa0438260:CDS
CCTCATGTGCAATTACTTGT+TGG 0.379888 3_3:-2567303 Msa0438260:CDS
GCTGGTGGAGTGGAGGATTC+GGG 0.389986 3_3:-2562924 Msa0438260:CDS
TCATGAAATGGGTTTGGGTT+TGG 0.402797 3_3:+2570105 None:intergenic
TGGAGTGGAGGATTCGGGTA+TGG 0.408112 3_3:-2562919 Msa0438260:CDS
GATCAACTGAACAATAGAAT+TGG 0.421942 3_3:+2567254 None:intergenic
TTTGTTCATGAAATGGGTTT+GGG 0.425695 3_3:+2570100 None:intergenic
GAAGGATCTGAAAGAAATGA+TGG 0.432969 3_3:+2570058 None:intergenic
ATTGGGATCTTAGTTTCCTC+AGG 0.433584 3_3:-2562889 Msa0438260:CDS
AAAGCGAAGTTTGAACTCTC+TGG 0.433894 3_3:-2562832 Msa0438260:CDS
GAGGATTCGGGTATGGGCTG+TGG 0.444462 3_3:-2562912 Msa0438260:CDS
GAGGGCTCTAAATGGTTTCT+CGG 0.446287 3_3:-2569831 Msa0438260:CDS
GCAACAGCACCAGAAACATC+TGG 0.452692 3_3:+2569801 None:intergenic
TGATTCTGTTTGCTCTGCTC+AGG 0.454385 3_3:-2569763 Msa0438260:intron
GGAGTGGAGGATTCGGGTAT+GGG 0.460772 3_3:-2562918 Msa0438260:CDS
CACTGAGTTCCCTGTTAACC+AGG 0.463712 3_3:-2561158 Msa0438260:CDS
TACAATTAGCAATCAAATCA+TGG 0.468603 3_3:+2560008 None:intergenic
TTACGGGAACTATGATTTCA+GGG 0.475968 3_3:+2570000 None:intergenic
GCTTCCCATCTTGTGGAAAA+GGG 0.481024 3_3:+2566549 None:intergenic
GCATTCAAGGGCTGGTGGAG+TGG 0.492876 3_3:-2562934 Msa0438260:intron
GGGGCAGAAGCTGATAAATA+CGG 0.493547 3_3:+2560056 None:intergenic
GGAAAGAGAAGAGGCACAGA+AGG 0.521347 3_3:+2570040 None:intergenic
TTCTTCCGATGCTCAACTCA+AGG 0.528643 3_3:-2569940 Msa0438260:CDS
TCCCGTAAGAAGAAAACGTA+GGG 0.534592 3_3:-2569985 Msa0438260:CDS
TCAACTCAAGGAAAATTGGT+TGG 0.534962 3_3:-2569928 Msa0438260:CDS
CTAACCTGCTTCCCATCTTG+TGG 0.564189 3_3:+2566542 None:intergenic
TTGGGTTTGGGAAAGAGAAG+AGG 0.565469 3_3:+2570031 None:intergenic
TTCAAGGGCTGGTGGAGTGG+AGG 0.572446 3_3:-2562931 Msa0438260:intron
TTAGCAATCAAATCATGGAT+AGG 0.579734 3_3:+2560013 None:intergenic
CCAACAAGTAATTGCACATG+AGG 0.580425 3_3:+2567303 None:intergenic
TGATGGTCTCAGTAGGCACT+TGG 0.586457 3_3:+2560105 None:intergenic
CTCTGGAAGCAAGAATGCAA+AGG 0.594171 3_3:-2562815 Msa0438260:intron
CAACAGCACCAGAAACATCT+GGG 0.595584 3_3:+2569802 None:intergenic
CAGCTGGAGCATCAAAACTA+CGG 0.598578 3_3:+2567232 None:intergenic
TTGTCAATGATGGTCTCAGT+AGG 0.600202 3_3:+2560098 None:intergenic
TACTTGTTGGCAAAAGAACA+CGG 0.601344 3_3:-2567290 Msa0438260:CDS
TTCGCTTTCCAAGTAAAAGA+CGG 0.604097 3_3:+2562847 None:intergenic
TTCCAAGTAAAAGACGGCAC+TGG 0.604676 3_3:+2562853 None:intergenic
AAGGATCTGAAAGAAATGAT+GGG 0.611218 3_3:+2570059 None:intergenic
TCATGTTGTAGGAAGAGCAG+AGG 0.614326 3_3:-2560168 Msa0438260:intron
ACTCAGTGACGGAAATAATG+TGG 0.631519 3_3:+2561173 None:intergenic
GATGATGAAAATAAAAGGAG+TGG 0.632908 3_3:+2570180 None:intergenic
CGACTGTTCTATATATGCAG+TGG 0.633149 3_3:+2566574 None:intergenic
ATGATGAAAATAAAAGGAGT+GGG 0.634286 3_3:+2570181 None:intergenic
GAATCTGACATCGAAAATCG+AGG 0.639985 3_3:-2569850 Msa0438260:CDS
AATCTGACATCGAAAATCGA+GGG 0.646404 3_3:-2569849 Msa0438260:CDS
TCATCATTAATACTACACCA+TGG 0.684691 3_3:-2570162 Msa0438260:exon
GTTAACAGGGAACTCAGTGA+CGG 0.688972 3_3:+2561162 None:intergenic
TTCCCGTAAGAAGAAAACGT+AGG 0.701653 3_3:-2569986 Msa0438260:CDS
AAAATGGGTAGAATTTGCTG+GGG 0.704991 3_3:+2569887 None:intergenic
TGGAACAACAGTAAATCCTG+AGG 0.725915 3_3:+2562873 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAAAATATTAAT+AGG - chr3_3:2565202-2565221 Msa0438260:intron 0.0%
!!! ATATTTTATTTTTAAAACCA+AGG - chr3_3:2560875-2560894 Msa0438260:intron 10.0%
!!! AGTTTAAAATAATAAAATCA+AGG + chr3_3:2562713-2562732 None:intergenic 10.0%
!!! ATATTTTATTGATAAATTTC+AGG - chr3_3:2563186-2563205 Msa0438260:intron 10.0%
!! AATATTACAAAAATATTATC+AGG + chr3_3:2568734-2568753 None:intergenic 10.0%
!!! TTAATGATGATGAAAATAAA+AGG + chr3_3:2559954-2559973 None:intergenic 15.0%
!!! TTTTCACAAATAAACTTATT+TGG + chr3_3:2560671-2560690 None:intergenic 15.0%
!! GAAAATTATTAGTAGAAATA+TGG - chr3_3:2560686-2560705 Msa0438260:intron 15.0%
!!! ATTTGTTATGTTTATGAATT+TGG - chr3_3:2561103-2561122 Msa0438260:intron 15.0%
!!! CTTTTAATATACTTTGTAAT+TGG + chr3_3:2561404-2561423 None:intergenic 15.0%
!! ATTATTAAATAGAAACTATC+AGG - chr3_3:2562477-2562496 Msa0438260:intron 15.0%
!! TAACAAAAGAAATAAATACT+AGG + chr3_3:2563006-2563025 None:intergenic 15.0%
!!! ATTTTGCTTTTTAATATACA+AGG - chr3_3:2563475-2563494 Msa0438260:intron 15.0%
!! TATGAATAGATAATTTAAGA+AGG + chr3_3:2563652-2563671 None:intergenic 15.0%
!! ACATTAAACTAGTTAAAAAT+GGG + chr3_3:2564026-2564045 None:intergenic 15.0%
!! TTAAAAATCGTTATGTTTAA+AGG - chr3_3:2566987-2567006 Msa0438260:intron 15.0%
!! TAAAAATCGTTATGTTTAAA+GGG - chr3_3:2566988-2567007 Msa0438260:intron 15.0%
!!! GGAAAAATAACATAATTTTA+TGG + chr3_3:2567032-2567051 None:intergenic 15.0%
!! TTTAAATATCAAACTGAAAA+AGG + chr3_3:2567080-2567099 None:intergenic 15.0%
!! TAATAATAAAACATTACAAG+TGG + chr3_3:2567379-2567398 None:intergenic 15.0%
!! TATTATTATTTCCAAAAACT+TGG - chr3_3:2567391-2567410 Msa0438260:intron 15.0%
!! AAAAACAAAAAAATATATCG+TGG - chr3_3:2568384-2568403 Msa0438260:intron 15.0%
!! AAAACAAAAAAATATATCGT+GGG - chr3_3:2568385-2568404 Msa0438260:intron 15.0%
!!! AATGTGTAAAATGTATTTTT+AGG - chr3_3:2568510-2568529 Msa0438260:intron 15.0%
!!! ACTTCTAGTTATAAAAATTT+TGG - chr3_3:2568630-2568649 Msa0438260:intron 15.0%
!!! CTTCTAGTTATAAAAATTTT+GGG - chr3_3:2568631-2568650 Msa0438260:intron 15.0%
!! TGAACAAAATATATAGTTAA+TGG + chr3_3:2568858-2568877 None:intergenic 15.0%
!! TTAACTAATCCATTTATATA+TGG - chr3_3:2569601-2569620 Msa0438260:intron 15.0%
!! ACATAGTATACAATATAATT+AGG + chr3_3:2570147-2570166 None:intergenic 15.0%
!!! TGGTGTAAATTGTATTTTTA+GGG + chr3_3:2559993-2560012 None:intergenic 20.0%
!! CATTATTATAGATTAAAGAG+CGG + chr3_3:2560634-2560653 None:intergenic 20.0%
!! TCGTAATTGTTATCTATTTA+AGG - chr3_3:2560926-2560945 Msa0438260:intron 20.0%
!!! TTTACAGGTTTTTAAATGAA+TGG - chr3_3:2561059-2561078 Msa0438260:intron 20.0%
!! TTTAAATGAATGGCTATTAA+TGG - chr3_3:2561069-2561088 Msa0438260:intron 20.0%
!!! GTCAAAATTTTGTTAACTAT+GGG - chr3_3:2561167-2561186 Msa0438260:CDS 20.0%
!! GGAATTGTTTATACTTTATA+TGG - chr3_3:2561188-2561207 Msa0438260:CDS 20.0%
!! AAATATATAGGGAAAATAGA+GGG + chr3_3:2561678-2561697 None:intergenic 20.0%
!! AGAATTGAGAGAAATATATA+GGG + chr3_3:2561689-2561708 None:intergenic 20.0%
!! TAGAATTGAGAGAAATATAT+AGG + chr3_3:2561690-2561709 None:intergenic 20.0%
!! ATAAAAAATTACAAATCCAG+TGG + chr3_3:2562028-2562047 None:intergenic 20.0%
!!! CTGGATTTGTAATTTTTTAT+CGG - chr3_3:2562028-2562047 Msa0438260:intron 20.0%
!!! TTTGCTATTTCAATTATAAG+AGG - chr3_3:2562235-2562254 Msa0438260:intron 20.0%
!! AATATGCTTACTAAAGAAAT+GGG + chr3_3:2562516-2562535 None:intergenic 20.0%
!! TAATATGCTTACTAAAGAAA+TGG + chr3_3:2562517-2562536 None:intergenic 20.0%
!! AGTAAGCATATTATGTATTA+TGG - chr3_3:2562524-2562543 Msa0438260:intron 20.0%
!!! TTATTTCTTCAAAAAAATGC+AGG - chr3_3:2562939-2562958 Msa0438260:intron 20.0%
!!! AAATATTGACTTCTTATAGT+AGG + chr3_3:2563267-2563286 None:intergenic 20.0%
!! AAAATTAATATAGCAAACTG+AGG + chr3_3:2563446-2563465 None:intergenic 20.0%
!! ATCTATTCATACTAATTAGT+TGG - chr3_3:2563661-2563680 Msa0438260:intron 20.0%
!! GACATTAAACTAGTTAAAAA+TGG + chr3_3:2564027-2564046 None:intergenic 20.0%
!!! TGATAAATATGCTATTTAAG+AGG + chr3_3:2564049-2564068 None:intergenic 20.0%
!! AAGCAATATAAAACAACAAA+TGG - chr3_3:2564989-2565008 Msa0438260:intron 20.0%
!!! AAAAACTCTCAAATTTTTAG+AGG - chr3_3:2566721-2566740 Msa0438260:intron 20.0%
!! ATTATCTCCTTTATATTTCT+AGG - chr3_3:2566881-2566900 Msa0438260:intron 20.0%
!! AAAATTTCAAGAAATAATCG+TGG + chr3_3:2567516-2567535 None:intergenic 20.0%
!! GAAAAGATGAAAAAAACTAA+TGG + chr3_3:2567593-2567612 None:intergenic 20.0%
!! AAATCACCATAAATATTCAT+TGG - chr3_3:2567781-2567800 Msa0438260:intron 20.0%
!!! AGTTGATATTAGGAAATTAA+TGG - chr3_3:2567966-2567985 Msa0438260:intron 20.0%
!! ATATTAGGAAATTAATGGAA+GGG - chr3_3:2567971-2567990 Msa0438260:intron 20.0%
!!! AACTTCTATTTTTAAAAGGT+AGG + chr3_3:2568042-2568061 None:intergenic 20.0%
!!! GTGTAACTTCTATTTTTAAA+AGG + chr3_3:2568046-2568065 None:intergenic 20.0%
!!! TATTCAAAAGTTAGTTTACT+AGG + chr3_3:2568073-2568092 None:intergenic 20.0%
!!! TGTATTTTCTTTTTAAAGCA+AGG + chr3_3:2568307-2568326 None:intergenic 20.0%
!!! AATACATTTTACACATTTCA+AGG + chr3_3:2568507-2568526 None:intergenic 20.0%
!! ATCTTCAAAATCTATTACAA+GGG - chr3_3:2569065-2569084 Msa0438260:intron 20.0%
!! TAGAATCGTTGAAAATTAAA+TGG + chr3_3:2569156-2569175 None:intergenic 20.0%
!! ATACTTGGTAAAAAAATCAA+CGG + chr3_3:2569309-2569328 None:intergenic 20.0%
!! AAGTTATTTGATGAAATACT+TGG + chr3_3:2569324-2569343 None:intergenic 20.0%
!!! TTAAAATTTGAAGTGAATGA+TGG - chr3_3:2569422-2569441 Msa0438260:intron 20.0%
!!! ATTAGTTAATCTAGAATGTA+TGG + chr3_3:2569590-2569609 None:intergenic 20.0%
!!! TGTTAGTTTCCATATATAAA+TGG + chr3_3:2569613-2569632 None:intergenic 20.0%
!!! TTCTTTTAAAGCATTTAACT+TGG + chr3_3:2569738-2569757 None:intergenic 20.0%
!!! TAATGAATTTTTCATGTTGT+AGG - chr3_3:2569947-2569966 Msa0438260:CDS 20.0%
! ATGATGAAAATAAAAGGAGT+GGG + chr3_3:2559948-2559967 None:intergenic 25.0%
!! CTGGTGTAAATTGTATTTTT+AGG + chr3_3:2559994-2560013 None:intergenic 25.0%
!! AGATAGAGTTTCTTTTTACT+TGG - chr3_3:2560431-2560450 Msa0438260:intron 25.0%
! AATCATCATGCAAAATATCT+TGG + chr3_3:2560837-2560856 None:intergenic 25.0%
