AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0451740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0451740 MtrunA17_Chr3g0097231 84.153 549 20 6 1 549 1 482 0.0 912
Msa0451740 MtrunA17_Chr2g0330311 81.818 341 52 3 210 549 178 509 0.0 585
Msa0451740 MtrunA17_Chr2g0330331 82.154 325 57 1 207 530 5 329 0.0 553
Msa0451740 MtrunA17_Chr1g0186811 44.664 253 133 4 262 513 33 279 3.02e-71 231
Msa0451740 MtrunA17_Chr7g0272371 41.429 280 156 5 236 513 8 281 1.66e-70 229
Msa0451740 MtrunA17_Chr7g0274931 43.561 264 142 4 251 513 22 279 1.19e-69 227
Msa0451740 MtrunA17_Chr1g0190121 42.803 264 144 4 251 513 22 279 1.76e-69 226
Msa0451740 MtrunA17_Chr5g0436061 43.874 253 135 4 262 513 50 296 1.07e-68 224
Msa0451740 MtrunA17_Chr8g0334361 42.857 252 137 4 263 513 32 277 1.18e-68 223
Msa0451740 MtrunA17_Chr8g0387541 42.049 283 153 5 236 513 4 280 3.47e-68 223
Msa0451740 MtrunA17_Chr1g0167751 41.897 253 140 4 262 513 33 279 2.68e-66 218
Msa0451740 MtrunA17_Chr5g0445011 38.225 293 172 6 242 532 4 289 3.91e-59 198
Msa0451740 MtrunA17_Chr8g0364041 42.857 245 134 5 289 531 50 290 4.42e-59 198
Msa0451740 MtrunA17_Chr5g0415261 42.449 245 135 5 289 531 50 290 1.08e-58 197
Msa0451740 MtrunA17_Chr8g0378521 39.273 275 154 7 266 535 33 299 6.46e-58 195
Msa0451740 MtrunA17_Chr7g0268381 36.594 276 168 4 242 516 14 283 1.01e-57 195
Msa0451740 MtrunA17_Chr1g0165341 45.106 235 125 4 283 515 40 272 5.57e-57 192
Msa0451740 MtrunA17_Chr8g0369981 35.598 368 175 12 232 537 70 437 2.93e-53 187
Msa0451740 MtrunA17_Chr2g0322121 36.604 265 143 8 266 513 675 931 5.44e-41 158
Msa0451740 MtrunA17_Chr4g0025471 36.226 265 144 8 266 513 680 936 1.17e-39 154
Msa0451740 MtrunA17_Chr1g0196211 36.111 180 99 6 345 512 5 180 9.72e-26 105
Msa0451740 MtrunA17_Chr2g0330011 37.255 153 80 5 235 373 198 348 1.20e-19 90.5
Msa0451740 MtrunA17_Chr8g0393041 42.105 114 66 0 11 124 479 592 3.52e-18 88.2
Msa0451740 MtrunA17_Chr1g0160051 34.711 121 78 1 11 130 181 301 2.41e-17 85.1
Msa0451740 MtrunA17_Chr5g0397161 31.579 171 114 2 11 178 2 172 2.79e-17 84.0
Msa0451740 MtrunA17_Chr4g0050371 43.636 110 62 0 7 116 484 593 1.04e-16 83.6
Msa0451740 MtrunA17_Chr1g0192811 39.286 112 67 1 7 118 87 197 8.99e-16 80.1
Msa0451740 MtrunA17_Chr5g0398901 39.216 102 62 0 11 112 2 103 1.30e-15 79.7
Msa0451740 MtrunA17_Chr5g0398901 33.621 116 77 0 11 126 392 507 6.56e-14 74.3
Msa0451740 MtrunA17_Chr2g0316221 30.469 128 89 0 6 133 457 584 2.02e-15 79.3
Msa0451740 MtrunA17_Chr2g0316221 34.188 117 75 2 12 128 222 336 1.99e-11 66.6
Msa0451740 MtrunA17_Chr6g0470241 31.818 132 86 1 11 142 2 129 4.58e-13 70.9
Msa0451740 MtrunA17_Chr1g0166441 33.628 113 75 0 14 126 14 126 7.65e-13 69.7
Msa0451740 MtrunA17_Chr3g0124261 33.945 109 70 1 12 120 223 329 1.11e-12 70.5
Msa0451740 MtrunA17_Chr4g0057051 42.045 88 51 0 15 102 119 206 1.45e-12 69.7
Msa0451740 MtrunA17_Chr7g0237741 30.894 123 78 1 8 123 92 214 1.56e-11 65.1
Msa0451740 MtrunA17_Chr7g0274241 33.613 119 79 0 10 128 334 452 3.30e-11 65.5
Msa0451740 MtrunA17_Chr2g0323971 29.927 137 87 2 8 135 95 231 3.93e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0451740 AT2G42810.2 78.832 548 101 4 3 549 5 538 0.0 877
Msa0451740 AT2G42810.3 79.015 548 99 5 3 549 5 537 0.0 877
Msa0451740 AT2G42810.1 62.226 548 138 5 3 549 5 484 0.0 658
Msa0451740 AT2G42810.5 62.226 548 138 5 3 549 5 484 0.0 658
Msa0451740 AT2G42810.4 62.226 548 138 5 3 549 5 484 0.0 658
Msa0451740 AT2G29400.1 43.922 255 137 3 262 516 50 298 1.36e-70 229
Msa0451740 AT5G27840.1 42.391 276 151 5 240 513 16 285 1.47e-70 229
Msa0451740 AT5G59160.3 39.032 310 172 6 235 537 10 309 1.48e-70 229
Msa0451740 AT5G59160.2 39.032 310 172 6 235 537 10 309 1.48e-70 229
Msa0451740 AT5G59160.1 39.032 310 172 6 235 537 10 309 1.48e-70 229
Msa0451740 AT5G27840.2 42.391 276 151 5 240 513 16 285 1.58e-70 229
Msa0451740 AT5G27840.3 42.391 276 151 5 240 513 16 285 1.58e-70 229
Msa0451740 AT5G27840.4 42.391 276 151 5 240 513 16 285 1.97e-70 229
Msa0451740 AT3G46820.1 40.909 286 156 5 235 513 10 289 3.62e-70 228
Msa0451740 AT5G43380.1 43.083 253 137 4 262 513 33 279 1.27e-68 224
Msa0451740 AT5G43380.3 43.083 253 137 4 262 513 33 279 1.76e-68 224
Msa0451740 AT2G39840.1 44.664 253 133 4 262 513 47 293 2.05e-68 224
Msa0451740 AT5G43380.2 43.083 253 137 4 262 513 33 279 2.18e-68 224
Msa0451740 AT3G05580.1 41.667 276 153 5 240 513 16 285 3.09e-68 223
Msa0451740 AT4G11240.1 43.478 253 136 4 262 513 34 280 2.31e-67 221
Msa0451740 AT1G64040.1 39.789 284 160 5 235 513 3 280 2.76e-65 216
Msa0451740 AT5G55260.1 37.667 300 178 6 242 539 4 296 1.85e-60 202
Msa0451740 AT2G42500.1 37.943 282 165 5 236 516 11 283 2.55e-60 202
Msa0451740 AT4G26720.1 41.897 253 142 5 289 539 47 296 8.94e-60 201
Msa0451740 AT1G10430.2 42.857 245 134 5 289 531 50 290 4.18e-59 199
Msa0451740 AT1G10430.1 42.857 245 134 5 289 531 50 290 4.18e-59 199
Msa0451740 AT1G59830.1 42.857 245 134 5 289 531 50 290 9.20e-59 198
Msa0451740 AT3G58500.1 37.143 280 168 5 238 516 11 283 2.27e-58 197
Msa0451740 AT3G05580.2 41.564 243 134 5 240 480 16 252 5.57e-58 194
Msa0451740 AT1G69960.1 42.449 245 135 5 289 531 51 291 5.64e-58 196
Msa0451740 AT1G50370.1 45.852 229 120 4 289 515 46 272 9.49e-57 192
Msa0451740 AT3G19980.1 44.255 235 127 4 283 515 40 272 3.10e-55 188
Msa0451740 AT5G63870.1 38.361 305 131 11 290 537 81 385 2.57e-54 189
Msa0451740 AT5G63870.2 38.361 305 131 11 290 537 81 385 2.57e-54 189
Msa0451740 AT5G55260.2 33.431 341 177 8 242 539 4 337 2.42e-53 185
Msa0451740 AT2G42500.2 39.111 225 135 2 293 516 13 236 2.88e-50 174
Msa0451740 AT1G59830.2 45.226 199 104 4 289 485 50 245 1.76e-49 172
Msa0451740 AT1G03445.1 37.273 330 170 12 235 539 446 763 3.80e-48 179
Msa0451740 AT1G03445.2 37.273 330 170 12 235 539 446 763 3.87e-48 179
Msa0451740 AT4G03080.1 39.419 241 125 7 290 513 581 817 5.23e-41 159
Msa0451740 AT2G27210.1 35.741 263 144 8 268 513 688 942 5.92e-38 150
Msa0451740 AT2G27210.2 35.741 263 144 8 268 513 683 937 6.96e-38 149
Msa0451740 AT1G48120.1 33.333 321 149 8 262 519 630 948 9.84e-38 149
Msa0451740 AT5G63870.3 37.963 216 100 6 290 471 81 296 1.67e-37 140
Msa0451740 AT1G08420.2 36.719 256 137 8 275 513 701 948 2.00e-37 148
Msa0451740 AT1G08420.1 36.719 256 137 8 275 513 706 953 2.24e-37 148
Msa0451740 AT5G10900.3 30.606 330 181 8 237 519 163 491 5.13e-35 139
Msa0451740 AT5G10900.1 30.606 330 181 8 237 519 163 491 5.59e-35 139
Msa0451740 AT5G10900.2 30.606 330 181 8 237 519 163 491 5.71e-35 139
Msa0451740 AT2G42500.3 42.056 107 59 2 289 392 57 163 7.72e-21 90.5
Msa0451740 AT2G42500.4 40.541 111 63 2 289 396 57 167 1.03e-20 90.1
Msa0451740 AT2G42500.5 42.056 107 59 2 289 392 57 163 1.30e-20 89.7
Msa0451740 AT4G11260.1 35.398 113 73 0 11 123 2 114 2.03e-16 81.3
Msa0451740 AT5G09420.1 38.333 120 74 0 7 126 484 603 5.92e-16 81.6
Msa0451740 AT3G17970.1 44.340 106 59 0 11 116 474 579 5.97e-16 81.3
Msa0451740 AT1G62740.1 40.196 102 61 0 11 112 2 103 2.59e-15 79.3
Msa0451740 AT1G62740.1 30.508 118 82 0 11 128 382 499 1.83e-11 67.0
Msa0451740 AT4G08320.2 35.043 117 75 1 11 126 175 291 7.88e-15 77.4
Msa0451740 AT1G12270.1 37.288 118 74 0 11 128 2 119 9.11e-15 77.8
Msa0451740 AT1G12270.1 31.624 117 80 0 12 128 384 500 1.78e-11 67.4
Msa0451740 AT4G08320.1 35.043 117 75 1 11 126 175 291 9.80e-15 77.0
Msa0451740 AT1G56440.2 37.500 120 74 1 15 134 78 196 1.34e-14 76.6
Msa0451740 AT1G56440.1 37.500 120 74 1 15 134 88 206 1.39e-14 76.6
Msa0451740 AT4G12400.1 40.196 102 61 0 11 112 2 103 3.59e-14 75.5
Msa0451740 AT4G12400.1 30.508 118 82 0 11 128 369 486 3.21e-11 66.2
Msa0451740 AT1G04190.1 35.833 120 76 1 2 120 5 124 3.65e-14 74.3
Msa0451740 AT4G12400.2 40.196 102 61 0 11 112 2 103 3.84e-14 75.5
Msa0451740 AT4G12400.2 30.508 118 82 0 11 128 369 486 3.41e-11 66.2
Msa0451740 AT4G22670.1 43.000 100 56 1 3 102 116 214 1.32e-13 73.6
Msa0451740 AT4G23570.1 30.282 142 93 2 33 168 24 165 1.27e-12 69.7
Msa0451740 AT4G23570.2 30.282 142 93 2 33 168 24 165 1.27e-12 69.7
Msa0451740 AT3G58620.2 26.446 121 89 0 6 126 444 564 2.97e-12 69.7
Msa0451740 AT3G14950.1 35.000 120 76 1 12 131 259 376 3.31e-12 69.7
Msa0451740 AT3G58620.1 26.446 121 89 0 6 126 444 564 4.19e-12 69.3
Msa0451740 AT1G53300.1 33.051 118 77 1 11 128 227 342 9.14e-12 68.2
Msa0451740 AT5G65160.1 29.508 122 86 0 13 134 472 593 2.20e-11 67.0
Msa0451740 AT2G42580.1 30.328 122 83 2 7 128 216 335 2.53e-11 67.0
Msa0451740 AT4G23570.3 30.070 143 93 3 33 168 24 166 2.59e-11 65.9
Msa0451740 AT5G10090.1 29.204 113 80 0 18 130 478 590 2.69e-11 66.6

Find 148 sgRNAs with CRISPR-Local

Find 619 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAGAACCTTTGAATATTT+AGG 0.215738 3_3:-40197389 None:intergenic
GTTACCTGATCACAGTAATT+TGG 0.220828 3_3:-40204208 None:intergenic
TTTAGGATGCATTTGGAAAT+TGG 0.227878 3_3:+40205275 Msa0451740:three_prime_UTR
TTGGTCTGCTGTTGGTCCTT+GGG 0.246842 3_3:+40201363 Msa0451740:CDS
TTCAATTTCTTTGTTGCATC+AGG 0.258423 3_3:-40199767 None:intergenic
