AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0187210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0187210 MtrunA17_Chr1g0192151 100.000 423 0 0 1 423 1 423 0.0 863
Msa0187210 MtrunA17_Chr4g0014731 98.815 422 5 0 2 423 3 424 0.0 852
Msa0187210 MtrunA17_Chr1g0182711 44.670 394 186 3 34 416 65 437 3.52e-113 339
Msa0187210 MtrunA17_Chr7g0262801 45.669 381 185 2 37 416 77 436 4.12e-112 336
Msa0187210 MtrunA17_Chr4g0050561 52.740 292 137 1 124 414 113 404 3.61e-106 320
Msa0187210 MtrunA17_Chr8g0345461 52.542 295 137 1 120 411 115 409 1.69e-105 318
Msa0187210 MtrunA17_Chr1g0200081 52.203 295 137 2 120 411 125 418 1.95e-102 311
Msa0187210 MtrunA17_Chr3g0145011 46.201 329 171 2 97 423 73 397 1.88e-98 300
Msa0187210 MtrunA17_Chr3g0141901 45.872 327 172 2 97 422 70 392 2.34e-97 296
Msa0187210 MtrunA17_Chr3g0108321 43.421 304 151 2 48 351 61 343 2.33e-88 273
Msa0187210 MtrunA17_Chr3g0143721 41.538 260 150 2 154 413 237 494 7.61e-61 209
Msa0187210 MtrunA17_Chr4g0052411 41.036 251 147 1 169 419 231 480 2.77e-60 207
Msa0187210 MtrunA17_Chr2g0297281 40.152 264 147 2 169 422 288 550 1.94e-59 206
Msa0187210 MtrunA17_Chr7g0217421 39.051 274 158 3 150 418 20 289 3.14e-59 198
Msa0187210 MtrunA17_Chr1g0180791 41.702 235 137 0 161 395 472 706 9.39e-59 205
Msa0187210 MtrunA17_Chr1g0180791 41.702 235 134 2 169 403 207 438 1.62e-57 202
Msa0187210 MtrunA17_Chr7g0264521 41.702 235 137 0 161 395 473 707 1.28e-58 205
Msa0187210 MtrunA17_Chr7g0264521 41.277 235 135 2 169 403 208 439 5.94e-57 200
Msa0187210 MtrunA17_Chr2g0327121 41.702 235 137 0 161 395 474 708 2.64e-58 204
Msa0187210 MtrunA17_Chr2g0327121 36.304 303 177 5 101 403 154 440 5.98e-56 197
Msa0187210 MtrunA17_Chr7g0255721 41.667 252 144 2 163 412 681 931 5.90e-55 196
Msa0187210 MtrunA17_Chr7g0255721 35.065 231 144 3 167 396 386 611 9.70e-35 137
Msa0187210 MtrunA17_Chr2g0331161 43.220 236 133 1 169 404 417 651 9.69e-55 194
Msa0187210 MtrunA17_Chr5g0429571 39.552 268 153 4 149 408 290 556 1.28e-53 191
Msa0187210 MtrunA17_Chr6g0456351 42.857 245 134 3 166 408 316 556 1.86e-53 187
Msa0187210 MtrunA17_Chr4g0031821 41.152 243 139 3 169 408 322 563 3.37e-53 190
Msa0187210 MtrunA17_Chr7g0255691 41.803 244 140 1 163 404 282 525 7.39e-53 185
Msa0187210 MtrunA17_Chr7g0255691 33.600 250 158 4 172 417 22 267 1.48e-33 132
Msa0187210 MtrunA17_Chr3g0094871 38.776 245 147 2 169 411 13 256 1.25e-52 182
Msa0187210 MtrunA17_Chr8g0362771 43.460 237 131 2 169 405 239 472 4.12e-52 186
Msa0187210 MtrunA17_Chr7g0255651 39.394 231 140 0 163 393 278 508 6.22e-52 183
Msa0187210 MtrunA17_Chr7g0255651 29.032 248 164 5 174 417 24 263 5.35e-22 98.6
Msa0187210 MtrunA17_Chr7g0248361 40.741 243 140 4 169 408 194 435 8.97e-52 184
Msa0187210 MtrunA17_Chr3g0129971 40.613 261 148 4 154 408 283 542 2.15e-51 185
Msa0187210 MtrunA17_Chr8g0388371 38.281 256 149 3 161 408 398 652 3.45e-51 185
Msa0187210 MtrunA17_Chr7g0260601 38.889 252 146 4 162 408 235 483 4.02e-51 182
Msa0187210 MtrunA17_Chr7g0255901 38.247 251 150 5 158 405 630 878 5.70e-50 181
Msa0187210 MtrunA17_Chr3g0135721 42.797 236 131 2 169 404 226 457 1.45e-49 178
Msa0187210 MtrunA17_Chr3g0104211 41.152 243 137 4 166 404 303 543 1.94e-49 179
Msa0187210 MtrunA17_Chr1g0158881 43.578 218 118 2 163 380 325 537 2.93e-49 178
Msa0187210 MtrunA17_Chr6g0476861 38.525 244 144 4 169 408 199 440 3.33e-48 174
Msa0187210 MtrunA17_Chr7g0255641 37.597 258 158 2 163 418 654 910 3.87e-48 176
Msa0187210 MtrunA17_Chr7g0255641 36.486 222 115 7 206 411 432 643 2.00e-31 127
Msa0187210 MtrunA17_Chr3g0135761 42.553 235 131 2 170 404 225 455 4.33e-48 174
Msa0187210 MtrunA17_Chr7g0246111 36.704 267 151 6 130 393 184 435 5.55e-47 168
Msa0187210 MtrunA17_Chr4g0033451 38.583 254 145 5 156 403 371 619 1.62e-45 169
Msa0187210 MtrunA17_Chr4g0004121 39.344 244 131 6 161 394 236 472 3.68e-43 158
Msa0187210 MtrunA17_Chr2g0316851 37.872 235 137 4 167 395 594 825 3.98e-43 162
Msa0187210 MtrunA17_Chr4g0026631 39.130 230 128 8 161 386 121 342 5.18e-43 156
Msa0187210 MtrunA17_Chr5g0432631 38.039 255 151 3 169 420 231 481 1.75e-42 159
Msa0187210 MtrunA17_Chr4g0052271 37.037 243 140 7 165 402 117 351 1.37e-41 151
Msa0187210 MtrunA17_Chr2g0277831 38.494 239 137 4 169 402 245 478 3.78e-41 155
Msa0187210 MtrunA17_Chr2g0277831 34.348 230 146 2 165 392 531 757 3.39e-40 152
Msa0187210 MtrunA17_Chr2g0327231 42.331 163 94 0 165 327 344 506 5.41e-41 152
Msa0187210 MtrunA17_Chr2g0327231 32.051 156 89 3 101 256 100 238 6.54e-20 92.0
Msa0187210 MtrunA17_Chr2g0321241 37.555 229 133 7 161 386 126 347 8.16e-41 150
Msa0187210 MtrunA17_Chr5g0432641 36.466 266 156 5 144 404 167 424 1.03e-40 153
Msa0187210 MtrunA17_Chr4g0038101 39.286 224 127 5 169 388 723 941 1.17e-40 154
Msa0187210 MtrunA17_Chr1g0195731 37.991 229 133 5 169 393 936 1159 3.02e-40 153
Msa0187210 MtrunA17_Chr1g0202371 38.117 223 129 5 169 388 399 615 6.85e-40 151
Msa0187210 MtrunA17_Chr3g0127401 37.295 244 135 8 168 405 82 313 3.43e-39 144
Msa0187210 MtrunA17_Chr3g0127431 38.362 232 129 7 168 393 85 308 3.74e-39 145
Msa0187210 MtrunA17_Chr5g0397121 36.123 227 139 3 169 393 515 737 4.55e-39 149
Msa0187210 MtrunA17_Chr4g0043381 37.168 226 137 2 169 393 839 1060 6.23e-39 149
Msa0187210 MtrunA17_Chr8g0387641 35.683 227 140 3 169 393 523 745 7.23e-39 149
Msa0187210 MtrunA17_Chr1g0195741 37.288 236 136 6 165 393 933 1163 2.39e-38 147
Msa0187210 MtrunA17_Chr3g0116131 37.668 223 130 5 169 387 904 1121 2.65e-37 144
Msa0187210 MtrunA17_Chr3g0135781 45.625 160 83 2 169 328 57 212 2.92e-37 135
Msa0187210 MtrunA17_Chr1g0204031 37.719 228 134 5 169 393 559 781 3.32e-37 144
Msa0187210 MtrunA17_Chr4g0047411 41.905 210 108 4 198 394 207 415 3.44e-37 143
Msa0187210 MtrunA17_Chr1g0202381 37.555 229 133 6 169 393 470 692 2.19e-36 141
Msa0187210 MtrunA17_Chr6g0462581 34.802 227 141 4 169 393 502 723 7.16e-36 140
Msa0187210 MtrunA17_Chr3g0086401 32.258 248 145 3 165 392 383 627 1.16e-34 136
Msa0187210 MtrunA17_Chr3g0086401 33.600 250 146 7 169 406 94 335 1.19e-28 118
Msa0187210 MtrunA17_Chr6g0459561 33.193 238 147 7 161 393 376 606 4.94e-33 131
Msa0187210 MtrunA17_Chr8g0357301 32.911 237 145 4 179 406 481 712 9.38e-33 131
Msa0187210 MtrunA17_Chr1g0168321 41.143 175 100 3 237 408 196 370 5.29e-32 127
Msa0187210 MtrunA17_Chr3g0086411 30.488 246 150 3 165 392 213 455 2.09e-31 125
Msa0187210 MtrunA17_Chr3g0086411 39.869 153 86 2 256 402 8 160 2.18e-20 93.2
Msa0187210 MtrunA17_Chr6g0459551 36.500 200 115 6 152 349 87 276 2.67e-30 121
Msa0187210 MtrunA17_Chr6g0459541 30.142 282 158 8 163 410 38 314 1.02e-28 115
Msa0187210 MtrunA17_Chr2g0289231 33.624 229 133 7 169 387 299 518 1.23e-26 112
Msa0187210 MtrunA17_Chr1g0190401 32.338 201 128 3 151 350 667 860 1.42e-24 107
Msa0187210 MtrunA17_Chr4g0062081 50.633 79 38 1 170 247 10 88 6.20e-24 95.5
Msa0187210 MtrunA17_Chr5g0432391 34.574 188 111 3 242 420 78 262 7.80e-24 102
Msa0187210 MtrunA17_Chr6g0459531 29.119 261 140 10 161 410 61 287 5.13e-19 87.4
Msa0187210 MtrunA17_Chr5g0404291 38.158 152 72 6 203 346 387 524 8.00e-15 76.6
Msa0187210 MtrunA17_Chr6g0450161 35.032 157 94 5 198 353 357 506 1.37e-14 75.9
Msa0187210 MtrunA17_Chr6g0452361 31.313 198 106 7 180 363 7 188 1.45e-14 73.6
Msa0187210 MtrunA17_Chr4g0039781 35.484 155 86 5 203 353 368 512 2.78e-14 74.7
Msa0187210 MtrunA17_Chr6g0466811 34.066 182 98 6 177 345 219 391 5.39e-14 73.6
Msa0187210 MtrunA17_Chr5g0404651 31.792 173 97 7 182 345 229 389 2.99e-13 71.2
Msa0187210 MtrunA17_Chr2g0315911 31.818 154 90 5 193 340 230 374 5.86e-13 70.5
Msa0187210 MtrunA17_Chr6g0452391 31.088 193 100 6 177 345 216 399 2.43e-12 68.6
Msa0187210 MtrunA17_Chr6g0452371 30.612 196 91 7 180 345 221 401 5.76e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0187210 AT3G05530.1 95.283 424 19 1 1 423 1 424 0.0 830
Msa0187210 AT1G09100.1 95.272 423 20 0 1 423 1 423 0.0 822
Msa0187210 AT4G29040.1 46.457 381 182 2 37 416 75 434 3.50e-114 342
Msa0187210 AT2G20140.1 46.457 381 182 2 37 416 75 434 1.30e-113 340
Msa0187210 AT5G19990.2 53.082 292 136 1 124 414 57 348 3.67e-107 321
Msa0187210 AT5G20000.1 53.425 292 135 1 124 414 115 406 7.39e-107 322
Msa0187210 AT5G19990.1 53.082 292 136 1 124 414 115 406 1.68e-106 321
Msa0187210 AT5G19990.3 53.082 292 136 1 124 414 115 406 1.68e-106 321
Msa0187210 AT1G53750.1 52.542 295 137 1 120 411 115 409 3.06e-105 318
Msa0187210 AT5G58290.1 40.533 375 202 2 48 422 54 407 1.81e-102 310
Msa0187210 AT1G53780.3 45.479 376 174 5 59 423 240 595 2.05e-99 309
Msa0187210 AT1G53780.1 45.479 376 174 5 59 423 241 596 2.32e-99 308
Msa0187210 AT1G53780.4 45.479 376 174 5 59 423 241 596 2.32e-99 308
Msa0187210 AT1G53780.2 45.479 376 174 5 59 423 262 617 2.57e-99 309
Msa0187210 AT1G45000.1 45.872 327 172 2 97 422 70 392 3.03e-98 299
Msa0187210 AT5G43010.1 45.872 327 172 2 97 422 70 392 3.20e-98 299
Msa0187210 AT1G50250.1 41.154 260 151 2 154 413 247 504 1.22e-60 209
Msa0187210 AT5G42270.1 40.769 260 152 2 154 413 235 492 1.97e-60 209
Msa0187210 AT1G06430.1 40.152 264 147 2 169 422 219 481 2.16e-60 208
Msa0187210 AT1G06430.3 40.152 264 147 2 169 422 219 481 2.16e-60 208
Msa0187210 AT1G06430.2 40.152 264 147 2 169 422 219 481 2.16e-60 208
Msa0187210 AT2G30950.4 37.324 284 167 2 149 422 210 492 1.48e-59 206
Msa0187210 AT2G30950.1 37.324 284 167 2 149 422 206 488 1.53e-59 206