!!! TATTTTGCATGATGATTTGT+TGG - chr3_3:2560840-2560859 Msa0438260:intron 25.0%
!!! ATTTTGCATGATGATTTGTT+GGG - chr3_3:2560841-2560860 Msa0438260:intron 25.0%
! ATAGATAACAATTACGAGAT+CGG + chr3_3:2560923-2560942 None:intergenic 25.0%
! ATTATCCTTAACAATTTGGT+CGG + chr3_3:2561008-2561027 None:intergenic 25.0%
! ACCAAATTGTTAAGGATAAT+GGG - chr3_3:2561008-2561027 Msa0438260:intron 25.0%
!! GGTCAAAATTTTGTTAACTA+TGG - chr3_3:2561166-2561185 Msa0438260:CDS 25.0%
! AGAATGTGTTTAGAAAAGTT+TGG + chr3_3:2561301-2561320 None:intergenic 25.0%
!! TTTAACAGGCTGTAAATTTT+CGG - chr3_3:2561343-2561362 Msa0438260:intron 25.0%
! AATAAAACAGAGAAAAACAG+AGG + chr3_3:2561596-2561615 None:intergenic 25.0%
!!! TTTTTCTCTGTTTTATTGCT+TGG - chr3_3:2561599-2561618 Msa0438260:intron 25.0%
! CATAAAAACAGAGATATTAG+AGG + chr3_3:2561638-2561657 None:intergenic 25.0%
!!! AATATCTCTGTTTTTATGCT+TGG - chr3_3:2561640-2561659 Msa0438260:intron 25.0%
! GAAATATATAGGGAAAATAG+AGG + chr3_3:2561679-2561698 None:intergenic 25.0%
! AAATTATGAAACAAGAGGAA+TGG + chr3_3:2561825-2561844 None:intergenic 25.0%
! TCATCAAATTATGAAACAAG+AGG + chr3_3:2561830-2561849 None:intergenic 25.0%
!! AGTTTGGGATAAGATAAATA+AGG - chr3_3:2562190-2562209 Msa0438260:intron 25.0%
!! GTTTGGGATAAGATAAATAA+GGG - chr3_3:2562191-2562210 Msa0438260:intron 25.0%
!! CACATTTTTACGATTATAAG+AGG + chr3_3:2562297-2562316 None:intergenic 25.0%
! TTGAAATAGCAAATGTTAGT+TGG + chr3_3:2562326-2562345 None:intergenic 25.0%
!! ATGACTTGTATTGTTATTGT+TGG - chr3_3:2562393-2562412 Msa0438260:intron 25.0%
!! TGACTTGTATTGTTATTGTT+GGG - chr3_3:2562394-2562413 Msa0438260:intron 25.0%
!! TATCAAAAGATCTTCCTTTT+GGG + chr3_3:2562458-2562477 None:intergenic 25.0%
!! ATATCAAAAGATCTTCCTTT+TGG + chr3_3:2562459-2562478 None:intergenic 25.0%
!! TCTTAGATTTGTTCGTATAA+AGG - chr3_3:2562600-2562619 Msa0438260:intron 25.0%
! TAATAAAATCAAGGAACCTT+GGG + chr3_3:2562704-2562723 None:intergenic 25.0%
! ATAATAAAATCAAGGAACCT+TGG + chr3_3:2562705-2562724 None:intergenic 25.0%
! TAACAAACCTATAATGTGAA+TGG + chr3_3:2563320-2563339 None:intergenic 25.0%
! AAGATTAATAACCTCATTCT+TGG - chr3_3:2563346-2563365 Msa0438260:intron 25.0%
! AGATTAATAACCTCATTCTT+GGG - chr3_3:2563347-2563366 Msa0438260:intron 25.0%
! GTATTTGTGGACAATATTAA+CGG - chr3_3:2563369-2563388 Msa0438260:intron 25.0%
!!! TGCTTTTTAATATACAAGGT+TGG - chr3_3:2563479-2563498 Msa0438260:intron 25.0%
!! AACTGATTCTTGATTTCATT+AGG - chr3_3:2563527-2563546 Msa0438260:intron 25.0%
! TTTATACATGCAGATTCTTT+CGG + chr3_3:2563753-2563772 None:intergenic 25.0%
!!! ATGTTTTCAATTGCTACTTA+AGG + chr3_3:2563808-2563827 None:intergenic 25.0%
!! ATGACTATGTCATTTAGTAT+GGG - chr3_3:2563878-2563897 Msa0438260:intron 25.0%
!! AAAATGGGTTTATTTCATTG+AGG + chr3_3:2564011-2564030 None:intergenic 25.0%
! TCATTTCTTAGATGATGTTA+CGG - chr3_3:2564175-2564194 Msa0438260:intron 25.0%
! ATATATACACACAAAAAGCT+AGG - chr3_3:2564929-2564948 Msa0438260:intron 25.0%
! ATACTTGTCTATAAAAGAAG+CGG - chr3_3:2565102-2565121 Msa0438260:intron 25.0%
! AAAAAAAAACTAAGGCGAAT+AGG + chr3_3:2565191-2565210 None:intergenic 25.0%
!!! TTTTGAGACTGAATATTGAT+TGG - chr3_3:2566692-2566711 Msa0438260:intron 25.0%
! AATTATACAACAGAAACCAA+AGG + chr3_3:2566793-2566812 None:intergenic 25.0%
! TACCAAACCTAGAAATATAA+AGG + chr3_3:2566891-2566910 None:intergenic 25.0%
! TCAAAAAAACAAGGATGAAA+AGG - chr3_3:2566936-2566955 Msa0438260:intron 25.0%
! CAAAAAAACAAGGATGAAAA+GGG - chr3_3:2566937-2566956 Msa0438260:intron 25.0%
! AAAAAAACAAGGATGAAAAG+GGG - chr3_3:2566938-2566957 Msa0438260:intron 25.0%
!!! AAAAGGGGAATTGTTTTAAA+GGG - chr3_3:2566953-2566972 Msa0438260:intron 25.0%
! AACAAACATGCATTTCTTTA+AGG + chr3_3:2567053-2567072 None:intergenic 25.0%
! AAGAAAAAACATTATGCTTG+TGG - chr3_3:2567451-2567470 Msa0438260:intron 25.0%
! TAAACATCTTAGGTAATGTT+TGG + chr3_3:2567836-2567855 None:intergenic 25.0%
! ACAATATGAGTAAACATCTT+AGG + chr3_3:2567846-2567865 None:intergenic 25.0%
! TAAGATGTTTACTCATATTG+TGG - chr3_3:2567845-2567864 Msa0438260:intron 25.0%
! GAACGAACAAAATAGTATTA+AGG + chr3_3:2567911-2567930 None:intergenic 25.0%
!!! TGCAATTGAAAGTTGATATT+AGG - chr3_3:2567956-2567975 Msa0438260:intron 25.0%
! GATATTAGGAAATTAATGGA+AGG - chr3_3:2567970-2567989 Msa0438260:intron 25.0%
!! ACTTTTGAATATTGTTACAG+TGG - chr3_3:2568082-2568101 Msa0438260:intron 25.0%
!!! AACATGCATATTTGAGATTT+TGG + chr3_3:2568211-2568230 None:intergenic 25.0%
! GAGTATCAAACAATGTTTAT+AGG - chr3_3:2568532-2568551 Msa0438260:intron 25.0%
!!! AATCTTGGATTTTTTGTGTT+TGG + chr3_3:2568761-2568780 None:intergenic 25.0%
! CATCTTCAAAATCTATTACA+AGG - chr3_3:2569064-2569083 Msa0438260:intron 25.0%
! TCTTCAAAATCTATTACAAG+GGG - chr3_3:2569066-2569085 Msa0438260:intron 25.0%
! AAAAGCAACGTAAAATTTCT+AGG + chr3_3:2569116-2569135 None:intergenic 25.0%
! TGGAGAAATTAAGTGTTATA+AGG + chr3_3:2569570-2569589 None:intergenic 25.0%
! ATTTGTAACCAAGCATTATA+GGG + chr3_3:2569643-2569662 None:intergenic 25.0%
! TATTTGTAACCAAGCATTAT+AGG + chr3_3:2569644-2569663 None:intergenic 25.0%
!! TGATAAATACGGAAATTTTC+AGG + chr3_3:2570062-2570081 None:intergenic 25.0%
!! TAGGTTGAAAAATAGAAGTA+GGG + chr3_3:2570097-2570116 None:intergenic 25.0%
!! ATAGGTTGAAAAATAGAAGT+AGG + chr3_3:2570098-2570117 None:intergenic 25.0%
! TACAATTAGCAATCAAATCA+TGG + chr3_3:2570121-2570140 None:intergenic 25.0%
GATGATGAAAATAAAAGGAG+TGG + chr3_3:2559949-2559968 None:intergenic 30.0%
TCATCATTAATACTACACCA+TGG - chr3_3:2559964-2559983 Msa0438260:three_prime_UTR 30.0%
!!! TTGTATTTTTAGGGATTCCA+TGG + chr3_3:2559984-2560003 None:intergenic 30.0%
! TTTGTTCATGAAATGGGTTT+GGG + chr3_3:2560029-2560048 None:intergenic 30.0%
! AGAGAGTTTGTTCATGAAAT+GGG + chr3_3:2560035-2560054 None:intergenic 30.0%
! AAGAGAGTTTGTTCATGAAA+TGG + chr3_3:2560036-2560055 None:intergenic 30.0%
AAGGATCTGAAAGAAATGAT+GGG + chr3_3:2560070-2560089 None:intergenic 30.0%
! AACTATGATTTCAGGGTTTT+GGG + chr3_3:2560122-2560141 None:intergenic 30.0%
! AAAAATGGGTAGAATTTGCT+GGG + chr3_3:2560243-2560262 None:intergenic 30.0%
AAAAAATGGGTAGAATTTGC+TGG + chr3_3:2560244-2560263 None:intergenic 30.0%
AACTTCATCCAAAAGAAGTA+TGG + chr3_3:2560395-2560414 None:intergenic 30.0%
! AGAGTTTCTTTTTACTTGGT+AGG - chr3_3:2560435-2560454 Msa0438260:intron 30.0%
! GAGTTTCTTTTTACTTGGTA+GGG - chr3_3:2560436-2560455 Msa0438260:intron 30.0%
!!! AACTTCTTTTGGCTTCAATT+GGG + chr3_3:2560488-2560507 None:intergenic 30.0%
!!! TAACTTCTTTTGGCTTCAAT+TGG + chr3_3:2560489-2560508 None:intergenic 30.0%
AATTGAAGCCAAAAGAAGTT+AGG - chr3_3:2560488-2560507 Msa0438260:intron 30.0%
!!! TTTTGCATGATGATTTGTTG+GGG - chr3_3:2560842-2560861 Msa0438260:intron 30.0%
TTATCCTTAACAATTTGGTC+GGG + chr3_3:2561007-2561026 None:intergenic 30.0%
GACCAAATTGTTAAGGATAA+TGG - chr3_3:2561007-2561026 Msa0438260:intron 30.0%
CCAAATTGTTAAGGATAATG+GGG - chr3_3:2561009-2561028 Msa0438260:intron 30.0%
! ATGGCTATTAATGGATATGA+TGG - chr3_3:2561078-2561097 Msa0438260:intron 30.0%
TATGAATTTGGATCGAGATT+TGG - chr3_3:2561115-2561134 Msa0438260:intron 30.0%
!! TTATATGGCAGTGTTGTTTA+CGG - chr3_3:2561203-2561222 Msa0438260:intron 30.0%
!! CTGTATACATTTTGTTATGC+TGG - chr3_3:2561246-2561265 Msa0438260:intron 30.0%
GGTGAAAAAGTCAATTTAAC+AGG - chr3_3:2561329-2561348 Msa0438260:intron 30.0%
AGATATTAGAGGAAAAACAG+AGG + chr3_3:2561627-2561646 None:intergenic 30.0%
ATATAGCATAACACGACATA+TGG + chr3_3:2561926-2561945 None:intergenic 30.0%
ATAAATATATCCTTCCTCGA+TGG + chr3_3:2561973-2561992 None:intergenic 30.0%
CGAAATAATTGAGATCCATT+TGG - chr3_3:2561998-2562017 Msa0438260:intron 30.0%
! ATAAAGCGTCAATCACATTA+AGG - chr3_3:2562109-2562128 Msa0438260:intron 30.0%
AATTTACAGTAGCATGACAA+TGG - chr3_3:2562552-2562571 Msa0438260:intron 30.0%
TCGTATAAAGGAATGAAATC+TGG - chr3_3:2562612-2562631 Msa0438260:intron 30.0%
AATAAAATCAAGGAACCTTG+GGG + chr3_3:2562703-2562722 None:intergenic 30.0%
TATATTAGTCCAACATACAC+AGG - chr3_3:2562789-2562808 Msa0438260:intron 30.0%
GATCAACTGAACAATAGAAT+TGG + chr3_3:2562875-2562894 None:intergenic 30.0%
! GATGACTATGTCATTTAGTA+TGG - chr3_3:2563877-2563896 Msa0438260:intron 30.0%
!! AAGTTATAAGGTGACTTGTT+GGG - chr3_3:2563909-2563928 Msa0438260:intron 30.0%
ACAAGAAAGGGTTTAAAAGT+TGG + chr3_3:2564114-2564133 None:intergenic 30.0%
CCAGACATAAAAACAAGAAA+GGG + chr3_3:2564126-2564145 None:intergenic 30.0%
TCCAGACATAAAAACAAGAA+AGG + chr3_3:2564127-2564146 None:intergenic 30.0%
ATTATTCTTCCCATCATGAT+TGG - chr3_3:2564297-2564316 Msa0438260:intron 30.0%
!!! GTATTTTCAAGTGATTGCAA+CGG - chr3_3:2564386-2564405 Msa0438260:intron 30.0%
TGACACCATGTATTGAAATT+TGG - chr3_3:2564552-2564571 Msa0438260:intron 30.0%
GACACCATGTATTGAAATTT+GGG - chr3_3:2564553-2564572 Msa0438260:intron 30.0%
ACACCATGTATTGAAATTTG+GGG - chr3_3:2564554-2564573 Msa0438260:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG + chr3_3:2564625-2564644 None:intergenic 30.0%
!! AGAGTCTTATTTATCCGATT+TGG - chr3_3:2564643-2564662 Msa0438260:intron 30.0%
!! GAGTCTTATTTATCCGATTT+GGG - chr3_3:2564644-2564663 Msa0438260:intron 30.0%
!! AAACTTTATTCGAGTTGTCT+CGG + chr3_3:2564761-2564780 None:intergenic 30.0%
GGTAATTAGTTCATTGAACT+TGG - chr3_3:2564793-2564812 Msa0438260:intron 30.0%
! CTTAATCTTTAGCTCAAGTT+CGG + chr3_3:2564836-2564855 None:intergenic 30.0%
! TATATATAGTTCGACTCGTT+TGG - chr3_3:2564885-2564904 Msa0438260:intron 30.0%