CGCTTGCTAGGTCCTCTTCC+AGG 0.271139 3_3:-40203968 None:intergenic
GTTGGTCTGCTGTTGGTCCT+TGG 0.283017 3_3:+40201362 Msa0451740:CDS
CGGTGCTGCTCATCTTGGGC+TGG 0.287475 3_3:+40197516 Msa0451740:CDS
TTGAAGAAGTGATTGTTATT+AGG 0.288896 3_3:+40195765 Msa0451740:five_prime_UTR
TTCTTGAAGGATAATAATTT+AGG 0.289596 3_3:+40204031 Msa0451740:CDS
GAAAATCCATATCTATTTAA+TGG 0.291516 3_3:+40203219 Msa0451740:CDS
GATAGATTTATTTGAAGTTT+AGG 0.299108 3_3:+40205258 Msa0451740:three_prime_UTR
AGGCGCGGTGCTGCTCATCT+TGG 0.303491 3_3:+40197511 Msa0451740:CDS
AGAAGGGGATACTATTACTT+TGG 0.310255 3_3:+40202292 Msa0451740:CDS
TTTGTTGCATCAGGATCATT+TGG 0.332421 3_3:-40199758 None:intergenic
GTAATGTTGGGTTTCAAATC+AGG 0.336999 3_3:-40204408 None:intergenic
TTTGAAGTTTAGGATGCATT+TGG 0.343201 3_3:+40205268 Msa0451740:three_prime_UTR
TATTCAGGAGCAAGAATAGA+AGG 0.343533 3_3:+40202275 Msa0451740:CDS
ACCTATTGAACGGAAATCTA+TGG 0.344050 3_3:-40199873 None:intergenic
TGCTGTTGGTCCTTGGGGCA+TGG 0.350317 3_3:+40201369 Msa0451740:CDS
CTGAAATCCGATCAATTAAT+CGG 0.356487 3_3:+40203783 Msa0451740:CDS
CATCTTAGGCTCGAGGAATA+TGG 0.358933 3_3:+40197326 Msa0451740:CDS
AACAGAAGTGCTTGCATAAA+CGG 0.363037 3_3:+40202348 Msa0451740:CDS
GATGTCGAGCCACAGTATTC+AGG 0.365324 3_3:+40202260 Msa0451740:intron
AAATCTATGGATTCAGCTAT+TGG 0.370862 3_3:-40199860 None:intergenic
GCTGCAATACTGGTACATTT+AGG 0.373922 3_3:+40201399 Msa0451740:CDS
ACACAAGCAATTGAGCTAAA+TGG 0.386922 3_3:+40197266 Msa0451740:CDS
TCTATTTAATGGTGACTTTG+TGG 0.389007 3_3:+40203230 Msa0451740:CDS
CCTCTTCCAGGGAGAGGTTG+TGG 0.389634 3_3:-40203956 None:intergenic
GGCGCGGTGCTGCTCATCTT+GGG 0.390972 3_3:+40197512 Msa0451740:CDS
AGTATTCTGCTGTTTACCTT+TGG 0.392555 3_3:+40203691 Msa0451740:CDS
TCCATAGATTTCCGTTCAAT+AGG 0.396664 3_3:+40199872 Msa0451740:CDS
AAAACAAAATGTTGCCCTTA+GGG 0.399748 3_3:-40204982 None:intergenic
CAAAACAAAATGTTGCCCTT+AGG 0.402171 3_3:-40204983 None:intergenic
CGTGGTGTAGGCCTTTCTTT+CGG 0.405811 3_3:+40203989 Msa0451740:CDS
AACATTTGTTGAACTATTTG+CGG 0.408597 3_3:+40203667 Msa0451740:CDS
AAGTCACCATTAAATAGATA+TGG 0.408912 3_3:-40203225 None:intergenic
TGCTCCAAATTACTGTGATC+AGG 0.411289 3_3:+40204204 Msa0451740:CDS
GCGTGAGGGAGCGCTGGAGG+CGG 0.416275 3_3:-40195823 None:intergenic
AAGAGCATGAACAAGATATA+TGG 0.417540 3_3:+40203611 Msa0451740:CDS
CTTTGCTATGTCTTCCGCAC+GGG 0.418156 3_3:-40195735 None:intergenic
AATGGTGACTTTGTGGATAG+AGG 0.418839 3_3:+40203237 Msa0451740:CDS
CGTGAGGGAGCGCTGGAGGC+GGG 0.418913 3_3:-40195822 None:intergenic
AGCAGTGACAGTAGCAGTTA+TGG 0.421990 3_3:+40201283 Msa0451740:CDS
AGGAAAGCGCCGCAATTCTT+CGG 0.427163 3_3:+40201238 Msa0451740:intron
TGGTGGAGTAGCTGCAATAC+TGG 0.427651 3_3:+40201389 Msa0451740:CDS
AGGCGCTTCAAATCGAATAA+AGG 0.429523 3_3:-40204388 None:intergenic
TAAGCCATTGGCTTAACATC+AGG 0.430731 3_3:-40204856 None:intergenic
TGAGCTCAACGGGCTGCCTT+CGG 0.437951 3_3:+40203194 Msa0451740:CDS
GGTGCTGCTCATCTTGGGCT+GGG 0.441669 3_3:+40197517 Msa0451740:CDS
TCGGTGGGGATGTTACAAAA+AGG 0.445680 3_3:+40204008 Msa0451740:CDS
GTGTAGGCCTTTCTTTCGGT+GGG 0.447700 3_3:+40203993 Msa0451740:CDS
AGTAAAGGACGAGGGTTATG+AGG 0.450555 3_3:+40204147 Msa0451740:CDS
TCTTGGGCTGGGAAAATTCA+AGG 0.456210 3_3:+40197528 Msa0451740:CDS
ATATTGATTATGAGAACATT+CGG 0.457850 3_3:-40204894 None:intergenic
GGTTGATGTGTGAGTTGCTA+TGG 0.470365 3_3:+40203927 Msa0451740:CDS
CACAAAACCGATTAATTGAT+CGG 0.472508 3_3:-40203790 None:intergenic
CTGTGCATCTATACCTTCCT+CGG 0.477051 3_3:-40203819 None:intergenic
GGATTTCGTAAAGAAAATGA+TGG 0.477932 3_3:+40202313 Msa0451740:CDS
TGGAATAGTGAGAGGATGTT+GGG 0.481054 3_3:-40195799 None:intergenic
CATTACTACATTTGCAGCAG+TGG 0.484793 3_3:+40204425 Msa0451740:CDS
CAGTGGTGGTCATGTTGGTC+AGG 0.491022 3_3:+40201306 Msa0451740:CDS
ATTGGACGCTTCACCGATCC+TGG 0.495364 3_3:-40199842 None:intergenic
TAACATCCCCACCGAAAGAA+AGG 0.498215 3_3:-40204000 None:intergenic
CTAGGTCCTCTTCCAGGGAG+AGG 0.499390 3_3:-40203962 None:intergenic
AATTGTGGTTGGTCTGCTGT+TGG 0.499758 3_3:+40201355 Msa0451740:CDS
GGTGTAGGCCTTTCTTTCGG+TGG 0.499934 3_3:+40203992 Msa0451740:CDS
AGGCCTACACCACGCTTGCT+AGG 0.500648 3_3:-40203980 None:intergenic
GTGGAATAGTGAGAGGATGT+TGG 0.503102 3_3:-40195800 None:intergenic
TGGTCTGCTGTTGGTCCTTG+GGG 0.503725 3_3:+40201364 Msa0451740:CDS
TGATGCAACAAAGAAATTGA+AGG 0.507056 3_3:+40199769 Msa0451740:CDS
GAGGGAGCGCTGGAGGCGGG+TGG 0.510264 3_3:-40195819 None:intergenic
TGTTGTTATAGGGTTACTAC+AGG 0.511176 3_3:+40197491 Msa0451740:intron
GGCGTGGCGTGAGGGAGCGC+TGG 0.511463 3_3:-40195829 None:intergenic
CACAATTGTAGCTACTATTG+TGG 0.513387 3_3:-40201339 None:intergenic
TGCTGCAAATGTAGTAATGT+TGG 0.520819 3_3:-40204421 None:intergenic
TTCAAAGCAGCACCATCCAT+TGG 0.523343 3_3:-40204943 None:intergenic
TTGTGGTGATGTGCATGGTC+AGG 0.523684 3_3:+40202559 Msa0451740:CDS
CACTGCTGCTATGGCAACTT+CGG 0.523744 3_3:-40201267 None:intergenic
TTTAAGTGCATGTCTCCATC+AGG 0.524892 3_3:+40203297 Msa0451740:CDS
CCACAACCTCTCCCTGGAAG+AGG 0.528098 3_3:+40203956 Msa0451740:CDS
GTGTATATAGATCAATTGCA+TGG 0.529659 3_3:-40197247 None:intergenic
TGCTACTGTCACTGCTGCTA+TGG 0.532576 3_3:-40201276 None:intergenic
AGTGATCCACAACCTCTCCC+TGG 0.533336 3_3:+40203950 Msa0451740:CDS
GAAGAAGCTATTTCTGTACC+AGG 0.536670 3_3:+40199824 Msa0451740:CDS
GGACCTAGCAAGCGTGGTGT+AGG 0.541640 3_3:+40203977 Msa0451740:CDS
TGTGCATCTATACCTTCCTC+GGG 0.542452 3_3:-40203818 None:intergenic
AAGTTGTTTGCATAAGCCAT+TGG 0.542638 3_3:-40204868 None:intergenic
GTGGCGTGAGGGAGCGCTGG+AGG 0.543730 3_3:-40195826 None:intergenic
AGCTATTTCTGTACCAGGAT+CGG 0.552634 3_3:+40199829 Msa0451740:CDS
GCTGCTATGGCAACTTCGGT+TGG 0.553389 3_3:-40201263 None:intergenic
ATCGTGCCTTTGCACATCTT+AGG 0.554055 3_3:+40197312 Msa0451740:CDS
ACTTTGCTATGTCTTCCGCA+CGG 0.555086 3_3:-40195736 None:intergenic
GCTGCAAATGTAGTAATGTT+GGG 0.558396 3_3:-40204420 None:intergenic
TATGGCAGTGGTGGTCATGT+TGG 0.558913 3_3:+40201301 Msa0451740:CDS
CTTTGAATGCTTCATTAGCA+AGG 0.559030 3_3:-40196865 None:intergenic
ACTGTTTGTGGTGATGTGCA+TGG 0.560392 3_3:+40202554 Msa0451740:CDS
ATTCAGGAGCAAGAATAGAA+GGG 0.564418 3_3:+40202276 Msa0451740:CDS
TCAAAATAGTACCTATTGAA+CGG 0.564875 3_3:-40199883 None:intergenic
ACAGTTATGTCGACAAGAGA+AGG 0.566155 3_3:-40202512 None:intergenic
GCTTGCTAGGTCCTCTTCCA+GGG 0.567459 3_3:-40203967 None:intergenic
TGTGCGATCTCATGAAGTAA+AGG 0.569085 3_3:+40204132 Msa0451740:CDS
ATCTCATGAAGTAAAGGACG+AGG 0.570634 3_3:+40204138 Msa0451740:CDS
ATAGTAGCTACAATTGTGGT+TGG 0.570813 3_3:+40201344 Msa0451740:CDS
CTTGCTAATGAAGCATTCAA+AGG 0.570823 3_3:+40196866 Msa0451740:CDS
AGTTGATCCTAAATATTCAA+AGG 0.571712 3_3:+40197382 Msa0451740:CDS
TCGTTTATCACATGAGCCAA+AGG 0.573998 3_3:-40203707 None:intergenic
GACAGTAGCAGTTATGGCAG+TGG 0.575800 3_3:+40201289 Msa0451740:CDS
CGGTTGGCACCGAAGAATTG+CGG 0.579866 3_3:-40201247 None:intergenic
GATTTACCGGCGTGGCGTGA+GGG 0.581572 3_3:-40195837 None:intergenic
TGCGGAAGACATAGCAAAGT+GGG 0.583428 3_3:+40195739 Msa0451740:five_prime_UTR
TAGAAATCTAGAACTGCCAA+TGG 0.591162 3_3:+40204927 Msa0451740:three_prime_UTR
GTCGACATAACTGTTCCTCA+TGG 0.591645 3_3:+40202521 Msa0451740:CDS
CACAATAGTAGCTACAATTG+TGG 0.593440 3_3:+40201340 Msa0451740:CDS
AATCTAGAACTGCCAATGGA+TGG 0.595459 3_3:+40204931 Msa0451740:three_prime_UTR
TGTATATAGATCAATTGCAT+GGG 0.597547 3_3:-40197246 None:intergenic
TGTAGGCCTTTCTTTCGGTG+GGG 0.598927 3_3:+40203994 Msa0451740:CDS
TTTGCTATGTCTTCCGCACG+GGG 0.602574 3_3:-40195734 None:intergenic
AGGAGTCATTTACAAGACCT+AGG 0.603805 3_3:+40201419 Msa0451740:CDS
AGATTTACCGGCGTGGCGTG+AGG 0.604231 3_3:-40195838 None:intergenic
CTCGAGCCTAAGATGTGCAA+AGG 0.604486 3_3:-40197318 None:intergenic
TTCAGGAGCAAGAATAGAAG+GGG 0.604663 3_3:+40202277 Msa0451740:CDS
ACACCCTGATGTTAAGCCAA+TGG 0.605052 3_3:+40204852 Msa0451740:CDS
ATTCTTGCTCCTGAATACTG+TGG 0.606734 3_3:-40202269 None:intergenic
AAGCCATTGGCTTAACATCA+GGG 0.608784 3_3:-40204855 None:intergenic
TCAGCTATATATCTAGCTAG+AGG 0.610124 3_3:+40203575 Msa0451740:intron
AGTAGCAGTTATGGCAGTGG+TGG 0.612655 3_3:+40201292 Msa0451740:CDS
TGTTGGTCCTTGGGGCATGG+TGG 0.613632 3_3:+40201372 Msa0451740:CDS
CTTTGCACATCTTAGGCTCG+AGG 0.615129 3_3:+40197319 Msa0451740:CDS
AGCGCTCCCTCACGCCACGC+CGG 0.615215 3_3:+40195831 Msa0451740:five_prime_UTR
GGAAGAGGACCTAGCAAGCG+TGG 0.624373 3_3:+40203971 Msa0451740:CDS
ACTTAAATGCAAACAAAGTG+AGG 0.624984 3_3:-40203281 None:intergenic
TGCAATACTAGATGCTACAA+AGG 0.625792 3_3:+40197352 Msa0451740:CDS
AGCTACTCCACCATGCCCCA+AGG 0.628173 3_3:-40201379 None:intergenic
ATTGGCTTAACATCAGGGTG+TGG 0.628926 3_3:-40204850 None:intergenic
TGAAGAGAATAATGTCGCAA+AGG 0.629106 3_3:+40196826 Msa0451740:CDS
GTGCAAAGGCACGATTAGCA+AGG 0.640637 3_3:-40197304 None:intergenic
GCATCTATACCTTCCTCGGG+AGG 0.641409 3_3:-40203815 None:intergenic
TTTCTGTAGATGGGTAACAA+AGG 0.644956 3_3:+40204363 Msa0451740:intron
TTATAGGGTTACTACAGGCG+CGG 0.649400 3_3:+40197496 Msa0451740:intron
GTGCGGAAGACATAGCAAAG+TGG 0.650416 3_3:+40195738 Msa0451740:five_prime_UTR
GAGGCGGGTGGAATAGTGAG+AGG 0.651717 3_3:-40195807 None:intergenic
GGTTATGAGGTTGATCATGA+CGG 0.656315 3_3:+40204160 Msa0451740:CDS