Msa0187210 AT2G30950.2 37.324 284 167 2 149 422 206 488 1.53e-59 206
Msa0187210 AT2G30950.3 37.324 284 167 2 149 422 206 488 1.53e-59 206
Msa0187210 AT3G53230.1 41.702 235 137 0 161 395 472 706 2.07e-58 204
Msa0187210 AT3G53230.1 36.304 303 172 6 129 413 151 450 1.53e-56 199
Msa0187210 AT3G09840.1 37.457 291 163 5 129 403 150 437 8.04e-58 203
Msa0187210 AT3G09840.1 41.525 236 137 1 161 395 471 706 1.59e-55 196
Msa0187210 AT1G45000.2 46.635 208 107 1 97 304 70 273 8.34e-58 193
Msa0187210 AT5G03340.1 37.113 291 164 5 129 403 150 437 3.72e-57 201
Msa0187210 AT5G03340.1 41.277 235 138 0 161 395 471 705 4.50e-57 201
Msa0187210 AT5G15250.1 39.773 264 148 2 169 422 223 485 3.78e-56 197
Msa0187210 AT3G02450.1 43.145 248 135 3 163 408 327 570 6.80e-54 189
Msa0187210 AT2G03670.1 41.224 245 141 2 163 404 279 523 3.35e-53 187
Msa0187210 AT2G03670.1 37.083 240 144 3 171 404 23 261 6.98e-45 164
Msa0187210 AT5G64580.1 39.423 312 174 6 111 408 249 559 5.43e-53 190
Msa0187210 AT5G15250.2 36.934 287 147 4 169 422 223 508 1.08e-52 184
Msa0187210 AT3G56690.1 38.889 252 151 2 163 412 717 967 2.97e-52 189
Msa0187210 AT3G56690.1 38.889 252 145 5 148 394 359 606 1.81e-45 169
Msa0187210 AT3G16290.1 41.525 236 137 1 169 404 409 643 6.12e-52 187
Msa0187210 AT3G47060.1 40.650 246 142 3 166 408 321 565 3.09e-51 184
Msa0187210 AT1G07510.1 40.244 246 143 3 169 411 326 570 4.52e-51 184
Msa0187210 AT5G58870.1 42.213 244 133 5 166 404 325 565 5.79e-51 184
Msa0187210 AT5G53170.1 41.736 242 136 2 163 404 355 591 6.78e-51 184
Msa0187210 AT2G26140.1 40.711 253 144 3 169 419 226 474 6.44e-49 177
Msa0187210 AT4G23940.1 36.719 256 153 3 161 408 421 675 6.89e-49 179
Msa0187210 AT2G29080.1 39.184 245 146 2 169 411 321 564 3.44e-48 176
Msa0187210 AT1G03000.1 36.800 250 153 5 158 404 646 893 9.88e-48 175
Msa0187210 AT2G45500.4 34.457 267 151 7 161 421 74 322 1.30e-46 164
Msa0187210 AT2G45500.3 34.457 267 151 7 161 421 74 322 1.30e-46 164
Msa0187210 AT2G03670.2 37.083 240 144 3 171 404 23 261 4.11e-46 164
Msa0187210 AT2G03670.2 39.860 143 85 1 163 304 279 421 6.19e-27 112
Msa0187210 AT2G45500.2 34.457 267 151 7 161 421 207 455 1.65e-45 164
Msa0187210 AT2G45500.1 34.457 267 151 7 161 421 211 459 1.73e-45 164
Msa0187210 AT2G45500.5 34.457 267 151 7 161 421 217 465 2.12e-45 164
Msa0187210 AT1G05910.1 38.431 255 144 5 168 412 379 630 5.09e-45 167
Msa0187210 AT3G01610.1 37.247 247 140 3 159 394 222 464 6.33e-44 164
Msa0187210 AT3G01610.1 34.934 229 144 3 165 392 523 747 1.64e-35 139
Msa0187210 AT3G15120.2 39.076 238 134 5 164 394 723 956 6.62e-44 164
Msa0187210 AT3G01610.2 37.247 247 140 3 159 394 222 464 7.30e-44 164
Msa0187210 AT3G01610.2 34.934 229 144 3 165 392 523 747 1.68e-35 139
Msa0187210 AT3G15120.1 39.076 238 134 5 164 394 713 946 7.62e-44 164
Msa0187210 AT1G80350.1 39.506 243 132 5 161 394 230 466 1.41e-43 160
Msa0187210 AT5G53540.1 38.793 232 128 7 168 393 85 308 9.36e-43 155
Msa0187210 AT4G27680.1 39.224 232 127 7 168 393 82 305 5.09e-42 153
Msa0187210 AT1G50140.3 39.732 224 126 5 169 388 713 931 4.25e-41 156
Msa0187210 AT1G50140.1 39.732 224 126 5 169 388 713 931 4.25e-41 156
Msa0187210 AT1G50140.4 39.732 224 126 5 169 388 713 931 4.25e-41 156
Msa0187210 AT1G50140.2 39.732 224 126 5 169 388 691 909 4.56e-41 156
Msa0187210 AT1G50140.5 39.732 224 126 5 169 388 691 909 4.56e-41 156
Msa0187210 AT5G08470.3 39.496 238 132 5 169 403 834 1062 1.08e-40 155
Msa0187210 AT5G08470.1 39.496 238 132 5 169 403 843 1071 1.11e-40 155
Msa0187210 AT2G27600.1 37.662 231 130 8 161 386 123 344 2.52e-40 149
Msa0187210 AT4G02480.1 37.555 229 134 5 169 393 962 1185 2.94e-40 154
Msa0187210 AT3G19740.1 34.926 272 153 6 169 423 703 967 1.70e-39 151
Msa0187210 AT2G34560.1 36.364 231 143 3 165 394 98 325 2.41e-39 145
Msa0187210 AT2G34560.2 36.364 231 143 3 165 394 107 334 2.73e-39 145
Msa0187210 AT1G02890.1 37.555 229 134 5 169 393 943 1166 4.90e-39 150
Msa0187210 AT4G28000.3 36.123 227 138 4 169 393 519 740 1.11e-37 145
Msa0187210 AT4G28000.2 36.123 227 138 4 169 393 519 740 1.25e-37 145
Msa0187210 AT4G28000.1 36.123 227 138 4 169 393 517 738 1.32e-37 145
Msa0187210 AT4G24860.3 36.771 223 132 5 169 387 817 1034 1.50e-37 145
Msa0187210 AT4G24860.1 36.771 223 132 5 169 387 819 1036 1.60e-37 145
Msa0187210 AT4G24860.4 36.771 223 132 5 169 387 792 1009 1.63e-37 145
Msa0187210 AT4G24860.2 36.771 223 132 5 169 387 815 1032 1.76e-37 145
Msa0187210 AT1G64110.1 33.200 250 154 5 150 393 495 737 7.94e-36 140
Msa0187210 AT1G64110.5 33.200 250 154 5 150 393 498 740 8.05e-36 140
Msa0187210 AT1G64110.3 33.200 250 154 5 150 393 498 740 8.05e-36 140
Msa0187210 AT1G64110.2 33.200 250 154 5 150 393 500 742 8.15e-36 140
Msa0187210 AT1G64110.4 33.200 250 154 5 150 393 500 742 8.15e-36 140
Msa0187210 AT3G27120.1 35.294 238 142 7 161 393 394 624 1.85e-35 139
Msa0187210 AT4G04910.1 30.000 440 241 14 17 418 79 489 3.31e-35 138
Msa0187210 AT5G52882.1 34.361 227 142 4 169 393 516 737 3.73e-35 138
Msa0187210 AT1G79560.3 30.769 234 148 3 179 403 501 729 5.27e-30 123
Msa0187210 AT1G79560.2 30.769 234 148 3 179 403 501 729 5.76e-30 123
Msa0187210 AT1G79560.1 30.769 234 148 3 179 403 501 729 6.37e-30 123
Msa0187210 AT1G62130.2 33.333 222 129 5 169 387 745 950 3.79e-29 120
Msa0187210 AT1G62130.1 33.333 222 129 5 169 387 752 957 3.94e-29 120
Msa0187210 AT4G04180.2 32.889 225 134 8 169 384 313 529 6.65e-25 107
Msa0187210 AT4G04180.1 32.889 225 134 8 169 384 318 534 8.82e-25 107
Msa0187210 AT3G04340.1 31.731 208 136 3 145 351 763 965 1.02e-24 107
Msa0187210 AT1G02890.2 32.314 229 118 6 169 393 943 1138 1.19e-24 107
Msa0187210 AT5G08470.2 38.255 149 87 2 169 316 843 987 1.68e-21 97.8
Msa0187210 AT5G16930.1 32.258 217 116 8 144 353 349 541 1.85e-16 82.0
Msa0187210 AT2G18330.1 33.690 187 102 7 164 346 353 521 1.03e-14 76.6
Msa0187210 AT5G40000.1 34.239 184 96 8 177 345 214 387 1.44e-14 75.9
Msa0187210 AT4G36580.1 28.112 249 127 9 175 389 361 591 2.80e-14 75.5
Msa0187210 AT3G03060.1 35.625 160 89 5 198 353 380 529 4.35e-14 74.7
Msa0187210 AT3G28600.2 31.683 202 111 8 177 361 172 363 1.11e-13 72.8
Msa0187210 AT3G28600.1 31.683 202 111 8 177 361 211 402 1.14e-13 73.2
Msa0187210 AT3G28610.1 32.620 187 98 9 193 361 226 402 7.29e-12 67.4
Msa0187210 AT3G28580.1 26.255 259 153 6 138 370 174 420 1.12e-11 67.0

Find 118 sgRNAs with CRISPR-Local

Find 620 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAGCAGATTTGGGAATT+AGG 0.203524 2_1:-1900211 None:intergenic
TCTTCCTCAGCCTCGTCTTC+TGG 0.228963 2_1:-1901121 None:intergenic
CACAATTTCGGAAAACTTAG+AGG 0.242775 2_1:+1900057 None:intergenic
ATTTAGCACAATAGCAGATT+TGG 0.248087 2_1:-1900219 None:intergenic
GAATTCAGCAGTAGCTGATT+AGG 0.285247 2_1:-1900186 None:intergenic
CGATGGCTTCAACCAATTCT+TGG 0.292529 2_1:-1901730 None:intergenic
GGCTTGCTTTCTTCTTTGCT+TGG 0.296463 2_1:-1904119 None:intergenic
TCAGAAAAGTGGCATTTGTC+TGG 0.309421 2_1:-1901871 None:intergenic
TAGCAGTGATGACCGAATTA+AGG 0.309822 2_1:+1902684 Msa0187210:CDS
AGGGACTGGGAAAACTTTAA+TGG 0.317454 2_1:+1901832 Msa0187210:CDS
CAAAGATAGTTACTTAATCT+TGG 0.330624 2_1:+1901501 Msa0187210:CDS
AATTGATTACATTACGATCT+TGG 0.339157 2_1:-1910957 None:intergenic
ACAATCTTTCTTCCAGTTGT+TGG 0.343456 2_1:+1901430 Msa0187210:CDS
AGTTCTTCAAAATTTACATC+TGG 0.351709 2_1:-1903250 None:intergenic
GAGTTGCTCAATCAGCTTGA+TGG 0.362416 2_1:+1902658 Msa0187210:CDS
GATCCTGCCCTCATGCGTTC+TGG 0.363815 2_1:+1903047 Msa0187210:CDS
AATTCAGCAGTAGCTGATTA+GGG 0.367587 2_1:-1900185 None:intergenic
CGGTGCTCATATTCGCTAAT+TGG 0.368891 2_1:-1900353 None:intergenic
TAGCTTAAGCATAATAGTTC+AGG 0.374037 2_1:-1904140 None:intergenic
CTAGCTCTTGCTTCTTCAGT+TGG 0.375196 2_1:-1903101 None:intergenic
TTGTGAGTCAAGATCAATAT+TGG 0.376702 2_1:-1901149 None:intergenic
TTTAGCACAATAGCAGATTT+GGG 0.380041 2_1:-1900218 None:intergenic
AACAATGTTACCAACAAGAT+AGG 0.382812 2_1:-1900636 None:intergenic
GAACATTCATCTTCCTTGAA+TGG 0.391870 2_1:-1903225 None:intergenic
AGAGTCGCAGAGGACGAATC+TGG 0.398430 2_1:+1900547 Msa0187210:CDS
TTGTCAACAGATCCAAGAAT+TGG 0.409458 2_1:+1901718 Msa0187210:intron
AAACAATTACCCTATCTTGT+TGG 0.411929 2_1:+1900626 Msa0187210:CDS
CCCAAGGGAGTGCTCTTATA+TGG 0.412748 2_1:+1901803 Msa0187210:CDS
TAGCTCTTGCTTCTTCAGTT+GGG 0.414601 2_1:-1903100 None:intergenic
GAGGACGAATTCCTAACTTC+TGG 0.415768 2_1:-1901781 None:intergenic
AAATTGAATTGAAATCGATA+TGG 0.423255 2_1:+1900293 Msa0187210:exon
AATTAAGACAAACCTTAATT+CGG 0.426125 2_1:-1902696 None:intergenic
TTGTCTGGGCTGCACAGGCA+CGG 0.428467 2_1:-1901856 None:intergenic
AAGCGCTCTTTGTGGGTCAT+TGG 0.433595 2_1:-1901758 None:intergenic
TTATATGGTCCACCAGGGAC+TGG 0.443181 2_1:+1901818 Msa0187210:CDS
ATAGATGAAATCGATGCAAT+TGG 0.444462 2_1:+1902414 Msa0187210:CDS
CTGTGTTGAGGCTGGCATGT+TGG 0.447123 2_1:+1903318 Msa0187210:CDS
CTTCTGGAAGCGCTCTTTGT+GGG 0.456356 2_1:-1901765 None:intergenic
GTTCTTCAAAATTTACATCT+GGG 0.460201 2_1:-1903249 None:intergenic
CCTCATGCGTTCTGGTCGAT+TGG 0.460311 2_1:+1903055 Msa0187210:CDS
ACCATATAAGAGCACTCCCT+TGG 0.462776 2_1:-1901804 None:intergenic
AAAGAGCGCTTCCAGAAGTT+AGG 0.468454 2_1:+1901770 Msa0187210:CDS
TGAGTATGATTCTAGAGTTA+AGG 0.468971 2_1:+1901537 Msa0187210:CDS
GGGTCAACAAGTCCAACAAC+TGG 0.470215 2_1:-1901442 None:intergenic
AGCAAGAGCTAGAATTCTGC+AGG 0.476446 2_1:+1903112 Msa0187210:CDS
CTTGCTTCTTCAGTTGGGTG+AGG 0.478295 2_1:-1903095 None:intergenic