!!! ACTTTTTTTTTGTCCCACAT+CGG - chr3_3:2565056-2565075 Msa0438260:intron 30.0%
TTTGCTACTCTTTGATATCA+AGG - chr3_3:2565126-2565145 Msa0438260:intron 30.0%
ATTATTTCACGGTTGTGAAA+TGG - chr3_3:2565159-2565178 Msa0438260:intron 30.0%
AAATTCCGCCTTAATTATTG+CGG + chr3_3:2565486-2565505 None:intergenic 30.0%
AAATTCCGCCTTAATTATTG+CGG + chr3_3:2565486-2565505 None:intergenic 30.0%
ATCCTAGATCATCTATTGTT+GGG + chr3_3:2566326-2566345 None:intergenic 30.0%
TATCCTAGATCATCTATTGT+TGG + chr3_3:2566327-2566346 None:intergenic 30.0%
! ATAGATAGATGATCTAGGAT+AGG - chr3_3:2566344-2566363 Msa0438260:intron 30.0%
TCTGATACCATGTTGAAATT+TGG - chr3_3:2566368-2566387 Msa0438260:intron 30.0%
CTGATACCATGTTGAAATTT+GGG - chr3_3:2566369-2566388 Msa0438260:intron 30.0%
TGATACCATGTTGAAATTTG+GGG - chr3_3:2566370-2566389 Msa0438260:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG + chr3_3:2564625-2564644 None:intergenic 30.0%
! TCCTGTTGTAATCGAAATTT+TGG - chr3_3:2566827-2566846 Msa0438260:intron 30.0%
!! CTCCTTTATATTTCTAGGTT+TGG - chr3_3:2566886-2566905 Msa0438260:intron 30.0%
!!! ATCCTTGTTTTTTTGAAGTC+TGG + chr3_3:2566932-2566951 None:intergenic 30.0%
!!! GAAAAGGGGAATTGTTTTAA+AGG - chr3_3:2566952-2566971 Msa0438260:intron 30.0%
! GCTGATTATTTCCAAGTTTT+TGG + chr3_3:2567405-2567424 None:intergenic 30.0%
! TTTCTTGAAATTTTCCACCA+TGG - chr3_3:2567522-2567541 Msa0438260:intron 30.0%
!!! CAAAGGCTTTTCAAGTTTAA+TGG + chr3_3:2567615-2567634 None:intergenic 30.0%
!! TCTAATGTTTGGTTTGTGAA+AGG + chr3_3:2567670-2567689 None:intergenic 30.0%
AACCAAACATTAGATTCCTA+TGG - chr3_3:2567676-2567695 Msa0438260:intron 30.0%
TTCCATAGGAATCTAATGTT+TGG + chr3_3:2567681-2567700 None:intergenic 30.0%
ACATACACTTAAGATTCCAT+AGG + chr3_3:2567695-2567714 None:intergenic 30.0%
GTTCATCCGAATTTATGATT+TGG - chr3_3:2567748-2567767 Msa0438260:intron 30.0%
ACAGCTCCAAATCATAAATT+CGG + chr3_3:2567757-2567776 None:intergenic 30.0%
CGCATTCCAATGAATATTTA+TGG + chr3_3:2567790-2567809 None:intergenic 30.0%
ACTTTCAATTGCAATTCCAA+TGG + chr3_3:2567949-2567968 None:intergenic 30.0%
! CAACACAAGCATAACTATTT+TGG + chr3_3:2568280-2568299 None:intergenic 30.0%
GAATCTGAATTTCAGAATCT+TGG + chr3_3:2568776-2568795 None:intergenic 30.0%
!!! ATCTTTTTTCCTGGTTAACA+GGG + chr3_3:2568980-2568999 None:intergenic 30.0%
TTAACCAGGAAAAAAGATCA+TGG - chr3_3:2568982-2569001 Msa0438260:intron 30.0%
!!! CTTAAAATTTTGGTTGAGGT+GGG + chr3_3:2569219-2569238 None:intergenic 30.0%
! GTCATTCCAGCTTAAAATTT+TGG + chr3_3:2569229-2569248 None:intergenic 30.0%
ATAATACTTTACCATGCTGT+TGG + chr3_3:2569546-2569565 None:intergenic 30.0%
TTTGTAACCAAGCATTATAG+GGG + chr3_3:2569642-2569661 None:intergenic 30.0%
ATGATTATGCTACAACCAAA+TGG - chr3_3:2569665-2569684 Msa0438260:intron 30.0%
!!! TTTGTTTTAGAGGTACCATT+TGG + chr3_3:2569683-2569702 None:intergenic 30.0%
!!! TGACAGTGTTTTTGTTTTAG+AGG + chr3_3:2569693-2569712 None:intergenic 30.0%
TTCAAAAGACTCATTGCTAA+TGG - chr3_3:2569842-2569861 Msa0438260:CDS 30.0%
! GCTTTATTAATTGCTGCATA+TGG - chr3_3:2569980-2569999 Msa0438260:CDS 30.0%
TTGAAAAATAGAAGTAGGGA+GGG + chr3_3:2570093-2570112 None:intergenic 30.0%
TTAGCAATCAAATCATGGAT+AGG + chr3_3:2570116-2570135 None:intergenic 30.0%
! GTTTGTTCATGAAATGGGTT+TGG + chr3_3:2560030-2560049 None:intergenic 35.0%
!! AGAAATGATGGGTTTGAGTT+TGG + chr3_3:2560059-2560078 None:intergenic 35.0%
GAAGGATCTGAAAGAAATGA+TGG + chr3_3:2560071-2560090 None:intergenic 35.0%
! GAACTATGATTTCAGGGTTT+TGG + chr3_3:2560123-2560142 None:intergenic 35.0%
TTACGGGAACTATGATTTCA+GGG + chr3_3:2560129-2560148 None:intergenic 35.0%
! AACCCTACGTTTTCTTCTTA+CGG + chr3_3:2560146-2560165 None:intergenic 35.0%
!!! ATTTTCCTTGAGTTGAGCAT+CGG + chr3_3:2560194-2560213 None:intergenic 35.0%
ATGCTCAACTCAAGGAAAAT+TGG - chr3_3:2560194-2560213 Msa0438260:intron 35.0%
TCAACTCAAGGAAAATTGGT+TGG - chr3_3:2560198-2560217 Msa0438260:intron 35.0%
!! AAAATGGGTAGAATTTGCTG+GGG + chr3_3:2560242-2560261 None:intergenic 35.0%
! CTGGTCTTCACTCAAAAAAT+GGG + chr3_3:2560257-2560276 None:intergenic 35.0%
! TCTGGTCTTCACTCAAAAAA+TGG + chr3_3:2560258-2560277 None:intergenic 35.0%
AATCTGACATCGAAAATCGA+GGG - chr3_3:2560277-2560296 Msa0438260:intron 35.0%
GATGAAGTTCTTTGCTTAGA+TGG - chr3_3:2560406-2560425 Msa0438260:intron 35.0%
! AGAGTCTACCTAACTTCTTT+TGG + chr3_3:2560499-2560518 None:intergenic 35.0%
AAAAGAAGTTAGGTAGACTC+TGG - chr3_3:2560498-2560517 Msa0438260:intron 35.0%
!! CACTTAAAAAAAGAGCATCC+CGG - chr3_3:2560722-2560741 Msa0438260:intron 35.0%
CGTAATACACCAAAAATGGT+GGG + chr3_3:2560787-2560806 None:intergenic 35.0%
TATCCTTAACAATTTGGTCG+GGG + chr3_3:2561006-2561025 None:intergenic 35.0%
CCCCATTATCCTTAACAATT+TGG + chr3_3:2561012-2561031 None:intergenic 35.0%
! TGTTTTCGAATGTACTGAGA+TGG - chr3_3:2561034-2561053 Msa0438260:intron 35.0%
CTAAACACATTCTTCGTTAG+TGG - chr3_3:2561308-2561327 Msa0438260:intron 35.0%
GGGAAAATGGTAAAAAACAG+AGG + chr3_3:2561545-2561564 None:intergenic 35.0%
GAAAAACGGCAAAAAACAGA+GGG + chr3_3:2561565-2561584 None:intergenic 35.0%
GATGGAACTTACAATTGAAC+AGG + chr3_3:2561955-2561974 None:intergenic 35.0%
TTCAATTGTAAGTTCCATCG+AGG - chr3_3:2561956-2561975 Msa0438260:intron 35.0%
TGGATCTCAATTATTTCGCT+TGG + chr3_3:2561996-2562015 None:intergenic 35.0%
AATATCTACCGCATTTGTGT+AGG - chr3_3:2562064-2562083 Msa0438260:intron 35.0%
TGTAGGATCCTAGAAAGTTT+GGG - chr3_3:2562081-2562100 Msa0438260:intron 35.0%
AAAGGAATGAAATCTGGATG+AGG - chr3_3:2562618-2562637 Msa0438260:intron 35.0%
AGTCAAATACCTGTGTATGT+TGG + chr3_3:2562801-2562820 None:intergenic 35.0%
! TACTTGTTGGCAAAAGAACA+CGG - chr3_3:2562836-2562855 Msa0438260:CDS 35.0%
AGAAAAGATAGTATACCAGC+TGG + chr3_3:2562913-2562932 None:intergenic 35.0%
TCTCAATATACTATAGCCAC+GGG + chr3_3:2563101-2563120 None:intergenic 35.0%
CTCTCAATATACTATAGCCA+CGG + chr3_3:2563102-2563121 None:intergenic 35.0%
TTACAGGAAATCAAGTCAGA+AGG + chr3_3:2563135-2563154 None:intergenic 35.0%
TTCCTGTAAGAATCTTAGTC+TGG - chr3_3:2563146-2563165 Msa0438260:intron 35.0%
AACCAGACTAAGATTCTTAC+AGG + chr3_3:2563151-2563170 None:intergenic 35.0%
! GATAGTGCCATTCACATTAT+AGG - chr3_3:2563310-2563329 Msa0438260:intron 35.0%
CTGATGTAACTTAACACCTT+AGG - chr3_3:2563404-2563423 Msa0438260:intron 35.0%
ATACTAATTAGTTGGTCAGC+CGG - chr3_3:2563669-2563688 Msa0438260:intron 35.0%
CATTTGAATTATGTCACGAC+CGG + chr3_3:2563691-2563710 None:intergenic 35.0%
! GAAGTTATAAGGTGACTTGT+TGG - chr3_3:2563908-2563927 Msa0438260:intron 35.0%
TTATCATGTGATATCCGAAG+CGG - chr3_3:2564063-2564082 Msa0438260:intron 35.0%
!!! CCCTTTCTTGTTTTTATGTC+TGG - chr3_3:2564123-2564142 Msa0438260:intron 35.0%
TCGACAAAAAAAAGTCGCAT+AGG - chr3_3:2564198-2564217 Msa0438260:intron 35.0%
ATGCTCTGGTATAAGTATCA+TGG + chr3_3:2564260-2564279 None:intergenic 35.0%
GATGGGAAGAATAATCAACA+TGG + chr3_3:2564292-2564311 None:intergenic 35.0%
CCAGTAAAACCAATCATGAT+GGG + chr3_3:2564309-2564328 None:intergenic 35.0%
ACCAGTAAAACCAATCATGA+TGG + chr3_3:2564310-2564329 None:intergenic 35.0%
!!! TCATGATTGGTTTTACTGGT+TGG - chr3_3:2564310-2564329 Msa0438260:intron 35.0%
ACCATATCCAACTACTGATA+GGG + chr3_3:2564341-2564360 None:intergenic 35.0%
GTGTTCTGTTACTGTTAAGA+GGG - chr3_3:2564435-2564454 Msa0438260:intron 35.0%
!! CAGTTTTGTAAGGATGAGTT+AGG + chr3_3:2564580-2564599 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+TGG - chr3_3:2564578-2564597 Msa0438260:intron 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + chr3_3:2564622-2564641 None:intergenic 35.0%
CTAACCAAAGGTCACAATTA+GGG - chr3_3:2564724-2564743 Msa0438260:intron 35.0%
GAGACAACTCGAATAAAGTT+TGG - chr3_3:2564760-2564779 Msa0438260:intron 35.0%
! ATAAAGTTTGGAACTCGACT+CGG - chr3_3:2564772-2564791 Msa0438260:intron 35.0%
AATATTTGCTTGTAGTGCCA+TGG - chr3_3:2565013-2565032 Msa0438260:intron 35.0%
CTACTCTTTGATATCAAGGT+GGG - chr3_3:2565130-2565149 Msa0438260:intron 35.0%
! TTTAAAGTTCACGAGCAACT+CGG + chr3_3:2565309-2565328 None:intergenic 35.0%
CTAACCAAAGGTCACAATTA+AGG - chr3_3:2564724-2564743 Msa0438260:intron 35.0%
CTAGGATAGATAGATGATCT+AGG - chr3_3:2566339-2566358 Msa0438260:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr3_3:2564578-2564597 Msa0438260:intron 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + chr3_3:2564622-2564641 None:intergenic 35.0%
AGAGTCATATTTATCCGATG+TGG - chr3_3:2566459-2566478 Msa0438260:intron 35.0%
GAGTCATATTTATCCGATGT+GGG - chr3_3:2566460-2566479 Msa0438260:intron 35.0%
CTAACCAAAGGTCACAATTA+AGG - chr3_3:2564724-2564743 Msa0438260:intron 35.0%
TGGAAATTTCGCCTTAATTG+CGG + chr3_3:2566580-2566599 None:intergenic 35.0%
TTTCCAACACCATGCTTATA+TGG - chr3_3:2566594-2566613 Msa0438260:intron 35.0%
AACTGAAGACCATATAAGCA+TGG + chr3_3:2566606-2566625 None:intergenic 35.0%
ACCTCTTATCAGTATGAAAG+TGG - chr3_3:2566645-2566664 Msa0438260:intron 35.0%
TCCACTTTCATACTGATAAG+AGG + chr3_3:2566649-2566668 None:intergenic 35.0%
CTTATCAGTATGAAAGTGGA+AGG - chr3_3:2566649-2566668 Msa0438260:intron 35.0%
! GACTGAATATTGATTGGAAG+AGG - chr3_3:2566698-2566717 Msa0438260:intron 35.0%
!! ACCAAGACTTTAGAATTTCG+TGG - chr3_3:2566750-2566769 Msa0438260:intron 35.0%
!! TCCACGAAATTCTAAAGTCT+TGG + chr3_3:2566754-2566773 None:intergenic 35.0%
!! GACTTTAGAATTTCGTGGAT+AGG - chr3_3:2566755-2566774 Msa0438260:intron 35.0%
CAACAGAAACCAAAGGAAAT+AGG + chr3_3:2566786-2566805 None:intergenic 35.0%