GTAGCTGGTTGATTATTGCG+AGG 0.666429 3_3:+40196734 Msa0451740:intron
GAGAGAGAGATTTACCGGCG+TGG 0.675170 3_3:-40195845 None:intergenic
TTGATTATGAGAACATTCGG+AGG 0.701317 3_3:-40204891 None:intergenic
TCTCATGAAGTAAAGGACGA+GGG 0.727443 3_3:+40204139 Msa0451740:CDS
GTGTGACGCTTAGCCCCGTG+CGG 0.743336 3_3:+40195721 Msa0451740:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAATAATTAAA+AGG + chr3_3:40200926-40200945 Msa0451740:intron 0.0%
!!! TATTTTATTAGAATATCTAA+AGG - chr3_3:40198078-40198097 None:intergenic 10.0%
!! TAGATATTCTAATAAAATAT+AGG + chr3_3:40198079-40198098 Msa0451740:intron 10.0%
!!! ATAATCAATATGAATTTTTA+GGG + chr3_3:40198527-40198546 Msa0451740:intron 10.0%
!! TTATTCATATTTACTTAAAT+AGG + chr3_3:40198701-40198720 Msa0451740:intron 10.0%
!!! TTTTCTAAATTCTAATATTA+AGG + chr3_3:40201760-40201779 Msa0451740:intron 10.0%
!!! ATATTTTCTTTATTTGTTTA+CGG - chr3_3:40201876-40201895 None:intergenic 10.0%
!!! TTTAAAATAAAAATTCAACA+CGG - chr3_3:40202829-40202848 None:intergenic 10.0%
!!! GTTTTAATAAAAAATGAAAA+GGG + chr3_3:40204497-40204516 Msa0451740:intron 10.0%
!!! TTTTGTTTTGTATAATATTT+TGG + chr3_3:40204996-40205015 Msa0451740:intron 10.0%
!! TACAAAAAACAAAACTAAAA+AGG - chr3_3:40196040-40196059 None:intergenic 15.0%
!!! AAAAACAAAACTTTTGAAAA+GGG - chr3_3:40196086-40196105 None:intergenic 15.0%
!!! AAAAAACAAAACTTTTGAAA+AGG - chr3_3:40196087-40196106 None:intergenic 15.0%
!!! ACAGTTAATTTTAGTATTTT+TGG + chr3_3:40197798-40197817 Msa0451740:intron 15.0%
!! AAAAAAAGAGAAAATATCAA+AGG + chr3_3:40197943-40197962 Msa0451740:intron 15.0%
!! GTGATGTATAAATAAAATAA+CGG + chr3_3:40197999-40198018 Msa0451740:intron 15.0%
!! AAAATGATTATAACGTTTAT+TGG + chr3_3:40198156-40198175 Msa0451740:intron 15.0%
!! CATTACTTATTTAAAGATAT+AGG - chr3_3:40198448-40198467 None:intergenic 15.0%
!!! GATAATCAATATGAATTTTT+AGG + chr3_3:40198526-40198545 Msa0451740:intron 15.0%
!! AGAAATGAAAGTTTAAAAAA+AGG + chr3_3:40199055-40199074 Msa0451740:intron 15.0%
!!! TAATTTAGATGTTACTTTTA+CGG - chr3_3:40199267-40199286 None:intergenic 15.0%
!! CTAAACAAAAAAATAAAACA+AGG - chr3_3:40199658-40199677 None:intergenic 15.0%
!!! TTATAACTTTTTGTATGTTT+TGG + chr3_3:40200017-40200036 Msa0451740:intron 15.0%
!! AAAAGAAAAAAATTCAAACA+AGG - chr3_3:40201940-40201959 None:intergenic 15.0%
!!! TGTTAATTTTATATTGTCAA+TGG + chr3_3:40202135-40202154 Msa0451740:intron 15.0%
!! TTTGTTACATAAATATTTAG+AGG + chr3_3:40202643-40202662 Msa0451740:intron 15.0%
!! CATCAAAAATAAAATTGAAA+GGG - chr3_3:40203141-40203160 None:intergenic 15.0%
!! TCATCAAAAATAAAATTGAA+AGG - chr3_3:40203142-40203161 None:intergenic 15.0%
!! ATATATAGCTGAAAATAATA+TGG - chr3_3:40203567-40203586 None:intergenic 15.0%
!! TTTGTTAATGTATATATGTT+CGG + chr3_3:40203895-40203914 Msa0451740:intron 15.0%
!! ATAAAATTATTCAAGAAAGA+AGG - chr3_3:40204253-40204272 None:intergenic 15.0%
!!! TTCTTTCTTGAATAATTTTA+TGG + chr3_3:40204252-40204271 Msa0451740:intron 15.0%
!!! CGTTTTAATAAAAAATGAAA+AGG + chr3_3:40204496-40204515 Msa0451740:intron 15.0%
!! AATTGAATAATCCATTGTTA+GGG - chr3_3:40195960-40195979 None:intergenic 20.0%
!! AAATTGAATAATCCATTGTT+AGG - chr3_3:40195961-40195980 None:intergenic 20.0%
!!! GTTTTGGTTTTATTATTGTT+TGG + chr3_3:40196169-40196188 Msa0451740:intron 20.0%
!! GTAATTTGATTACAATGATT+AGG + chr3_3:40196262-40196281 Msa0451740:intron 20.0%
!! TTATGAGTAATGATGAATTA+AGG + chr3_3:40196514-40196533 Msa0451740:intron 20.0%
!!! CACTTTATTTTTTCTAAGAT+TGG + chr3_3:40196644-40196663 Msa0451740:intron 20.0%
!!! TAACAACAAAAAAGCATAAT+TGG - chr3_3:40197479-40197498 None:intergenic 20.0%
!!! TTATGCTTTTTTGTTGTTAT+AGG + chr3_3:40197480-40197499 Msa0451740:intron 20.0%
!!! TATGCTTTTTTGTTGTTATA+GGG + chr3_3:40197481-40197500 Msa0451740:intron 20.0%
!! TTGTATTAGTATTGCATTAT+TGG + chr3_3:40197649-40197668 Msa0451740:intron 20.0%
!!! TCTCTTGACATTTTTAAAAA+CGG - chr3_3:40197971-40197990 None:intergenic 20.0%
!!! TGTATAAATAAAATAACGGA+AGG + chr3_3:40198003-40198022 Msa0451740:intron 20.0%
!!! GTATAAATAAAATAACGGAA+GGG + chr3_3:40198004-40198023 Msa0451740:intron 20.0%
!! TTATTAGAATATCTAAAGGA+AGG - chr3_3:40198074-40198093 None:intergenic 20.0%
!! TAACTTGACACAAATTAAAA+AGG - chr3_3:40199133-40199152 None:intergenic 20.0%
!!! AAAACATTTGATAACATACA+TGG - chr3_3:40199208-40199227 None:intergenic 20.0%
!!! ATCATTTTTATCTAAGATTG+TGG + chr3_3:40199330-40199349 Msa0451740:intron 20.0%
!! GTAGTAAATCATTTAATGAT+TGG + chr3_3:40199408-40199427 Msa0451740:intron 20.0%
!! GTAATACTTGTTTAAATTGA+TGG + chr3_3:40199430-40199449 Msa0451740:intron 20.0%
!!! TCTTGATATTTCTGTTTTAT+TGG + chr3_3:40199565-40199584 Msa0451740:intron 20.0%
!! CTTAAACTATATTCCAAATA+AGG - chr3_3:40199593-40199612 None:intergenic 20.0%
!! ACATACAAAAAGTTATAACA+TGG - chr3_3:40200015-40200034 None:intergenic 20.0%
!!! TATATTGATGCATGTTTTTA+AGG + chr3_3:40200130-40200149 Msa0451740:intron 20.0%
!!! ACTTTTCAACAATAAAGTTA+TGG + chr3_3:40200200-40200219 Msa0451740:intron 20.0%
!!! CAGTTATTTTATATGAACTT+TGG + chr3_3:40200475-40200494 Msa0451740:intron 20.0%
!!! TATTGAATTAACTTGATACT+TGG + chr3_3:40200760-40200779 Msa0451740:intron 20.0%
!! CAAAAATCTCAAATGAATAT+AGG - chr3_3:40201496-40201515 None:intergenic 20.0%
!! AATTCTAATATTAAGGATAG+TGG + chr3_3:40201767-40201786 Msa0451740:intron 20.0%
!! ATTCTAATATTAAGGATAGT+GGG + chr3_3:40201768-40201787 Msa0451740:intron 20.0%
!!! ATTTTATCTAAAACTGAAAG+AGG + chr3_3:40201825-40201844 Msa0451740:intron 20.0%
!! TAAAGAAAATATGTATGTTG+TGG + chr3_3:40201884-40201903 Msa0451740:intron 20.0%
!!! TTTTGATTTTAATTACTACC+TGG + chr3_3:40201958-40201977 Msa0451740:intron 20.0%
!!! GTTGCTTATGTATTTTTTAT+AGG + chr3_3:40202020-40202039 Msa0451740:intron 20.0%
!!! GTATTTTTTATAGGTGTATT+CGG + chr3_3:40202029-40202048 Msa0451740:intron 20.0%
!! AAAATCATTAATACTAAAGC+GGG - chr3_3:40202096-40202115 None:intergenic 20.0%
!! GAAAATCATTAATACTAAAG+CGG - chr3_3:40202097-40202116 None:intergenic 20.0%
!!! CTTTAGTATTAATGATTTTC+AGG + chr3_3:40202097-40202116 Msa0451740:intron 20.0%
!! AACACAAAATAGACAAAAAA+TGG - chr3_3:40202177-40202196 None:intergenic 20.0%
!!! CATGAAAATCATGATTTTAT+AGG - chr3_3:40203076-40203095 None:intergenic 20.0%
!! GAAAATCCATATCTATTTAA+TGG + chr3_3:40203219-40203238 Msa0451740:CDS 20.0%
!!! ATACTATTTTTGATACATCA+TGG + chr3_3:40203361-40203380 Msa0451740:intron 20.0%
!! AATCACACAATAAACATTAT+TGG - chr3_3:40203470-40203489 None:intergenic 20.0%
!! TTCTTGAAGGATAATAATTT+AGG + chr3_3:40204031-40204050 Msa0451740:CDS 20.0%
!!! TAGCTTAAAATGTTGAATTT+TGG + chr3_3:40204640-40204659 Msa0451740:intron 20.0%
!!! AGCTTAAAATGTTGAATTTT+GGG + chr3_3:40204641-40204660 Msa0451740:intron 20.0%
!!! ATATTGATTATGAGAACATT+CGG - chr3_3:40204897-40204916 None:intergenic 20.0%
!!! TTTGTACTTTTTGTTTCTTT+TGG + chr3_3:40205072-40205091 Msa0451740:intron 20.0%
!! ATCAAATCAACAAAAATTCT+TGG - chr3_3:40205227-40205246 None:intergenic 20.0%
!!! GTTGATTTGATTTCATTTTT+TGG + chr3_3:40205236-40205255 Msa0451740:three_prime_UTR 20.0%
!!! GATAGATTTATTTGAAGTTT+AGG + chr3_3:40205258-40205277 Msa0451740:three_prime_UTR 20.0%
!! TTGAAGAAGTGATTGTTATT+AGG + chr3_3:40195765-40195784 Msa0451740:five_prime_UTR 25.0%
!! ATATTCTAAAAGACAGTGTT+TGG + chr3_3:40196012-40196031 Msa0451740:intron 25.0%
! TATCCTTAAATTTCTGTTTC+AGG - chr3_3:40196063-40196082 None:intergenic 25.0%
!!! AAGTTTTGTTTTTTTGCTGT+TGG + chr3_3:40196093-40196112 Msa0451740:intron 25.0%
!!! AGTTTTGTTTTTTTGCTGTT+GGG + chr3_3:40196094-40196113 Msa0451740:intron 25.0%
!!! ATGTTGTTGTTGATAATGAT+AGG + chr3_3:40196235-40196254 Msa0451740:intron 25.0%
!!! TGTTGTTGTTGATAATGATA+GGG + chr3_3:40196236-40196255 Msa0451740:intron 25.0%
!!! ATTCTTTCCATTTGTTTTTC+TGG + chr3_3:40196603-40196622 Msa0451740:intron 25.0%
!!! TTTTTCTGTTTTATTGTAGC+TGG + chr3_3:40196719-40196738 Msa0451740:intron 25.0%
! ACACTTTCATACTTAATTGT+TGG + chr3_3:40197020-40197039 Msa0451740:intron 25.0%
!!! AATGAAAGTGTTAAAGCAAT+AGG - chr3_3:40197176-40197195 None:intergenic 25.0%
! TGTATATAGATCAATTGCAT+GGG - chr3_3:40197249-40197268 None:intergenic 25.0%
! AGTTGATCCTAAATATTCAA+AGG + chr3_3:40197382-40197401 Msa0451740:CDS 25.0%
! TAGAGAACCTTTGAATATTT+AGG - chr3_3:40197392-40197411 None:intergenic 25.0%
! TTAATGATAGCTGAATATAG+AGG - chr3_3:40197438-40197457 None:intergenic 25.0%
! TATCTATATGCCTAATGAAA+AGG - chr3_3:40197702-40197721 None:intergenic 25.0%
! TGATAGAATGTAAATCTTTG+AGG - chr3_3:40198041-40198060 None:intergenic 25.0%
! AAGATTTACATTCTATCATC+AGG + chr3_3:40198043-40198062 Msa0451740:intron 25.0%
! AGATTTACATTCTATCATCA+GGG + chr3_3:40198044-40198063 Msa0451740:intron 25.0%
! GATTATAACGTTTATTGGAA+AGG + chr3_3:40198161-40198180 Msa0451740:intron 25.0%
! TCAATGAAATCAATATTTCG+AGG + chr3_3:40198202-40198221 Msa0451740:intron 25.0%
! TCATATTTACTTAAATAGGC+CGG + chr3_3:40198705-40198724 Msa0451740:intron 25.0%
!! AGAAACCTATTTAGCTTAAA+AGG - chr3_3:40198773-40198792 None:intergenic 25.0%
!! TGGCAGTTTTTAAACTTAAT+GGG - chr3_3:40198961-40198980 None:intergenic 25.0%
!! ATGGCAGTTTTTAAACTTAA+TGG - chr3_3:40198962-40198981 None:intergenic 25.0%