GAAGTTAGCAGGCCCTCAGC+TGG 0.481435 2_1:+1901892 Msa0187210:CDS
CTAAAACCTGGTGATCTTGT+TGG 0.482397 2_1:+1901472 Msa0187210:CDS
GCAGTGAAGTGAGTGGGGAC+AGG 0.483517 2_1:+1902614 Msa0187210:intron
ACTTCTGGAAGCGCTCTTTG+TGG 0.494928 2_1:-1901766 None:intergenic
TATATGGTCCACCAGGGACT+GGG 0.495384 2_1:+1901819 Msa0187210:CDS
AAGGCTGTCTGTGTTGAGGC+TGG 0.496605 2_1:+1903310 Msa0187210:CDS
CAGAAAAGTGGCATTTGTCT+GGG 0.501348 2_1:-1901870 None:intergenic
AGCAGGCCCTCAGCTGGTCC+AGG 0.505977 2_1:+1901898 Msa0187210:CDS
CCATATAAGAGCACTCCCTT+GGG 0.506740 2_1:-1901803 None:intergenic
ACGATCTTGGCAAGCTACAT+AGG 0.508959 2_1:-1910944 None:intergenic
TAATAAAATACTTGTGGGAA+AGG 0.510144 2_1:+1900110 Msa0187210:five_prime_UTR
GGCATTTGTCTGGGCTGCAC+AGG 0.513528 2_1:-1901861 None:intergenic
AACTATGTACAGATGTTCAT+AGG 0.516004 2_1:+1902324 Msa0187210:intron
CATTGGTGGATTAGAGAAGC+AGG 0.519493 2_1:+1901600 Msa0187210:CDS
GAAGACGAGGCTGAGGAAGA+TGG 0.522320 2_1:+1901124 Msa0187210:CDS
CGACCAGAACGCATGAGGGC+AGG 0.522529 2_1:-1903050 None:intergenic
TGATCTTGACTCACAAAGGA+AGG 0.522742 2_1:+1901156 Msa0187210:CDS
CGGTCCACAGATGATTTCAA+TGG 0.525527 2_1:+1903277 Msa0187210:CDS
GAATCCAGAAGACGAGGCTG+AGG 0.526999 2_1:+1901117 Msa0187210:CDS
ATGTCATTGTAGTCCTCTGT+TGG 0.531591 2_1:-1901580 None:intergenic
GCCTGCTAACTTCAGAAAAG+TGG 0.540645 2_1:-1901882 None:intergenic
GGATATTTCAGATCCATTCA+AGG 0.542702 2_1:+1903212 Msa0187210:intron
GTGCTCTTATATGGTCCACC+AGG 0.549568 2_1:+1901812 Msa0187210:CDS
TGTCTGGGCTGCACAGGCAC+GGG 0.550265 2_1:-1901855 None:intergenic
CAGTGAAGTGAGTGGGGACA+GGG 0.551580 2_1:+1902615 Msa0187210:intron
GCAGAGGACGAATCTGGAGT+TGG 0.554081 2_1:+1900553 Msa0187210:CDS
ACAATTTCGGAAAACTTAGA+GGG 0.557202 2_1:+1900058 None:intergenic
CTGATTGAGCAACTCTAACA+TGG 0.557612 2_1:-1902650 None:intergenic
CAACGAGATTCGCATCCTCA+AGG 0.561580 2_1:+1900407 Msa0187210:CDS
AATCGATATGGCGAGCGCAA+TGG 0.565450 2_1:+1900305 Msa0187210:exon
GAGGACTACAATGACATTGG+TGG 0.570848 2_1:+1901586 Msa0187210:CDS
ACAATGTTACCAACAAGATA+GGG 0.575470 2_1:-1900635 None:intergenic
GTTAGGAATTCGTCCTCCCA+AGG 0.579890 2_1:+1901787 Msa0187210:CDS
TATTAGTTTAATCTTACGAA+AGG 0.582190 2_1:+1900263 Msa0187210:five_prime_UTR
TTTCAATGGAGCACAACTGA+AGG 0.583966 2_1:+1903291 Msa0187210:CDS
TCTTGTTGGTAACATTGTTG+AGG 0.587858 2_1:+1900640 Msa0187210:CDS
AACCACGAGGACTTTAATGA+AGG 0.588663 2_1:+1904084 Msa0187210:CDS
GGTCATACCTGGACCAGCTG+AGG 0.589442 2_1:-1901905 None:intergenic
TTGCGAGTTGGAAAGCATCA+CGG 0.589651 2_1:-1902365 None:intergenic
TTTACACCAACAAGATCACC+AGG 0.590492 2_1:-1901478 None:intergenic
GGATAAGAGAAAGTCTAACT+TGG 0.593340 2_1:+1904212 Msa0187210:three_prime_UTR
GTACAGATGTTCATAGGAGA+CGG 0.594735 2_1:+1902330 Msa0187210:intron
CCAATCGACCAGAACGCATG+AGG 0.596935 2_1:-1903055 None:intergenic
GATCTTGACTCACAAAGGAA+GGG 0.598782 2_1:+1901157 Msa0187210:CDS
ACTCTAGAATCATACTCAGA+AGG 0.604623 2_1:-1901532 None:intergenic
GTCATACCTGGACCAGCTGA+GGG 0.606521 2_1:-1901904 None:intergenic
CTAATTGCAGTGAAGTGAGT+GGG 0.609083 2_1:+1902608 Msa0187210:intron
TCATCTATAAATATAATGCA+TGG 0.609735 2_1:-1902399 None:intergenic
TGATTCTAGAGTTAAGGCCA+TGG 0.615473 2_1:+1901543 Msa0187210:CDS
GTGGGTCATTGGCAAAACGA+TGG 0.615718 2_1:-1901747 None:intergenic
ACTGAAGGCTGTCTGTGTTG+AGG 0.616412 2_1:+1903306 Msa0187210:CDS
GCTAATTGCAGTGAAGTGAG+TGG 0.625583 2_1:+1902607 Msa0187210:intron
AACAAACCTCAGTTGCATCA+CGG 0.628397 2_1:-1903348 None:intergenic
TACCTTCATTAAAGTCCTCG+TGG 0.630738 2_1:-1904086 None:intergenic
TGCTCCATTGAAATCATCTG+TGG 0.631549 2_1:-1903281 None:intergenic
TATAAGAGCACTCCCTTGGG+AGG 0.633736 2_1:-1901800 None:intergenic
ACAGAGGACTACAATGACAT+TGG 0.634206 2_1:+1901583 Msa0187210:CDS
CAATCGACCAGAACGCATGA+GGG 0.635061 2_1:-1903054 None:intergenic
TCTACGCCGTGATGCAACTG+AGG 0.637539 2_1:+1903342 Msa0187210:CDS
GACCCTGACAAGCTAAAACC+TGG 0.638981 2_1:+1901460 Msa0187210:CDS
TTAGGAATTCGTCCTCCCAA+GGG 0.661598 2_1:+1901788 Msa0187210:CDS
ATATTGATCTTGACTCACAA+AGG 0.667941 2_1:+1901152 Msa0187210:CDS
CAATTTCGGAAAACTTAGAG+GGG 0.670033 2_1:+1900059 None:intergenic
AGAAGCTCTGACGATATCGT+CGG 0.681839 2_1:-1900373 None:intergenic
TGAAGTGAGTGGGGACAGGG+AGG 0.681980 2_1:+1902618 Msa0187210:CDS
GGAAATGAATCCAGAAGACG+AGG 0.689099 2_1:+1901111 Msa0187210:CDS
GGTGAGGAAACTCAATCTTG+CGG 0.696112 2_1:-1903079 None:intergenic
TGATGTAGGAAGAGTCGCAG+AGG 0.711080 2_1:+1900537 Msa0187210:intron
AGTTGATGAAAAGCCAACAG+AGG 0.711108 2_1:+1901567 Msa0187210:CDS
TAATTGCAGTGAAGTGAGTG+GGG 0.713213 2_1:+1902609 Msa0187210:intron
TGCTCTTATATGGTCCACCA+GGG 0.716303 2_1:+1901813 Msa0187210:CDS
TCAAATGTAGGTGAACCACG+AGG 0.808374 2_1:+1904071 Msa0187210:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAATAAAATACTTG+TGG + chr2_1:1900104-1900123 Msa0187210:five_prime_UTR 10.0%
!! AAAAATAATAAAATACTTGT+GGG + chr2_1:1900105-1900124 Msa0187210:five_prime_UTR 10.0%
!! TGAAAAAGAAAAAAAAAATT+GGG - chr2_1:1902495-1902514 None:intergenic 10.0%
!! ATGAAAAAGAAAAAAAAAAT+TGG - chr2_1:1902496-1902515 None:intergenic 10.0%
!! AATTATATATATTTAGAAGT+TGG + chr2_1:1902910-1902929 Msa0187210:intron 10.0%
!! AGTAAAGATTATTTATTTAT+GGG + chr2_1:1906481-1906500 Msa0187210:intron 10.0%
!!! TTCTTTTTGAAAATATATTT+AGG + chr2_1:1908063-1908082 Msa0187210:intron 10.0%
!! TAACAAAAAATAATATTTCA+AGG - chr2_1:1909183-1909202 None:intergenic 10.0%
!!! AATTATATCTTTTATGTTTT+TGG - chr2_1:1909513-1909532 None:intergenic 10.0%
!! ATTATTTGTATTATTGATGT+AGG + chr2_1:1900523-1900542 Msa0187210:intron 15.0%
!! GGCAAATTAATTTAAAAAAT+TGG + chr2_1:1900856-1900875 Msa0187210:intron 15.0%
!! TCTATATACCTATATATAAA+GGG - chr2_1:1901019-1901038 None:intergenic 15.0%
!! ATCTATATACCTATATATAA+AGG - chr2_1:1901020-1901039 None:intergenic 15.0%
!! ATAACAAACAAATCTTAAAA+TGG - chr2_1:1901280-1901299 None:intergenic 15.0%
!! GAATATATTATTGTTAACTA+AGG - chr2_1:1901334-1901353 None:intergenic 15.0%
!! ACAATAATATATTCATAGTT+AGG + chr2_1:1901340-1901359 Msa0187210:intron 15.0%
!! ATGATTAGAAATATATATGA+TGG - chr2_1:1901956-1901975 None:intergenic 15.0%
!!! ATCATATATATTTCTAATCA+TGG + chr2_1:1901955-1901974 Msa0187210:intron 15.0%
!!! TTTTTTTTTCTTTTTCATTG+TGG + chr2_1:1902498-1902517 Msa0187210:intron 15.0%
!!! CAATCTTATAATTTTTATTG+TGG + chr2_1:1902585-1902604 Msa0187210:intron 15.0%
!! TAAATGAAAACCAATAAATT+TGG - chr2_1:1902938-1902957 None:intergenic 15.0%
!!! TTGTTCTATTTATTTTTTTG+AGG + chr2_1:1903161-1903180 Msa0187210:intron 15.0%
!!! TTACCAATAACAATTAATTT+TGG + chr2_1:1903471-1903490 Msa0187210:intron 15.0%
!!! AGAATTTTACTAATTTTAGT+TGG + chr2_1:1903571-1903590 Msa0187210:intron 15.0%
!! ATAAGAAGTAAAATATATGT+TGG - chr2_1:1904008-1904027 None:intergenic 15.0%
!!! TGACATTTATTTACTTATTT+TGG + chr2_1:1904239-1904258 Msa0187210:intron 15.0%
!!! GACATTTATTTACTTATTTT+GGG + chr2_1:1904240-1904259 Msa0187210:intron 15.0%
!!! ACATTTATTTACTTATTTTG+GGG + chr2_1:1904241-1904260 Msa0187210:intron 15.0%
!! GTAAATTAAAAAATTTAGTG+AGG - chr2_1:1904478-1904497 None:intergenic 15.0%
!!! TTTTATTTTTTAGGATATTC+TGG - chr2_1:1904647-1904666 None:intergenic 15.0%
!! AAAAAATTGAGAAAATCAAA+AGG + chr2_1:1904792-1904811 Msa0187210:intron 15.0%
!!! AATATTATTTTTGACGTTTA+TGG + chr2_1:1905313-1905332 Msa0187210:intron 15.0%
!!! TAATAATTATTGATTCGATT+TGG + chr2_1:1905720-1905739 Msa0187210:intron 15.0%
!! TTTAATATTAGTATTGTGTT+TGG - chr2_1:1906044-1906063 None:intergenic 15.0%
!! CAGTAAAGATTATTTATTTA+TGG + chr2_1:1906480-1906499 Msa0187210:intron 15.0%
!!! TTATCTTTCATCTTTTTATT+TGG - chr2_1:1906724-1906743 Msa0187220:intron 15.0%
!! CTAATTTATGAACATATATT+TGG + chr2_1:1907083-1907102 Msa0187210:intron 15.0%
!!! ATATTAGAGATTATTGTTTT+TGG - chr2_1:1907297-1907316 Msa0187220:intron 15.0%
!!! AATTATTTAAAACTAAAGTG+AGG + chr2_1:1907624-1907643 Msa0187210:intron 15.0%
!! AGAAAAGAAAAAACTTAAAA+AGG + chr2_1:1908449-1908468 Msa0187210:intron 15.0%
!!! AAATTATCTTTTGATTAAGT+TGG - chr2_1:1908579-1908598 None:intergenic 15.0%
!!! ATTTTTTAAGAGAGAAAAAT+AGG + chr2_1:1908747-1908766 Msa0187210:intron 15.0%
!!! TTTTTTAAGAGAGAAAAATA+GGG + chr2_1:1908748-1908767 Msa0187210:intron 15.0%
!! TTGTTATAAAAGAAACAAAA+TGG + chr2_1:1909197-1909216 Msa0187210:intron 15.0%
!!! GATTATAGAAAAATTTGTTT+TGG + chr2_1:1909307-1909326 Msa0187210:intron 15.0%
!! ATATTTATACATAGAATAAG+TGG - chr2_1:1909739-1909758 None:intergenic 15.0%
!!! ATATTTTTTTTTTTGAGCAA+AGG - chr2_1:1909827-1909846 None:intergenic 15.0%
!!! ACATTTACTTACTTAATTTT+GGG + chr2_1:1910881-1910900 Msa0187210:intron 15.0%
!! AAATAAACAAATCAAGTAAT+TGG - chr2_1:1910920-1910939 None:intergenic 15.0%
!!! TATTAGTTTAATCTTACGAA+AGG + chr2_1:1900263-1900282 Msa0187210:five_prime_UTR 20.0%
!! AAATTGAATTGAAATCGATA+TGG + chr2_1:1900293-1900312 Msa0187210:exon 20.0%
!! TTATGTAACTTTGTATTGTT+AGG + chr2_1:1900463-1900482 Msa0187210:intron 20.0%
!! TATGTAACTTTGTATTGTTA+GGG + chr2_1:1900464-1900483 Msa0187210:intron 20.0%
!! AATATTGTTCTTATTGTAGT+GGG + chr2_1:1900913-1900932 Msa0187210:intron 20.0%
!!! ACTGATTTTTCTATAATGAA+TGG + chr2_1:1900953-1900972 Msa0187210:intron 20.0%
!! TCTATAATGAATGGTATAAT+TGG + chr2_1:1900962-1900981 Msa0187210:intron 20.0%
!! TAAGTATTCCCTTTATATAT+AGG + chr2_1:1901008-1901027 Msa0187210:intron 20.0%
!! TATAGATTTAGATAATCTTC+TGG + chr2_1:1901033-1901052 Msa0187210:intron 20.0%
!! AATCTTAAAATGGTATGTAT+AGG - chr2_1:1901270-1901289 None:intergenic 20.0%
!! AAAGAAAACTATTGAGTATA+CGG - chr2_1:1901401-1901420 None:intergenic 20.0%