GCCAAAATTTCGATTACAAC+AGG + chr3_3:2566831-2566850 None:intergenic 35.0%
ATCAAACAATTCTAGTGTCG+TGG + chr3_3:2566853-2566872 None:intergenic 35.0%
GTCCAGACTTCAAAAAAACA+AGG - chr3_3:2566927-2566946 Msa0438260:intron 35.0%
TTCGCTTTCCAAGTAAAAGA+CGG + chr3_3:2567282-2567301 None:intergenic 35.0%
!! AAGAATGCAAAGGTTGGTTT+GGG - chr3_3:2567321-2567340 Msa0438260:intron 35.0%
! ATGCCTTTTTATGCTTCCTA+GGG + chr3_3:2567567-2567586 None:intergenic 35.0%
! AATGCCTTTTTATGCTTCCT+AGG + chr3_3:2567568-2567587 None:intergenic 35.0%
AGAAGGAAACAACAACACAA+AGG + chr3_3:2567632-2567651 None:intergenic 35.0%
!! TGTGTTGTTGTTTCCTTCTT+TGG - chr3_3:2567633-2567652 Msa0438260:intron 35.0%
! GAATTTATGATTTGGAGCTG+TGG - chr3_3:2567756-2567775 Msa0438260:intron 35.0%
TCAATTGCAATTCCAATGGA+AGG + chr3_3:2567945-2567964 None:intergenic 35.0%
TGATTCATGACATGAACCAA+GGG + chr3_3:2568000-2568019 None:intergenic 35.0%
ATGATTCATGACATGAACCA+AGG + chr3_3:2568001-2568020 None:intergenic 35.0%
!! TGGTCTTGAGATTTTGAAAG+AGG - chr3_3:2568150-2568169 Msa0438260:intron 35.0%
!! TTTGGTAGTTCTAGCAGTAA+TGG + chr3_3:2568193-2568212 None:intergenic 35.0%
! CAAAAGGTCAAATAGGTTGA+GGG + chr3_3:2568243-2568262 None:intergenic 35.0%
! CTCAACCTATTTGACCTTTT+GGG - chr3_3:2568242-2568261 Msa0438260:intron 35.0%
! TCAACCTATTTGACCTTTTG+GGG - chr3_3:2568243-2568262 Msa0438260:intron 35.0%
! AATCATGTCTTCTGAGAATC+TGG - chr3_3:2568478-2568497 Msa0438260:intron 35.0%
CCTGCAGTAAAAGAAAAAAC+AGG + chr3_3:2568912-2568931 None:intergenic 35.0%
!!! CCTGTTTTTTCTTTTACTGC+AGG - chr3_3:2568909-2568928 Msa0438260:intron 35.0%
!!! GATCTTTTTTCCTGGTTAAC+AGG + chr3_3:2568981-2569000 None:intergenic 35.0%
!!! TGTACCATGATCTTTTTTCC+TGG + chr3_3:2568989-2569008 None:intergenic 35.0%
TATTACAAGGGGAATGCTTA+TGG - chr3_3:2569077-2569096 Msa0438260:intron 35.0%
!!! GCTTAAAATTTTGGTTGAGG+TGG + chr3_3:2569220-2569239 None:intergenic 35.0%
!!! CCAGCTTAAAATTTTGGTTG+AGG + chr3_3:2569223-2569242 None:intergenic 35.0%
! CCTCAACCAAAATTTTAAGC+TGG - chr3_3:2569220-2569239 Msa0438260:intron 35.0%
AGAGTTACTTCTTAAGCAAG+TGG + chr3_3:2569259-2569278 None:intergenic 35.0%
ATAGAAGCCTTCACCATATA+TGG - chr3_3:2569453-2569472 Msa0438260:intron 35.0%
TAGAAGCCTTCACCATATAT+GGG - chr3_3:2569454-2569473 Msa0438260:intron 35.0%
ATGTATTCCCCTATAATGCT+TGG - chr3_3:2569632-2569651 Msa0438260:intron 35.0%
AAAACAAAAACACTGTCACC+TGG - chr3_3:2569695-2569714 Msa0438260:intron 35.0%
!! CATCCATTTGCTGTATTTGT+AGG - chr3_3:2569881-2569900 Msa0438260:CDS 35.0%
GAACCTACAAATACAGCAAA+TGG + chr3_3:2569887-2569906 None:intergenic 35.0%
AAACGTGTGTAGTAATGAAC+AGG + chr3_3:2569909-2569928 None:intergenic 35.0%
TGAGACCATCATTGACAAAT+TGG - chr3_3:2570033-2570052 Msa0438260:CDS 35.0%
GGTTTCCAATTTGTCAATGA+TGG + chr3_3:2570041-2570060 None:intergenic 35.0%
TGAAAAATAGAAGTAGGGAG+GGG + chr3_3:2570092-2570111 None:intergenic 35.0%
GTTGAAAAATAGAAGTAGGG+AGG + chr3_3:2570094-2570113 None:intergenic 35.0%
!! GTTTGGGTTTGGTGAAATTC+TGG + chr3_3:2560013-2560032 None:intergenic 40.0%
! TCATGAAATGGGTTTGGGTT+TGG + chr3_3:2560024-2560043 None:intergenic 40.0%
!!! GATTTCAGGGTTTTGGGTTT+GGG + chr3_3:2560116-2560135 None:intergenic 40.0%
!!! TGATTTCAGGGTTTTGGGTT+TGG + chr3_3:2560117-2560136 None:intergenic 40.0%
CTTACGGGAACTATGATTTC+AGG + chr3_3:2560130-2560149 None:intergenic 40.0%
TTCCCGTAAGAAGAAAACGT+AGG - chr3_3:2560140-2560159 Msa0438260:CDS 40.0%
TCCCGTAAGAAGAAAACGTA+GGG - chr3_3:2560141-2560160 Msa0438260:CDS 40.0%
! ACCCTACGTTTTCTTCTTAC+GGG + chr3_3:2560145-2560164 None:intergenic 40.0%
! CGATTTTCGATGTCAGATTC+TGG + chr3_3:2560276-2560295 None:intergenic 40.0%
GAATCTGACATCGAAAATCG+AGG - chr3_3:2560276-2560295 Msa0438260:intron 40.0%
! GGTATGCACCATACTTCTTT+TGG - chr3_3:2560384-2560403 Msa0438260:intron 40.0%
TAATATCACCGTCCAGTGAT+GGG - chr3_3:2560461-2560480 Msa0438260:intron 40.0%
GCGTAATACACCAAAAATGG+TGG + chr3_3:2560788-2560807 None:intergenic 40.0%
GCTGCGTAATACACCAAAAA+TGG + chr3_3:2560791-2560810 None:intergenic 40.0%
TTGGAAACAGCCTCTTATGT+GGG + chr3_3:2560818-2560837 None:intergenic 40.0%
GGATTCAATCAGTAACTGAC+TGG + chr3_3:2560984-2561003 None:intergenic 40.0%
ATCCTTAACAATTTGGTCGG+GGG + chr3_3:2561005-2561024 None:intergenic 40.0%
TGTACTGAGATGGTGTTTAC+AGG - chr3_3:2561044-2561063 Msa0438260:intron 40.0%
!!! TTTGGCTGTTTTGGCATGTA+AGG - chr3_3:2561133-2561152 Msa0438260:intron 40.0%
GGCATGTAAGGATTGTAGTT+TGG - chr3_3:2561145-2561164 Msa0438260:CDS 40.0%
! AAAAGAGTGTGTCACTACCA+AGG - chr3_3:2561419-2561438 Msa0438260:intron 40.0%
GGCAAAAAACAGAGGGAAAA+TGG + chr3_3:2561558-2561577 None:intergenic 40.0%
GGAAAAACGGCAAAAAACAG+AGG + chr3_3:2561566-2561585 None:intergenic 40.0%
CAGAGGAAACAGAGGAAAAA+CGG + chr3_3:2561579-2561598 None:intergenic 40.0%
GAGAAAAACAGAGGAAACAG+AGG + chr3_3:2561587-2561606 None:intergenic 40.0%
TGATTGTGCCTTTGCATATG+TGG - chr3_3:2561892-2561911 Msa0438260:intron 40.0%
CCAAGAAACCACATATGCAA+AGG + chr3_3:2561903-2561922 None:intergenic 40.0%
CCTTTGCATATGTGGTTTCT+TGG - chr3_3:2561900-2561919 Msa0438260:intron 40.0%
ATTGTAAGTTCCATCGAGGA+AGG - chr3_3:2561960-2561979 Msa0438260:intron 40.0%
!! AAATCCAGTGGACTACCAAA+TGG + chr3_3:2562016-2562035 None:intergenic 40.0%
! TCTAGGATCCTACACAAATG+CGG + chr3_3:2562075-2562094 None:intergenic 40.0%
GTGTAGGATCCTAGAAAGTT+TGG - chr3_3:2562080-2562099 Msa0438260:intron 40.0%
TATGCCTACCCAAACTTTCT+AGG + chr3_3:2562092-2562111 None:intergenic 40.0%
TAGATTGCCTGTTGCAGTTT+GGG - chr3_3:2562175-2562194 Msa0438260:intron 40.0%
ATCTTATCCCAAACTGCAAC+AGG + chr3_3:2562185-2562204 None:intergenic 40.0%
! GAGGCTTTTCTGTGTTATGT+TGG - chr3_3:2562352-2562371 Msa0438260:intron 40.0%
AGTTTGACATTAGATCCCCA+AGG - chr3_3:2562685-2562704 Msa0438260:intron 40.0%
CCAACAAGTAATTGCACATG+AGG + chr3_3:2562826-2562845 None:intergenic 40.0%
CCTCATGTGCAATTACTTGT+TGG - chr3_3:2562823-2562842 Msa0438260:CDS 40.0%
CGTGGCTATAGTATATTGAG+AGG - chr3_3:2563100-2563119 Msa0438260:intron 40.0%
ACCTCATTCTTGGGTATTTG+TGG - chr3_3:2563356-2563375 Msa0438260:intron 40.0%
TCCACAAATACCCAAGAATG+AGG + chr3_3:2563360-2563379 None:intergenic 40.0%
ACTTGTGAAAGACAAGCCTA+AGG + chr3_3:2563423-2563442 None:intergenic 40.0%
TACAAGGTTGGCACTGTTTA+TGG - chr3_3:2563491-2563510 Msa0438260:intron 40.0%
CGACTGTTCTATATATGCAG+TGG + chr3_3:2563555-2563574 None:intergenic 40.0%
! AGAGTTTTCTTTCGGACAGT+GGG + chr3_3:2563729-2563748 None:intergenic 40.0%
! CTTTCGGCAGAGTTTTCTTT+CGG + chr3_3:2563737-2563756 None:intergenic 40.0%
AGGAATATGTGTCAGTCAAG+CGG + chr3_3:2563788-2563807 None:intergenic 40.0%
GTCATTTAGTATGGGCACTA+TGG - chr3_3:2563886-2563905 Msa0438260:intron 40.0%
TGGGCACTATGGAAGTTATA+AGG - chr3_3:2563897-2563916 Msa0438260:intron 40.0%
CACTGGACATCAGAGATTAT+TGG + chr3_3:2563948-2563967 None:intergenic 40.0%
TAATCTCTGATGTCCAGTGT+TGG - chr3_3:2563949-2563968 Msa0438260:intron 40.0%
TTTGTACCAATAGACCGCTT+CGG + chr3_3:2564080-2564099 None:intergenic 40.0%
TGACGTGACAGCTAACATTA+GGG + chr3_3:2564158-2564177 None:intergenic 40.0%
ATGACGTGACAGCTAACATT+AGG + chr3_3:2564159-2564178 None:intergenic 40.0%
ACAGTTGTAGATTGCACAGT+GGG + chr3_3:2564235-2564254 None:intergenic 40.0%
CATGGCATATAGATATGCTC+TGG + chr3_3:2564274-2564293 None:intergenic 40.0%
!!! CCCATCATGATTGGTTTTAC+TGG - chr3_3:2564306-2564325 Msa0438260:intron 40.0%
TCCCTATCAGTAGTTGGATA+TGG - chr3_3:2564337-2564356 Msa0438260:intron 40.0%
CACCATATCCAACTACTGAT+AGG + chr3_3:2564342-2564361 None:intergenic 40.0%
CTATCAGTAGTTGGATATGG+TGG - chr3_3:2564340-2564359 Msa0438260:intron 40.0%
TGGTGTGAGAAGGAGATAAT+GGG - chr3_3:2564360-2564379 Msa0438260:intron 40.0%
GGTGTTCTGTTACTGTTAAG+AGG - chr3_3:2564434-2564453 Msa0438260:intron 40.0%
TTCTGTTACTGTTAAGAGGG+TGG - chr3_3:2564438-2564457 Msa0438260:intron 40.0%
TCTGTTACTGTTAAGAGGGT+GGG - chr3_3:2564439-2564458 Msa0438260:intron 40.0%
!! AAAGAGAGGGTGTTAGGTTA+GGG - chr3_3:2564488-2564507 Msa0438260:intron 40.0%
AGGCCCCAAATTTCAATACA+TGG + chr3_3:2564560-2564579 None:intergenic 40.0%
!! CCTTACAAGCCAGTTTTGTA+AGG + chr3_3:2564590-2564609 None:intergenic 40.0%
!! CCTTACAAAACTGGCTTGTA+AGG - chr3_3:2564587-2564606 Msa0438260:intron 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + chr3_3:2564681-2564700 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + chr3_3:2564682-2564701 None:intergenic 40.0%
GCTAACCAAAGGTCACAATT+AGG - chr3_3:2564723-2564742 Msa0438260:intron 40.0%
GCTACTCTTTGATATCAAGG+TGG - chr3_3:2565129-2565148 Msa0438260:intron 40.0%
GTGGGCGATCTATTATTTCA+CGG - chr3_3:2565148-2565167 Msa0438260:intron 40.0%
AAACTAAGGCGAATAGGACT+CGG + chr3_3:2565185-2565204 None:intergenic 40.0%
!!! CCTTTTTTTCAGCTCGAGTT+CGG + chr3_3:2565336-2565355 None:intergenic 40.0%
CGACTCGATAAGAATTGGTT+CGG + chr3_3:2565388-2565407 None:intergenic 40.0%
AGTCGCCTTAATTGTGACTA+GGG + chr3_3:2565454-2565473 None:intergenic 40.0%
TAGTCGCCTTAATTGTGACT+AGG + chr3_3:2565455-2565474 None:intergenic 40.0%
TAGTCACAATTAAGGCGACT+AGG - chr3_3:2565454-2565473 Msa0438260:intron 40.0%
AGTCACAATTAAGGCGACTA+GGG - chr3_3:2565455-2565474 Msa0438260:intron 40.0%
!! ATCATTGTGTTGGCTTTGAG+GGG + chr3_3:2565611-2565630 None:intergenic 40.0%
!! CATCATTGTGTTGGCTTTGA+GGG + chr3_3:2565612-2565631 None:intergenic 40.0%