! TAAGTTTAAAAACTGCCATT+AGG + chr3_3:40198963-40198982 Msa0451740:intron 25.0%
!!! CATTTCTAGAGTTAAAAAGT+GGG - chr3_3:40199042-40199061 None:intergenic 25.0%
!!! TCATTTCTAGAGTTAAAAAG+TGG - chr3_3:40199043-40199062 None:intergenic 25.0%
! TTTAAAAACGTCAACAATGT+TGG + chr3_3:40199163-40199182 Msa0451740:intron 25.0%
! CATGTGAGAACATTTAAATA+AGG - chr3_3:40199483-40199502 None:intergenic 25.0%
!!! TGTTTTATTGGTACCTTATT+TGG + chr3_3:40199577-40199596 Msa0451740:intron 25.0%
! GTAAAACCTAAATTAGAGTT+CGG - chr3_3:40199616-40199635 None:intergenic 25.0%
! TCAAAATAGTACCTATTGAA+CGG - chr3_3:40199886-40199905 None:intergenic 25.0%
!! TTTTTCACATCAATGATATC+AGG - chr3_3:40200158-40200177 None:intergenic 25.0%
!! TCTTTTGGCAAAATTTGAAT+TGG + chr3_3:40200390-40200409 Msa0451740:intron 25.0%
! GTAGAATAAAGTTTAAGCAT+CGG - chr3_3:40200681-40200700 None:intergenic 25.0%
!!! TTCCATTTTAGTTGACATAT+TGG - chr3_3:40200790-40200809 None:intergenic 25.0%
! AAATGGAAAACACTAACAAA+TGG + chr3_3:40200802-40200821 Msa0451740:intron 25.0%
! TAAACAACCAATTAAAAGGA+AGG - chr3_3:40200884-40200903 None:intergenic 25.0%
! CATGTAAACAACCAATTAAA+AGG - chr3_3:40200888-40200907 None:intergenic 25.0%
! TCAACAAATAGGTGATAAAA+AGG - chr3_3:40201035-40201054 None:intergenic 25.0%
! TATCACTCTTGTATCATTAT+AGG + chr3_3:40201218-40201237 Msa0451740:intron 25.0%
! ACCTAAAACCAATTAATCAT+AGG + chr3_3:40201461-40201480 Msa0451740:intron 25.0%
!!! TCCTATGATTAATTGGTTTT+AGG - chr3_3:40201465-40201484 None:intergenic 25.0%
! AAAACCAATTAATCATAGGA+TGG + chr3_3:40201465-40201484 Msa0451740:intron 25.0%
! TGCAACACATTTCTTTATAT+TGG + chr3_3:40201573-40201592 Msa0451740:intron 25.0%
!!! ATTTTAATTACTACCTGGAT+TGG + chr3_3:40201963-40201982 Msa0451740:intron 25.0%
! AAATCATTAATACTAAAGCG+GGG - chr3_3:40202095-40202114 None:intergenic 25.0%
!!! AAAAATGGTTCTGACTATTA+GGG - chr3_3:40202162-40202181 None:intergenic 25.0%
!!! AAAAAATGGTTCTGACTATT+AGG - chr3_3:40202163-40202182 None:intergenic 25.0%
!! TCATGGACATGAAAATATTT+TGG + chr3_3:40202219-40202238 Msa0451740:intron 25.0%
!! CAGGTAATTGGTTTATTATA+TGG + chr3_3:40202578-40202597 Msa0451740:intron 25.0%
!! ATTTGTTGCTAATATCTTCA+AGG + chr3_3:40202614-40202633 Msa0451740:intron 25.0%
!! ATCATGATTTTCATGTTACT+CGG + chr3_3:40203081-40203100 Msa0451740:intron 25.0%
! AAGTCACCATTAAATAGATA+TGG - chr3_3:40203228-40203247 None:intergenic 25.0%
! ATAGTATAATGAAACCTAAC+AGG - chr3_3:40203348-40203367 None:intergenic 25.0%
! AATACATTAAGCATCTAATC+AGG - chr3_3:40203415-40203434 None:intergenic 25.0%
!!! AACAAGATATATGGTTTTGA+GGG + chr3_3:40203620-40203639 Msa0451740:CDS 25.0%
!! AACATTTGTTGAACTATTTG+CGG + chr3_3:40203667-40203686 Msa0451740:CDS 25.0%
! TTAACAAAACTACGATGAAA+TGG - chr3_3:40203883-40203902 None:intergenic 25.0%
!! ACATTAATATAAGAAGTGTG+TGG - chr3_3:40204287-40204306 None:intergenic 25.0%
! TATATAGATACATTCATAGG+AGG - chr3_3:40204328-40204347 None:intergenic 25.0%
! CAGTATATAGATACATTCAT+AGG - chr3_3:40204331-40204350 None:intergenic 25.0%
!! TTTTCATTGTTTTCTGTAGA+TGG + chr3_3:40204353-40204372 Msa0451740:intron 25.0%
!! TTTCATTGTTTTCTGTAGAT+GGG + chr3_3:40204354-40204373 Msa0451740:intron 25.0%
! AGAATCATGTTGTCAAATAT+CGG + chr3_3:40204523-40204542 Msa0451740:intron 25.0%
! ATATCTTCATTCAATTTGTG+AGG + chr3_3:40204772-40204791 Msa0451740:intron 25.0%
! ATTCAATTTGTGAGGTTATA+TGG + chr3_3:40204780-40204799 Msa0451740:intron 25.0%
!! ACAAAAAGTACAAAAGAAAG+TGG - chr3_3:40205066-40205085 None:intergenic 25.0%
!! GATTATGGTTTAGTTTAAAC+AGG + chr3_3:40205149-40205168 Msa0451740:intron 25.0%
! GTCAAACAAAGATAAGTAAA+AGG - chr3_3:40205205-40205224 None:intergenic 25.0%
TATGAAGAACAAGAAGATCT+AGG - chr3_3:40195915-40195934 None:intergenic 30.0%
GTACCTGAAACAGAAATTTA+AGG + chr3_3:40196057-40196076 Msa0451740:intron 30.0%
!!! TTTTGGTGGGTTAATTGTTT+TGG + chr3_3:40196153-40196172 Msa0451740:intron 30.0%
!!! GATTAGGTTTTAGATGTTTC+AGG + chr3_3:40196278-40196297 Msa0451740:intron 30.0%
ACTGACACATCAAATTGAAA+GGG - chr3_3:40196458-40196477 None:intergenic 30.0%
TAAGTCACAGTAATAACAGT+AGG - chr3_3:40196497-40196516 None:intergenic 30.0%
TGAGTAATGATGAATTAAGG+AGG + chr3_3:40196517-40196536 Msa0451740:intron 30.0%
GATAAAGCCAGAAAAACAAA+TGG - chr3_3:40196613-40196632 None:intergenic 30.0%
! ATATAGATTCTTTTCTGAGC+TGG + chr3_3:40196676-40196695 Msa0451740:intron 30.0%
CAAAAAAGCTTCATCTGAAA+TGG + chr3_3:40196799-40196818 Msa0451740:exon 30.0%
TAAGAAAGAGAGACTATGAA+TGG + chr3_3:40197138-40197157 Msa0451740:intron 30.0%
! TTCTGAAAAAAGGAATTCAC+AGG - chr3_3:40197216-40197235 None:intergenic 30.0%
!!! GTGAATTCCTTTTTTCAGAA+CGG + chr3_3:40197216-40197235 Msa0451740:intron 30.0%
!! CAAATTTCCGTTCTGAAAAA+AGG - chr3_3:40197226-40197245 None:intergenic 30.0%
GTGTATATAGATCAATTGCA+TGG - chr3_3:40197250-40197269 None:intergenic 30.0%
AAATGTCTGTTGTCTTAACA+AGG + chr3_3:40197592-40197611 Msa0451740:intron 30.0%
! ATGTTCATAGCCTTTTCATT+AGG + chr3_3:40197689-40197708 Msa0451740:intron 30.0%
TGGAGAAACTAACAATAAAC+AGG + chr3_3:40197818-40197837 Msa0451740:intron 30.0%
!!! ATATGCTCAGTAGTTTTTTC+TGG + chr3_3:40197858-40197877 Msa0451740:intron 30.0%
TCTGATATCAGTCCAAAAAA+GGG + chr3_3:40197881-40197900 Msa0451740:intron 30.0%
! TCTTTCTTTTCCTTCGTTAA+CGG - chr3_3:40197916-40197935 None:intergenic 30.0%
TTAAAAATGTCAAGAGAGTG+TGG + chr3_3:40197974-40197993 Msa0451740:intron 30.0%
! TAAATAAAATAACGGAAGGG+AGG + chr3_3:40198007-40198026 Msa0451740:intron 30.0%
GATTTACATTCTATCATCAG+GGG + chr3_3:40198045-40198064 Msa0451740:intron 30.0%
TATAACGTTTATTGGAAAGG+AGG + chr3_3:40198164-40198183 Msa0451740:intron 30.0%
ACTTGAGAAGAAGCAATTAT+AGG + chr3_3:40198235-40198254 Msa0451740:intron 30.0%
ATTTAAAGATATAGGCTAGC+AGG - chr3_3:40198440-40198459 None:intergenic 30.0%
TCTTCTATAATGATGCACTT+TGG - chr3_3:40198901-40198920 None:intergenic 30.0%
ATGTAATTTACCTCTTCGAA+TGG - chr3_3:40199237-40199256 None:intergenic 30.0%
! AATGATCAAGTTGCATTTGA+TGG - chr3_3:40199316-40199335 None:intergenic 30.0%
ACAAAGAATGTTTCATCACT+CGG - chr3_3:40199390-40199409 None:intergenic 30.0%
TTTAAGCCGAACTCTAATTT+AGG + chr3_3:40199607-40199626 Msa0451740:intron 30.0%
TGCTTACACTTATATTTACC+AGG + chr3_3:40199721-40199740 Msa0451740:intron 30.0%
TTCAATTTCTTTGTTGCATC+AGG - chr3_3:40199770-40199789 None:intergenic 30.0%
TGATGCAACAAAGAAATTGA+AGG + chr3_3:40199769-40199788 Msa0451740:CDS 30.0%
AAATCTATGGATTCAGCTAT+TGG - chr3_3:40199863-40199882 None:intergenic 30.0%
TATGAAATAACACCAACTCA+AGG - chr3_3:40200112-40200131 None:intergenic 30.0%
! AAAGTTATGGATGTGACTTT+TGG + chr3_3:40200213-40200232 Msa0451740:intron 30.0%
AAATGAACAGTGATCAAAGA+AGG - chr3_3:40200296-40200315 None:intergenic 30.0%
! TTGATCACTGTTCATTTTCA+CGG + chr3_3:40200299-40200318 Msa0451740:intron 30.0%
! TTTTTCGTTTGCATGTCTTT+TGG + chr3_3:40200375-40200394 Msa0451740:intron 30.0%
TTTGTAACTTTCCAAGTTCT+TGG + chr3_3:40200500-40200519 Msa0451740:intron 30.0%
ATTGAAAACGCATGATTTCA+AGG - chr3_3:40200540-40200559 None:intergenic 30.0%
TCAGAAAGATATGAAATGTG+AGG + chr3_3:40200565-40200584 Msa0451740:intron 30.0%
! GTTGCAATAACTAGATGTTT+TGG - chr3_3:40200655-40200674 None:intergenic 30.0%
!! AATAAAGTTTAAGCATCGGA+TGG - chr3_3:40200677-40200696 None:intergenic 30.0%
TTTCTATGTCATGGTTACTT+TGG - chr3_3:40200706-40200725 None:intergenic 30.0%
! GACATAAGTTTTCTATGTCA+TGG - chr3_3:40200715-40200734 None:intergenic 30.0%
GACCAATATGTCAACTAAAA+TGG + chr3_3:40200785-40200804 Msa0451740:intron 30.0%
! TACAGATTGTGTAACTTGTA+AGG - chr3_3:40200993-40201012 None:intergenic 30.0%
ACAAATAGGTGATAAAAAGG+TGG - chr3_3:40201032-40201051 None:intergenic 30.0%
!! AGGAAAATAACGGATGATTA+CGG - chr3_3:40201115-40201134 None:intergenic 30.0%
AAGGTTTGTGAGGAAAATAA+CGG - chr3_3:40201125-40201144 None:intergenic 30.0%
TGTTTGATAAGGTTATACCT+AGG - chr3_3:40201439-40201458 None:intergenic 30.0%
!!! GTTTTAGGTCTTGTTTGATA+AGG - chr3_3:40201450-40201469 None:intergenic 30.0%
!!! GATTTTTGAAACAAGTCAAG+TGG + chr3_3:40201508-40201527 Msa0451740:intron 30.0%
ATCATTATCAGTACTGCATT+AGG + chr3_3:40201532-40201551 Msa0451740:intron 30.0%
ATGTGTTTATTACCCTTCTT+AGG + chr3_3:40201675-40201694 Msa0451740:intron 30.0%
! TCATCCTATTTAGTTTCAGA+AGG - chr3_3:40201701-40201720 None:intergenic 30.0%
! GTACTTTTCAGTTTACTTGT+AGG + chr3_3:40201797-40201816 Msa0451740:intron 30.0%
AAAATTCAAACAAGGTTGCA+AGG - chr3_3:40201932-40201951 None:intergenic 30.0%
TAAGCAACAATCTTCCAAAT+AGG - chr3_3:40202008-40202027 None:intergenic 30.0%
ATAGGTGTATTCGGATTTAA+CGG + chr3_3:40202038-40202057 Msa0451740:intron 30.0%
AGTGAAATCAAATGCTACAA+GGG - chr3_3:40202200-40202219 None:intergenic 30.0%
GGATTTCGTAAAGAAAATGA+TGG + chr3_3:40202313-40202332 Msa0451740:CDS 30.0%
! ACAGTAAAATGTTTTCCATG+AGG - chr3_3:40202539-40202558 None:intergenic 30.0%
! GGAAAACATTTTACTGTTTG+TGG + chr3_3:40202542-40202561 Msa0451740:CDS 30.0%
GAATTTCTTTGACCATTATG+TGG + chr3_3:40202718-40202737 Msa0451740:intron 30.0%
TTAAATCCTTCGTACAAATG+AGG - chr3_3:40202803-40202822 None:intergenic 30.0%
CTTGTCAAACGTTAAAATGA+CGG - chr3_3:40202998-40203017 None:intergenic 30.0%