!!! ATGTTTTTATTGTGAATTTG+TGG + chr2_1:1901651-1901670 Msa0187210:intron 20.0%
!! TCAATTGTATTAGAAAATCA+TGG - chr2_1:1902020-1902039 None:intergenic 20.0%
!! AATTGAATAGATGTACAATT+AGG + chr2_1:1902034-1902053 Msa0187210:intron 20.0%
!!! TTGAATTTACATTTTTGCAT+TGG + chr2_1:1902275-1902294 Msa0187210:intron 20.0%
!!! TGAATTTACATTTTTGCATT+GGG + chr2_1:1902276-1902295 Msa0187210:intron 20.0%
!! TCATCTATAAATATAATGCA+TGG - chr2_1:1902402-1902421 None:intergenic 20.0%
!! AATTAAGACAAACCTTAATT+CGG - chr2_1:1902699-1902718 None:intergenic 20.0%
!!! GCATGGTATATTTTTTATTT+AGG + chr2_1:1902728-1902747 Msa0187210:intron 20.0%
!!! TTATTGGTTTTCATTTAGTA+CGG + chr2_1:1902941-1902960 Msa0187210:intron 20.0%
!!! ATTTGATTATTGTTTTCATG+TGG + chr2_1:1903191-1903210 Msa0187210:intron 20.0%
!! TAAATTAGTTGTTCAAAATC+TGG - chr2_1:1903379-1903398 None:intergenic 20.0%
!!! TTATTGGTAATTTACTTCAT+AGG - chr2_1:1903461-1903480 None:intergenic 20.0%
!! CAACCAAAATTAATTGTTAT+TGG - chr2_1:1903477-1903496 None:intergenic 20.0%
!!! CAATAACAATTAATTTTGGT+TGG + chr2_1:1903475-1903494 Msa0187210:intron 20.0%
!! AGTAAAATTCTCTTCAATTA+AGG - chr2_1:1903562-1903581 None:intergenic 20.0%
!!! AAAAAAATTTGAGACTTTAC+AGG + chr2_1:1904191-1904210 Msa0187210:three_prime_UTR 20.0%
!! TCTAATCACATGATTTATTA+AGG + chr2_1:1904275-1904294 Msa0187210:intron 20.0%
!! GAAATCCAAAAATAAGTTAA+TGG - chr2_1:1904319-1904338 None:intergenic 20.0%
!!! CTTATTTTTGGATTTCATTT+TGG + chr2_1:1904323-1904342 Msa0187210:intron 20.0%
!!! TCTTTTAAAGAGAATATCAA+AGG - chr2_1:1904500-1904519 None:intergenic 20.0%
!! AGAATAATATTTAGGAAGAA+GGG - chr2_1:1904735-1904754 None:intergenic 20.0%
!! AAGAATAATATTTAGGAAGA+AGG - chr2_1:1904736-1904755 None:intergenic 20.0%
!! AAAGACGAAGAATAATATTT+AGG - chr2_1:1904743-1904762 None:intergenic 20.0%
!! AATCAAAAGGTAGTATTATT+TGG + chr2_1:1904805-1904824 Msa0187210:intron 20.0%
!! ATCAAAAGGTAGTATTATTT+GGG + chr2_1:1904806-1904825 Msa0187210:intron 20.0%
!! AAATGCATATCCTAAAAATA+AGG + chr2_1:1904833-1904852 Msa0187210:intron 20.0%
!! TAAAAAGTTGTATATGGTTA+GGG + chr2_1:1904946-1904965 Msa0187210:intron 20.0%
!!! TTCATTAATTTTCTTCATTC+TGG - chr2_1:1905260-1905279 None:intergenic 20.0%
!! TCTTCATATTCATACAAAAT+TGG - chr2_1:1905404-1905423 None:intergenic 20.0%
!! GTTCAACTTAAATTATTAAC+CGG + chr2_1:1905805-1905824 Msa0187210:intron 20.0%
!! ACTATAAAATTTCAGTAGTA+TGG - chr2_1:1906141-1906160 None:intergenic 20.0%
!!! CTTTTTTGTGGATAAATAAA+GGG - chr2_1:1906685-1906704 Msa0187220:intron 20.0%
!!! TCTTTTTTGTGGATAAATAA+AGG - chr2_1:1906686-1906705 Msa0187220:intron 20.0%
!! TAGAAAGAAACATTATAGAA+AGG + chr2_1:1907127-1907146 Msa0187210:intron 20.0%
!! CTTAATCTAATACTTGATTA+TGG - chr2_1:1907352-1907371 Msa0187220:intron 20.0%
!! TTAAGAGATAATCATGTTTA+AGG + chr2_1:1907367-1907386 Msa0187210:intron 20.0%
!! TAAGAGATAATCATGTTTAA+GGG + chr2_1:1907368-1907387 Msa0187210:intron 20.0%
!!! ATAAAAACAGAGAAGTTTTA+AGG - chr2_1:1907526-1907545 Msa0187220:intron 20.0%
!!! TTAAAACTTCTCTGTTTTTA+TGG + chr2_1:1907525-1907544 Msa0187210:intron 20.0%
!!! TAAAACTTCTCTGTTTTTAT+GGG + chr2_1:1907526-1907545 Msa0187210:intron 20.0%
!! ATCTTCATTAGATTTAGATA+AGG - chr2_1:1908155-1908174 None:intergenic 20.0%
!! TTGTCAATAAGATAATAGAA+AGG + chr2_1:1908290-1908309 Msa0187210:intron 20.0%
!! TGTCAATAAGATAATAGAAA+GGG + chr2_1:1908291-1908310 Msa0187210:intron 20.0%
!!! GCTAAACATATCTTTTTATT+AGG - chr2_1:1908481-1908500 None:intergenic 20.0%
!!! AGTGTGTTTTTTTTTTTTTG+AGG + chr2_1:1908681-1908700 Msa0187210:intron 20.0%
!!! GTGTGTTTTTTTTTTTTTGA+GGG + chr2_1:1908682-1908701 Msa0187210:intron 20.0%
!!! TTTTTAAGAGAGAAAAATAG+GGG + chr2_1:1908749-1908768 Msa0187210:intron 20.0%
!!! AAGAGATAAGATTGTATTTT+TGG + chr2_1:1909029-1909048 Msa0187210:intron 20.0%
!! CAAAAAATAATATTTCAAGG+AGG - chr2_1:1909180-1909199 None:intergenic 20.0%
!!! ATAGAAAAATTTGTTTTGGT+TGG + chr2_1:1909311-1909330 Msa0187210:intron 20.0%
!!! TAGAAAAATTTGTTTTGGTT+GGG + chr2_1:1909312-1909331 Msa0187210:intron 20.0%
!!! ATGTGAAAATTTGTTTTGAT+CGG + chr2_1:1909379-1909398 Msa0187210:intron 20.0%
!!! AGATTAAGTTAGTATGTTTT+AGG + chr2_1:1909463-1909482 Msa0187210:intron 20.0%
!! CTCTTTGATTATTAATGAAA+TGG + chr2_1:1909791-1909810 Msa0187210:intron 20.0%
!! CTATTATTTAGTGAATTTAG+TGG - chr2_1:1910504-1910523 None:intergenic 20.0%
!!! GATTTTTTTGAACTGAAAAA+TGG - chr2_1:1910820-1910839 None:intergenic 20.0%
!!! GACATTTACTTACTTAATTT+TGG + chr2_1:1910880-1910899 Msa0187210:intron 20.0%
!!! CATTTACTTACTTAATTTTG+GGG + chr2_1:1910882-1910901 Msa0187210:intron 20.0%
! TAATAAAATACTTGTGGGAA+AGG + chr2_1:1900110-1900129 Msa0187210:five_prime_UTR 25.0%
! AAGAATAGAGAGAAGAAAAA+AGG - chr2_1:1900435-1900454 None:intergenic 25.0%
! CAAATAATTCAACCAAAATC+AGG - chr2_1:1900511-1900530 None:intergenic 25.0%
! TATATCTATTTGCTCACATA+TGG + chr2_1:1900794-1900813 Msa0187210:intron 25.0%
! ACATATGGTTATAAACACTA+TGG + chr2_1:1900809-1900828 Msa0187210:intron 25.0%
!! ATACCACAATCGAATAATTT+TGG + chr2_1:1900835-1900854 Msa0187210:intron 25.0%
! CAATATTGTTCTTATTGTAG+TGG + chr2_1:1900912-1900931 Msa0187210:intron 25.0%
! AGAAAAATCAGTGTTACAAT+AGG - chr2_1:1900945-1900964 None:intergenic 25.0%
!!! TTGCTGATAATGGATTTTAA+TGG + chr2_1:1901058-1901077 Msa0187210:intron 25.0%
!!! ATGGATTTTAATGGTTTTTC+TGG + chr2_1:1901067-1901086 Msa0187210:intron 25.0%
!!! TGGATTTTAATGGTTTTTCT+GGG + chr2_1:1901068-1901087 Msa0187210:intron 25.0%
! GCTATGCATAATTTAGATAT+TGG + chr2_1:1901090-1901109 Msa0187210:intron 25.0%
! CAAAGATAGTTACTTAATCT+TGG + chr2_1:1901501-1901520 Msa0187210:CDS 25.0%
! TAAGAAAAAACAGATTCAGA+TGG - chr2_1:1901929-1901948 None:intergenic 25.0%
! TTGACACAAACAATGAAAAA+TGG - chr2_1:1901990-1902009 None:intergenic 25.0%
! ATTGTATTAGAAAATCATGG+AGG - chr2_1:1902017-1902036 None:intergenic 25.0%
! GGGATATTAAAACATAAGAA+TGG - chr2_1:1902210-1902229 None:intergenic 25.0%
!! TCTTAATTTTCTTATCTGCA+TGG + chr2_1:1902711-1902730 Msa0187210:intron 25.0%
!! GTTCTTAAATGCTGTATTTT+AGG + chr2_1:1902810-1902829 Msa0187210:intron 25.0%
! TTGAAGGTCAACAAAATTAT+GGG - chr2_1:1902839-1902858 None:intergenic 25.0%
! ATTGAAGGTCAACAAAATTA+TGG - chr2_1:1902840-1902859 None:intergenic 25.0%
!!! TAAAAAAGTTGGTAGATTGA+AGG - chr2_1:1902855-1902874 None:intergenic 25.0%
! TTGACAAGTGTAAATGAAAA+TGG - chr2_1:1902988-1903007 None:intergenic 25.0%
! GTTCTTCAAAATTTACATCT+GGG - chr2_1:1903252-1903271 None:intergenic 25.0%
! AGTTCTTCAAAATTTACATC+TGG - chr2_1:1903253-1903272 None:intergenic 25.0%
!!! TAAATTTTGAAGAACTAGCT+CGG + chr2_1:1903257-1903276 Msa0187210:CDS 25.0%
! ATATCTTGTAAGATGATTCA+GGG - chr2_1:1903406-1903425 None:intergenic 25.0%
! TATATCTTGTAAGATGATTC+AGG - chr2_1:1903407-1903426 None:intergenic 25.0%
!!! AAAACAAAACTAGCTTGTTA+GGG - chr2_1:1903523-1903542 None:intergenic 25.0%
! AGCTTAATAGTTATACGTTT+AGG + chr2_1:1903808-1903827 Msa0187210:intron 25.0%
! CAAAAATGGCAAAATCATTA+TGG - chr2_1:1903955-1903974 None:intergenic 25.0%
!!! GCACTGATTTAAAACAAAAA+TGG - chr2_1:1903969-1903988 None:intergenic 25.0%
! TGAAACAAAAAGAGATAGAA+AGG - chr2_1:1904054-1904073 None:intergenic 25.0%
!!! TCTCTTTTTGTTTCAAATGT+AGG + chr2_1:1904059-1904078 Msa0187210:intron 25.0%
!!! TTGGTCCATTAACTTATTTT+TGG + chr2_1:1904311-1904330 Msa0187210:intron 25.0%
! ATTGAGACACTTTATAGTTA+GGG - chr2_1:1904351-1904370 None:intergenic 25.0%
! AATTGAGACACTTTATAGTT+AGG - chr2_1:1904352-1904371 None:intergenic 25.0%
!! AACTATAAAGTGTCTCAATT+TGG + chr2_1:1904352-1904371 Msa0187210:intron 25.0%
! AAAAAATTTAGTGAGGCATA+TGG - chr2_1:1904471-1904490 None:intergenic 25.0%
!!! GAAGATGAATGGATTTTATT+AGG - chr2_1:1904574-1904593 None:intergenic 25.0%
! AGTAAAAACACATGAATTTG+AGG + chr2_1:1904877-1904896 Msa0187210:intron 25.0%
! GTAAAAAGTTGTATATGGTT+AGG + chr2_1:1904945-1904964 Msa0187210:intron 25.0%
!! AGGGTTTTCAAAAATCAATT+TGG + chr2_1:1904965-1904984 Msa0187210:intron 25.0%
!! GGGTTTTCAAAAATCAATTT+GGG + chr2_1:1904966-1904985 Msa0187210:intron 25.0%
!! GGTTTTCAAAAATCAATTTG+GGG + chr2_1:1904967-1904986 Msa0187210:intron 25.0%
!!! CTTTGTTTTGAAAAACTGAA+TGG + chr2_1:1905099-1905118 Msa0187210:intron 25.0%
!!! TTTTGAAAAACTGAATGGAT+GGG + chr2_1:1905104-1905123 Msa0187210:intron 25.0%
!!! AATATTTGGTACTGGTTTTA+TGG + chr2_1:1905149-1905168 Msa0187210:intron 25.0%
! ACTAATTCAAATATAACACG+TGG - chr2_1:1905564-1905583 None:intergenic 25.0%
!!! TATTGTTTTAGCACAAGAAT+GGG + chr2_1:1905775-1905794 Msa0187210:intron 25.0%
! TAAATTATTAACCGGATATG+AGG + chr2_1:1905813-1905832 Msa0187210:intron 25.0%
!! GAGTTTCGTATTTTCTAATT+AGG - chr2_1:1906226-1906245 Msa0187220:three_prime_UTR 25.0%
!! TATGTTACTCTAGTGATTTT+GGG - chr2_1:1906281-1906300 Msa0187220:three_prime_UTR 25.0%
!! TTATGTTACTCTAGTGATTT+TGG - chr2_1:1906282-1906301 Msa0187220:three_prime_UTR 25.0%
!!! ATTAAGTTCTCTCTTTTTTG+TGG - chr2_1:1906697-1906716 Msa0187220:intron 25.0%
! GATGAAATACATACAATTGT+AGG + chr2_1:1906745-1906764 Msa0187210:intron 25.0%
! ATTACACAACAATCAACTTT+AGG + chr2_1:1907060-1907079 Msa0187210:intron 25.0%
! TTGTGACAGGATTAAATTTA+TGG - chr2_1:1907427-1907446 Msa0187220:intron 25.0%
! GAAATTCATTCACTAAATAC+AGG + chr2_1:1907683-1907702 Msa0187210:intron 25.0%
!! TCGTTTGTATTTCTTTTCAT+AGG - chr2_1:1907744-1907763 Msa0187220:intron 25.0%
! AAAAATCTCAAAGATGATGA+TGG + chr2_1:1907775-1907794 Msa0187210:intron 25.0%
! GATTTAGATAAGGAGATTAT+AGG - chr2_1:1908145-1908164 None:intergenic 25.0%