AGCCCAACAATAGATGATCT+AGG - chr3_3:2566321-2566340 Msa0438260:intron 40.0%
TTAGGCCCCAAATTTCAACA+TGG + chr3_3:2566378-2566397 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr3_3:2566396-2566415 None:intergenic 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + chr3_3:2564681-2564700 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + chr3_3:2564682-2564701 None:intergenic 40.0%
AGACCATATAAGCATGGTGT+TGG + chr3_3:2566600-2566619 None:intergenic 40.0%
AAGTGGAAGGAAAAGTCAGA+AGG - chr3_3:2566662-2566681 Msa0438260:intron 40.0%
!! TAGGAAGTGCCTATTTCCTT+TGG - chr3_3:2566774-2566793 Msa0438260:intron 40.0%
! TCCCCTATCTTTTGCATTCA+AGG - chr3_3:2567179-2567198 Msa0438260:intron 40.0%
CCCTTGAATGCAAAAGATAG+GGG + chr3_3:2567183-2567202 None:intergenic 40.0%
! CCCCTATCTTTTGCATTCAA+GGG - chr3_3:2567180-2567199 Msa0438260:intron 40.0%
GCCCTTGAATGCAAAAGATA+GGG + chr3_3:2567184-2567203 None:intergenic 40.0%
AGCCCTTGAATGCAAAAGAT+AGG + chr3_3:2567185-2567204 None:intergenic 40.0%
! TATCTTTTGCATTCAAGGGC+TGG - chr3_3:2567184-2567203 Msa0438260:intron 40.0%
ATTGGGATCTTAGTTTCCTC+AGG - chr3_3:2567237-2567256 Msa0438260:CDS 40.0%
TGGAACAACAGTAAATCCTG+AGG + chr3_3:2567256-2567275 None:intergenic 40.0%
AAAGCGAAGTTTGAACTCTC+TGG - chr3_3:2567294-2567313 Msa0438260:CDS 40.0%
! CAAGAATGCAAAGGTTGGTT+TGG - chr3_3:2567320-2567339 Msa0438260:intron 40.0%
! TTTTTATGCTTCCTAGGGTG+AGG + chr3_3:2567562-2567581 None:intergenic 40.0%
! TCACCCTAGGAAGCATAAAA+AGG - chr3_3:2567561-2567580 Msa0438260:intron 40.0%
GTGTATGTCTGTATTCACAG+TGG - chr3_3:2567707-2567726 Msa0438260:intron 40.0%
!! TGTTTGGTTTGACTGTGGAA+AGG + chr3_3:2567820-2567839 None:intergenic 40.0%
!! GGTAATGTTTGGTTTGACTG+TGG + chr3_3:2567825-2567844 None:intergenic 40.0%
CCAATGGAAGGAGAGATAAA+TGG + chr3_3:2567933-2567952 None:intergenic 40.0%
CCATTTATCTCTCCTTCCAT+TGG - chr3_3:2567930-2567949 Msa0438260:intron 40.0%
ATTAATGGAAGGGAAACCCT+TGG - chr3_3:2567981-2568000 Msa0438260:intron 40.0%
! TTTTGTCTTGCCTTCGAGTA+CGG - chr3_3:2568122-2568141 Msa0438260:intron 40.0%
CCAAAAGGTCAAATAGGTTG+AGG + chr3_3:2568244-2568263 None:intergenic 40.0%
! CCTCAACCTATTTGACCTTT+TGG - chr3_3:2568241-2568260 Msa0438260:intron 40.0%
TTGCTGGGATCGTTTCTATA+AGG - chr3_3:2568415-2568434 Msa0438260:intron 40.0%
TGCTGGGATCGTTTCTATAA+GGG - chr3_3:2568416-2568435 Msa0438260:intron 40.0%
! TTTTACTGCAGGATGATAGC+AGG - chr3_3:2568920-2568939 Msa0438260:intron 40.0%
! ACTCAGTGACGGAAATAATG+TGG + chr3_3:2568956-2568975 None:intergenic 40.0%
GCAGCACAGTAGTTGAATAA+TGG + chr3_3:2569029-2569048 None:intergenic 40.0%
TCATCACCCATATATGGTGA+AGG + chr3_3:2569463-2569482 None:intergenic 40.0%
AGCTGATCATCACCCATATA+TGG + chr3_3:2569469-2569488 None:intergenic 40.0%
ATAAACTCTCTCCAACAGCA+TGG - chr3_3:2569532-2569551 Msa0438260:intron 40.0%
GTATTTGAGCTGTATCAACC+AGG + chr3_3:2569716-2569735 None:intergenic 40.0%
TTGTCAATGATGGTCTCAGT+AGG + chr3_3:2570031-2570050 None:intergenic 40.0%
TTGGGTTTGGGAAAGAGAAG+AGG + chr3_3:2560098-2560117 None:intergenic 45.0%
!!! AGGGTTTTGGGTTTGGGTTT+GGG + chr3_3:2560110-2560129 None:intergenic 45.0%
TTCTTCCGATGCTCAACTCA+AGG - chr3_3:2560186-2560205 Msa0438260:intron 45.0%
!! CGAAAATCGAGGGCTCTAAA+TGG - chr3_3:2560287-2560306 Msa0438260:intron 45.0%
!! GAGGGCTCTAAATGGTTTCT+CGG - chr3_3:2560295-2560314 Msa0438260:intron 45.0%
GGAATTGACCCAGATGTTTC+TGG - chr3_3:2560316-2560335 Msa0438260:intron 45.0%
CAACAGCACCAGAAACATCT+GGG + chr3_3:2560327-2560346 None:intergenic 45.0%
TGATTCTGTTTGCTCTGCTC+AGG - chr3_3:2560363-2560382 Msa0438260:intron 45.0%
CTAATATCACCGTCCAGTGA+TGG - chr3_3:2560460-2560479 Msa0438260:intron 45.0%
CTGCCAACAATTCCTGTGTT+GGG - chr3_3:2560582-2560601 Msa0438260:intron 45.0%
TGCCAACAATTCCTGTGTTG+GGG - chr3_3:2560583-2560602 Msa0438260:intron 45.0%
AGTGAAGCTCCTGTATACAC+AGG - chr3_3:2560747-2560766 Msa0438260:intron 45.0%
GTGAAGCTCCTGTATACACA+GGG - chr3_3:2560748-2560767 Msa0438260:intron 45.0%
AACAGCCTCTTATGTGGGTA+AGG + chr3_3:2560813-2560832 None:intergenic 45.0%
CTTGGAAACAGCCTCTTATG+TGG + chr3_3:2560819-2560838 None:intergenic 45.0%
AAAACCAAGGTATACCCTCC+TGG - chr3_3:2560888-2560907 Msa0438260:intron 45.0%
! AATTCCAGGAGGGTATACCT+TGG + chr3_3:2560895-2560914 None:intergenic 45.0%
ATCGGTCTCTAATTCCAGGA+GGG + chr3_3:2560905-2560924 None:intergenic 45.0%
ATCCCCCGACCAAATTGTTA+AGG - chr3_3:2561000-2561019 Msa0438260:intron 45.0%
! GGATCGAGATTTGGCTGTTT+TGG - chr3_3:2561124-2561143 Msa0438260:intron 45.0%
! GTGTCACTACCAAGGTAGTT+AGG - chr3_3:2561427-2561446 Msa0438260:intron 45.0%
GTGAAGTTGAAGCATGGTTG+AGG + chr3_3:2561499-2561518 None:intergenic 45.0%
ACCATGCTTCAACTTCACTC+TGG - chr3_3:2561501-2561520 Msa0438260:intron 45.0%
ACCAGAGTGAAGTTGAAGCA+TGG + chr3_3:2561505-2561524 None:intergenic 45.0%
GCTTCAACTTCACTCTGGTT+CGG - chr3_3:2561506-2561525 Msa0438260:intron 45.0%
GGAAAATAGAGGGAAGACAG+AGG + chr3_3:2561668-2561687 None:intergenic 45.0%
GGTTCGTAAGTAGGATCGAT+AGG + chr3_3:2561720-2561739 None:intergenic 45.0%
ACGTAACACGGTTCGTAAGT+AGG + chr3_3:2561729-2561748 None:intergenic 45.0%
TAAACACGAGGGACGTAACA+CGG + chr3_3:2561741-2561760 None:intergenic 45.0%
GTGTAGGAACGTAAACACGA+GGG + chr3_3:2561752-2561771 None:intergenic 45.0%
TCGTGTTTACGTTCCTACAC+CGG - chr3_3:2561752-2561771 Msa0438260:intron 45.0%
GAACTCGTTCCTGACTACAT+TGG - chr3_3:2561793-2561812 Msa0438260:intron 45.0%
! TGGTAGTGACCAATGTAGTC+AGG + chr3_3:2561805-2561824 None:intergenic 45.0%
! AGATCCATTTGGTAGTCCAC+TGG - chr3_3:2562009-2562028 Msa0438260:intron 45.0%
GGATCCTAGAAAGTTTGGGT+AGG - chr3_3:2562085-2562104 Msa0438260:intron 45.0%
CTAGATTGCCTGTTGCAGTT+TGG - chr3_3:2562174-2562193 Msa0438260:intron 45.0%
TACAACCAGAAGAGCCCAAA+AGG - chr3_3:2562441-2562460 Msa0438260:intron 45.0%
! ATCTTCCTTTTGGGCTCTTC+TGG + chr3_3:2562449-2562468 None:intergenic 45.0%
! CAGCTGGAGCATCAAAACTA+CGG + chr3_3:2562897-2562916 None:intergenic 45.0%
ATGTTAAGACTGTGATCCCG+TGG - chr3_3:2563082-2563101 Msa0438260:intron 45.0%
AGGTTGGCACTGTTTATGGT+TGG - chr3_3:2563495-2563514 Msa0438260:intron 45.0%
! TCGATCCCTTTTCCACAAGA+TGG - chr3_3:2563572-2563591 Msa0438260:intron 45.0%
! CGATCCCTTTTCCACAAGAT+GGG - chr3_3:2563573-2563592 Msa0438260:intron 45.0%
GCTTCCCATCTTGTGGAAAA+GGG + chr3_3:2563580-2563599 None:intergenic 45.0%
TGCTTCCCATCTTGTGGAAA+AGG + chr3_3:2563581-2563600 None:intergenic 45.0%
! TTTTCCACAAGATGGGAAGC+AGG - chr3_3:2563580-2563599 Msa0438260:intron 45.0%
! CAGAGTTTTCTTTCGGACAG+TGG + chr3_3:2563730-2563749 None:intergenic 45.0%
TATGTGTCAGTCAAGCGGAA+AGG + chr3_3:2563783-2563802 None:intergenic 45.0%
ATAGTACTACCAGCCAACAC+TGG + chr3_3:2563965-2563984 None:intergenic 45.0%
TGATATCCGAAGCGGTCTAT+TGG - chr3_3:2564071-2564090 Msa0438260:intron 45.0%
GACAGTTGTAGATTGCACAG+TGG + chr3_3:2564236-2564255 None:intergenic 45.0%
GGAGATTCCCTATCAGTAGT+TGG - chr3_3:2564331-2564350 Msa0438260:intron 45.0%
! TTGGATATGGTGGTGTGAGA+AGG - chr3_3:2564350-2564369 Msa0438260:intron 45.0%
GTGGTGTGAGAAGGAGATAA+TGG - chr3_3:2564359-2564378 Msa0438260:intron 45.0%
!! GTGAGAAGGAGATAATGGGT+TGG - chr3_3:2564364-2564383 Msa0438260:intron 45.0%
TCAAGTGATTGCAACGGTGA+CGG - chr3_3:2564392-2564411 Msa0438260:intron 45.0%
! ATTGCAACGGTGACGGTATT+TGG - chr3_3:2564399-2564418 Msa0438260:intron 45.0%
CTGTTACTGTTAAGAGGGTG+GGG - chr3_3:2564440-2564459 Msa0438260:intron 45.0%
!! GAAAGAGAGGGTGTTAGGTT+AGG - chr3_3:2564487-2564506 Msa0438260:intron 45.0%
AGGAAGCAGACGAAGATGAA+AGG - chr3_3:2564517-2564536 Msa0438260:intron 45.0%
CGAAGATGAAAGGAATGACG+TGG - chr3_3:2564527-2564546 Msa0438260:intron 45.0%
GGCTGGATTTAGTCCCAAAT+CGG + chr3_3:2564660-2564679 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + chr3_3:2564683-2564702 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG - chr3_3:2564680-2564699 Msa0438260:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG - chr3_3:2564686-2564705 Msa0438260:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr3_3:2564691-2564710 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - chr3_3:2564689-2564708 Msa0438260:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr3_3:2564712-2564731 Msa0438260:intron 45.0%
GCAGCTTTGCTAAAACACCA+TGG + chr3_3:2565033-2565052 None:intergenic 45.0%
!! TCCCACATCGGAAGTATTTG+AGG - chr3_3:2565068-2565087 Msa0438260:intron 45.0%
GCCTCAAATACTTCCGATGT+GGG + chr3_3:2565072-2565091 None:intergenic 45.0%
TGCCTCAAATACTTCCGATG+TGG + chr3_3:2565073-2565092 None:intergenic 45.0%
CCGAACTCGAGCTGAAAAAA+AGG - chr3_3:2565333-2565352 Msa0438260:intron 45.0%
TCCAGCCCTAGTCACAATTA+AGG - chr3_3:2565446-2565465 Msa0438260:intron 45.0%
GTCACAATTAAGGCGACTAG+GGG - chr3_3:2565456-2565475 Msa0438260:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr3_3:2564712-2564731 Msa0438260:intron 45.0%
!! CCATCATTGTGTTGGCTTTG+AGG + chr3_3:2565613-2565632 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+TGG - chr3_3:2564680-2564699 Msa0438260:intron 45.0%
! AGCCAACACAATGATGGTGT+TGG - chr3_3:2565616-2565635 Msa0438260:intron 45.0%
CTCCAACACCATCATTGTGT+TGG + chr3_3:2565621-2565640 None:intergenic 45.0%
! CAACACAATGATGGTGTTGG+AGG - chr3_3:2565619-2565638 Msa0438260:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr3_3:2564712-2564731 Msa0438260:intron 45.0%
GTCGCCTTAATTGTGACCTT+TGG + chr3_3:2565661-2565680 None:intergenic 45.0%