!! CTGAATATTTTTGAGCTCAA+CGG + chr3_3:40203183-40203202 Msa0451740:CDS 30.0%
!! TGAATATTTTTGAGCTCAAC+GGG + chr3_3:40203184-40203203 Msa0451740:CDS 30.0%
TCTATTTAATGGTGACTTTG+TGG + chr3_3:40203230-40203249 Msa0451740:CDS 30.0%
ACTTAAATGCAAACAAAGTG+AGG - chr3_3:40203284-40203303 None:intergenic 30.0%
! TCTTTCTTTATTAGCCTGTT+AGG + chr3_3:40203331-40203350 Msa0451740:intron 30.0%
! AAGAGCATGAACAAGATATA+TGG + chr3_3:40203611-40203630 Msa0451740:CDS 30.0%
!! GAACAAGATATATGGTTTTG+AGG + chr3_3:40203619-40203638 Msa0451740:CDS 30.0%
! ATAAAGTTTTCGTAGTCCAT+GGG + chr3_3:40203729-40203748 Msa0451740:CDS 30.0%
CTGAAATCCGATCAATTAAT+CGG + chr3_3:40203783-40203802 Msa0451740:CDS 30.0%
CACAAAACCGATTAATTGAT+CGG - chr3_3:40203793-40203812 None:intergenic 30.0%
TGTTACAAAAAGGTTCTTGA+AGG + chr3_3:40204018-40204037 Msa0451740:CDS 30.0%
! AATTTAGGTATGTTTTCCAC+TGG + chr3_3:40204046-40204065 Msa0451740:intron 30.0%
GAAATTAAATATCAGACCAG+TGG - chr3_3:40204065-40204084 None:intergenic 30.0%
GAAAGAAGGTTGTAACAAAA+GGG - chr3_3:40204239-40204258 None:intergenic 30.0%
AGAAAGAAGGTTGTAACAAA+AGG - chr3_3:40204240-40204259 None:intergenic 30.0%
TGACATACTTTCTTATTGGT+TGG + chr3_3:40204806-40204825 Msa0451740:intron 30.0%
AAAACAAAATGTTGCCCTTA+GGG - chr3_3:40204985-40205004 None:intergenic 30.0%
! CTTTTGGTAAACAAAGTGTA+AGG + chr3_3:40205088-40205107 Msa0451740:intron 30.0%
AAGGAAACTTGTATCTTCAT+TGG + chr3_3:40205107-40205126 Msa0451740:intron 30.0%
ATGAGACAAAGAAGTGATTA+TGG + chr3_3:40205134-40205153 Msa0451740:intron 30.0%
GTTTAAACAGGTTACATGAA+TGG + chr3_3:40205161-40205180 Msa0451740:intron 30.0%
! TTTGAAGTTTAGGATGCATT+TGG + chr3_3:40205268-40205287 Msa0451740:three_prime_UTR 30.0%
! TTTAGGATGCATTTGGAAAT+TGG + chr3_3:40205275-40205294 Msa0451740:three_prime_UTR 30.0%
CAAAAGCAACTGCATCAAAA+GGG - chr3_3:40196138-40196157 None:intergenic 35.0%
TGTTTGGTTAACAAACTCCA+AGG + chr3_3:40196185-40196204 Msa0451740:intron 35.0%
TTAACAAACTCCAAGGATGT+TGG + chr3_3:40196192-40196211 Msa0451740:intron 35.0%
TAACAAACTCCAAGGATGTT+GGG + chr3_3:40196193-40196212 Msa0451740:intron 35.0%
TCCTGTATGAAACACTGATA+CGG + chr3_3:40196328-40196347 Msa0451740:intron 35.0%
TAGACATGACATGTTGACAT+TGG + chr3_3:40196355-40196374 Msa0451740:intron 35.0%
CACTGACACATCAAATTGAA+AGG - chr3_3:40196459-40196478 None:intergenic 35.0%
TGAAGAGAATAATGTCGCAA+AGG + chr3_3:40196826-40196845 Msa0451740:CDS 35.0%
CTTTGAATGCTTCATTAGCA+AGG - chr3_3:40196868-40196887 None:intergenic 35.0%
! CTTGCTAATGAAGCATTCAA+AGG + chr3_3:40196866-40196885 Msa0451740:CDS 35.0%
CATGTTCAATAATGTGTAGG+TGG - chr3_3:40197105-40197124 None:intergenic 35.0%
CACCTACACATTATTGAACA+TGG + chr3_3:40197103-40197122 Msa0451740:intron 35.0%
CACCATGTTCAATAATGTGT+AGG - chr3_3:40197108-40197127 None:intergenic 35.0%
ACACAAGCAATTGAGCTAAA+TGG + chr3_3:40197266-40197285 Msa0451740:CDS 35.0%
TGCAATACTAGATGCTACAA+AGG + chr3_3:40197352-40197371 Msa0451740:CDS 35.0%
!!! AGGAGAGTGTCTAAAGTTTT+AGG - chr3_3:40197418-40197437 None:intergenic 35.0%
TGTTGTTATAGGGTTACTAC+AGG + chr3_3:40197491-40197510 Msa0451740:intron 35.0%
!! AGCATTGAAAGATTTTCAGC+AGG + chr3_3:40197552-40197571 Msa0451740:CDS 35.0%
GTCTTAACAAGGTTGGAATA+AGG + chr3_3:40197603-40197622 Msa0451740:intron 35.0%
GTCTGATATCAGTCCAAAAA+AGG + chr3_3:40197880-40197899 Msa0451740:intron 35.0%
! GAGCTCTAATACTAGTAGAT+TGG - chr3_3:40198107-40198126 None:intergenic 35.0%
GAAGCAATTATAGGTTGTGA+TGG + chr3_3:40198244-40198263 Msa0451740:intron 35.0%
ATTAGGGATGAGAATAGACT+AGG + chr3_3:40198289-40198308 Msa0451740:intron 35.0%
GCTTAGGCCTTCAAAAAAAT+TGG - chr3_3:40198350-40198369 None:intergenic 35.0%
CTAAAATGTAAGCCTATGAC+AGG - chr3_3:40198384-40198403 None:intergenic 35.0%
! CTGTCATAGGCTTACATTTT+AGG + chr3_3:40198382-40198401 Msa0451740:intron 35.0%
! TGCCATTCAAAAAGCCTTTT+AGG - chr3_3:40198740-40198759 None:intergenic 35.0%
ACAATAAAACCACCACTTGA+GGG - chr3_3:40198866-40198885 None:intergenic 35.0%
TACAATAAAACCACCACTTG+AGG - chr3_3:40198867-40198886 None:intergenic 35.0%
TATAGAAGACATTGCTCAAG+CGG + chr3_3:40198912-40198931 Msa0451740:intron 35.0%
AAAAACTGCCATTAGGTTAG+AGG + chr3_3:40198970-40198989 Msa0451740:intron 35.0%
TAGGAATTCCTCTAACCTAA+TGG - chr3_3:40198981-40199000 None:intergenic 35.0%
! AGTTAAAAAGTGGGTTCACA+TGG - chr3_3:40199033-40199052 None:intergenic 35.0%
! TTTTACTTGACCATTCGAAG+AGG + chr3_3:40199224-40199243 Msa0451740:intron 35.0%
TTTGTTGCATCAGGATCATT+TGG - chr3_3:40199761-40199780 None:intergenic 35.0%
TCCATAGATTTCCGTTCAAT+AGG + chr3_3:40199872-40199891 Msa0451740:CDS 35.0%
ACCTATTGAACGGAAATCTA+TGG - chr3_3:40199876-40199895 None:intergenic 35.0%
CTTCAAATAGCATGCCATAT+AGG + chr3_3:40200062-40200081 Msa0451740:intron 35.0%
TGCATAACTGTACTCCTATA+TGG - chr3_3:40200079-40200098 None:intergenic 35.0%
! CATATCTTTTGACCTTGAGT+TGG + chr3_3:40200097-40200116 Msa0451740:intron 35.0%
! TGATCACTGTTCATTTTCAC+GGG + chr3_3:40200300-40200319 Msa0451740:intron 35.0%
GATATGAAATGTGAGGTTGA+TGG + chr3_3:40200572-40200591 Msa0451740:intron 35.0%
CAACCAATTAAAAGGAAGGT+GGG - chr3_3:40200880-40200899 None:intergenic 35.0%
ACAACCAATTAAAAGGAAGG+TGG - chr3_3:40200881-40200900 None:intergenic 35.0%
! TCACCTATTTGTTGATGCAT+AGG + chr3_3:40201040-40201059 Msa0451740:intron 35.0%
! CACCTATTTGTTGATGCATA+GGG + chr3_3:40201041-40201060 Msa0451740:intron 35.0%
AACCCTATGCATCAACAAAT+AGG - chr3_3:40201046-40201065 None:intergenic 35.0%
TACTTATGGAAAGGTTTGTG+AGG - chr3_3:40201135-40201154 None:intergenic 35.0%
ACTCTCTAGTACTTATGGAA+AGG - chr3_3:40201144-40201163 None:intergenic 35.0%
TCTCTACTCTCTAGTACTTA+TGG - chr3_3:40201149-40201168 None:intergenic 35.0%
! AGAGACATTTTTATGCATGC+TGG + chr3_3:40201164-40201183 Msa0451740:intron 35.0%
CACAATTGTAGCTACTATTG+TGG - chr3_3:40201342-40201361 None:intergenic 35.0%
CACAATAGTAGCTACAATTG+TGG + chr3_3:40201340-40201359 Msa0451740:CDS 35.0%
ATAGTAGCTACAATTGTGGT+TGG + chr3_3:40201344-40201363 Msa0451740:CDS 35.0%
CCAACCATCCTATGATTAAT+TGG - chr3_3:40201472-40201491 None:intergenic 35.0%
CCAATTAATCATAGGATGGT+TGG + chr3_3:40201469-40201488 Msa0451740:intron 35.0%
! GAACTAATATCTAAGACACG+CGG - chr3_3:40201649-40201668 None:intergenic 35.0%
!! TAGGCCTTCTGAAACTAAAT+AGG + chr3_3:40201694-40201713 Msa0451740:intron 35.0%
AAACGCAACAGAATGTCTAA+AGG - chr3_3:40201726-40201745 None:intergenic 35.0%
TTGTTTACGGAATGCATAGA+TGG - chr3_3:40201863-40201882 None:intergenic 35.0%
!! TAGTTTTTAGATGCCAATCC+AGG - chr3_3:40201979-40201998 None:intergenic 35.0%
! GGATTGGCATCTAAAAACTA+TGG + chr3_3:40201979-40201998 Msa0451740:intron 35.0%
AAAAACTATGGCTGCCTATT+TGG + chr3_3:40201991-40202010 Msa0451740:intron 35.0%
TAGGTGTATTCGGATTTAAC+GGG + chr3_3:40202039-40202058 Msa0451740:intron 35.0%
GAGTGAAATCAAATGCTACA+AGG - chr3_3:40202201-40202220 None:intergenic 35.0%
! GTAGCATTTGATTTCACTCA+TGG + chr3_3:40202202-40202221 Msa0451740:intron 35.0%
TATTCAGGAGCAAGAATAGA+AGG + chr3_3:40202275-40202294 Msa0451740:CDS 35.0%
ATTCAGGAGCAAGAATAGAA+GGG + chr3_3:40202276-40202295 Msa0451740:CDS 35.0%
AGAAGGGGATACTATTACTT+TGG + chr3_3:40202292-40202311 Msa0451740:CDS 35.0%
!! AACAGAAGTGCTTGCATAAA+CGG + chr3_3:40202348-40202367 Msa0451740:CDS 35.0%
AAGTGTATTTGCATTTGTCC+TGG + chr3_3:40202427-40202446 Msa0451740:intron 35.0%
! TTGTCCTGGTTCATTGTTTT+AGG + chr3_3:40202441-40202460 Msa0451740:intron 35.0%
CATACCTAAAACAATGAACC+AGG - chr3_3:40202448-40202467 None:intergenic 35.0%
!! CTTTTGTTTGCAACACAATC+TGG - chr3_3:40202475-40202494 None:intergenic 35.0%
TGTTGCTAATATCTTCAAGG+TGG + chr3_3:40202617-40202636 Msa0451740:intron 35.0%
TTTCTTTGACCATTATGTGG+AGG + chr3_3:40202721-40202740 Msa0451740:intron 35.0%
TTCTTTGACCATTATGTGGA+GGG + chr3_3:40202722-40202741 Msa0451740:intron 35.0%
!!! GGAGCTATTTTTTGTTGATG+AGG + chr3_3:40202750-40202769 Msa0451740:intron 35.0%
AGAAAACAAGCACAGAAACA+TGG + chr3_3:40202918-40202937 Msa0451740:intron 35.0%
GAAAACAAGCACAGAAACAT+GGG + chr3_3:40202919-40202938 Msa0451740:intron 35.0%
TGGGAATGAAATCCTACTTA+TGG + chr3_3:40202938-40202957 Msa0451740:intron 35.0%
GAAATCCTACTTATGGAGAA+CGG + chr3_3:40202945-40202964 Msa0451740:intron 35.0%
AAATCCTACTTATGGAGAAC+GGG + chr3_3:40202946-40202965 Msa0451740:intron 35.0%
!! CGTCATTTTAACGTTTGACA+AGG + chr3_3:40202996-40203015 Msa0451740:intron 35.0%
! AGATATGGATTTTCTTCCGA+AGG - chr3_3:40203213-40203232 None:intergenic 35.0%
GGCTAATAAAGAAAGAGCTA+GGG - chr3_3:40203327-40203346 None:intergenic 35.0%
AGGCTAATAAAGAAAGAGCT+AGG - chr3_3:40203328-40203347 None:intergenic 35.0%
TTTCAATTCACTCAGTTAGC+TGG + chr3_3:40203519-40203538 Msa0451740:intron 35.0%
TTCAATTCACTCAGTTAGCT+GGG + chr3_3:40203520-40203539 Msa0451740:intron 35.0%
TCAGCTATATATCTAGCTAG+AGG + chr3_3:40203575-40203594 Msa0451740:intron 35.0%
! AGTATTCTGCTGTTTACCTT+TGG + chr3_3:40203691-40203710 Msa0451740:CDS 35.0%
! GATAAAGTTTTCGTAGTCCA+TGG + chr3_3:40203728-40203747 Msa0451740:CDS 35.0%
! TAAAGTTTTCGTAGTCCATG+GGG + chr3_3:40203730-40203749 Msa0451740:CDS 35.0%
TATATATGTTCGGTATGCGT+AGG + chr3_3:40203905-40203924 Msa0451740:intron 35.0%