!! CGGTTCAAATATAATTTTTG+TGG - chr2_1:1908223-1908242 None:intergenic 25.0%
! ACAATTCCTTACTGAAAAAA+CGG - chr2_1:1908243-1908262 None:intergenic 25.0%
! TCAAAATAGAAATAAGATGC+TGG + chr2_1:1908347-1908366 Msa0187210:intron 25.0%
! CATACCCAAAAAAAAATCAT+TGG + chr2_1:1908401-1908420 Msa0187210:intron 25.0%
!!! CATGCCAATGATTTTTTTTT+GGG - chr2_1:1908408-1908427 None:intergenic 25.0%
!!! ACATGCCAATGATTTTTTTT+TGG - chr2_1:1908409-1908428 None:intergenic 25.0%
! AACAACACAGAGAATAAATT+TGG + chr2_1:1908510-1908529 Msa0187210:intron 25.0%
! TGCTAAAAAATTTAAGGAAC+CGG - chr2_1:1908555-1908574 None:intergenic 25.0%
! GTTGGATGCTAAAAAATTTA+AGG - chr2_1:1908561-1908580 None:intergenic 25.0%
! ACGTGTCAAAAAATTAAGAA+GGG + chr2_1:1908604-1908623 Msa0187210:intron 25.0%
!!! TTTTAAGAGAGAAAAATAGG+GGG + chr2_1:1908750-1908769 Msa0187210:intron 25.0%
!! TTTGATGAAGTGTTAATAAG+AGG + chr2_1:1908805-1908824 Msa0187210:intron 25.0%
! TTTGTAACAGAGAAAAATAG+AGG + chr2_1:1908948-1908967 Msa0187210:intron 25.0%
! TAAAATATGTTGAGATGAGA+TGG + chr2_1:1909221-1909240 Msa0187210:intron 25.0%
!!! ATGTTTTAGGAGAGAAAAAT+AGG + chr2_1:1909476-1909495 Msa0187210:intron 25.0%
!!! TGTTTTAGGAGAGAAAAATA+GGG + chr2_1:1909477-1909496 Msa0187210:intron 25.0%
! AATACAATCTTACCATTTCT+TGG - chr2_1:1909555-1909574 None:intergenic 25.0%
!! ATACATAGAATAAGTGGATT+TGG - chr2_1:1909733-1909752 None:intergenic 25.0%
!!! GAGGGTTTTTTTATTTTGAA+AGG - chr2_1:1909883-1909902 None:intergenic 25.0%
! CCTTTGAACAAAATATCAAT+CGG - chr2_1:1909909-1909928 None:intergenic 25.0%
!! ATTGTGCTCATTTTATTGAT+CGG - chr2_1:1909972-1909991 None:intergenic 25.0%
! TACAATCTTCTTAATGATGT+AGG - chr2_1:1910225-1910244 None:intergenic 25.0%
!!! ATATTGATATGCAGTTTTGT+CGG + chr2_1:1910338-1910357 Msa0187210:intron 25.0%
!! TGAATTTAGTGGATGAAATT+TGG - chr2_1:1910493-1910512 None:intergenic 25.0%
!!! ATTTCATCTCTATTTTGAAG+CGG - chr2_1:1910578-1910597 None:intergenic 25.0%
! TTTGATTACTACACAAGAAT+TGG - chr2_1:1910607-1910626 None:intergenic 25.0%
! GTCAATCAACAACTATATAA+AGG - chr2_1:1910630-1910649 None:intergenic 25.0%
! ACAAGAAGCAAATTATATGA+TGG - chr2_1:1910688-1910707 None:intergenic 25.0%
! TGAAACAAAATGAGATAGAA+AGG - chr2_1:1910734-1910753 None:intergenic 25.0%
! AATTGATTACATTACGATCT+TGG - chr2_1:1910960-1910979 None:intergenic 25.0%
TTTAGCACAATAGCAGATTT+GGG - chr2_1:1900221-1900240 None:intergenic 30.0%
ATTTAGCACAATAGCAGATT+TGG - chr2_1:1900222-1900241 None:intergenic 30.0%
CTAATAACGTCAATCGAAAT+AGG - chr2_1:1900249-1900268 None:intergenic 30.0%
AAACAATTACCCTATCTTGT+TGG + chr2_1:1900626-1900645 Msa0187210:CDS 30.0%
ACAATGTTACCAACAAGATA+GGG - chr2_1:1900638-1900657 None:intergenic 30.0%
AACAATGTTACCAACAAGAT+AGG - chr2_1:1900639-1900658 None:intergenic 30.0%
!! TAGTGTTGTATGCTGATTTA+GGG + chr2_1:1900730-1900749 Msa0187210:intron 30.0%
!!! ATGCTGATTTAGGGTTTTAT+TGG + chr2_1:1900739-1900758 Msa0187210:intron 30.0%
!!! TGCTGATTTAGGGTTTTATT+GGG + chr2_1:1900740-1900759 Msa0187210:intron 30.0%
TTGCCAAAATTATTCGATTG+TGG - chr2_1:1900841-1900860 None:intergenic 30.0%
TTGTGAGTCAAGATCAATAT+TGG - chr2_1:1901152-1901171 None:intergenic 30.0%
ATATTGATCTTGACTCACAA+AGG + chr2_1:1901152-1901171 Msa0187210:CDS 30.0%
!!! TTTTTTCCCCTTCTGTTTTT+AGG + chr2_1:1901306-1901325 Msa0187210:intron 30.0%
!!! TTTTTCCCCTTCTGTTTTTA+GGG + chr2_1:1901307-1901326 Msa0187210:intron 30.0%
!! TGAGTATGATTCTAGAGTTA+AGG + chr2_1:1901537-1901556 Msa0187210:CDS 30.0%
ACTGAAGATAACAGAAAATC+AGG - chr2_1:1902060-1902079 None:intergenic 30.0%
AAATCTTTGTACAATCAGCA+GGG - chr2_1:1902128-1902147 None:intergenic 30.0%
AAAATCTTTGTACAATCAGC+AGG - chr2_1:1902129-1902148 None:intergenic 30.0%
!! ATTTTCAACACAAACTTGCT+TGG + chr2_1:1902174-1902193 Msa0187210:intron 30.0%
ATGAAGGAAGGAAAAATAGA+GGG - chr2_1:1902235-1902254 None:intergenic 30.0%
AATGAAGGAAGGAAAAATAG+AGG - chr2_1:1902236-1902255 None:intergenic 30.0%
TCAATTTATACAGACAACGA+AGG - chr2_1:1902259-1902278 None:intergenic 30.0%
AACTATGTACAGATGTTCAT+AGG + chr2_1:1902324-1902343 Msa0187210:intron 30.0%
ATAGATGAAATCGATGCAAT+TGG + chr2_1:1902414-1902433 Msa0187210:CDS 30.0%
TACGTATCATAGATGAATAC+TGG + chr2_1:1902760-1902779 Msa0187210:intron 30.0%
! GAAGGTAGTCTTAAAAAAGT+TGG - chr2_1:1902866-1902885 None:intergenic 30.0%
! CTTCAATCTAAAACCTTGAA+GGG + chr2_1:1902882-1902901 Msa0187210:intron 30.0%
ATATAATTAATCGCCCTTCA+AGG - chr2_1:1902898-1902917 None:intergenic 30.0%
GAAGTTGGAACCAAATTTAT+TGG + chr2_1:1902925-1902944 Msa0187210:intron 30.0%
CAAGTGTAAATGAAAATGGA+GGG - chr2_1:1902984-1903003 None:intergenic 30.0%
ACAAGTGTAAATGAAAATGG+AGG - chr2_1:1902985-1903004 None:intergenic 30.0%
!! AAACAAAACTAGCTTGTTAG+GGG - chr2_1:1903522-1903541 None:intergenic 30.0%
!! GAAAACAAAACTAGCTTGTT+AGG - chr2_1:1903524-1903543 None:intergenic 30.0%
TCATTATGGCAACTATAGAA+AGG - chr2_1:1903941-1903960 None:intergenic 30.0%
TAGCTTAAGCATAATAGTTC+AGG - chr2_1:1904143-1904162 None:intergenic 30.0%
TTAAGGCTTAATACATGCTT+TGG + chr2_1:1904292-1904311 Msa0187210:intron 30.0%
TTGAGACACTTTATAGTTAG+GGG - chr2_1:1904350-1904369 None:intergenic 30.0%
! TTTTTAACATCAGATGCCTA+AGG + chr2_1:1904421-1904440 Msa0187210:intron 30.0%
CTTTAAATATGGTTCACCTT+AGG - chr2_1:1904440-1904459 None:intergenic 30.0%
CTAAGGTGAACCATATTTAA+AGG + chr2_1:1904438-1904457 Msa0187210:intron 30.0%
ATAGACCCTACATGATTTAA+CGG - chr2_1:1904526-1904545 None:intergenic 30.0%
! TGGATTTTATTAGGTGTTAG+TGG - chr2_1:1904565-1904584 None:intergenic 30.0%
! AAAACACATGAATTTGAGGT+AGG + chr2_1:1904881-1904900 Msa0187210:intron 30.0%
! AAACACATGAATTTGAGGTA+GGG + chr2_1:1904882-1904901 Msa0187210:intron 30.0%
TCGTCGTAAAAAGTTGTATA+TGG + chr2_1:1904940-1904959 Msa0187210:intron 30.0%
!!! GTTTTGAAAAACTGAATGGA+TGG + chr2_1:1905103-1905122 Msa0187210:intron 30.0%
TCGTGAACAGAGAAAATATT+TGG + chr2_1:1905135-1905154 Msa0187210:intron 30.0%
ACAGAGAAAATATTTGGTAC+TGG + chr2_1:1905141-1905160 Msa0187210:intron 30.0%
! AAGTGCTTTGAATTGAAAAC+AGG + chr2_1:1905357-1905376 Msa0187210:intron 30.0%
! AGTGCTTTGAATTGAAAACA+GGG + chr2_1:1905358-1905377 Msa0187210:intron 30.0%
GTATGAATATGAAGAAGTGA+TGG + chr2_1:1905409-1905428 Msa0187210:intron 30.0%
!!! TGAAGACAGGGAAATTTTTT+TGG + chr2_1:1905443-1905462 Msa0187210:intron 30.0%
TGTCTGGATCATGAATAATT+TGG + chr2_1:1905641-1905660 Msa0187210:intron 30.0%
!!! GTATTGTTTTAGCACAAGAA+TGG + chr2_1:1905774-1905793 Msa0187210:intron 30.0%
TGAAGTTAGAAGTTACTAGT+AGG - chr2_1:1905994-1906013 None:intergenic 30.0%
!!! ATCAATGTTGCAGTTTTGTT+GGG - chr2_1:1906448-1906467 Msa0187220:intron 30.0%
!! AATCAATGTTGCAGTTTTGT+TGG - chr2_1:1906449-1906468 Msa0187220:intron 30.0%
AATTGCTTCTTATCAAAAGC+TGG + chr2_1:1906888-1906907 Msa0187210:intron 30.0%
TTGATATTGTTGACACTTTC+AGG - chr2_1:1906926-1906945 Msa0187220:CDS 30.0%
AACAATATCAACCACTTTGA+CGG + chr2_1:1906935-1906954 Msa0187210:intron 30.0%
GTAATGTGATTATTTGCAGT+GGG - chr2_1:1907045-1907064 Msa0187220:intron 30.0%
TGTAATGTGATTATTTGCAG+TGG - chr2_1:1907046-1907065 Msa0187220:intron 30.0%
AATTGAGAATGGAATGTTGT+GGG - chr2_1:1907182-1907201 Msa0187220:CDS 30.0%
AAATTGAGAATGGAATGTTG+TGG - chr2_1:1907183-1907202 Msa0187220:CDS 30.0%
!!! TTATTGTTTTTGGTTGCTGA+TGG - chr2_1:1907287-1907306 Msa0187220:intron 30.0%
! TTATGTTGTTTGTGTTCTGT+TGG - chr2_1:1907482-1907501 Msa0187220:intron 30.0%
AAGAAGAGAGAACTAAAAGA+AGG + chr2_1:1907863-1907882 Msa0187210:intron 30.0%
AGTGAGATTGAATAGAATAG+AGG + chr2_1:1907906-1907925 Msa0187210:intron 30.0%
ATAATGAAGAGTTCAAGTGA+TGG + chr2_1:1907950-1907969 Msa0187210:intron 30.0%
!!! TTTGAACCGTTTTTTCAGTA+AGG + chr2_1:1908234-1908253 Msa0187210:intron 30.0%
! GAATTGTCAAGAAAGTATGA+TGG + chr2_1:1908256-1908275 Msa0187210:intron 30.0%
!!! TTTTTGGGTATGTATGAGTT+AGG - chr2_1:1908393-1908412 None:intergenic 30.0%
AACACAGAGAATAAATTTGG+AGG + chr2_1:1908513-1908532 Msa0187210:intron 30.0%
GACGTGTCAAAAAATTAAGA+AGG + chr2_1:1908603-1908622 Msa0187210:intron 30.0%
CGTGTCAAAAAATTAAGAAG+GGG + chr2_1:1908605-1908624 Msa0187210:intron 30.0%
AAGAGGTAAGATTGTATTTG+TGG + chr2_1:1908822-1908841 Msa0187210:intron 30.0%
!!! GTTTTAGGAGAGAAAAATAG+GGG + chr2_1:1909478-1909497 Msa0187210:intron 30.0%
!! TTTTAGGAGAGAAAAATAGG+GGG + chr2_1:1909479-1909498 Msa0187210:intron 30.0%
ATCCAAATTATTCCTATTCG+AGG + chr2_1:1909668-1909687 Msa0187210:intron 30.0%
ATCCTCGAATAGGAATAATT+TGG - chr2_1:1909673-1909692 None:intergenic 30.0%
! TAAGTGGATTTGGAAGAATT+TGG - chr2_1:1909723-1909742 None:intergenic 30.0%
TGAACAAAATATCAATCGGA+TGG - chr2_1:1909905-1909924 None:intergenic 30.0%
! CCGATTGATATTTTGTTCAA+AGG + chr2_1:1909906-1909925 Msa0187210:intron 30.0%
!! TTAATGATGTAGGTTGGTAA+CGG - chr2_1:1910215-1910234 None:intergenic 30.0%
ATCTTCTTAATGATGTAGGT+TGG - chr2_1:1910221-1910240 None:intergenic 30.0%
CAAAATAATAGACGCAAAAG+AGG - chr2_1:1910420-1910439 None:intergenic 30.0%
AATTCAGCAGTAGCTGATTA+GGG - chr2_1:1900188-1900207 None:intergenic 35.0%
CAATAGCAGATTTGGGAATT+AGG - chr2_1:1900214-1900233 None:intergenic 35.0%
AGAAGAAAAAAGGAACCTTG+AGG - chr2_1:1900425-1900444 None:intergenic 35.0%
! TTTTGTTGCGTTCCTGATTT+TGG + chr2_1:1900496-1900515 Msa0187210:intron 35.0%
!! TCTTGTTGGTAACATTGTTG+AGG + chr2_1:1900640-1900659 Msa0187210:CDS 35.0%
!! CTAGTGTTGTATGCTGATTT+AGG + chr2_1:1900729-1900748 Msa0187210:intron 35.0%
!! TCTTCTGGATTTGCTGATAA+TGG + chr2_1:1901048-1901067 Msa0187210:intron 35.0%