AGGTCACAATTAAGGCGACT+AGG - chr3_3:2565662-2565681 Msa0438260:intron 45.0%
GGTCACAATTAAGGCGACTA+GGG - chr3_3:2565663-2565682 Msa0438260:intron 45.0%
GTCACAATTAAGGCGACTAG+GGG - chr3_3:2565456-2565475 Msa0438260:intron 45.0%
GTGGACCGCAATAATTAAGG+CGG - chr3_3:2565698-2565717 Msa0438260:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr3_3:2564712-2564731 Msa0438260:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr3_3:2564712-2564731 Msa0438260:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr3_3:2564712-2564731 Msa0438260:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr3_3:2564712-2564731 Msa0438260:intron 45.0%
!!! CCTTACATGCCGGTTTTGTA+AGG + chr3_3:2566406-2566425 None:intergenic 45.0%
CCTTACAAAACCGGCATGTA+AGG - chr3_3:2566403-2566422 Msa0438260:intron 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG + chr3_3:2564680-2564699 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + chr3_3:2564683-2564702 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG - chr3_3:2564680-2564699 Msa0438260:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG - chr3_3:2564686-2564705 Msa0438260:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr3_3:2564691-2564710 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - chr3_3:2564689-2564708 Msa0438260:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - chr3_3:2564712-2564731 Msa0438260:intron 45.0%
GTCGCCTTAATTGTGACCTT+TGG + chr3_3:2565661-2565680 None:intergenic 45.0%
AGGTCACAATTAAGGCGACT+AGG - chr3_3:2565662-2565681 Msa0438260:intron 45.0%
GGTCACAATTAAGGCGACTA+GGG - chr3_3:2565663-2565682 Msa0438260:intron 45.0%
GTCACAATTAAGGCGACTAG+GGG - chr3_3:2565456-2565475 Msa0438260:intron 45.0%
! TTCCAGTGCCGTCTTTTACT+TGG - chr3_3:2567271-2567290 Msa0438260:CDS 45.0%
TTCCAAGTAAAAGACGGCAC+TGG + chr3_3:2567276-2567295 None:intergenic 45.0%
! CTCTGGAAGCAAGAATGCAA+AGG - chr3_3:2567311-2567330 Msa0438260:CDS 45.0%
GGAAGCAAGAATGCAAAGGT+TGG - chr3_3:2567315-2567334 Msa0438260:CDS 45.0%
TTAAAGGTTGCAAGCCATGG+TGG + chr3_3:2567539-2567558 None:intergenic 45.0%
AGGTTAAAGGTTGCAAGCCA+TGG + chr3_3:2567542-2567561 None:intergenic 45.0%
! GGTGCTATAGCATCCAAAGA+AGG + chr3_3:2567649-2567668 None:intergenic 45.0%
CTGTATTCACAGTGGAATGC+AGG - chr3_3:2567715-2567734 Msa0438260:intron 45.0%
TGAGCCCCAAAAGGTCAAAT+AGG + chr3_3:2568250-2568269 None:intergenic 45.0%
! GATCGTTTCTATAAGGGCGT+GGG - chr3_3:2568422-2568441 Msa0438260:intron 45.0%
CTATTCCACATGCCACTAGA+GGG + chr3_3:2568664-2568683 None:intergenic 45.0%
ACTATTCCACATGCCACTAG+AGG + chr3_3:2568665-2568684 None:intergenic 45.0%
GTTAACAGGGAACTCAGTGA+CGG + chr3_3:2568967-2568986 None:intergenic 45.0%
TCATGTTGTAGGAAGAGCAG+AGG - chr3_3:2569958-2569977 Msa0438260:CDS 45.0%
!!! TAGGCACTTGGCTTTGGTTT+TGG + chr3_3:2570012-2570031 None:intergenic 45.0%
GGGGCAGAAGCTGATAAATA+CGG + chr3_3:2570073-2570092 None:intergenic 45.0%
!!! AATATTTTAAAAAAAAACTA+AGG + chr3_3:2565199-2565218 None:intergenic 5.0%
!!! ACATAATTTTAAAATTATAT+TGG - chr3_3:2568696-2568715 Msa0438260:intron 5.0%
!!! TAAAATACATTTAAAATATT+AGG - chr3_3:2569356-2569375 Msa0438260:intron 5.0%
!! TTTAAAAGAATATTAATTTA+AGG - chr3_3:2569748-2569767 Msa0438260:intron 5.0%
! GGAAAGAGAAGAGGCACAGA+AGG + chr3_3:2560089-2560108 None:intergenic 50.0%
!!! CAGGGTTTTGGGTTTGGGTT+TGG + chr3_3:2560111-2560130 None:intergenic 50.0%
GCAACAGCACCAGAAACATC+TGG + chr3_3:2560328-2560347 None:intergenic 50.0%
AATTGGGACCCATCACTGGA+CGG + chr3_3:2560472-2560491 None:intergenic 50.0%
CTTCAATTGGGACCCATCAC+TGG + chr3_3:2560476-2560495 None:intergenic 50.0%
TAGGTAGACTCTGGTCGTGT+AGG - chr3_3:2560507-2560526 Msa0438260:intron 50.0%
TTCGAACCTGAGACCAAGAG+AGG + chr3_3:2560554-2560573 None:intergenic 50.0%
CCAACACAGGAATTGTTGGC+AGG + chr3_3:2560584-2560603 None:intergenic 50.0%
CCTGCCAACAATTCCTGTGT+TGG - chr3_3:2560581-2560600 Msa0438260:intron 50.0%
AACAATTCCTGTGTTGGGGC+CGG - chr3_3:2560587-2560606 Msa0438260:intron 50.0%
TATACAGGAGCTTCACTCGC+CGG + chr3_3:2560744-2560763 None:intergenic 50.0%
GCTCCTGTATACACAGGGTT+CGG - chr3_3:2560753-2560772 Msa0438260:intron 50.0%
CTCCTGTATACACAGGGTTC+GGG - chr3_3:2560754-2560773 Msa0438260:intron 50.0%
TTCCCGAACCCTGTGTATAC+AGG + chr3_3:2560759-2560778 None:intergenic 50.0%
TGTATACACAGGGTTCGGGA+AGG - chr3_3:2560758-2560777 Msa0438260:intron 50.0%
!!! GGAAGGTGTCCCACCATTTT+TGG - chr3_3:2560775-2560794 Msa0438260:intron 50.0%
GATCGGTCTCTAATTCCAGG+AGG + chr3_3:2560906-2560925 None:intergenic 50.0%
CGAGATCGGTCTCTAATTCC+AGG + chr3_3:2560909-2560928 None:intergenic 50.0%
GGACTCGTTCCTAACTACCT+TGG + chr3_3:2561439-2561458 None:intergenic 50.0%
ATCATGCGATCCTACGTGCT+GGG + chr3_3:2561460-2561479 None:intergenic 50.0%
GGTGTAGGAACGTAAACACG+AGG + chr3_3:2561753-2561772 None:intergenic 50.0%
AGTTCCCACGTAGGTTCGAT+TGG + chr3_3:2561778-2561797 None:intergenic 50.0%
!!! CGTAGTTTTGATGCTCCAGC+TGG - chr3_3:2562895-2562914 Msa0438260:CDS 50.0%
CTAACCTGCTTCCCATCTTG+TGG + chr3_3:2563587-2563606 None:intergenic 50.0%
! AACGGTGACGGTATTTGGTG+AGG - chr3_3:2564404-2564423 Msa0438260:intron 50.0%
! GGTATTTGGTGAGGAGTAGC+TGG - chr3_3:2564413-2564432 Msa0438260:intron 50.0%
TTACTGTTAAGAGGGTGGGG+AGG - chr3_3:2564443-2564462 Msa0438260:intron 50.0%
!! AGGGAGAAAGAGAGGGTGTT+AGG - chr3_3:2564482-2564501 Msa0438260:intron 50.0%
!! AGAGGGTGTTAGGTTAGGGA+GGG - chr3_3:2564492-2564511 Msa0438260:intron 50.0%
CCAGCCCTAATTGTGACCTT+TGG + chr3_3:2564731-2564750 None:intergenic 50.0%
CCAAAGGTCACAATTAGGGC+TGG - chr3_3:2564728-2564747 Msa0438260:intron 50.0%
! TAGCTCAAGTTCGGCTCGTT+TGG + chr3_3:2564827-2564846 None:intergenic 50.0%
AGTTCACGAGCAACTCGGTT+CGG + chr3_3:2565304-2565323 None:intergenic 50.0%
! CGGCTCGACTCGATAAGAAT+TGG + chr3_3:2565393-2565412 None:intergenic 50.0%
GCCTTAATTGTGACTAGGGC+TGG + chr3_3:2565450-2565469 None:intergenic 50.0%
ACAATTAAGGCGACTAGGGG+CGG - chr3_3:2565459-2565478 Msa0438260:intron 50.0%
GCGGACCGCAATAATTAAGG+CGG - chr3_3:2565478-2565497 Msa0438260:intron 50.0%
ACAATTAAGGCGACTAGGGG+CGG - chr3_3:2565459-2565478 Msa0438260:intron 50.0%
GGGGTGGACCGCAATAATTA+AGG - chr3_3:2565695-2565714 Msa0438260:intron 50.0%
TGAAGGCTAACCAAAGGTCG+CGG - chr3_3:2565582-2565601 Msa0438260:intron 50.0%
GTTGGAAATTCCGCGACCTT+TGG + chr3_3:2565815-2565834 None:intergenic 50.0%
TGAAGGCTAACCAAAGGTCG+CGG - chr3_3:2565582-2565601 Msa0438260:intron 50.0%
GTTGGAAATTCCGCGACCTT+TGG + chr3_3:2565815-2565834 None:intergenic 50.0%
TGAAGGCTAACCAAAGGTCG+CGG - chr3_3:2565582-2565601 Msa0438260:intron 50.0%
GTTGGAAATTCCGCGACCTT+TGG + chr3_3:2565815-2565834 None:intergenic 50.0%
TGAAGGCTAACCAAAGGTCG+CGG - chr3_3:2565582-2565601 Msa0438260:intron 50.0%
GTTGGAAATTCCGCGACCTT+TGG + chr3_3:2565815-2565834 None:intergenic 50.0%
CAAAACCGGCATGTAAGGTG+AGG - chr3_3:2566408-2566427 Msa0438260:intron 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + chr3_3:2566476-2566495 None:intergenic 50.0%
ACAATTAAGGCGACTAGGGG+CGG - chr3_3:2565459-2565478 Msa0438260:intron 50.0%
! CTTTTGCATTCAAGGGCTGG+TGG - chr3_3:2567187-2567206 Msa0438260:intron 50.0%
GCAACCTTTAACCTCACCCT+AGG - chr3_3:2567548-2567567 Msa0438260:intron 50.0%
GCTTCCTAGGGTGAGGTTAA+AGG + chr3_3:2567555-2567574 None:intergenic 50.0%
TGCCTTCGAGTACGGAATTG+TGG - chr3_3:2568130-2568149 Msa0438260:intron 50.0%
GACCACAATTCCGTACTCGA+AGG + chr3_3:2568135-2568154 None:intergenic 50.0%
GGTAACAAGTGAGCCCCAAA+AGG + chr3_3:2568259-2568278 None:intergenic 50.0%
TATCGTGGGTCGTTTCTTGC+TGG - chr3_3:2568399-2568418 Msa0438260:intron 50.0%
ATCGTGGGTCGTTTCTTGCT+GGG - chr3_3:2568400-2568419 Msa0438260:intron 50.0%
GGATCGTTTCTATAAGGGCG+TGG - chr3_3:2568421-2568440 Msa0438260:intron 50.0%
ACACCCTCACACGTCATTTG+GGG + chr3_3:2568604-2568623 None:intergenic 50.0%
CACACCCTCACACGTCATTT+GGG + chr3_3:2568605-2568624 None:intergenic 50.0%
TCACACCCTCACACGTCATT+TGG + chr3_3:2568606-2568625 None:intergenic 50.0%
CACTGAGTTCCCTGTTAACC+AGG - chr3_3:2568968-2568987 Msa0438260:intron 50.0%
TCTCAGTAGGCACTTGGCTT+TGG + chr3_3:2570018-2570037 None:intergenic 50.0%
TGATGGTCTCAGTAGGCACT+TGG + chr3_3:2570024-2570043 None:intergenic 50.0%
CAAGAGAGGAGGTCGCTCTT+AGG + chr3_3:2560540-2560559 None:intergenic 55.0%
CTAAGAGCGACCTCCTCTCT+TGG - chr3_3:2560538-2560557 Msa0438260:intron 55.0%
GAACCTGAGACCAAGAGAGG+AGG + chr3_3:2560551-2560570 None:intergenic 55.0%
CAGGAATTGTTGGCAGGTGC+AGG + chr3_3:2560578-2560597 None:intergenic 55.0%
GGCCCCAACACAGGAATTGT+TGG + chr3_3:2560588-2560607 None:intergenic 55.0%
ACAATTCCTGTGTTGGGGCC+GGG - chr3_3:2560588-2560607 Msa0438260:intron 55.0%
ATACAGGAGCTTCACTCGCC+GGG + chr3_3:2560743-2560762 None:intergenic 55.0%
CGCAGCCTTACCCACATAAG+AGG - chr3_3:2560805-2560824 Msa0438260:intron 55.0%
GATCATGCGATCCTACGTGC+TGG + chr3_3:2561461-2561480 None:intergenic 55.0%
!! GAAGCATGGTTGAGGTGCTG+TGG + chr3_3:2561491-2561510 None:intergenic 55.0%
! TAGGTTCGATTGGCCGGTGT+AGG + chr3_3:2561768-2561787 None:intergenic 55.0%
TCAGGAACGAGTTCCCACGT+AGG + chr3_3:2561787-2561806 None:intergenic 55.0%
!! CTCTGATGTCCAGTGTTGGC+TGG - chr3_3:2563953-2563972 Msa0438260:intron 55.0%
TGTTAAGAGGGTGGGGAGGT+TGG - chr3_3:2564447-2564466 Msa0438260:intron 55.0%
GTTAAGAGGGTGGGGAGGTT+GGG - chr3_3:2564448-2564467 Msa0438260:intron 55.0%