ATATATGTTCGGTATGCGTA+GGG + chr3_3:40203906-40203925 Msa0451740:intron 35.0%
GTTACCTGATCACAGTAATT+TGG - chr3_3:40204211-40204230 None:intergenic 35.0%
AGGTTGTAACAAAAGGGATA+TGG - chr3_3:40204233-40204252 None:intergenic 35.0%
! AATATAAGAAGTGTGTGGCA+CGG - chr3_3:40204282-40204301 None:intergenic 35.0%
TTTCTGTAGATGGGTAACAA+AGG + chr3_3:40204363-40204382 Msa0451740:intron 35.0%
GTAATGTTGGGTTTCAAATC+AGG - chr3_3:40204411-40204430 None:intergenic 35.0%
GCTGCAAATGTAGTAATGTT+GGG - chr3_3:40204423-40204442 None:intergenic 35.0%
TGCTGCAAATGTAGTAATGT+TGG - chr3_3:40204424-40204443 None:intergenic 35.0%
GATATTTCACATCTGTCACA+TGG + chr3_3:40204578-40204597 Msa0451740:intron 35.0%
! ACAGTGTTATCGATTACAGA+TGG - chr3_3:40204700-40204719 None:intergenic 35.0%
! GTGCTGACATACTTTCTTAT+TGG + chr3_3:40204802-40204821 Msa0451740:intron 35.0%
AAGTTGTTTGCATAAGCCAT+TGG - chr3_3:40204871-40204890 None:intergenic 35.0%
TTGATTATGAGAACATTCGG+AGG - chr3_3:40204894-40204913 None:intergenic 35.0%
! TAGAAATCTAGAACTGCCAA+TGG + chr3_3:40204927-40204946 Msa0451740:three_prime_UTR 35.0%
!!! TGTCTAAGTTTTAAGCCCTA+AGG + chr3_3:40204967-40204986 Msa0451740:three_prime_UTR 35.0%
!!! GTCTAAGTTTTAAGCCCTAA+GGG + chr3_3:40204968-40204987 Msa0451740:three_prime_UTR 35.0%
CAAAACAAAATGTTGCCCTT+AGG - chr3_3:40204986-40205005 None:intergenic 35.0%
CAAAAGAAAGTGGCATCATT+TGG - chr3_3:40205056-40205075 None:intergenic 35.0%
TGGAATAGTGAGAGGATGTT+GGG - chr3_3:40195802-40195821 None:intergenic 40.0%
AGAGAGAGAGAGAGATTTAC+CGG - chr3_3:40195853-40195872 None:intergenic 40.0%
AGAACAAGAAGATCTAGGCA+TGG - chr3_3:40195910-40195929 None:intergenic 40.0%
CTCTTCAACTACCCTAACAA+TGG + chr3_3:40195946-40195965 Msa0451740:intron 40.0%
CCAAAAGCAACTGCATCAAA+AGG - chr3_3:40196139-40196158 None:intergenic 40.0%
!! CCTTTTGATGCAGTTGCTTT+TGG + chr3_3:40196136-40196155 Msa0451740:intron 40.0%
!!! TTTGATGCAGTTGCTTTTGG+TGG + chr3_3:40196139-40196158 Msa0451740:intron 40.0%
!!! TTGATGCAGTTGCTTTTGGT+GGG + chr3_3:40196140-40196159 Msa0451740:intron 40.0%
AGGAGAGAGAAAGATCATGT+GGG + chr3_3:40196298-40196317 Msa0451740:intron 40.0%
TCCGTATCAGTGTTTCATAC+AGG - chr3_3:40196332-40196351 None:intergenic 40.0%
TGTTAGTATCGTGTCAGTGT+CGG + chr3_3:40196422-40196441 Msa0451740:intron 40.0%
GTCTGTTGTCTTAACAAGGT+TGG + chr3_3:40197596-40197615 Msa0451740:intron 40.0%
CAAGGTTGGAATAAGGAACA+TGG + chr3_3:40197610-40197629 Msa0451740:intron 40.0%
TTCAAAAAAATTGGCAGGCC+AGG - chr3_3:40198341-40198360 None:intergenic 40.0%
!!! TGGCCTGCCAATTTTTTTGA+AGG + chr3_3:40198340-40198359 Msa0451740:intron 40.0%
AGGCCTTCAAAAAAATTGGC+AGG - chr3_3:40198346-40198365 None:intergenic 40.0%
!!! TTTTTTTGAAGGCCTAAGCC+TGG + chr3_3:40198351-40198370 Msa0451740:intron 40.0%
!! TATCAGGCTTTTAGAAGGAC+AGG - chr3_3:40198414-40198433 None:intergenic 40.0%
! GTCCTTCTAAAAGCCTGATA+CGG + chr3_3:40198414-40198433 Msa0451740:intron 40.0%
! CTTAAATAGGCCGGCTTAAT+AGG + chr3_3:40198714-40198733 Msa0451740:intron 40.0%
! GGCCTAAAAGGCTTTTTGAA+TGG + chr3_3:40198735-40198754 Msa0451740:intron 40.0%
! AAGGCTTTTTGAATGGCATG+TGG + chr3_3:40198742-40198761 Msa0451740:intron 40.0%
! CCTATTTAGCTTAAAAGGCC+AGG - chr3_3:40198768-40198787 None:intergenic 40.0%
!! CCTGGCCTTTTAAGCTAAAT+AGG + chr3_3:40198765-40198784 Msa0451740:intron 40.0%
! GTTTCTAAAAAAGCCAAGCC+TGG + chr3_3:40198787-40198806 Msa0451740:intron 40.0%
AGGTTAGAGGAATTCCTATC+TGG + chr3_3:40198983-40199002 Msa0451740:intron 40.0%
AAAAAGGCAAAGTTGCACCA+CGG + chr3_3:40199071-40199090 Msa0451740:intron 40.0%
GAATGAAGATAAAAGACCCG+TGG - chr3_3:40199091-40199110 None:intergenic 40.0%
!! CAAGTTGCATTTGATGGACT+AGG - chr3_3:40199310-40199329 None:intergenic 40.0%
! TTATACCCGAGTTGACAACA+AGG - chr3_3:40199359-40199378 None:intergenic 40.0%
! TTGGACACATTTTCTTGACC+TGG - chr3_3:40199742-40199761 None:intergenic 40.0%
!! GAAGAAGCTATTTCTGTACC+AGG + chr3_3:40199824-40199843 Msa0451740:CDS 40.0%
!! AGCTATTTCTGTACCAGGAT+CGG + chr3_3:40199829-40199848 Msa0451740:CDS 40.0%
!! AAATGTGAGGTTGATGGAGA+AGG + chr3_3:40200578-40200597 Msa0451740:intron 40.0%
! GTTGATGGAGAAGGAAAGAA+GGG + chr3_3:40200587-40200606 Msa0451740:intron 40.0%
! TCTCCCACCTTCCTTTTAAT+TGG + chr3_3:40200874-40200893 Msa0451740:intron 40.0%
! TGAGAGGACTTCTATTGACT+TGG - chr3_3:40201078-40201097 None:intergenic 40.0%
GGTATGTTATGGAACATGAG+AGG - chr3_3:40201094-40201113 None:intergenic 40.0%
CGGATGATTACGGTATGTTA+TGG - chr3_3:40201105-40201124 None:intergenic 40.0%
GCTGCAATACTGGTACATTT+AGG + chr3_3:40201399-40201418 Msa0451740:CDS 40.0%
AGGAGTCATTTACAAGACCT+AGG + chr3_3:40201419-40201438 Msa0451740:CDS 40.0%
AGTTTCAGAAGGCCTAAGAA+GGG - chr3_3:40201690-40201709 None:intergenic 40.0%
TAGTTTCAGAAGGCCTAAGA+AGG - chr3_3:40201691-40201710 None:intergenic 40.0%
AGGTGTATTCGGATTTAACG+GGG + chr3_3:40202040-40202059 Msa0451740:intron 40.0%
ATTCTTGCTCCTGAATACTG+TGG - chr3_3:40202272-40202291 None:intergenic 40.0%
TTCAGGAGCAAGAATAGAAG+GGG + chr3_3:40202277-40202296 Msa0451740:CDS 40.0%
ACAGTTATGTCGACAAGAGA+AGG - chr3_3:40202515-40202534 None:intergenic 40.0%
TTTGTGCCTCATTTGTACGA+AGG + chr3_3:40202794-40202813 Msa0451740:intron 40.0%
AAGACTGTATCCCATACAAG+AGG + chr3_3:40203033-40203052 Msa0451740:intron 40.0%
TCAGAAGATCATAGAACTGC+AGG - chr3_3:40203167-40203186 None:intergenic 40.0%
AATGGTGACTTTGTGGATAG+AGG + chr3_3:40203237-40203256 Msa0451740:CDS 40.0%
! GGATAGAGGATCGTTTTCTT+TGG + chr3_3:40203251-40203270 Msa0451740:CDS 40.0%
TTTAAGTGCATGTCTCCATC+AGG + chr3_3:40203297-40203316 Msa0451740:CDS 40.0%
!!! GATATATGGTTTTGAGGGTG+AGG + chr3_3:40203625-40203644 Msa0451740:CDS 40.0%
TCGTTTATCACATGAGCCAA+AGG - chr3_3:40203710-40203729 None:intergenic 40.0%
! AAAGTTTTCGTAGTCCATGG+GGG + chr3_3:40203731-40203750 Msa0451740:CDS 40.0%
TGTGCGATCTCATGAAGTAA+AGG + chr3_3:40204132-40204151 Msa0451740:CDS 40.0%
ATCTCATGAAGTAAAGGACG+AGG + chr3_3:40204138-40204157 Msa0451740:CDS 40.0%
TCTCATGAAGTAAAGGACGA+GGG + chr3_3:40204139-40204158 Msa0451740:CDS 40.0%
! GGTTATGAGGTTGATCATGA+CGG + chr3_3:40204160-40204179 Msa0451740:CDS 40.0%
TGCTCCAAATTACTGTGATC+AGG + chr3_3:40204204-40204223 Msa0451740:CDS 40.0%
AGGCGCTTCAAATCGAATAA+AGG - chr3_3:40204391-40204410 None:intergenic 40.0%
CATTACTACATTTGCAGCAG+TGG + chr3_3:40204425-40204444 Msa0451740:CDS 40.0%
ATGTTGTCAAATATCGGCCA+TGG + chr3_3:40204529-40204548 Msa0451740:intron 40.0%
AATTAGCCATGGTGTTTCCA+TGG - chr3_3:40204549-40204568 None:intergenic 40.0%
CATGGCCAATTTGTGAATGA+TGG + chr3_3:40204596-40204615 Msa0451740:intron 40.0%
TGCCACCATCATTCACAAAT+TGG - chr3_3:40204604-40204623 None:intergenic 40.0%
TAAGCTACCATAGAACACCA+TGG - chr3_3:40204627-40204646 None:intergenic 40.0%
!! AAGCCATTGGCTTAACATCA+GGG - chr3_3:40204858-40204877 None:intergenic 40.0%
!! TAAGCCATTGGCTTAACATC+AGG - chr3_3:40204859-40204878 None:intergenic 40.0%
! AATCTAGAACTGCCAATGGA+TGG + chr3_3:40204931-40204950 Msa0451740:three_prime_UTR 40.0%
AAAGTGGCATCATTTGGAGA+GGG - chr3_3:40205050-40205069 None:intergenic 40.0%
ACAGGTTACATGAATGGCAT+AGG + chr3_3:40205167-40205186 Msa0451740:intron 40.0%
GTTACATGAATGGCATAGGT+TGG + chr3_3:40205171-40205190 Msa0451740:intron 40.0%
! ACTTTGCTATGTCTTCCGCA+CGG - chr3_3:40195739-40195758 None:intergenic 45.0%
TGCGGAAGACATAGCAAAGT+GGG + chr3_3:40195739-40195758 Msa0451740:five_prime_UTR 45.0%
GTGGAATAGTGAGAGGATGT+TGG - chr3_3:40195803-40195822 None:intergenic 45.0%
CACATCAAACCCAACATCCT+TGG - chr3_3:40196205-40196224 None:intergenic 45.0%
CAGGAGAGAGAAAGATCATG+TGG + chr3_3:40196297-40196316 Msa0451740:intron 45.0%
AGAGAGAAAGATCATGTGGG+TGG + chr3_3:40196301-40196320 Msa0451740:intron 45.0%
GAGAGAAAGATCATGTGGGT+GGG + chr3_3:40196302-40196321 Msa0451740:intron 45.0%
TTGATGTGTCAGTGCTACGT+AGG + chr3_3:40196465-40196484 Msa0451740:intron 45.0%
GTAGCTGGTTGATTATTGCG+AGG + chr3_3:40196734-40196753 Msa0451740:intron 45.0%
TTCACAGGATGAGCAAATGC+TGG - chr3_3:40197201-40197220 None:intergenic 45.0%
ATCGTGCCTTTGCACATCTT+AGG + chr3_3:40197312-40197331 Msa0451740:CDS 45.0%
CATCTTAGGCTCGAGGAATA+TGG + chr3_3:40197326-40197345 Msa0451740:CDS 45.0%
TTATAGGGTTACTACAGGCG+CGG + chr3_3:40197496-40197515 Msa0451740:intron 45.0%
! TCTTGGGCTGGGAAAATTCA+AGG + chr3_3:40197528-40197547 Msa0451740:CDS 45.0%
!!! CGGTAGCTGTAACCCTTTTT+TGG - chr3_3:40197896-40197915 None:intergenic 45.0%
GTTACAGCTACCGTTAACGA+AGG + chr3_3:40197903-40197922 Msa0451740:intron 45.0%
! TTGGAAAGGAGGCGTATTGT+TGG + chr3_3:40198175-40198194 Msa0451740:intron 45.0%
CTTCTTCTCAAGTACTCTGC+TGG - chr3_3:40198228-40198247 None:intergenic 45.0%
AGAGGGCAAGGTCTCAAATT+AGG + chr3_3:40198272-40198291 Msa0451740:intron 45.0%
GAGGGCAAGGTCTCAAATTA+GGG + chr3_3:40198273-40198292 Msa0451740:intron 45.0%
! GCCTTTTAGGCCTATTAAGC+CGG - chr3_3:40198727-40198746 None:intergenic 45.0%
! TTTTTGAATGGCATGTGGCC+TGG + chr3_3:40198747-40198766 Msa0451740:intron 45.0%
AAAACCACCACTTGAGGGAT+GGG - chr3_3:40198861-40198880 None:intergenic 45.0%
TAAAACCACCACTTGAGGGA+TGG - chr3_3:40198862-40198881 None:intergenic 45.0%