!!! TTTTCCCCTTCTGTTTTTAG+GGG + chr2_1:1901308-1901327 Msa0187210:intron 35.0%
ACAATCTTTCTTCCAGTTGT+TGG + chr2_1:1901430-1901449 Msa0187210:CDS 35.0%
!! ACTCTAGAATCATACTCAGA+AGG - chr2_1:1901535-1901554 None:intergenic 35.0%
TTGTCAACAGATCCAAGAAT+TGG + chr2_1:1901718-1901737 Msa0187210:intron 35.0%
AATCTTTGTACAATCAGCAG+GGG - chr2_1:1902127-1902146 None:intergenic 35.0%
GAACATCTGTACATAGTTTC+AGG - chr2_1:1902322-1902341 None:intergenic 35.0%
!! TTGGTACAAAGCGTTTTGAT+AGG + chr2_1:1902433-1902452 Msa0187210:CDS 35.0%
!! GGTATGAAATTTTAGCATGC+AGG + chr2_1:1902454-1902473 Msa0187210:intron 35.0%
!! TCATAGATGAATACTGGCTT+TGG + chr2_1:1902766-1902785 Msa0187210:intron 35.0%
!! CATAGATGAATACTGGCTTT+GGG + chr2_1:1902767-1902786 Msa0187210:intron 35.0%
AAGGTCAACAAAATTATGGG+AGG - chr2_1:1902836-1902855 None:intergenic 35.0%
!!! CCTTCAAGGTTTTAGATTGA+AGG - chr2_1:1902884-1902903 None:intergenic 35.0%
! CCTTCAATCTAAAACCTTGA+AGG + chr2_1:1902881-1902900 Msa0187210:intron 35.0%
CATTTACACTTGTCAATTGC+AGG + chr2_1:1902992-1903011 Msa0187210:intron 35.0%
AACAAAGCAGATGAAGTATG+AGG - chr2_1:1903146-1903165 None:intergenic 35.0%
GGATATTTCAGATCCATTCA+AGG + chr2_1:1903212-1903231 Msa0187210:intron 35.0%
GAACATTCATCTTCCTTGAA+TGG - chr2_1:1903228-1903247 None:intergenic 35.0%
!! TTTTGGTTGGACATTTGTCT+TGG + chr2_1:1903488-1903507 Msa0187210:intron 35.0%
TAATCGCTTGAACTACCAAT+GGG - chr2_1:1903781-1903800 None:intergenic 35.0%
TTAATCGCTTGAACTACCAA+TGG - chr2_1:1903782-1903801 None:intergenic 35.0%
TCTTATATGACCTGTTGATG+TGG + chr2_1:1904022-1904041 Msa0187210:intron 35.0%
CTTATATGACCTGTTGATGT+GGG + chr2_1:1904023-1904042 Msa0187210:intron 35.0%
GGATAAGAGAAAGTCTAACT+TGG + chr2_1:1904212-1904231 Msa0187210:three_prime_UTR 35.0%
AGGTGAACCATATTTAAAGG+TGG + chr2_1:1904441-1904460 Msa0187210:intron 35.0%
AAATTTAGTGAGGCATATGG+TGG - chr2_1:1904468-1904487 None:intergenic 35.0%
AGATGACCGTTAAATCATGT+AGG + chr2_1:1904517-1904536 Msa0187210:intron 35.0%
GATGACCGTTAAATCATGTA+GGG + chr2_1:1904518-1904537 Msa0187210:intron 35.0%
TGAGGAAAGAAGAAGATGAA+TGG - chr2_1:1904585-1904604 None:intergenic 35.0%
TTGAAGATCATGAAGAGATG+AGG - chr2_1:1904603-1904622 None:intergenic 35.0%
TTGTGTGGTGATATAAGAGT+AGG - chr2_1:1904678-1904697 None:intergenic 35.0%
ATAGCTGAAGATGACAATGA+TGG - chr2_1:1904701-1904720 None:intergenic 35.0%
!!! CCATCGATCACCTTATTTTT+AGG - chr2_1:1904846-1904865 None:intergenic 35.0%
CCTAAAAATAAGGTGATCGA+TGG + chr2_1:1904843-1904862 Msa0187210:intron 35.0%
AAAAATAAGGTGATCGATGG+AGG + chr2_1:1904846-1904865 Msa0187210:intron 35.0%
AAAATAAGGTGATCGATGGA+GGG + chr2_1:1904847-1904866 Msa0187210:intron 35.0%
! ACTTTTTACGACGATGTTGA+AGG - chr2_1:1904934-1904953 None:intergenic 35.0%
AATCAATTTGGGGACAACAA+TGG + chr2_1:1904977-1904996 Msa0187210:intron 35.0%
CAAAACAAAGAAATTCTCGC+CGG - chr2_1:1905089-1905108 None:intergenic 35.0%
! GTGCTTTGAATTGAAAACAG+GGG + chr2_1:1905359-1905378 Msa0187210:intron 35.0%
! GAATATGAAGAAGTGATGGA+AGG + chr2_1:1905413-1905432 Msa0187210:intron 35.0%
!!! CAGGGAAATTTTTTTGGTGT+TGG + chr2_1:1905449-1905468 Msa0187210:intron 35.0%
!!! GGAAATTTTTTTGGTGTTGG+TGG + chr2_1:1905452-1905471 Msa0187210:intron 35.0%
ACAATAGACATGCAATCGAA+TGG + chr2_1:1905488-1905507 Msa0187210:intron 35.0%
GCTAAAACAATACCAGTTCA+TGG - chr2_1:1905767-1905786 None:intergenic 35.0%
TTGACCATTTGGGAAGTTTA+TGG - chr2_1:1905908-1905927 None:intergenic 35.0%
! AAAGGCACATTTGACCATTT+GGG - chr2_1:1905918-1905937 None:intergenic 35.0%
! TAGTAGGTAGTTGGAGTTTT+TGG - chr2_1:1905978-1905997 None:intergenic 35.0%
AGAAGTTACTAGTAGGTAGT+TGG - chr2_1:1905987-1906006 None:intergenic 35.0%
!!! CTCTAGTGATTTTGGGATTT+TGG - chr2_1:1906274-1906293 Msa0187220:intron 35.0%
GCACGTTTAGTTATCATGTT+AGG - chr2_1:1906317-1906336 Msa0187220:three_prime_UTR 35.0%
! ACTTTTCTCTACTTTGCCTA+TGG - chr2_1:1906362-1906381 Msa0187220:CDS 35.0%
TAGGCAAAGTAGAGAAAAGT+TGG + chr2_1:1906362-1906381 Msa0187210:intron 35.0%
!!! TCAATGTTGCAGTTTTGTTG+GGG - chr2_1:1906447-1906466 Msa0187220:intron 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG - chr2_1:1906662-1906681 Msa0187220:intron 35.0%
AATTGTAGGTCCTTGAGTTT+AGG + chr2_1:1906759-1906778 Msa0187210:intron 35.0%
ATTGTAGGTCCTTGAGTTTA+GGG + chr2_1:1906760-1906779 Msa0187210:intron 35.0%
!! TTGAACAACTCTTGCTTTTC+TGG + chr2_1:1906816-1906835 Msa0187210:intron 35.0%
CTTTGCTGACGAATTTCTTT+AGG - chr2_1:1907241-1907260 Msa0187220:intron 35.0%
ATTTACCTGTAAGAAGATCC+TGG + chr2_1:1907798-1907817 Msa0187210:intron 35.0%
GAGATTGAATAGAATAGAGG+TGG + chr2_1:1907909-1907928 Msa0187210:intron 35.0%
! TGTCAAGAAAGTATGATGGA+AGG + chr2_1:1908260-1908279 Msa0187210:intron 35.0%
! GTCAAGAAAGTATGATGGAA+GGG + chr2_1:1908261-1908280 Msa0187210:intron 35.0%
TGGAATTAGATGAGCATCAT+TGG + chr2_1:1908367-1908386 Msa0187210:intron 35.0%
GGCATGTTTCTCATATCAAA+CGG + chr2_1:1908422-1908441 Msa0187210:intron 35.0%
! AGGAGCTTTATCTAAAACAC+CGG + chr2_1:1908533-1908552 Msa0187210:intron 35.0%
CGTGTCAAAAAACCAAGAAA+TGG + chr2_1:1909540-1909559 Msa0187210:intron 35.0%
! ATCAAAGAGTACAAGTAGTC+AGG - chr2_1:1909780-1909799 None:intergenic 35.0%
CAAAATATCAATCGGATGGA+GGG - chr2_1:1909901-1909920 None:intergenic 35.0%
ACAAAATATCAATCGGATGG+AGG - chr2_1:1909902-1909921 None:intergenic 35.0%
!! TGAAGAAAGTATCAATCGGA+TGG - chr2_1:1909948-1909967 None:intergenic 35.0%
!! CGGTTGAAGAAAGTATCAAT+CGG - chr2_1:1909952-1909971 None:intergenic 35.0%
!!! ATGTGTTTTAGTCCGCTTTT+GGG - chr2_1:1910120-1910139 None:intergenic 35.0%
!!! AATGTGTTTTAGTCCGCTTT+TGG - chr2_1:1910121-1910140 None:intergenic 35.0%
!! TGCAGTTTTGTCGGAAATAT+TGG + chr2_1:1910347-1910366 Msa0187210:intron 35.0%
GAATTCAGCAGTAGCTGATT+AGG - chr2_1:1900189-1900208 None:intergenic 40.0%
TGATCTTGACTCACAAAGGA+AGG + chr2_1:1901156-1901175 Msa0187210:CDS 40.0%
GATCTTGACTCACAAAGGAA+GGG + chr2_1:1901157-1901176 Msa0187210:CDS 40.0%
GCTAAAAACATCTACTCGAC+AGG + chr2_1:1901192-1901211 Msa0187210:CDS 40.0%
ACCATTCATAACGTTTCGAG+TGG + chr2_1:1901223-1901242 Msa0187210:intron 40.0%
TCCACTCGAAACGTTATGAA+TGG - chr2_1:1901227-1901246 None:intergenic 40.0%
TAAGGCCCCTAAAAACAGAA+GGG - chr2_1:1901316-1901335 None:intergenic 40.0%
CTAAAACCTGGTGATCTTGT+TGG + chr2_1:1901472-1901491 Msa0187210:CDS 40.0%
TTTACACCAACAAGATCACC+AGG - chr2_1:1901481-1901500 None:intergenic 40.0%
!! TGATTCTAGAGTTAAGGCCA+TGG + chr2_1:1901543-1901562 Msa0187210:CDS 40.0%
! TGGCTTTTCATCAACTTCCA+TGG - chr2_1:1901563-1901582 None:intergenic 40.0%
!! AGTTGATGAAAAGCCAACAG+AGG + chr2_1:1901567-1901586 Msa0187210:CDS 40.0%
ATGTCATTGTAGTCCTCTGT+TGG - chr2_1:1901583-1901602 None:intergenic 40.0%
ACAGAGGACTACAATGACAT+TGG + chr2_1:1901583-1901602 Msa0187210:CDS 40.0%
TTTGTGGCCAGTGATATAAC+TGG + chr2_1:1901667-1901686 Msa0187210:intron 40.0%
GATCCATCCAGTTATATCAC+TGG - chr2_1:1901677-1901696 None:intergenic 40.0%
! ATTAAAGTTTTCCCAGTCCC+TGG - chr2_1:1901833-1901852 None:intergenic 40.0%
AGGGACTGGGAAAACTTTAA+TGG + chr2_1:1901832-1901851 Msa0187210:CDS 40.0%
CAGAAAAGTGGCATTTGTCT+GGG - chr2_1:1901873-1901892 None:intergenic 40.0%
TCAGAAAAGTGGCATTTGTC+TGG - chr2_1:1901874-1901893 None:intergenic 40.0%
ATCTTTGTACAATCAGCAGG+GGG - chr2_1:1902126-1902145 None:intergenic 40.0%
GGAAGGAAAAATAGAGGGAT+GGG - chr2_1:1902230-1902249 None:intergenic 40.0%
AGGAAGGAAAAATAGAGGGA+TGG - chr2_1:1902231-1902250 None:intergenic 40.0%
TACAGACAACGAAGGAATGA+AGG - chr2_1:1902251-1902270 None:intergenic 40.0%
GTACAGATGTTCATAGGAGA+CGG + chr2_1:1902330-1902349 Msa0187210:intron 40.0%
! GTGACTTTTCTTTTGCGAGT+TGG - chr2_1:1902380-1902399 None:intergenic 40.0%
CTAATTGCAGTGAAGTGAGT+GGG + chr2_1:1902608-1902627 Msa0187210:intron 40.0%
TAATTGCAGTGAAGTGAGTG+GGG + chr2_1:1902609-1902628 Msa0187210:intron 40.0%
CTGATTGAGCAACTCTAACA+TGG - chr2_1:1902653-1902672 None:intergenic 40.0%
TAGCAGTGATGACCGAATTA+AGG + chr2_1:1902684-1902703 Msa0187210:CDS 40.0%
TAGCTCTTGCTTCTTCAGTT+GGG - chr2_1:1903103-1903122 None:intergenic 40.0%
TGCTCCATTGAAATCATCTG+TGG - chr2_1:1903284-1903303 None:intergenic 40.0%
TTTCAATGGAGCACAACTGA+AGG + chr2_1:1903291-1903310 Msa0187210:CDS 40.0%
AACAAACCTCAGTTGCATCA+CGG - chr2_1:1903351-1903370 None:intergenic 40.0%
CTTCATCATAATCCGAGCAT+AGG + chr2_1:1903746-1903765 Msa0187210:intron 40.0%
AAGGAAATTCCCACATCAAC+AGG - chr2_1:1904035-1904054 None:intergenic 40.0%
AACCACGAGGACTTTAATGA+AGG + chr2_1:1904084-1904103 Msa0187210:CDS 40.0%
TACCTTCATTAAAGTCCTCG+TGG - chr2_1:1904089-1904108 None:intergenic 40.0%
!!! TCTGCTCACGTTACCTTTTT+TGG + chr2_1:1904384-1904403 Msa0187210:intron 40.0%
CCAACAGAGATGACCAAAAA+AGG - chr2_1:1904400-1904419 None:intergenic 40.0%
!!! CCTTTTTTGGTCATCTCTGT+TGG + chr2_1:1904397-1904416 Msa0187210:intron 40.0%
! TGGTGGACCACCTTTAAATA+TGG - chr2_1:1904451-1904470 None:intergenic 40.0%
AGATGACAATGATGGTTGTG+TGG - chr2_1:1904693-1904712 None:intergenic 40.0%
TAACGACAACAGATTCACTC+TGG + chr2_1:1905016-1905035 Msa0187210:intron 40.0%
GATTCACTCTGGTAACATCA+TGG + chr2_1:1905027-1905046 Msa0187210:intron 40.0%
! TTTTATGGCCAACAGAGATC+AGG + chr2_1:1905164-1905183 Msa0187210:intron 40.0%
GAAGGAAGAAGATGAAGACA+GGG + chr2_1:1905431-1905450 Msa0187210:intron 40.0%
TTGTGTTAGACCAGTTGAGT+TGG + chr2_1:1905604-1905623 Msa0187210:intron 40.0%
TGTGTTAGACCAGTTGAGTT+GGG + chr2_1:1905605-1905624 Msa0187210:intron 40.0%
TGTAACATTGCACCATGAAC+TGG + chr2_1:1905752-1905771 Msa0187210:intron 40.0%
TAGCACAAGAATGGGTAACT+TGG + chr2_1:1905783-1905802 Msa0187210:intron 40.0%