TTAAGAGGGTGGGGAGGTTG+GGG - chr3_3:2564449-2564468 Msa0438260:intron 55.0%
GCAGGTGAGGGAGAAAGAGA+GGG - chr3_3:2564475-2564494 Msa0438260:intron 55.0%
!! GAGAGGGTGTTAGGTTAGGG+AGG - chr3_3:2564491-2564510 Msa0438260:intron 55.0%
GTGTTAGGTTAGGGAGGGAG+AGG - chr3_3:2564497-2564516 Msa0438260:intron 55.0%
!! TTGTGTTGGCTTTGAGGGGC+TGG + chr3_3:2564677-2564696 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr3_3:2564701-2564720 Msa0438260:intron 55.0%
! GAGTCGAACTGGTCTGAGCT+CGG + chr3_3:2565413-2565432 None:intergenic 55.0%
TGAGTCGAGTCGAGTCGAAC+TGG + chr3_3:2565424-2565443 None:intergenic 55.0%
GGGGCGGACCGCAATAATTA+AGG - chr3_3:2565475-2565494 Msa0438260:intron 55.0%
! TGAAGTGTGAGGGGGTGTGT+TGG + chr3_3:2565509-2565528 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr3_3:2564701-2564720 Msa0438260:intron 55.0%
!! TTGTGTTGGCTTTGAGGGGC+TGG + chr3_3:2564677-2564696 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr3_3:2564701-2564720 Msa0438260:intron 55.0%
AATTATTGCGGTCCACCCCG+CGG + chr3_3:2565694-2565713 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr3_3:2564701-2564720 Msa0438260:intron 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr3_3:2564701-2564720 Msa0438260:intron 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr3_3:2564701-2564720 Msa0438260:intron 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr3_3:2564701-2564720 Msa0438260:intron 55.0%
GCACTCCTCACCTTACATGC+CGG + chr3_3:2566416-2566435 None:intergenic 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG + chr3_3:2566493-2566512 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr3_3:2564701-2564720 Msa0438260:intron 55.0%
TGGAGTGGAGGATTCGGGTA+TGG - chr3_3:2567207-2567226 Msa0438260:intron 55.0%
GGAGTGGAGGATTCGGGTAT+GGG - chr3_3:2567208-2567227 Msa0438260:intron 55.0%
! TTCGGGTATGGGCTGTGGAT+TGG - chr3_3:2567219-2567238 Msa0438260:intron 55.0%
! TCGGGTATGGGCTGTGGATT+GGG - chr3_3:2567220-2567239 Msa0438260:intron 55.0%
! CGTTTCTATAAGGGCGTGGG+TGG - chr3_3:2568425-2568444 Msa0438260:intron 55.0%
! TAAGGGCGTGGGTGGTTTGT+AGG - chr3_3:2568433-2568452 Msa0438260:intron 55.0%
TCCCCCCAAATGACGTGTGA+GGG - chr3_3:2568598-2568617 Msa0438260:intron 55.0%
ACCCTCACACGTCATTTGGG+GGG + chr3_3:2568602-2568621 None:intergenic 55.0%
CACCCTCACACGTCATTTGG+GGG + chr3_3:2568603-2568622 None:intergenic 55.0%
! TTGGGTTGCCAACCCTCTAG+TGG - chr3_3:2568649-2568668 Msa0438260:intron 55.0%
TCCACATGCCACTAGAGGGT+TGG + chr3_3:2568660-2568679 None:intergenic 55.0%
CGACCTCCTCTCTTGGTCTC+AGG - chr3_3:2560545-2560564 Msa0438260:intron 60.0%
CAATTCCTGTGTTGGGGCCG+GGG - chr3_3:2560589-2560608 Msa0438260:intron 60.0%
TAAAGAGCGGCCCCACACTC+TGG + chr3_3:2560621-2560640 None:intergenic 60.0%
AGGAACGAGTCCCAGCACGT+AGG - chr3_3:2561447-2561466 Msa0438260:intron 60.0%
ACCGGCCAATCGAACCTACG+TGG - chr3_3:2561770-2561789 Msa0438260:intron 60.0%
CCCACGTAGGTTCGATTGGC+CGG + chr3_3:2561774-2561793 None:intergenic 60.0%
CCGGCCAATCGAACCTACGT+GGG - chr3_3:2561771-2561790 Msa0438260:intron 60.0%
TAAGAGGGTGGGGAGGTTGG+GGG - chr3_3:2564450-2564469 Msa0438260:intron 60.0%
GGCAGGTGAGGGAGAAAGAG+AGG - chr3_3:2564474-2564493 Msa0438260:intron 60.0%
!! GCAACTCGGTTCGGCTCGTT+AGG + chr3_3:2565295-2565314 None:intergenic 60.0%
ACACTTCAGCCCGGCCCAAT+GGG - chr3_3:2565521-2565540 Msa0438260:intron 60.0%
GTCCACGCTTCAGGCCCATT+GGG + chr3_3:2565538-2565557 None:intergenic 60.0%
! TGAAGCGTGAGGGGGTGTGT+TGG + chr3_3:2565729-2565748 None:intergenic 60.0%
GTCCACGCTTCAGGCCCATT+GGG + chr3_3:2565538-2565557 None:intergenic 60.0%
! TGAAGCGTGAGGGGGTGTGT+TGG + chr3_3:2565729-2565748 None:intergenic 60.0%
GTCCACGCTTCAGGCCCATT+GGG + chr3_3:2565538-2565557 None:intergenic 60.0%
TCCTGCATCGTCCACGCTTC+AGG + chr3_3:2565871-2565890 None:intergenic 60.0%
! GGGCTGAAGCGTGAGGTGTT+GGG + chr3_3:2565896-2565915 None:intergenic 60.0%
CAACACCTCACGCTTCAGCC+CGG - chr3_3:2565895-2565914 Msa0438260:intron 60.0%
GTCCACGCTTCAGGCCCATT+GGG + chr3_3:2565538-2565557 None:intergenic 60.0%
! TGAAGCGTGAGGGGGTGTGT+TGG + chr3_3:2565729-2565748 None:intergenic 60.0%
GTCCACGCTTCAGGCCCATT+GGG + chr3_3:2565538-2565557 None:intergenic 60.0%
! TGAAGCGTGAGGGGGTGTGT+TGG + chr3_3:2565729-2565748 None:intergenic 60.0%
GTCCACGCTTCAGGCCCATT+GGG + chr3_3:2565538-2565557 None:intergenic 60.0%
TCCTGCATCGTCCACGCTTC+AGG + chr3_3:2565871-2565890 None:intergenic 60.0%
! GGGCTGAAGCGTGAGGTGTT+GGG + chr3_3:2565896-2565915 None:intergenic 60.0%
CAACACCTCACGCTTCAGCC+CGG - chr3_3:2565895-2565914 Msa0438260:intron 60.0%
GTCCACGCTTCAGGCCCATT+GGG + chr3_3:2565538-2565557 None:intergenic 60.0%
! TGAAGCGTGAGGGGGTGTGT+TGG + chr3_3:2565729-2565748 None:intergenic 60.0%
GTCCACGCTTCAGGCCCATT+GGG + chr3_3:2565538-2565557 None:intergenic 60.0%
TCCTGCATCGTCCACGCTTC+AGG + chr3_3:2565871-2565890 None:intergenic 60.0%
CTAGGGGCGGACCGCAATTA+AGG - chr3_3:2566566-2566585 Msa0438260:CDS 60.0%
! GCATTCAAGGGCTGGTGGAG+TGG - chr3_3:2567192-2567211 Msa0438260:intron 60.0%
! TTCAAGGGCTGGTGGAGTGG+AGG - chr3_3:2567195-2567214 Msa0438260:intron 60.0%
GGCTGGTGGAGTGGAGGATT+CGG - chr3_3:2567201-2567220 Msa0438260:intron 60.0%
GCTGGTGGAGTGGAGGATTC+GGG - chr3_3:2567202-2567221 Msa0438260:intron 60.0%
! GAGGATTCGGGTATGGGCTG+TGG - chr3_3:2567214-2567233 Msa0438260:intron 60.0%
CTCCCCCCAAATGACGTGTG+AGG - chr3_3:2568597-2568616 Msa0438260:intron 60.0%
GCCAACCCTCTAGTGGCATG+TGG - chr3_3:2568656-2568675 Msa0438260:intron 60.0%
AGGTTGGGGGTGGCAGGTGA+GGG - chr3_3:2564463-2564482 Msa0438260:intron 65.0%
CACCCCCTCACACTTCAGCC+CGG - chr3_3:2565512-2565531 Msa0438260:intron 65.0%
TGGGCCGGGCTGAAGTGTGA+GGG + chr3_3:2565519-2565538 None:intergenic 65.0%
TTGGGCCGGGCTGAAGTGTG+AGG + chr3_3:2565520-2565539 None:intergenic 65.0%
CACACTTCAGCCCGGCCCAA+TGG - chr3_3:2565520-2565539 Msa0438260:intron 65.0%
ACGCTTCAGGCCCATTGGGC+CGG + chr3_3:2565534-2565553 None:intergenic 65.0%
CGTCCACGCTTCAGGCCCAT+TGG + chr3_3:2565539-2565558 None:intergenic 65.0%
GGCCTGAAGCGTGGACGATG+CGG - chr3_3:2565542-2565561 Msa0438260:intron 65.0%
GCCTGAAGCGTGGACGATGC+GGG - chr3_3:2565543-2565562 Msa0438260:intron 65.0%
CCTGAAGCGTGGACGATGCG+GGG - chr3_3:2565544-2565563 Msa0438260:intron 65.0%
!! TGGACGATGCGGGGTGTTGG+AGG - chr3_3:2565553-2565572 Msa0438260:intron 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG - chr3_3:2565741-2565760 Msa0438260:intron 65.0%
ACGCTTCAGGCCCATTGGGC+CGG + chr3_3:2565534-2565553 None:intergenic 65.0%
CGTCCACGCTTCAGGCCCAT+TGG + chr3_3:2565539-2565558 None:intergenic 65.0%
GGCCTGAAGCGTGGACGATG+CGG - chr3_3:2565542-2565561 Msa0438260:intron 65.0%
GCCTGAAGCGTGGACGATGC+GGG - chr3_3:2565543-2565562 Msa0438260:intron 65.0%
CCTGAAGCGTGGACGATGCG+GGG - chr3_3:2565544-2565563 Msa0438260:intron 65.0%
!! TGGACGATGCGGGGTGTTGG+AGG - chr3_3:2565553-2565572 Msa0438260:intron 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG - chr3_3:2565741-2565760 Msa0438260:intron 65.0%
ACGCTTCAGGCCCATTGGGC+CGG + chr3_3:2565534-2565553 None:intergenic 65.0%
CGTCCACGCTTCAGGCCCAT+TGG + chr3_3:2565539-2565558 None:intergenic 65.0%
GCCTGAAGCGTGGACGATGC+AGG - chr3_3:2565543-2565562 Msa0438260:intron 65.0%
CGGGCTGAAGCGTGAGGTGT+TGG + chr3_3:2565897-2565916 None:intergenic 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG - chr3_3:2565741-2565760 Msa0438260:intron 65.0%
ACGCTTCAGGCCCATTGGGC+CGG + chr3_3:2565534-2565553 None:intergenic 65.0%
CGTCCACGCTTCAGGCCCAT+TGG + chr3_3:2565539-2565558 None:intergenic 65.0%
GGCCTGAAGCGTGGACGATG+CGG - chr3_3:2565542-2565561 Msa0438260:intron 65.0%
GCCTGAAGCGTGGACGATGC+GGG - chr3_3:2565543-2565562 Msa0438260:intron 65.0%
CCTGAAGCGTGGACGATGCG+GGG - chr3_3:2565544-2565563 Msa0438260:intron 65.0%
!! TGGACGATGCGGGGTGTTGG+AGG - chr3_3:2565553-2565572 Msa0438260:intron 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG - chr3_3:2565741-2565760 Msa0438260:intron 65.0%
ACGCTTCAGGCCCATTGGGC+CGG + chr3_3:2565534-2565553 None:intergenic 65.0%
CGTCCACGCTTCAGGCCCAT+TGG + chr3_3:2565539-2565558 None:intergenic 65.0%
GGCCTGAAGCGTGGACGATG+CGG - chr3_3:2565542-2565561 Msa0438260:intron 65.0%
GCCTGAAGCGTGGACGATGC+GGG - chr3_3:2565543-2565562 Msa0438260:intron 65.0%
CCTGAAGCGTGGACGATGCG+GGG - chr3_3:2565544-2565563 Msa0438260:intron 65.0%
!! TGGACGATGCGGGGTGTTGG+AGG - chr3_3:2565553-2565572 Msa0438260:intron 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG - chr3_3:2565741-2565760 Msa0438260:intron 65.0%
ACGCTTCAGGCCCATTGGGC+CGG + chr3_3:2565534-2565553 None:intergenic 65.0%
CGTCCACGCTTCAGGCCCAT+TGG + chr3_3:2565539-2565558 None:intergenic 65.0%
GCCTGAAGCGTGGACGATGC+AGG - chr3_3:2565543-2565562 Msa0438260:intron 65.0%
CGGGCTGAAGCGTGAGGTGT+TGG + chr3_3:2565897-2565916 None:intergenic 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG - chr3_3:2565741-2565760 Msa0438260:intron 65.0%
ACGCTTCAGGCCCATTGGGC+CGG + chr3_3:2565534-2565553 None:intergenic 65.0%
CGTCCACGCTTCAGGCCCAT+TGG + chr3_3:2565539-2565558 None:intergenic 65.0%
GGCCTGAAGCGTGGACGATG+CGG - chr3_3:2565542-2565561 Msa0438260:intron 65.0%
GCCTGAAGCGTGGACGATGC+GGG - chr3_3:2565543-2565562 Msa0438260:intron 65.0%
CCTGAAGCGTGGACGATGCG+GGG - chr3_3:2565544-2565563 Msa0438260:intron 65.0%