GCGGTTTCGACTGAAATTTG+AGG + chr3_3:40198931-40198950 Msa0451740:intron 45.0%
! AATTCCTATCTGGAGCCCTT+AGG + chr3_3:40198993-40199012 Msa0451740:intron 45.0%
! ATTCCTATCTGGAGCCCTTA+GGG + chr3_3:40198994-40199013 Msa0451740:intron 45.0%
GCAGCTTCTGTTTACCCTAA+GGG - chr3_3:40199011-40199030 None:intergenic 45.0%
AAAAGGCAAAGTTGCACCAC+GGG + chr3_3:40199072-40199091 Msa0451740:intron 45.0%
! TGGTCTCCTTGTTGTCAACT+CGG + chr3_3:40199350-40199369 Msa0451740:intron 45.0%
TGTCAACTCGGGTATAACAG+TGG + chr3_3:40199362-40199381 Msa0451740:intron 45.0%
AGGAGGAGGGAGATTTAGAA+AGG - chr3_3:40199946-40199965 None:intergenic 45.0%
AACAAAAAGTTGCCCACAGG+AGG - chr3_3:40199963-40199982 None:intergenic 45.0%
CACAACAAAAAGTTGCCCAC+AGG - chr3_3:40199966-40199985 None:intergenic 45.0%
TTAAGTAGTAGCGACGACAG+TGG + chr3_3:40200434-40200453 Msa0451740:intron 45.0%
TACATACGCAGCCAAGAACT+TGG - chr3_3:40200514-40200533 None:intergenic 45.0%
!! GGTTGATGGAGAAGGAAAGA+AGG + chr3_3:40200586-40200605 Msa0451740:intron 45.0%
AGAAGGAAAGAAGGGCAAAG+TGG + chr3_3:40200595-40200614 Msa0451740:intron 45.0%
GATAGAAACACAAGGCCACA+AGG - chr3_3:40200856-40200875 None:intergenic 45.0%
AGGTGGGAGATAGAAACACA+AGG - chr3_3:40200864-40200883 None:intergenic 45.0%
AGCAGTGACAGTAGCAGTTA+TGG + chr3_3:40201283-40201302 Msa0451740:CDS 45.0%
!! AATTGTGGTTGGTCTGCTGT+TGG + chr3_3:40201355-40201374 Msa0451740:CDS 45.0%
TTTCATTTCGGCAGAACAGC+AGG - chr3_3:40201619-40201638 None:intergenic 45.0%
TGCTGTTCTGCCGAAATGAA+AGG + chr3_3:40201618-40201637 Msa0451740:intron 45.0%
! AATATCTAAGACACGCGGCA+TGG - chr3_3:40201644-40201663 None:intergenic 45.0%
GTCGACATAACTGTTCCTCA+TGG + chr3_3:40202521-40202540 Msa0451740:CDS 45.0%
! ACTGTTTGTGGTGATGTGCA+TGG + chr3_3:40202554-40202573 Msa0451740:CDS 45.0%
GATGTGCATGGTCAGGTAAT+TGG + chr3_3:40202566-40202585 Msa0451740:intron 45.0%
TTCACCCGTTCTCCATAAGT+AGG - chr3_3:40202953-40202972 None:intergenic 45.0%
AAGAGCTAGGGTTTACCTGA+TGG - chr3_3:40203315-40203334 None:intergenic 45.0%
!!! GGGGTCTTTTCAGTGTTGAT+GGG + chr3_3:40203750-40203769 Msa0451740:CDS 45.0%
!!! GGGTCTTTTCAGTGTTGATG+GGG + chr3_3:40203751-40203770 Msa0451740:CDS 45.0%
TGTGCATCTATACCTTCCTC+GGG - chr3_3:40203821-40203840 None:intergenic 45.0%
CTGTGCATCTATACCTTCCT+CGG - chr3_3:40203822-40203841 None:intergenic 45.0%
! GGTTGATGTGTGAGTTGCTA+TGG + chr3_3:40203927-40203946 Msa0451740:CDS 45.0%
TAACATCCCCACCGAAAGAA+AGG - chr3_3:40204003-40204022 None:intergenic 45.0%
TCGGTGGGGATGTTACAAAA+AGG + chr3_3:40204008-40204027 Msa0451740:CDS 45.0%
AGTAAAGGACGAGGGTTATG+AGG + chr3_3:40204147-40204166 Msa0451740:CDS 45.0%
AACACCATGGCTAATTGCAG+TGG + chr3_3:40204553-40204572 Msa0451740:intron 45.0%
GGCCAATTTGTGAATGATGG+TGG + chr3_3:40204599-40204618 Msa0451740:intron 45.0%
!! CAGATGGCATCGATTACAGA+TGG - chr3_3:40204684-40204703 None:intergenic 45.0%
! ATTGGCTTAACATCAGGGTG+TGG - chr3_3:40204853-40204872 None:intergenic 45.0%
ACACCCTGATGTTAAGCCAA+TGG + chr3_3:40204852-40204871 Msa0451740:CDS 45.0%
TTCAAAGCAGCACCATCCAT+TGG - chr3_3:40204946-40204965 None:intergenic 45.0%
GAAAGTGGCATCATTTGGAG+AGG - chr3_3:40205051-40205070 None:intergenic 45.0%
!! ATAATAATAATAATAATAAC+TGG - chr3_3:40202853-40202872 None:intergenic 5.0%
! TTTGCTATGTCTTCCGCACG+GGG - chr3_3:40195737-40195756 None:intergenic 50.0%
! CTTTGCTATGTCTTCCGCAC+GGG - chr3_3:40195738-40195757 None:intergenic 50.0%
GTGCGGAAGACATAGCAAAG+TGG + chr3_3:40195738-40195757 Msa0451740:five_prime_UTR 50.0%
! TATCGTGTCAGTGTCGGACA+CGG + chr3_3:40196428-40196447 Msa0451740:intron 50.0%
! GTGCAAAGGCACGATTAGCA+AGG - chr3_3:40197307-40197326 None:intergenic 50.0%
CTCGAGCCTAAGATGTGCAA+AGG - chr3_3:40197321-40197340 None:intergenic 50.0%
CTTTGCACATCTTAGGCTCG+AGG + chr3_3:40197319-40197338 Msa0451740:CDS 50.0%
CAATACCCGCGCTACAAGAT+CGG - chr3_3:40198129-40198148 None:intergenic 50.0%
AGAATAGACTAGGCCGAGCT+AGG + chr3_3:40198299-40198318 Msa0451740:intron 50.0%
AGGCTTTGCAAAGCCTAGCT+CGG - chr3_3:40198315-40198334 None:intergenic 50.0%
!! GCTTTTAGAAGGACAGGCTC+AGG - chr3_3:40198408-40198427 None:intergenic 50.0%
! GGCCGTATCAGGCTTTTAGA+AGG - chr3_3:40198419-40198438 None:intergenic 50.0%
! GCCGGCTTAATAGGCCTAAA+AGG + chr3_3:40198723-40198742 Msa0451740:intron 50.0%
TTGAGGGATGGGAATAGGTC+AGG - chr3_3:40198850-40198869 None:intergenic 50.0%
ACCTATTCCCATCCCTCAAG+TGG + chr3_3:40198851-40198870 Msa0451740:intron 50.0%
ACCACTTGAGGGATGGGAAT+AGG - chr3_3:40198855-40198874 None:intergenic 50.0%
TATTCCCATCCCTCAAGTGG+TGG + chr3_3:40198854-40198873 Msa0451740:intron 50.0%
TTACCCTAAGGGCTCCAGAT+AGG - chr3_3:40199000-40199019 None:intergenic 50.0%
GGCAGCTTCTGTTTACCCTA+AGG - chr3_3:40199012-40199031 None:intergenic 50.0%
! GGTCTCCTTGTTGTCAACTC+GGG + chr3_3:40199351-40199370 Msa0451740:intron 50.0%
TCTAAATCTCCCTCCTCCTG+TGG + chr3_3:40199947-40199966 Msa0451740:intron 50.0%
CTAAATCTCCCTCCTCCTGT+GGG + chr3_3:40199948-40199967 Msa0451740:intron 50.0%
AAAAGTTGCCCACAGGAGGA+GGG - chr3_3:40199959-40199978 None:intergenic 50.0%
AAAAAGTTGCCCACAGGAGG+AGG - chr3_3:40199960-40199979 None:intergenic 50.0%
AGGAAAGAAGGGCAAAGTGG+AGG + chr3_3:40200598-40200617 Msa0451740:intron 50.0%
CACAAGGCTGAAGTCTGCTA+AGG - chr3_3:40200840-40200859 None:intergenic 50.0%
CTTAGCAGACTTCAGCCTTG+TGG + chr3_3:40200838-40200857 Msa0451740:intron 50.0%
!! AGGAAAGCGCCGCAATTCTT+CGG + chr3_3:40201238-40201257 Msa0451740:intron 50.0%
CACTGCTGCTATGGCAACTT+CGG - chr3_3:40201270-40201289 None:intergenic 50.0%
TGCTACTGTCACTGCTGCTA+TGG - chr3_3:40201279-40201298 None:intergenic 50.0%
GACAGTAGCAGTTATGGCAG+TGG + chr3_3:40201289-40201308 Msa0451740:CDS 50.0%
AGTAGCAGTTATGGCAGTGG+TGG + chr3_3:40201292-40201311 Msa0451740:CDS 50.0%
TATGGCAGTGGTGGTCATGT+TGG + chr3_3:40201301-40201320 Msa0451740:CDS 50.0%
TTGGTCTGCTGTTGGTCCTT+GGG + chr3_3:40201363-40201382 Msa0451740:CDS 50.0%
TGGTGGAGTAGCTGCAATAC+TGG + chr3_3:40201389-40201408 Msa0451740:CDS 50.0%
GATGTCGAGCCACAGTATTC+AGG + chr3_3:40202260-40202279 Msa0451740:intron 50.0%
! TTGTGGTGATGTGCATGGTC+AGG + chr3_3:40202559-40202578 Msa0451740:CDS 50.0%
TGACCATTATGTGGAGGGAC+TGG + chr3_3:40202727-40202746 Msa0451740:intron 50.0%
GACCATTATGTGGAGGGACT+GGG + chr3_3:40202728-40202747 Msa0451740:intron 50.0%
ACCATTATGTGGAGGGACTG+GGG + chr3_3:40202729-40202748 Msa0451740:intron 50.0%
CTCGCAGCAACCTCTTGTAT+GGG - chr3_3:40203046-40203065 None:intergenic 50.0%
TCTCGCAGCAACCTCTTGTA+TGG - chr3_3:40203047-40203066 None:intergenic 50.0%
CAACACTGAAAAGACCCCCA+TGG - chr3_3:40203748-40203767 None:intergenic 50.0%
!! GGGGGTCTTTTCAGTGTTGA+TGG + chr3_3:40203749-40203768 Msa0451740:CDS 50.0%
CGTGGTGTAGGCCTTTCTTT+CGG + chr3_3:40203989-40204008 Msa0451740:CDS 50.0%
GTGTAGGCCTTTCTTTCGGT+GGG + chr3_3:40203993-40204012 Msa0451740:CDS 50.0%
TGTAGGCCTTTCTTTCGGTG+GGG + chr3_3:40203994-40204013 Msa0451740:CDS 50.0%
TATCGGCCATGGAAACACCA+TGG + chr3_3:40204540-40204559 Msa0451740:intron 50.0%
TCTGCCACTGCAATTAGCCA+TGG - chr3_3:40204560-40204579 None:intergenic 50.0%
!! TGTGAATGATGGTGGCACCA+TGG + chr3_3:40204607-40204626 Msa0451740:intron 50.0%
CGATTACAGATGGCAGACGA+GGG - chr3_3:40204674-40204693 None:intergenic 50.0%
TCGATTACAGATGGCAGACG+AGG - chr3_3:40204675-40204694 None:intergenic 50.0%
GAGAGAGAGATTTACCGGCG+TGG - chr3_3:40195848-40195867 None:intergenic 55.0%
! ATCGTGTCAGTGTCGGACAC+GGG + chr3_3:40196429-40196448 Msa0451740:intron 55.0%
AGAGCTCCGATCTTGTAGCG+CGG + chr3_3:40198120-40198139 Msa0451740:intron 55.0%
! TAGGTTGTGATGGCGCTGAG+AGG + chr3_3:40198254-40198273 Msa0451740:intron 55.0%
! AGGTTGTGATGGCGCTGAGA+GGG + chr3_3:40198255-40198274 Msa0451740:intron 55.0%
AAAATTGGCAGGCCAGGCTC+AGG - chr3_3:40198335-40198354 None:intergenic 55.0%
ATAGGCTAGCAGGCCGTATC+AGG - chr3_3:40198430-40198449 None:intergenic 55.0%
ATTGGACGCTTCACCGATCC+TGG - chr3_3:40199845-40199864 None:intergenic 55.0%
! CGGTTGGCACCGAAGAATTG+CGG - chr3_3:40201250-40201269 None:intergenic 55.0%
GCTGCTATGGCAACTTCGGT+TGG - chr3_3:40201266-40201285 None:intergenic 55.0%
CAGTGGTGGTCATGTTGGTC+AGG + chr3_3:40201306-40201325 Msa0451740:CDS 55.0%
! GTTGGTCTGCTGTTGGTCCT+TGG + chr3_3:40201362-40201381 Msa0451740:CDS 55.0%
TGGTCTGCTGTTGGTCCTTG+GGG + chr3_3:40201364-40201383 Msa0451740:CDS 55.0%
CGCGGCATGGCCTTTCATTT+CGG - chr3_3:40201631-40201650 None:intergenic 55.0%
TCCCCAGTCCCTCCACATAA+TGG - chr3_3:40202733-40202752 None:intergenic 55.0%
! TTTTGTGAGCCTCCCGAGGA+AGG + chr3_3:40203806-40203825 Msa0451740:CDS 55.0%
GCATCTATACCTTCCTCGGG+AGG - chr3_3:40203818-40203837 None:intergenic 55.0%
AGTGATCCACAACCTCTCCC+TGG + chr3_3:40203950-40203969 Msa0451740:CDS 55.0%
! GCTTGCTAGGTCCTCTTCCA+GGG - chr3_3:40203970-40203989 None:intergenic 55.0%
GGTGTAGGCCTTTCTTTCGG+TGG + chr3_3:40203992-40204011 Msa0451740:CDS 55.0%
GGTGGCACCATGGTGTTCTA+TGG + chr3_3:40204617-40204636 Msa0451740:intron 55.0%
GAGGCGGGTGGAATAGTGAG+AGG - chr3_3:40195810-40195829 None:intergenic 60.0%
GATTTACCGGCGTGGCGTGA+GGG - chr3_3:40195840-40195859 None:intergenic 60.0%
AGATTTACCGGCGTGGCGTG+AGG - chr3_3:40195841-40195860 None:intergenic 60.0%
!! GGTGCTGCTCATCTTGGGCT+GGG + chr3_3:40197517-40197536 Msa0451740:CDS 60.0%
GAGCTCCGATCTTGTAGCGC+GGG + chr3_3:40198121-40198140 Msa0451740:intron 60.0%
GGCTTTGCAAAGCCTGAGCC+TGG + chr3_3:40198320-40198339 Msa0451740:intron 60.0%
GTAAGCCTATGACAGGCCGC+AGG - chr3_3:40198377-40198396 None:intergenic 60.0%
CCTACAGCCTAGCCTACGAC+AGG - chr3_3:40198813-40198832 None:intergenic 60.0%
CCTGTCGTAGGCTAGGCTGT+AGG + chr3_3:40198810-40198829 Msa0451740:intron 60.0%
ATAGGTCAGGCCGGCCTACA+GGG - chr3_3:40198837-40198856 None:intergenic 60.0%
AATAGGTCAGGCCGGCCTAC+AGG - chr3_3:40198838-40198857 None:intergenic 60.0%
GGGATGGGAATAGGTCAGGC+CGG - chr3_3:40198846-40198865 None:intergenic 60.0%
GCGACGACAGTGGTCTGAGT+AGG + chr3_3:40200444-40200463 Msa0451740:intron 60.0%
TGCTGTTGGTCCTTGGGGCA+TGG + chr3_3:40201369-40201388 Msa0451740:CDS 60.0%
TGTTGGTCCTTGGGGCATGG+TGG + chr3_3:40201372-40201391 Msa0451740:CDS 60.0%
AGCTACTCCACCATGCCCCA+AGG - chr3_3:40201382-40201401 None:intergenic 60.0%
!! TGAGCTCAACGGGCTGCCTT+CGG + chr3_3:40203194-40203213 Msa0451740:CDS 60.0%
!! TCGGTTTTGTGAGCCTCCCG+AGG + chr3_3:40203802-40203821 Msa0451740:CDS 60.0%
CCTCTTCCAGGGAGAGGTTG+TGG - chr3_3:40203959-40203978 None:intergenic 60.0%
CCACAACCTCTCCCTGGAAG+AGG + chr3_3:40203956-40203975 Msa0451740:CDS 60.0%
CTAGGTCCTCTTCCAGGGAG+AGG - chr3_3:40203965-40203984 None:intergenic 60.0%
! CGCTTGCTAGGTCCTCTTCC+AGG - chr3_3:40203971-40203990 None:intergenic 60.0%
GGAAGAGGACCTAGCAAGCG+TGG + chr3_3:40203971-40203990 Msa0451740:CDS 60.0%
GGACCTAGCAAGCGTGGTGT+AGG + chr3_3:40203977-40203996 Msa0451740:CDS 60.0%
AGGCCTACACCACGCTTGCT+AGG - chr3_3:40203983-40204002 None:intergenic 60.0%
GTGTGACGCTTAGCCCCGTG+CGG + chr3_3:40195721-40195740 Msa0451740:five_prime_UTR 65.0%
!! AGGCGCGGTGCTGCTCATCT+TGG + chr3_3:40197511-40197530 Msa0451740:CDS 65.0%
!! GGCGCGGTGCTGCTCATCTT+GGG + chr3_3:40197512-40197531 Msa0451740:CDS 65.0%
!! CGGTGCTGCTCATCTTGGGC+TGG + chr3_3:40197516-40197535 Msa0451740:CDS 65.0%
! GTGATGGCGCTGAGAGGGCA+AGG + chr3_3:40198260-40198279 Msa0451740:intron 65.0%
GAAGGCCTAAGCCTGGCCTG+CGG + chr3_3:40198358-40198377 Msa0451740:intron 65.0%
AGCCAAGCCTGGCCTGTCGT+AGG + chr3_3:40198798-40198817 Msa0451740:intron 65.0%
AGCCTACGACAGGCCAGGCT+TGG - chr3_3:40198803-40198822 None:intergenic 65.0%
AGCCTGGCCTGTCGTAGGCT+AGG + chr3_3:40198803-40198822 Msa0451740:intron 65.0%
AGCCTAGCCTACGACAGGCC+AGG - chr3_3:40198808-40198827 None:intergenic 65.0%
GCTAGGCTGTAGGCCCCTGT+AGG + chr3_3:40198820-40198839 Msa0451740:intron 65.0%
TAGGTCAGGCCGGCCTACAG+GGG - chr3_3:40198836-40198855 None:intergenic 65.0%
ACAGGCCGCAGGCCAGGCTT+AGG - chr3_3:40198366-40198385 None:intergenic 70.0%
CCTATGACAGGCCGCAGGCC+AGG - chr3_3:40198372-40198391 None:intergenic 70.0%
CCTGGCCTGCGGCCTGTCAT+AGG + chr3_3:40198369-40198388 Msa0451740:intron 70.0%
GGCTGTAGGCCCCTGTAGGC+CGG + chr3_3:40198824-40198843 Msa0451740:intron 70.0%
!! CGTGAGGGAGCGCTGGAGGC+GGG - chr3_3:40195825-40195844 None:intergenic 75.0%
!! GCGTGAGGGAGCGCTGGAGG+CGG - chr3_3:40195826-40195845 None:intergenic 75.0%
!! GTGGCGTGAGGGAGCGCTGG+AGG - chr3_3:40195829-40195848 None:intergenic 75.0%
AGCGCTCCCTCACGCCACGC+CGG + chr3_3:40195831-40195850 Msa0451740:five_prime_UTR 75.0%
!!! GAGGGAGCGCTGGAGGCGGG+TGG - chr3_3:40195822-40195841 None:intergenic 80.0%
!! GGCGTGGCGTGAGGGAGCGC+TGG - chr3_3:40195832-40195851 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 40195708 40205315 40195708 ID=Msa0451740;Name=Msa0451740
chr3_3 mRNA 40195708 40205315 40195708 ID=Msa0451740-mRNA-1;Parent=Msa0451740;Name=Msa0451740-mRNA-1;_AED=0.16;_eAED=0.16;_QI=225|1|1|1|0.85|0.73|15|183|549
chr3_3 exon 40195708 40195852 40195708 ID=Msa0451740-mRNA-1:exon:7273;Parent=Msa0451740-mRNA-1
chr3_3 exon 40196738 40196887 40196738 ID=Msa0451740-mRNA-1:exon:7274;Parent=Msa0451740-mRNA-1
chr3_3 exon 40197234 40197403 40197234 ID=Msa0451740-mRNA-1:exon:7275;Parent=Msa0451740-mRNA-1
chr3_3 exon 40197502 40197573 40197502 ID=Msa0451740-mRNA-1:exon:7276;Parent=Msa0451740-mRNA-1
chr3_3 exon 40199743 40199893 40199743 ID=Msa0451740-mRNA-1:exon:7277;Parent=Msa0451740-mRNA-1
chr3_3 exon 40201240 40201440 40201240 ID=Msa0451740-mRNA-1:exon:7278;Parent=Msa0451740-mRNA-1
chr3_3 exon 40202261 40202369 40202261 ID=Msa0451740-mRNA-1:exon:7279;Parent=Msa0451740-mRNA-1
chr3_3 exon 40202463 40202580 40202463 ID=Msa0451740-mRNA-1:exon:7280;Parent=Msa0451740-mRNA-1
chr3_3 exon 40203171 40203318 40203171 ID=Msa0451740-mRNA-1:exon:7281;Parent=Msa0451740-mRNA-1
chr3_3 exon 40203579 40203827 40203579 ID=Msa0451740-mRNA-1:exon:7282;Parent=Msa0451740-mRNA-1
chr3_3 exon 40203927 40204052 40203927 ID=Msa0451740-mRNA-1:exon:7283;Parent=Msa0451740-mRNA-1
chr3_3 exon 40204125 40204225 40204125 ID=Msa0451740-mRNA-1:exon:7284;Parent=Msa0451740-mRNA-1
chr3_3 exon 40204372 40204446 40204372 ID=Msa0451740-mRNA-1:exon:7285;Parent=Msa0451740-mRNA-1
chr3_3 exon 40204850 40204995 40204850 ID=Msa0451740-mRNA-1:exon:7286;Parent=Msa0451740-mRNA-1
chr3_3 exon 40205219 40205315 40205219 ID=Msa0451740-mRNA-1:exon:7287;Parent=Msa0451740-mRNA-1
chr3_3 five_prime_UTR 40195708 40195852 40195708 ID=Msa0451740-mRNA-1:five_prime_utr;Parent=Msa0451740-mRNA-1
chr3_3 five_prime_UTR 40196738 40196817 40196738 ID=Msa0451740-mRNA-1:five_prime_utr;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40196818 40196887 40196818 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40197234 40197403 40197234 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40197502 40197573 40197502 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40199743 40199893 40199743 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40201240 40201440 40201240 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40202261 40202369 40202261 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40202463 40202580 40202463 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40203171 40203318 40203171 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40203579 40203827 40203579 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40203927 40204052 40203927 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40204125 40204225 40204125 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40204372 40204446 40204372 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 CDS 40204850 40204909 40204850 ID=Msa0451740-mRNA-1:cds;Parent=Msa0451740-mRNA-1
chr3_3 three_prime_UTR 40204910 40204995 40204910 ID=Msa0451740-mRNA-1:three_prime_utr;Parent=Msa0451740-mRNA-1
chr3_3 three_prime_UTR 40205219 40205315 40205219 ID=Msa0451740-mRNA-1:three_prime_utr;Parent=Msa0451740-mRNA-1
Gene Sequence

>Msa0451740

ATGGCAACTGAAGAGAATAATGTCGCAAAGGCTGAAGAATTTAAAGTCCTTGCTAATGAAGCATTCAAAGAACGGAAATTTGCCCATGCAATTGATCTATATACACAAGCAATTGAGCTAAATGGTCAAAATGCAGTTTACCTTGCTAATCGTGCCTTTGCACATCTTAGGCTCGAGGAATATGGTAGTGCAATACTAGATGCTACAAAGGCTATCGAAGTTGATCCTAAATATTCAAAGGGTTACTACAGGCGCGGTGCTGCTCATCTTGGGCTGGGAAAATTCAAGGAAGCATTGAAAGATTTTCAGCAGGTCAAGAAAATGTGTCCAAATGATCCTGATGCAACAAAGAAATTGAAGGAATGTGAAAAAGCTGTTATGAAACTGAAATTTGAAGAAGCTATTTCTGTACCAGGATCGGTGAAGCGTCCAATAGCTGAATCCATAGATTTCCGTTCAATAGGAAAGCGCCGCAATTCTTCGGTGCCAACCGAAGTTGCCATAGCAGCAGTGACAGTAGCAGTTATGGCAGTGGTGGTCATGTTGGTCAGGACATCAAAAACCACAATAGTAGCTACAATTGTGGTTGGTCTGCTGTTGGTCCTTGGGGCATGGTGGAGTAGCTGCAATACTGGTACATTTAGGAGTCATTTACAAGACCTAGATGTCGAGCCACAGTATTCAGGAGCAAGAATAGAAGGGGATACTATTACTTTGGATTTCGTAAAGAAAATGATGGATGATTTCAAGAAACAGAAGTGCTTGCATAAACGGTATGCATTCCAGATTGTGTTGCAAACAAAAGAGATGTTGCAAGCTTTGCCTTCTCTTGTCGACATAACTGTTCCTCATGGAAAACATTTTACTGTTTGTGGTGATGTGCATGGTCAGTTCTATGATCTTCTGAATATTTTTGAGCTCAACGGGCTGCCTTCGGAAGAAAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGATCGTTTTCTTTGGAAGTCATCCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCTATATATCTAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATATGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGAAACATTTGTTGAACTATTTGCGGAAGTATTCTGCTGTTTACCTTTGGCTCATGTGATAAACGATAAAGTTTTCGTAGTCCATGGGGGTCTTTTCAGTGTTGATGGGGTCAAACTCTCTGAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCCGAGGAAGGGTTGATGTGTGAGTTGCTATGGAGTGATCCACAACCTCTCCCTGGAAGAGGACCTAGCAAGCGTGGTGTAGGCCTTTCTTTCGGTGGGGATGTTACAAAAAGGTTCTTGAAGGATAATAATTTAGATTTAGTTGTGCGATCTCATGAAGTAAAGGACGAGGGTTATGAGGTTGATCATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGATGGGTAACAAAGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCCAACATTACTACATTTGCAGCAGTGCCACACCCTGATGTTAAGCCAATGGCTTATGCAAACAACTTCCTCCGAATGTTCTCATAA
Protein sequence

>Msa0451740

MATEENNVAKAEEFKVLANEAFKERKFAHAIDLYTQAIELNGQNAVYLANRAFAHLRLEEYGSAILDATKAIEVDPKYSKGYYRRGAAHLGLGKFKEALKDFQQVKKMCPNDPDATKKLKECEKAVMKLKFEEAISVPGSVKRPIAESIDFRSIGKRRNSSVPTEVAIAAVTVAVMAVVVMLVRTSKTTIVATIVVGLLLVLGAWWSSCNTGTFRSHLQDLDVEPQYSGARIEGDTITLDFVKKMMDDFKKQKCLHKRYAFQIVLQTKEMLQALPSLVDITVPHGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLNETFVELFAEVFCCLPLAHVINDKVFVVHGGLFSVDGVKLSEIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLKDNNLDLVVRSHEVKDEGYEVDHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNITTFAAVPHPDVKPMAYANNFLRMFS*