TACCAGTTAGACCTCATATC+CGG - chr2_1:1905827-1905846 None:intergenic 40.0%
AGCATCATCATTCACGATTG+AGG + chr2_1:1905866-1905885 Msa0187210:intron 40.0%
CGAACCATAAACTTCCCAAA+TGG + chr2_1:1905901-1905920 Msa0187210:intron 40.0%
! GAAAGGCACATTTGACCATT+TGG - chr2_1:1905919-1905938 None:intergenic 40.0%
TGATACCAAGACAGCTAGAA+AGG - chr2_1:1905936-1905955 None:intergenic 40.0%
CTTGATTTCCTTCAAGCCAT+AGG + chr2_1:1906343-1906362 Msa0187210:intron 40.0%
GTAGAGAAAAGTTGGATCAG+TGG + chr2_1:1906370-1906389 Msa0187210:intron 40.0%
GTGTTTGCTTACTACAAGGA+TGG - chr2_1:1906398-1906417 Msa0187220:CDS 40.0%
CCTTGTGTTTGCTTACTACA+AGG - chr2_1:1906402-1906421 Msa0187220:CDS 40.0%
CCTTGTAGTAAGCAAACACA+AGG + chr2_1:1906399-1906418 Msa0187210:intron 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG + chr2_1:1906504-1906523 Msa0187210:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG + chr2_1:1906505-1906524 Msa0187210:intron 40.0%
TCTTCTTAACTTATGCCCCA+AGG + chr2_1:1906643-1906662 Msa0187210:intron 40.0%
CTTCTTAACTTATGCCCCAA+GGG + chr2_1:1906644-1906663 Msa0187210:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+GGG - chr2_1:1906661-1906680 Msa0187220:intron 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG - chr2_1:1906663-1906682 Msa0187220:intron 40.0%
!! TATTTGCAGTGGGTTGTTCA+AGG - chr2_1:1907035-1907054 Msa0187220:intron 40.0%
TCCATTCTCAATTTCCTTGC+AGG + chr2_1:1907189-1907208 Msa0187210:intron 40.0%
CCATTCTCAATTTCCTTGCA+GGG + chr2_1:1907190-1907209 Msa0187210:intron 40.0%
CATTCTCAATTTCCTTGCAG+GGG + chr2_1:1907191-1907210 Msa0187210:intron 40.0%
TGTTGTGTTTGTGTTGTGAC+AGG - chr2_1:1907440-1907459 Msa0187220:intron 40.0%
GTATACCAGGATCTTCTTAC+AGG - chr2_1:1907806-1907825 Msa0187220:CDS 40.0%
AAGATCCTGGTATACAAGCA+TGG + chr2_1:1907811-1907830 Msa0187210:intron 40.0%
TGTAACCATGCTTGTATACC+AGG - chr2_1:1907819-1907838 Msa0187220:exon 40.0%
TGAAGAGTTCAAGTGATGGT+AGG + chr2_1:1907954-1907973 Msa0187210:intron 40.0%
AGATGAGATGGCAAATGATC+AGG + chr2_1:1909233-1909252 Msa0187210:intron 40.0%
TCAACGTGTTATCCTCGAAT+AGG - chr2_1:1909683-1909702 None:intergenic 40.0%
!! GAAAGTATCAATCGGATGGA+GGG - chr2_1:1909944-1909963 None:intergenic 40.0%
!! AGAAAGTATCAATCGGATGG+AGG - chr2_1:1909945-1909964 None:intergenic 40.0%
!! AAGAGTGTTACTCCGCAAAT+GGG - chr2_1:1910045-1910064 None:intergenic 40.0%
!!! TGTGTTTTAGTCCGCTTTTG+GGG - chr2_1:1910119-1910138 None:intergenic 40.0%
AAGACGAATGTGTTCTATGC+CGG + chr2_1:1910149-1910168 Msa0187210:intron 40.0%
!! CAAATTCCAGAGGCTTTGAA+AGG - chr2_1:1910533-1910552 None:intergenic 40.0%
!! CTTTCAAAGCCTCTGGAATT+TGG + chr2_1:1910531-1910550 Msa0187210:intron 40.0%
AAAACTCAGCCAAATTCCAG+AGG - chr2_1:1910543-1910562 None:intergenic 40.0%
TCTTGTACTACCTGTTGATG+TGG + chr2_1:1910702-1910721 Msa0187210:intron 40.0%
CTTGTACTACCTGTTGATGT+GGG + chr2_1:1910703-1910722 Msa0187210:intron 40.0%
TTGTACTACCTGTTGATGTG+GGG + chr2_1:1910704-1910723 Msa0187210:intron 40.0%
! GACTTGCTTTCTTCTTTGCT+TGG - chr2_1:1910760-1910779 None:intergenic 40.0%
CGGTGCTCATATTCGCTAAT+TGG - chr2_1:1900356-1900375 None:intergenic 45.0%
! AGAAGCTCTGACGATATCGT+CGG - chr2_1:1900376-1900395 None:intergenic 45.0%
GGAAATGAATCCAGAAGACG+AGG + chr2_1:1901111-1901130 Msa0187210:CDS 45.0%
AAGGCCCCTAAAAACAGAAG+GGG - chr2_1:1901315-1901334 None:intergenic 45.0%
CTAAGGCCCCTAAAAACAGA+AGG - chr2_1:1901317-1901336 None:intergenic 45.0%
!!! CACCAGGTTTTAGCTTGTCA+GGG - chr2_1:1901465-1901484 None:intergenic 45.0%
!!! TCACCAGGTTTTAGCTTGTC+AGG - chr2_1:1901466-1901485 None:intergenic 45.0%
GAGGACTACAATGACATTGG+TGG + chr2_1:1901586-1901605 Msa0187210:CDS 45.0%
!! CATTGGTGGATTAGAGAAGC+AGG + chr2_1:1901600-1901619 Msa0187210:CDS 45.0%
TGGCCAGTGATATAACTGGA+TGG + chr2_1:1901671-1901690 Msa0187210:intron 45.0%
CGATGGCTTCAACCAATTCT+TGG - chr2_1:1901733-1901752 None:intergenic 45.0%
!! AAAGAGCGCTTCCAGAAGTT+AGG + chr2_1:1901770-1901789 Msa0187210:CDS 45.0%
GAGGACGAATTCCTAACTTC+TGG - chr2_1:1901784-1901803 None:intergenic 45.0%
TTAGGAATTCGTCCTCCCAA+GGG + chr2_1:1901788-1901807 Msa0187210:CDS 45.0%
!! CCATATAAGAGCACTCCCTT+GGG - chr2_1:1901806-1901825 None:intergenic 45.0%
!! ACCATATAAGAGCACTCCCT+TGG - chr2_1:1901807-1901826 None:intergenic 45.0%
TGCTCTTATATGGTCCACCA+GGG + chr2_1:1901813-1901832 Msa0187210:CDS 45.0%
!!! GCCACTTTTCTGAAGTTAGC+AGG + chr2_1:1901881-1901900 Msa0187210:CDS 45.0%
GCCTGCTAACTTCAGAAAAG+TGG - chr2_1:1901885-1901904 None:intergenic 45.0%
CAGATTCAGATGGTCATACC+TGG - chr2_1:1901919-1901938 None:intergenic 45.0%
GACAACGAAGGAATGAAGGA+AGG - chr2_1:1902247-1902266 None:intergenic 45.0%
!! TTGCGAGTTGGAAAGCATCA+CGG - chr2_1:1902368-1902387 None:intergenic 45.0%
GCTAATTGCAGTGAAGTGAG+TGG + chr2_1:1902607-1902626 Msa0187210:intron 45.0%
GAGTTGCTCAATCAGCTTGA+TGG + chr2_1:1902658-1902677 Msa0187210:CDS 45.0%
GGTGAGGAAACTCAATCTTG+CGG - chr2_1:1903082-1903101 None:intergenic 45.0%
! CTAGCTCTTGCTTCTTCAGT+TGG - chr2_1:1903104-1903123 None:intergenic 45.0%
AGCAAGAGCTAGAATTCTGC+AGG + chr2_1:1903112-1903131 Msa0187210:CDS 45.0%
GAGCTAGAATTCTGCAGGTT+TGG + chr2_1:1903117-1903136 Msa0187210:intron 45.0%
CGGTCCACAGATGATTTCAA+TGG + chr2_1:1903277-1903296 Msa0187210:CDS 45.0%
ACACACACACACACACACAA+TGG + chr2_1:1903716-1903735 Msa0187210:intron 45.0%
!!! CATAGGTTTTAGCTGCCCAT+TGG + chr2_1:1903763-1903782 Msa0187210:intron 45.0%
TCAAATGTAGGTGAACCACG+AGG + chr2_1:1904071-1904090 Msa0187210:intron 45.0%
! GGCTTGCTTTCTTCTTTGCT+TGG - chr2_1:1904122-1904141 None:intergenic 45.0%
GGTAACGTGAGCAGACATAA+GGG - chr2_1:1904379-1904398 None:intergenic 45.0%
AGGTAACGTGAGCAGACATA+AGG - chr2_1:1904380-1904399 None:intergenic 45.0%
! AGGTAGGGTGTTTGTCGATT+AGG + chr2_1:1904897-1904916 Msa0187210:intron 45.0%
ACGACGATGTTGAAGGAAGA+AGG - chr2_1:1904927-1904946 None:intergenic 45.0%
CAATTTGGGGACAACAATGG+TGG + chr2_1:1904980-1904999 Msa0187210:intron 45.0%
ACAATGGTGGCTTGAAGTCA+TGG + chr2_1:1904993-1905012 Msa0187210:intron 45.0%
TCACTCTGGTAACATCATGG+TGG + chr2_1:1905030-1905049 Msa0187210:intron 45.0%
GGAAGGAAGAAGATGAAGAC+AGG + chr2_1:1905430-1905449 Msa0187210:intron 45.0%
AACCGGATATGAGGTCTAAC+TGG + chr2_1:1905822-1905841 Msa0187210:intron 45.0%
! CACGATTGAGGTCTTTTCCT+AGG + chr2_1:1905878-1905897 Msa0187210:intron 45.0%
!! ATGTGCCTTTCTAGCTGTCT+TGG + chr2_1:1905928-1905947 Msa0187210:intron 45.0%
TTGTGTTTGGAAACGCAGCT+TGG - chr2_1:1906031-1906050 None:intergenic 45.0%
CTACTTTGCCTATGGCTTGA+AGG - chr2_1:1906354-1906373 Msa0187220:CDS 45.0%
!! CTCCTTAACTTGTGCCCTTA+GGG - chr2_1:1906522-1906541 Msa0187220:intron 45.0%
!! TCTCCTTAACTTGTGCCCTT+AGG - chr2_1:1906523-1906542 Msa0187220:intron 45.0%
GTTCCTTCTCCCTAAACTCA+AGG - chr2_1:1906772-1906791 Msa0187220:CDS 45.0%
TGTTGACACTTTCAGGCTTC+AGG - chr2_1:1906919-1906938 Msa0187220:CDS 45.0%
TGATGATCAAGCCGTCAAAG+TGG - chr2_1:1906949-1906968 Msa0187220:CDS 45.0%
GGAGCAGTGGATGTGAATAT+TGG - chr2_1:1907014-1907033 Msa0187220:CDS 45.0%
GAATGGAATGTTGTGGGAAG+TGG - chr2_1:1907176-1907195 Msa0187220:CDS 45.0%
CCCTGCAAGGAAATTGAGAA+TGG - chr2_1:1907193-1907212 Msa0187220:CDS 45.0%
GTTCTTCTTCCTGAAGCTTG+CGG + chr2_1:1909993-1910012 Msa0187210:intron 45.0%
TTTATCGTCCTCCCCATTTG+CGG + chr2_1:1910030-1910049 Msa0187210:intron 45.0%
! AGAGTGTTACTCCGCAAATG+GGG - chr2_1:1910044-1910063 None:intergenic 45.0%
!! GAAGAGTGTTACTCCGCAAA+TGG - chr2_1:1910046-1910065 None:intergenic 45.0%
!!! CCGACGTGGTTTTTTAGTGA+CGG - chr2_1:1910075-1910094 None:intergenic 45.0%
CCGTCACTAAAAAACCACGT+CGG + chr2_1:1910072-1910091 Msa0187210:intron 45.0%
!! TTTTAGTCCGCTTTTGGGGA+GGG - chr2_1:1910115-1910134 None:intergenic 45.0%
AGACGAATGTGTTCTATGCC+GGG + chr2_1:1910150-1910169 Msa0187210:intron 45.0%
! TGCTGAAAAGATTGGTGACC+CGG - chr2_1:1910171-1910190 None:intergenic 45.0%
GGTGGAGATGCTGAAAAGAT+TGG - chr2_1:1910179-1910198 None:intergenic 45.0%
!! GTTGGTAACGGAATGGAACT+CGG - chr2_1:1910203-1910222 None:intergenic 45.0%
!! GATGTAGGTTGGTAACGGAA+TGG - chr2_1:1910210-1910229 None:intergenic 45.0%
TCGATACCTTTCAAAGCCTC+TGG + chr2_1:1910524-1910543 Msa0187210:intron 45.0%
AAGGAAATCCCCACATCAAC+AGG - chr2_1:1910715-1910734 None:intergenic 45.0%
ACGATCTTGGCAAGCTACAT+AGG - chr2_1:1910947-1910966 None:intergenic 45.0%
!!! GTTTAATTATTTTATTTTTT+AGG - chr2_1:1904656-1904675 None:intergenic 5.0%
!!! TTATGTTTTATAATAAATTT+CGG - chr2_1:1910382-1910401 None:intergenic 5.0%
AATCGATATGGCGAGCGCAA+TGG + chr2_1:1900305-1900324 Msa0187210:exon 50.0%
CAACGAGATTCGCATCCTCA+AGG + chr2_1:1900407-1900426 Msa0187210:CDS 50.0%
TGATGTAGGAAGAGTCGCAG+AGG + chr2_1:1900537-1900556 Msa0187210:intron 50.0%
GGGTCAACAAGTCCAACAAC+TGG - chr2_1:1901445-1901464 None:intergenic 50.0%
GACCCTGACAAGCTAAAACC+TGG + chr2_1:1901460-1901479 Msa0187210:CDS 50.0%
GTGGGTCATTGGCAAAACGA+TGG - chr2_1:1901750-1901769 None:intergenic 50.0%
AAGCGCTCTTTGTGGGTCAT+TGG - chr2_1:1901761-1901780 None:intergenic 50.0%
!! CTTCTGGAAGCGCTCTTTGT+GGG - chr2_1:1901768-1901787 None:intergenic 50.0%
!! ACTTCTGGAAGCGCTCTTTG+TGG - chr2_1:1901769-1901788 None:intergenic 50.0%
GTTAGGAATTCGTCCTCCCA+AGG + chr2_1:1901787-1901806 Msa0187210:CDS 50.0%
!! TATAAGAGCACTCCCTTGGG+AGG - chr2_1:1901803-1901822 None:intergenic 50.0%
!! CCCAAGGGAGTGCTCTTATA+TGG + chr2_1:1901803-1901822 Msa0187210:CDS 50.0%
GTGCTCTTATATGGTCCACC+AGG + chr2_1:1901812-1901831 Msa0187210:CDS 50.0%