!! TGGACGATGCGGGGTGTTGG+AGG - chr3_3:2565553-2565572 Msa0438260:intron 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG - chr3_3:2565741-2565760 Msa0438260:intron 65.0%
ACGCTTCAGGCCCATTGGGC+CGG + chr3_3:2565534-2565553 None:intergenic 65.0%
CGTCCACGCTTCAGGCCCAT+TGG + chr3_3:2565539-2565558 None:intergenic 65.0%
GCCTGAAGCGTGGACGATGC+AGG - chr3_3:2565543-2565562 Msa0438260:intron 65.0%
! GGGCGTGGGTGGTTTGTAGG+TGG - chr3_3:2568436-2568455 Msa0438260:intron 65.0%
GAGGTTGGGGGTGGCAGGTG+AGG - chr3_3:2564462-2564481 Msa0438260:intron 70.0%
GGCCGGGCTGAAGTGTGAGG+GGG + chr3_3:2565517-2565536 None:intergenic 70.0%
GGGCCGGGCTGAAGTGTGAG+GGG + chr3_3:2565518-2565537 None:intergenic 70.0%
CGCTTCAGGCCCATTGGGCC+GGG + chr3_3:2565533-2565552 None:intergenic 70.0%
GGCCCAATGGGCCTGAAGCG+TGG - chr3_3:2565533-2565552 Msa0438260:intron 70.0%
CCCCGCATCGTCCACGCTTC+AGG + chr3_3:2565547-2565566 None:intergenic 70.0%
GCGTGGACGATGCGGGGTGT+TGG - chr3_3:2565550-2565569 Msa0438260:intron 70.0%
! TGAGGGGCTGGCGCGACCTT+TGG + chr3_3:2565595-2565614 None:intergenic 70.0%
CACCCCCTCACGCTTCAGCC+CGG - chr3_3:2565732-2565751 Msa0438260:intron 70.0%
TGGGCCGGGCTGAAGCGTGA+GGG + chr3_3:2565739-2565758 None:intergenic 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG + chr3_3:2565740-2565759 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+TGG - chr3_3:2565740-2565759 Msa0438260:intron 70.0%
CGCTTCAGGCCCATTGGGCC+GGG + chr3_3:2565533-2565552 None:intergenic 70.0%
GGCCCAATGGGCCTGAAGCG+TGG - chr3_3:2565533-2565552 Msa0438260:intron 70.0%
CCCCGCATCGTCCACGCTTC+AGG + chr3_3:2565547-2565566 None:intergenic 70.0%
GCGTGGACGATGCGGGGTGT+TGG - chr3_3:2565550-2565569 Msa0438260:intron 70.0%
CACCCCCTCACGCTTCAGCC+CGG - chr3_3:2565732-2565751 Msa0438260:intron 70.0%
TGGGCCGGGCTGAAGCGTGA+GGG + chr3_3:2565739-2565758 None:intergenic 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG + chr3_3:2565740-2565759 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+TGG - chr3_3:2565740-2565759 Msa0438260:intron 70.0%
CGCTTCAGGCCCATTGGGCC+GGG + chr3_3:2565533-2565552 None:intergenic 70.0%
GGCCCAATGGGCCTGAAGCG+TGG - chr3_3:2565533-2565552 Msa0438260:intron 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG + chr3_3:2565740-2565759 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+TGG - chr3_3:2565740-2565759 Msa0438260:intron 70.0%
CGCTTCAGGCCCATTGGGCC+GGG + chr3_3:2565533-2565552 None:intergenic 70.0%
GGCCCAATGGGCCTGAAGCG+TGG - chr3_3:2565533-2565552 Msa0438260:intron 70.0%
CCCCGCATCGTCCACGCTTC+AGG + chr3_3:2565547-2565566 None:intergenic 70.0%
GCGTGGACGATGCGGGGTGT+TGG - chr3_3:2565550-2565569 Msa0438260:intron 70.0%
CACCCCCTCACGCTTCAGCC+CGG - chr3_3:2565732-2565751 Msa0438260:intron 70.0%
TGGGCCGGGCTGAAGCGTGA+GGG + chr3_3:2565739-2565758 None:intergenic 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG + chr3_3:2565740-2565759 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+TGG - chr3_3:2565740-2565759 Msa0438260:intron 70.0%
CGCTTCAGGCCCATTGGGCC+GGG + chr3_3:2565533-2565552 None:intergenic 70.0%
GGCCCAATGGGCCTGAAGCG+TGG - chr3_3:2565533-2565552 Msa0438260:intron 70.0%
CCCCGCATCGTCCACGCTTC+AGG + chr3_3:2565547-2565566 None:intergenic 70.0%
GCGTGGACGATGCGGGGTGT+TGG - chr3_3:2565550-2565569 Msa0438260:intron 70.0%
CACCCCCTCACGCTTCAGCC+CGG - chr3_3:2565732-2565751 Msa0438260:intron 70.0%
TGGGCCGGGCTGAAGCGTGA+GGG + chr3_3:2565739-2565758 None:intergenic 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG + chr3_3:2565740-2565759 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+TGG - chr3_3:2565740-2565759 Msa0438260:intron 70.0%
CGCTTCAGGCCCATTGGGCC+GGG + chr3_3:2565533-2565552 None:intergenic 70.0%
GGCCCAATGGGCCTGAAGCG+TGG - chr3_3:2565533-2565552 Msa0438260:intron 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG + chr3_3:2565740-2565759 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+TGG - chr3_3:2565740-2565759 Msa0438260:intron 70.0%
CGCTTCAGGCCCATTGGGCC+GGG + chr3_3:2565533-2565552 None:intergenic 70.0%
GGCCCAATGGGCCTGAAGCG+TGG - chr3_3:2565533-2565552 Msa0438260:intron 70.0%
CCCCGCATCGTCCACGCTTC+AGG + chr3_3:2565547-2565566 None:intergenic 70.0%
GCGTGGACGATGCGGGGTGT+TGG - chr3_3:2565550-2565569 Msa0438260:intron 70.0%
CACCCCCTCACGCTTCAGCC+CGG - chr3_3:2565732-2565751 Msa0438260:intron 70.0%
TGGGCCGGGCTGAAGCGTGA+GGG + chr3_3:2565739-2565758 None:intergenic 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG + chr3_3:2565740-2565759 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+TGG - chr3_3:2565740-2565759 Msa0438260:intron 70.0%
CGCTTCAGGCCCATTGGGCC+GGG + chr3_3:2565533-2565552 None:intergenic 70.0%
GGCCCAATGGGCCTGAAGCG+TGG - chr3_3:2565533-2565552 Msa0438260:intron 70.0%
CTGTGTTGGGGCCGGGGCCA+GGG - chr3_3:2560595-2560614 Msa0438260:intron 75.0%
CCACACTCTGGCCCTGGCCC+CGG + chr3_3:2560609-2560628 None:intergenic 75.0%
CGGGGCCAGGGCCAGAGTGT+GGG - chr3_3:2560607-2560626 Msa0438260:intron 75.0%
GGGGCCAGGGCCAGAGTGTG+GGG - chr3_3:2560608-2560627 Msa0438260:intron 75.0%
GAGGGTGGGGAGGTTGGGGG+TGG - chr3_3:2564453-2564472 Msa0438260:intron 75.0%
GTGGGGAGGTTGGGGGTGGC+AGG - chr3_3:2564457-2564476 Msa0438260:intron 75.0%
AGGCGACTAGGGGCGGACCG+CGG - chr3_3:2565466-2565485 Msa0438260:intron 75.0%
GGCCGGGCTGAAGCGTGAGG+GGG + chr3_3:2565737-2565756 None:intergenic 75.0%
GGGCCGGGCTGAAGCGTGAG+GGG + chr3_3:2565738-2565757 None:intergenic 75.0%
GGCCGGGCTGAAGCGTGAGG+GGG + chr3_3:2565737-2565756 None:intergenic 75.0%
GGGCCGGGCTGAAGCGTGAG+GGG + chr3_3:2565738-2565757 None:intergenic 75.0%
GGCCGGGCTGAAGCGTGAGG+GGG + chr3_3:2565737-2565756 None:intergenic 75.0%
GGGCCGGGCTGAAGCGTGAG+GGG + chr3_3:2565738-2565757 None:intergenic 75.0%
GGCCGGGCTGAAGCGTGAGG+GGG + chr3_3:2565737-2565756 None:intergenic 75.0%
GGGCCGGGCTGAAGCGTGAG+GGG + chr3_3:2565738-2565757 None:intergenic 75.0%
GGCCGGGCTGAAGCGTGAGG+GGG + chr3_3:2565737-2565756 None:intergenic 75.0%
GGGCCGGGCTGAAGCGTGAG+GGG + chr3_3:2565738-2565757 None:intergenic 75.0%
! CCTGGCCCCGGCCCCAACAC+AGG + chr3_3:2560597-2560616 None:intergenic 80.0%
! CCTGTGTTGGGGCCGGGGCC+AGG - chr3_3:2560594-2560613 Msa0438260:intron 80.0%
! CCGGGGCCAGGGCCAGAGTG+TGG - chr3_3:2560606-2560625 Msa0438260:intron 80.0%
! GCGGCCCCACACTCTGGCCC+TGG + chr3_3:2560615-2560634 None:intergenic 80.0%
! GGCGACTAGGGGCGGACCGC+GGG - chr3_3:2565467-2565486 Msa0438260:intron 80.0%
! GCGACTAGGGGCGGACCGCG+GGG - chr3_3:2565676-2565695 Msa0438260:intron 80.0%
! ACTAGGGGCGGACCGCGGGG+TGG - chr3_3:2565679-2565698 Msa0438260:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 2559932 2570216 2559932 ID=Msa0438260;Name=Msa0438260
chr3_3 mRNA 2559932 2570216 2559932 ID=Msa0438260-mRNA-1;Parent=Msa0438260;Name=Msa0438260-mRNA-1;_AED=0.04;_eAED=0.04;_QI=51|1|1|1|1|1|6|153|286
chr3_3 exon 2559932 2560179 2559932 ID=Msa0438260-mRNA-1:exon:586;Parent=Msa0438260-mRNA-1
chr3_3 exon 2561145 2561217 2561145 ID=Msa0438260-mRNA-1:exon:585;Parent=Msa0438260-mRNA-1
chr3_3 exon 2562816 2562947 2562816 ID=Msa0438260-mRNA-1:exon:584;Parent=Msa0438260-mRNA-1
chr3_3 exon 2566547 2566599 2566547 ID=Msa0438260-mRNA-1:exon:583;Parent=Msa0438260-mRNA-1
chr3_3 exon 2567232 2567337 2567232 ID=Msa0438260-mRNA-1:exon:582;Parent=Msa0438260-mRNA-1
chr3_3 exon 2569764 2570216 2569764 ID=Msa0438260-mRNA-1:exon:581;Parent=Msa0438260-mRNA-1
chr3_3 five_prime_UTR 2570166 2570216 2570166 ID=Msa0438260-mRNA-1:five_prime_utr;Parent=Msa0438260-mRNA-1
chr3_3 CDS 2569764 2570165 2569764 ID=Msa0438260-mRNA-1:cds;Parent=Msa0438260-mRNA-1
chr3_3 CDS 2567232 2567337 2567232 ID=Msa0438260-mRNA-1:cds;Parent=Msa0438260-mRNA-1
chr3_3 CDS 2566547 2566599 2566547 ID=Msa0438260-mRNA-1:cds;Parent=Msa0438260-mRNA-1
chr3_3 CDS 2562816 2562947 2562816 ID=Msa0438260-mRNA-1:cds;Parent=Msa0438260-mRNA-1
chr3_3 CDS 2561145 2561217 2561145 ID=Msa0438260-mRNA-1:cds;Parent=Msa0438260-mRNA-1
chr3_3 CDS 2560085 2560179 2560085 ID=Msa0438260-mRNA-1:cds;Parent=Msa0438260-mRNA-1
chr3_3 three_prime_UTR 2559932 2560084 2559932 ID=Msa0438260-mRNA-1:three_prime_utr;Parent=Msa0438260-mRNA-1
Gene Sequence

>Msa0438260

ATGGAATCCCTAAAAATACAATTTACACCAGAATTTCACCAAACCCAAACCCATTTCATGAACAAACTCTCTTCCAAACTCAAACCCATCATTTCTTTCAGATCCTTCTGTGCCTCTTCTCTTTCCCAAACCCAAACCCAAAACCCTGAAATCATAGTTCCCGTAAGAAGAAAACGTAGGGTTGTATCTTCTTCTTCTTCTTCTTCTTCCGATGCTCAACTCAAGGAAAATTGGTTGGCTTCAATCTCTTACTCTTCCCCAGCAAATTCTACCCATTTTTTGAGTGAAGACCAGAATCTGACATCGAAAATCGAGGGCTCTAAATGGTTTCTCGGAATTGACCCAGATGTTTCTGGTGCTGTTGCGTTGTTGAAAATGCATGATTCTGTTTGCTCTGCTCAGGTATTTGACTCTCCTCATGTGCAATTACTTGTTGGCAAAAGAACACGGAGACGTTTAAATGCCAATTCTATTGTTCAGTTGATCCGTAGTTTTGATGCTCCAGCTGGAACCACTGCATATATAGAACAGTCGATCCCTTTTCCACAAGATGGGAAGCAGGGCTGGTGGAGTGGAGGATTCGGGTATGGGCTGTGGATTGGGATCTTAGTTTCCTCAGGATTTACTGTTGTTCCAGTGCCGTCTTTTACTTGGAAAGCGAAGTTTGAACTCTCTGGAAGCAAGAATGCAAAGGATGATAGCAGGAAACTTGCATCCACATTATTTCCGTCACTGAGTTCCCTGTTAACCAGGAAAAAAGATCATGGAAGAGCAGAGGCTTTATTAATTGCTGCATATGGCAAAGACCAAAACCAAAGCCAAGTGCCTACTGAGACCATCATTGACAAATTGGAAACCTGA
Protein sequence

>Msa0438260

MESLKIQFTPEFHQTQTHFMNKLSSKLKPIISFRSFCASSLSQTQTQNPEIIVPVRRKRRVVSSSSSSSSDAQLKENWLASISYSSPANSTHFLSEDQNLTSKIEGSKWFLGIDPDVSGAVALLKMHDSVCSAQVFDSPHVQLLVGKRTRRRLNANSIVQLIRSFDAPAGTTAYIEQSIPFPQDGKQGWWSGGFGYGLWIGILVSSGFTVVPVPSFTWKAKFELSGSKNAKDDSRKLASTLFPSLSSLLTRKKDHGRAEALLIAAYGKDQNQSQVPTETIIDKLET*