TTATATGGTCCACCAGGGAC+TGG + chr2_1:1901818-1901837 Msa0187210:CDS 50.0%
TATATGGTCCACCAGGGACT+GGG + chr2_1:1901819-1901838 Msa0187210:CDS 50.0%
! AAAGTTTTCCCAGTCCCTGG+TGG - chr2_1:1901830-1901849 None:intergenic 50.0%
CAATCGACCAGAACGCATGA+GGG - chr2_1:1903057-1903076 None:intergenic 50.0%
CTTGCTTCTTCAGTTGGGTG+AGG - chr2_1:1903098-1903117 None:intergenic 50.0%
ACTGAAGGCTGTCTGTGTTG+AGG + chr2_1:1903306-1903325 Msa0187210:CDS 50.0%
CACACACACACAATGGAGCA+TGG + chr2_1:1903723-1903742 Msa0187210:intron 50.0%
GGGCAGCTAAAACCTATGCT+CGG - chr2_1:1903761-1903780 None:intergenic 50.0%
ATAAGGTGATCGATGGAGGG+CGG + chr2_1:1904850-1904869 Msa0187210:intron 50.0%
! GTAACATCATGGTGGTGCAG+CGG + chr2_1:1905038-1905057 Msa0187210:intron 50.0%
ATCAGGTGTGTGGCTAAGAG+TGG + chr2_1:1905181-1905200 Msa0187210:intron 50.0%
TCAGGTGTGTGGCTAAGAGT+GGG + chr2_1:1905182-1905201 Msa0187210:intron 50.0%
!! GTTAGACCAGTTGAGTTGGG+AGG + chr2_1:1905608-1905627 Msa0187210:intron 50.0%
CATGATCCTCCCAACTCAAC+TGG - chr2_1:1905617-1905636 None:intergenic 50.0%
GGGAAGTTTATGGTTCGCCT+AGG - chr2_1:1905898-1905917 None:intergenic 50.0%
! TGCCCTAAGGGCACAAGTTA+AGG + chr2_1:1906517-1906536 Msa0187210:intron 50.0%
GGTCCTTGAGTTTAGGGAGA+AGG + chr2_1:1906766-1906785 Msa0187210:intron 50.0%
GGGAAGTGGAAGGAAAGGTT+AGG - chr2_1:1907162-1907181 Msa0187220:intron 50.0%
GTTGTGGGAAGTGGAAGGAA+AGG - chr2_1:1907167-1907186 Msa0187220:CDS 50.0%
GGAATGTTGTGGGAAGTGGA+AGG - chr2_1:1907172-1907191 Msa0187220:CDS 50.0%
GAAAGGAAGCTCACGAGACT+AGG - chr2_1:1909866-1909885 None:intergenic 50.0%
! TTTGTTGTGCCGCAAGCTTC+AGG - chr2_1:1910005-1910024 None:intergenic 50.0%
TGTATCTCCCTCCCCAAAAG+CGG + chr2_1:1910105-1910124 Msa0187210:intron 50.0%
!! GTTTTAGTCCGCTTTTGGGG+AGG - chr2_1:1910116-1910135 None:intergenic 50.0%
AGAGTCGCAGAGGACGAATC+TGG + chr2_1:1900547-1900566 Msa0187210:CDS 55.0%
! GCAGAGGACGAATCTGGAGT+TGG + chr2_1:1900553-1900572 Msa0187210:CDS 55.0%
GAATCCAGAAGACGAGGCTG+AGG + chr2_1:1901117-1901136 Msa0187210:CDS 55.0%
TCTTCCTCAGCCTCGTCTTC+TGG - chr2_1:1901124-1901143 None:intergenic 55.0%
GAAGACGAGGCTGAGGAAGA+TGG + chr2_1:1901124-1901143 Msa0187210:CDS 55.0%
GTCATACCTGGACCAGCTGA+GGG - chr2_1:1901907-1901926 None:intergenic 55.0%
CAGTGAAGTGAGTGGGGACA+GGG + chr2_1:1902615-1902634 Msa0187210:intron 55.0%
CCAATCGACCAGAACGCATG+AGG - chr2_1:1903058-1903077 None:intergenic 55.0%
CCTCATGCGTTCTGGTCGAT+TGG + chr2_1:1903055-1903074 Msa0187210:CDS 55.0%
AAGGCTGTCTGTGTTGAGGC+TGG + chr2_1:1903310-1903329 Msa0187210:CDS 55.0%
CTGTGTTGAGGCTGGCATGT+TGG + chr2_1:1903318-1903337 Msa0187210:CDS 55.0%
TCTACGCCGTGATGCAACTG+AGG + chr2_1:1903342-1903361 Msa0187210:CDS 55.0%
GCCAACAGAGATCAGGTGTG+TGG + chr2_1:1905171-1905190 Msa0187210:intron 55.0%
GCCACACACCTGATCTCTGT+TGG - chr2_1:1905175-1905194 None:intergenic 55.0%
GGGAGGATCATGTGTCTGTC+TGG + chr2_1:1905625-1905644 Msa0187210:intron 55.0%
! GGGGAGAGCATGCATGATGA+TGG - chr2_1:1906428-1906447 Msa0187220:CDS 55.0%
GGTGCTAACCCTTCTGCAGA+GGG - chr2_1:1906993-1907012 Msa0187220:CDS 55.0%
! TGGTGCTAACCCTTCTGCAG+AGG - chr2_1:1906994-1907013 Msa0187220:CDS 55.0%
! GTGGGTTGTTCAAGGAGCAG+TGG - chr2_1:1907027-1907046 Msa0187220:intron 55.0%
CTCTGACTCATTCCCCTGCA+AGG - chr2_1:1907206-1907225 Msa0187220:CDS 55.0%
! GTGTTACTCCGCAAATGGGG+AGG - chr2_1:1910041-1910060 None:intergenic 55.0%
TACACAGTGCTTTGCCGACG+TGG - chr2_1:1910089-1910108 None:intergenic 55.0%
AACGGAATGGAACTCGGAGG+TGG - chr2_1:1910197-1910216 None:intergenic 55.0%
!! GGTAACGGAATGGAACTCGG+AGG - chr2_1:1910200-1910219 None:intergenic 55.0%
TTGTCTGGGCTGCACAGGCA+CGG - chr2_1:1901859-1901878 None:intergenic 60.0%
GGCATTTGTCTGGGCTGCAC+AGG - chr2_1:1901864-1901883 None:intergenic 60.0%
GAAGTTAGCAGGCCCTCAGC+TGG + chr2_1:1901892-1901911 Msa0187210:CDS 60.0%
GGTCATACCTGGACCAGCTG+AGG - chr2_1:1901908-1901927 None:intergenic 60.0%
GCAGTGAAGTGAGTGGGGAC+AGG + chr2_1:1902614-1902633 Msa0187210:intron 60.0%
TGAAGTGAGTGGGGACAGGG+AGG + chr2_1:1902618-1902637 Msa0187210:CDS 60.0%
GATCCTGCCCTCATGCGTTC+TGG + chr2_1:1903047-1903066 Msa0187210:CDS 60.0%
GGTGTGTGGCTAAGAGTGGG+CGG + chr2_1:1905185-1905204 Msa0187210:intron 60.0%
TAAGAGTGGGCGGCGATGGT+GGG + chr2_1:1905195-1905214 Msa0187210:intron 60.0%
! ACGCAGCTTGGCGCATTGGT+CGG - chr2_1:1906019-1906038 None:intergenic 60.0%
GGAAACGCAGCTTGGCGCAT+TGG - chr2_1:1906023-1906042 None:intergenic 60.0%
GAGGGTGGAGACGAGGATGA+CGG - chr2_1:1906975-1906994 Msa0187220:CDS 60.0%
TTCTGCAGAGGGTGGAGACG+AGG - chr2_1:1906982-1907001 Msa0187220:CDS 60.0%
TCGTCTCCACCCTCTGCAGA+AGG + chr2_1:1906981-1907000 Msa0187210:intron 60.0%
CGTCTCCACCCTCTGCAGAA+GGG + chr2_1:1906982-1907001 Msa0187210:intron 60.0%
GCTAACCCTTCTGCAGAGGG+TGG - chr2_1:1906990-1907009 Msa0187220:CDS 60.0%
TGTCTGGGCTGCACAGGCAC+GGG - chr2_1:1901858-1901877 None:intergenic 65.0%
CGACCAGAACGCATGAGGGC+AGG - chr2_1:1903053-1903072 None:intergenic 65.0%
TGGCTAAGAGTGGGCGGCGA+TGG + chr2_1:1905191-1905210 Msa0187210:intron 65.0%
CTAAGAGTGGGCGGCGATGG+TGG + chr2_1:1905194-1905213 Msa0187210:intron 65.0%
AGCAGGCCCTCAGCTGGTCC+AGG + chr2_1:1901898-1901917 Msa0187210:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 1900069 1911005 1900069 ID=Msa0187210;Name=Msa0187210
chr2_1 mRNA 1900069 1911005 1900069 ID=Msa0187210-mRNA-1;Parent=Msa0187210;Name=Msa0187210-mRNA-1;_AED=0.14;_eAED=0.14;_QI=221|1|1|1|0.75|0.61|13|176|423
chr2_1 exon 1900069 1900232 1900069 ID=Msa0187210-mRNA-1:exon:883;Parent=Msa0187210-mRNA-1
chr2_1 exon 1900255 1900428 1900255 ID=Msa0187210-mRNA-1:exon:884;Parent=Msa0187210-mRNA-1
chr2_1 exon 1900545 1900661 1900545 ID=Msa0187210-mRNA-1:exon:885;Parent=Msa0187210-mRNA-1
chr2_1 exon 1901106 1901213 1901106 ID=Msa0187210-mRNA-1:exon:886;Parent=Msa0187210-mRNA-1
chr2_1 exon 1901430 1901621 1901430 ID=Msa0187210-mRNA-1:exon:887;Parent=Msa0187210-mRNA-1
chr2_1 exon 1901728 1901919 1901728 ID=Msa0187210-mRNA-1:exon:888;Parent=Msa0187210-mRNA-1
chr2_1 exon 1902336 1902454 1902336 ID=Msa0187210-mRNA-1:exon:889;Parent=Msa0187210-mRNA-1
chr2_1 exon 1902618 1902705 1902618 ID=Msa0187210-mRNA-1:exon:890;Parent=Msa0187210-mRNA-1
chr2_1 exon 1903014 1903133 1903014 ID=Msa0187210-mRNA-1:exon:891;Parent=Msa0187210-mRNA-1
chr2_1 exon 1903223 1903363 1903223 ID=Msa0187210-mRNA-1:exon:892;Parent=Msa0187210-mRNA-1
chr2_1 exon 1904081 1904233 1904081 ID=Msa0187210-mRNA-1:exon:893;Parent=Msa0187210-mRNA-1
chr2_1 exon 1904260 1904292 1904260 ID=Msa0187210-mRNA-1:exon:894;Parent=Msa0187210-mRNA-1
chr2_1 exon 1910938 1911005 1910938 ID=Msa0187210-mRNA-1:exon:895;Parent=Msa0187210-mRNA-1
chr2_1 five_prime_UTR 1900069 1900232 1900069 ID=Msa0187210-mRNA-1:five_prime_utr;Parent=Msa0187210-mRNA-1
chr2_1 five_prime_UTR 1900255 1900311 1900255 ID=Msa0187210-mRNA-1:five_prime_utr;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1900312 1900428 1900312 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1900545 1900661 1900545 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1901106 1901213 1901106 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1901430 1901621 1901430 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1901728 1901919 1901728 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1902336 1902454 1902336 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1902618 1902705 1902618 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1903014 1903133 1903014 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1903223 1903363 1903223 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 CDS 1904081 1904158 1904081 ID=Msa0187210-mRNA-1:cds;Parent=Msa0187210-mRNA-1
chr2_1 three_prime_UTR 1904159 1904233 1904159 ID=Msa0187210-mRNA-1:three_prime_utr;Parent=Msa0187210-mRNA-1
chr2_1 three_prime_UTR 1904260 1904292 1904260 ID=Msa0187210-mRNA-1:three_prime_utr;Parent=Msa0187210-mRNA-1
chr2_1 three_prime_UTR 1910938 1911005 1910938 ID=Msa0187210-mRNA-1:three_prime_utr;Parent=Msa0187210-mRNA-1
Gene Sequence

>Msa0187210

ATGGCGAGCGCAATGGTAGAAGATGCTAACTTTGAAGATGACCAATTAGCGAATATGAGCACCGACGATATCGTCAGAGCTTCTCGTCTTCTCGACAACGAGATTCGCATCCTCAAGGAAGAGTCGCAGAGGACGAATCTGGAGTTGGAATCGTATAAAGAGAAGATTAAAGAGAATCAAGAGAAAATTAAGCTTAATAAACAATTACCCTATCTTGTTGGTAACATTGTTGAGATATTGGAAATGAATCCAGAAGACGAGGCTGAGGAAGATGGTGCCAATATTGATCTTGACTCACAAAGGAAGGGAAAATGTGTTGTGCTAAAAACATCTACTCGACAGACAATCTTTCTTCCAGTTGTTGGACTTGTTGACCCTGACAAGCTAAAACCTGGTGATCTTGTTGGTGTAAACAAAGATAGTTACTTAATCTTGGATACTCTGCCTTCTGAGTATGATTCTAGAGTTAAGGCCATGGAAGTTGATGAAAAGCCAACAGAGGACTACAATGACATTGGTGGATTAGAGAAGCAGATCCAAGAATTGGTTGAAGCCATCGTTTTGCCAATGACCCACAAAGAGCGCTTCCAGAAGTTAGGAATTCGTCCTCCCAAGGGAGTGCTCTTATATGGTCCACCAGGGACTGGGAAAACTTTAATGGCCCGTGCCTGTGCAGCCCAGACAAATGCCACTTTTCTGAAGTTAGCAGGCCCTCAGCTGGTCCAGATGTTCATAGGAGACGGAGCAAAACTTGTCCGTGATGCTTTCCAACTCGCAAAAGAAAAGTCACCATGCATTATATTTATAGATGAAATCGATGCAATTGGTACAAAGCGTTTTGATAGTGAAGTGAGTGGGGACAGGGAGGTTCAAAGAACCATGTTAGAGTTGCTCAATCAGCTTGATGGTTTTAGCAGTGATGACCGAATTAAGGTGATAGCAGCAACAAATCGTGCAGATATTCTTGATCCTGCCCTCATGCGTTCTGGTCGATTGGACCGCAAGATTGAGTTTCCTCACCCAACTGAAGAAGCAAGAGCTAGAATTCTGCAGATCCATTCAAGGAAGATGAATGTTCACCCAGATGTAAATTTTGAAGAACTAGCTCGGTCCACAGATGATTTCAATGGAGCACAACTGAAGGCTGTCTGTGTTGAGGCTGGCATGTTGGCTCTACGCCGTGATGCAACTGAGGTGAACCACGAGGACTTTAATGAAGGTATAATTCAAGTCCAAGCAAAGAAGAAAGCAAGCCTGAACTATTATGCTTAA
Protein sequence

>Msa0187210

MASAMVEDANFEDDQLANMSTDDIVRASRLLDNEIRILKEESQRTNLELESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA*